HEADER IMMUNE SYSTEM 17-DEC-14 4XC2 TITLE CRYSTAL STRUCTURE OF GABARAP IN COMPLEX WITH KBTBD6 LIR PEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: GABA(A) RECEPTOR-ASSOCIATED PROTEIN; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: UNP RESIDUES 3-116; COMPND 5 SYNONYM: GABARAP PROTEIN,HCG1987397,ISOFORM CRA_B; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: KELCH REPEAT AND BTB DOMAIN-CONTAINING PROTEIN 6; COMPND 9 CHAIN: E, F, G, H; COMPND 10 FRAGMENT: UNP RESIDUES 663-673; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: GABARAP, HCG_1987397; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606 KEYWDS AUTOPHAGY, COMPLEX, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR J.HUBER,H.M.GENAU,F.BASCHIERI,V.DOETSCH,H.FARHAN,V.V.ROGOV, AUTHOR 2 C.BEHRENDS,M.AKUTSU REVDAT 5 10-JAN-24 4XC2 1 REMARK REVDAT 4 06-SEP-17 4XC2 1 ATOM REVDAT 3 26-OCT-16 4XC2 1 AUTHOR REVDAT 2 01-APR-15 4XC2 1 JRNL REVDAT 1 04-MAR-15 4XC2 0 JRNL AUTH H.M.GENAU,J.HUBER,F.BASCHIERI,M.AKUTSU,V.DOTSCH,H.FARHAN, JRNL AUTH 2 V.ROGOV,C.BEHRENDS JRNL TITL CUL3-KBTBD6/KBTBD7 UBIQUITIN LIGASE COOPERATES WITH GABARAP JRNL TITL 2 PROTEINS TO SPATIALLY RESTRICT TIAM1-RAC1 SIGNALING. JRNL REF MOL.CELL V. 57 995 2015 JRNL REFN ISSN 1097-2765 JRNL PMID 25684205 JRNL DOI 10.1016/J.MOLCEL.2014.12.040 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0029 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.73 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 92.7 REMARK 3 NUMBER OF REFLECTIONS : 35614 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.201 REMARK 3 R VALUE (WORKING SET) : 0.198 REMARK 3 FREE R VALUE : 0.258 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1881 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2632 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 91.62 REMARK 3 BIN R VALUE (WORKING SET) : 0.3480 REMARK 3 BIN FREE R VALUE SET COUNT : 134 REMARK 3 BIN FREE R VALUE : 0.3660 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4254 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 187 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.19 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 5.04000 REMARK 3 B22 (A**2) : -1.19000 REMARK 3 B33 (A**2) : -2.04000 REMARK 3 B12 (A**2) : 0.47000 REMARK 3 B13 (A**2) : 0.75000 REMARK 3 B23 (A**2) : 0.96000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.197 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.181 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.153 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.492 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.966 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.940 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4393 ; 0.009 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 4142 ; 0.000 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5927 ; 1.162 ; 1.957 REMARK 3 BOND ANGLES OTHERS (DEGREES): 9549 ; 0.635 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 504 ; 7.857 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 234 ;29.437 ;22.991 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 757 ;17.586 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 36 ;15.396 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 602 ; 0.079 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4878 ; 0.014 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1074 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 4XC2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 18-DEC-14. REMARK 100 THE DEPOSITION ID IS D_1000205417. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-JUL-14 REMARK 200 TEMPERATURE (KELVIN) : 77 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 37496 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 37.750 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.7 REMARK 200 DATA REDUNDANCY : 2.500 REMARK 200 R MERGE (I) : 0.04300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 91.0 REMARK 200 DATA REDUNDANCY IN SHELL : 2.40 REMARK 200 R MERGE FOR SHELL (I) : 0.36500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 3D32 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.75 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.19 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M AMMONIUM ACETATE, 0.01 M REMARK 280 MAGNESIUM ACETATE TETRAHYDRATE, 30% POLY ETHYLENE GLYCOL 8000, REMARK 280 0.1 M TRIS-HCL, PH 8.0, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1400 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 7230 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -6.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1450 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 7170 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -5.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1460 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 7190 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -6.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1430 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 7040 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -5.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 0 REMARK 465 ALA C 0 REMARK 465 MET C 1 REMARK 465 ALA D 0 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET D 1 CG SD CE REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS B 69 43.18 73.62 REMARK 500 ASN B 81 43.85 35.02 REMARK 500 ASN B 82 17.76 80.28 REMARK 500 LYS C 38 6.62 81.56 REMARK 500 ASP G 664 118.10 -39.19 REMARK 500 REMARK 500 REMARK: NULL DBREF 4XC2 A 3 116 UNP Q6IAW1 Q6IAW1_HUMAN 3 116 DBREF 4XC2 B 3 116 UNP Q6IAW1 Q6IAW1_HUMAN 3 116 DBREF 4XC2 C 3 116 UNP Q6IAW1 Q6IAW1_HUMAN 3 116 DBREF 4XC2 D 3 116 UNP Q6IAW1 Q6IAW1_HUMAN 3 116 DBREF 4XC2 E 663 673 UNP Q86V97 KBTB6_HUMAN 663 673 DBREF 4XC2 F 663 673 UNP Q86V97 KBTB6_HUMAN 663 673 DBREF 4XC2 G 663 673 UNP Q86V97 KBTB6_HUMAN 663 673 DBREF 4XC2 H 663 673 UNP Q86V97 KBTB6_HUMAN 663 673 SEQADV 4XC2 ALA A 0 UNP Q6IAW1 EXPRESSION TAG SEQADV 4XC2 MET A 1 UNP Q6IAW1 EXPRESSION TAG SEQADV 4XC2 GLY A 2 UNP Q6IAW1 EXPRESSION TAG SEQADV 4XC2 ALA B 0 UNP Q6IAW1 EXPRESSION TAG SEQADV 4XC2 MET B 1 UNP Q6IAW1 EXPRESSION TAG SEQADV 4XC2 GLY B 2 UNP Q6IAW1 EXPRESSION TAG SEQADV 4XC2 ALA C 0 UNP Q6IAW1 EXPRESSION TAG SEQADV 4XC2 MET C 1 UNP Q6IAW1 EXPRESSION TAG SEQADV 4XC2 GLY C 2 UNP Q6IAW1 EXPRESSION TAG SEQADV 4XC2 ALA D 0 UNP Q6IAW1 EXPRESSION TAG SEQADV 4XC2 MET D 1 UNP Q6IAW1 EXPRESSION TAG SEQADV 4XC2 GLY D 2 UNP Q6IAW1 EXPRESSION TAG SEQRES 1 A 117 ALA MET GLY PHE VAL TYR LYS GLU GLU HIS PRO PHE GLU SEQRES 2 A 117 LYS ARG ARG SER GLU GLY GLU LYS ILE ARG LYS LYS TYR SEQRES 3 A 117 PRO ASP ARG VAL PRO VAL ILE VAL GLU LYS ALA PRO LYS SEQRES 4 A 117 ALA ARG ILE GLY ASP LEU ASP LYS LYS LYS TYR LEU VAL SEQRES 5 A 117 PRO SER ASP LEU THR VAL GLY GLN PHE TYR PHE LEU ILE SEQRES 6 A 117 ARG LYS ARG ILE HIS LEU ARG ALA GLU ASP ALA LEU PHE SEQRES 7 A 117 PHE PHE VAL ASN ASN VAL ILE PRO PRO THR SER ALA THR SEQRES 8 A 117 MET GLY GLN LEU TYR GLN GLU HIS HIS GLU GLU ASP PHE SEQRES 9 A 117 PHE LEU TYR ILE ALA TYR SER ASP GLU SER VAL TYR GLY SEQRES 1 B 117 ALA MET GLY PHE VAL TYR LYS GLU GLU HIS PRO PHE GLU SEQRES 2 B 117 LYS ARG ARG SER GLU GLY GLU LYS ILE ARG LYS LYS TYR SEQRES 3 B 117 PRO ASP ARG VAL PRO VAL ILE VAL GLU LYS ALA PRO LYS SEQRES 4 B 117 ALA ARG ILE GLY ASP LEU ASP LYS LYS LYS TYR LEU VAL SEQRES 5 B 117 PRO SER ASP LEU THR VAL GLY GLN PHE TYR PHE LEU ILE SEQRES 6 B 117 ARG LYS ARG ILE HIS LEU ARG ALA GLU ASP ALA LEU PHE SEQRES 7 B 117 PHE PHE VAL ASN ASN VAL ILE PRO PRO THR SER ALA THR SEQRES 8 B 117 MET GLY GLN LEU TYR GLN GLU HIS HIS GLU GLU ASP PHE SEQRES 9 B 117 PHE LEU TYR ILE ALA TYR SER ASP GLU SER VAL TYR GLY SEQRES 1 C 117 ALA MET GLY PHE VAL TYR LYS GLU GLU HIS PRO PHE GLU SEQRES 2 C 117 LYS ARG ARG SER GLU GLY GLU LYS ILE ARG LYS LYS TYR SEQRES 3 C 117 PRO ASP ARG VAL PRO VAL ILE VAL GLU LYS ALA PRO LYS SEQRES 4 C 117 ALA ARG ILE GLY ASP LEU ASP LYS LYS LYS TYR LEU VAL SEQRES 5 C 117 PRO SER ASP LEU THR VAL GLY GLN PHE TYR PHE LEU ILE SEQRES 6 C 117 ARG LYS ARG ILE HIS LEU ARG ALA GLU ASP ALA LEU PHE SEQRES 7 C 117 PHE PHE VAL ASN ASN VAL ILE PRO PRO THR SER ALA THR SEQRES 8 C 117 MET GLY GLN LEU TYR GLN GLU HIS HIS GLU GLU ASP PHE SEQRES 9 C 117 PHE LEU TYR ILE ALA TYR SER ASP GLU SER VAL TYR GLY SEQRES 1 D 117 ALA MET GLY PHE VAL TYR LYS GLU GLU HIS PRO PHE GLU SEQRES 2 D 117 LYS ARG ARG SER GLU GLY GLU LYS ILE ARG LYS LYS TYR SEQRES 3 D 117 PRO ASP ARG VAL PRO VAL ILE VAL GLU LYS ALA PRO LYS SEQRES 4 D 117 ALA ARG ILE GLY ASP LEU ASP LYS LYS LYS TYR LEU VAL SEQRES 5 D 117 PRO SER ASP LEU THR VAL GLY GLN PHE TYR PHE LEU ILE SEQRES 6 D 117 ARG LYS ARG ILE HIS LEU ARG ALA GLU ASP ALA LEU PHE SEQRES 7 D 117 PHE PHE VAL ASN ASN VAL ILE PRO PRO THR SER ALA THR SEQRES 8 D 117 MET GLY GLN LEU TYR GLN GLU HIS HIS GLU GLU ASP PHE SEQRES 9 D 117 PHE LEU TYR ILE ALA TYR SER ASP GLU SER VAL TYR GLY SEQRES 1 E 11 SER ASP ASP ASP PHE TRP VAL ARG VAL ALA PRO SEQRES 1 F 11 SER ASP ASP ASP PHE TRP VAL ARG VAL ALA PRO SEQRES 1 G 11 SER ASP ASP ASP PHE TRP VAL ARG VAL ALA PRO SEQRES 1 H 11 SER ASP ASP ASP PHE TRP VAL ARG VAL ALA PRO FORMUL 9 HOH *187(H2 O) HELIX 1 AA1 PHE A 3 HIS A 9 1 7 HELIX 2 AA2 PRO A 10 TYR A 25 1 16 HELIX 3 AA3 THR A 56 HIS A 69 1 14 HELIX 4 AA4 THR A 90 HIS A 99 1 10 HELIX 5 AA5 PHE B 3 HIS B 9 1 7 HELIX 6 AA6 PRO B 10 TYR B 25 1 16 HELIX 7 AA7 THR B 56 ILE B 68 1 13 HELIX 8 AA8 THR B 90 HIS B 99 1 10 HELIX 9 AA9 PHE C 3 HIS C 9 1 7 HELIX 10 AB1 PRO C 10 TYR C 25 1 16 HELIX 11 AB2 THR C 56 HIS C 69 1 14 HELIX 12 AB3 THR C 90 HIS C 99 1 10 HELIX 13 AB4 PHE D 3 HIS D 9 1 7 HELIX 14 AB5 PRO D 10 TYR D 25 1 16 HELIX 15 AB6 THR D 56 ILE D 68 1 13 HELIX 16 AB7 THR D 90 HIS D 99 1 10 SHEET 1 AA1 5 PHE A 77 PHE A 79 0 SHEET 2 AA1 5 LEU A 105 SER A 110 -1 O ALA A 108 N PHE A 79 SHEET 3 AA1 5 ARG A 28 LYS A 35 1 N ILE A 32 O ILE A 107 SHEET 4 AA1 5 LYS A 48 PRO A 52 -1 O TYR A 49 N VAL A 31 SHEET 5 AA1 5 VAL E 669 ARG E 670 1 O VAL E 669 N LYS A 48 SHEET 1 AA2 6 VAL A 114 TYR A 115 0 SHEET 2 AA2 6 TRP H 668 ARG H 670 1 O ARG H 670 N TYR A 115 SHEET 3 AA2 6 LYS D 48 PRO D 52 1 N LEU D 50 O VAL H 669 SHEET 4 AA2 6 ARG D 28 LYS D 35 -1 N VAL D 31 O TYR D 49 SHEET 5 AA2 6 LEU D 105 SER D 110 1 O ILE D 107 N ILE D 32 SHEET 6 AA2 6 PHE D 77 PHE D 79 -1 N PHE D 79 O ALA D 108 SHEET 1 AA3 5 PHE B 77 PHE B 79 0 SHEET 2 AA3 5 LEU B 105 SER B 110 -1 O ALA B 108 N PHE B 79 SHEET 3 AA3 5 ARG B 28 LYS B 35 1 N ILE B 32 O LEU B 105 SHEET 4 AA3 5 LYS B 48 PRO B 52 -1 O TYR B 49 N VAL B 31 SHEET 5 AA3 5 VAL F 669 ARG F 670 1 O VAL F 669 N LYS B 48 SHEET 1 AA4 6 VAL B 114 TYR B 115 0 SHEET 2 AA4 6 TRP G 668 ARG G 670 1 O TRP G 668 N TYR B 115 SHEET 3 AA4 6 LYS C 48 PRO C 52 1 N LYS C 48 O VAL G 669 SHEET 4 AA4 6 ARG C 28 LYS C 35 -1 N VAL C 29 O VAL C 51 SHEET 5 AA4 6 LEU C 105 SER C 110 1 O LEU C 105 N ILE C 32 SHEET 6 AA4 6 PHE C 77 PHE C 79 -1 N PHE C 79 O ALA C 108 CRYST1 38.893 57.353 67.310 65.30 77.34 89.95 P 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.025712 -0.000021 -0.006379 0.00000 SCALE2 0.000000 0.017436 -0.008260 0.00000 SCALE3 0.000000 0.000000 0.016849 0.00000