HEADER HYDROLASE 18-DEC-14 4XCM TITLE CRYSTAL STRUCTURE OF THE PUTATIVE NLPC/P60 D,L ENDOPEPTIDASE FROM T. TITLE 2 THERMOPHILUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: CELL WALL-BINDING ENDOPEPTIDASE-RELATED PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 15-258; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS HB8; SOURCE 3 ORGANISM_TAXID: 300852; SOURCE 4 GENE: TTHA0266; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VARIANT: ROSETTA2 KEYWDS NLPC/P60, D, L-ENDOPEPTIDASE, LYSM DOMAIN, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR J.WONG,S.MIDTGAARD,K.GYSEL,M.B.THYGESEN,K.K.SORENSEN,K.J.JENSEN, AUTHOR 2 J.STOUGAARD,S.THIRUP,M.BLAISE REVDAT 5 23-OCT-24 4XCM 1 REMARK REVDAT 4 17-JAN-18 4XCM 1 REMARK REVDAT 3 20-JUL-16 4XCM 1 JRNL REVDAT 2 11-MAR-15 4XCM 1 JRNL REVDAT 1 14-JAN-15 4XCM 0 JRNL AUTH J.E.WONG,S.R.MIDTGAARD,K.GYSEL,M.B.THYGESEN,K.K.SRENSEN, JRNL AUTH 2 K.J.JENSEN,J.STOUGAARD,S.THIRUP,M.BLAISE JRNL TITL AN INTERMOLECULAR BINDING MECHANISM INVOLVING MULTIPLE LYSM JRNL TITL 2 DOMAINS MEDIATES CARBOHYDRATE RECOGNITION BY AN JRNL TITL 3 ENDOPEPTIDASE. JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 71 592 2015 JRNL REFN ESSN 1399-0047 JRNL PMID 25760608 JRNL DOI 10.1107/S139900471402793X REMARK 2 REMARK 2 RESOLUTION. 2.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8_1069) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.58 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.390 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 32875 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.199 REMARK 3 R VALUE (WORKING SET) : 0.194 REMARK 3 FREE R VALUE : 0.238 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.090 REMARK 3 FREE R VALUE TEST SET COUNT : 3316 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.5858 - 7.6026 0.99 1208 148 0.1747 0.1932 REMARK 3 2 7.6026 - 6.0514 1.00 1247 132 0.1824 0.2230 REMARK 3 3 6.0514 - 5.2914 1.00 1234 128 0.1828 0.1834 REMARK 3 4 5.2914 - 4.8098 1.00 1217 141 0.1451 0.1897 REMARK 3 5 4.8098 - 4.4663 1.00 1229 138 0.1392 0.1691 REMARK 3 6 4.4663 - 4.2038 1.00 1225 140 0.1649 0.1849 REMARK 3 7 4.2038 - 3.9938 1.00 1248 136 0.1716 0.2394 REMARK 3 8 3.9938 - 3.8203 1.00 1230 140 0.1883 0.2115 REMARK 3 9 3.8203 - 3.6735 1.00 1274 152 0.1980 0.2672 REMARK 3 10 3.6735 - 3.5470 1.00 1197 138 0.1996 0.2714 REMARK 3 11 3.5470 - 3.4362 1.00 1221 134 0.2195 0.3039 REMARK 3 12 3.4362 - 3.3382 1.00 1254 142 0.2081 0.2511 REMARK 3 13 3.3382 - 3.2504 1.00 1185 128 0.2360 0.2942 REMARK 3 14 3.2504 - 3.1712 1.00 1281 144 0.2303 0.2990 REMARK 3 15 3.1712 - 3.0992 1.00 1196 140 0.2338 0.3557 REMARK 3 16 3.0992 - 3.0333 1.00 1271 133 0.2482 0.3149 REMARK 3 17 3.0333 - 2.9727 1.00 1209 144 0.2476 0.2954 REMARK 3 18 2.9727 - 2.9166 1.00 1234 148 0.2543 0.3782 REMARK 3 19 2.9166 - 2.8646 1.00 1185 122 0.2792 0.3305 REMARK 3 20 2.8646 - 2.8160 1.00 1289 140 0.2727 0.3563 REMARK 3 21 2.8160 - 2.7707 1.00 1252 140 0.2592 0.3443 REMARK 3 22 2.7707 - 2.7281 1.00 1230 146 0.2634 0.3351 REMARK 3 23 2.7281 - 2.6880 1.00 1191 126 0.0000 0.0000 REMARK 3 24 2.6880 - 2.6501 1.00 1252 136 0.3050 0.3269 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.320 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.730 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 3134 REMARK 3 ANGLE : 0.706 4262 REMARK 3 CHIRALITY : 0.044 470 REMARK 3 PLANARITY : 0.004 555 REMARK 3 DIHEDRAL : 13.630 1169 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 17 THROUGH 59 ) REMARK 3 ORIGIN FOR THE GROUP (A): -51.0697 -17.6172 -4.5884 REMARK 3 T TENSOR REMARK 3 T11: 0.8095 T22: 0.7224 REMARK 3 T33: 0.7158 T12: -0.2029 REMARK 3 T13: -0.0869 T23: -0.1181 REMARK 3 L TENSOR REMARK 3 L11: 3.4154 L22: 9.1943 REMARK 3 L33: 10.1269 L12: 3.4156 REMARK 3 L13: 5.0244 L23: 5.4354 REMARK 3 S TENSOR REMARK 3 S11: 0.8270 S12: 0.0872 S13: -1.2441 REMARK 3 S21: 1.1720 S22: -0.1427 S23: -0.4224 REMARK 3 S31: 1.4915 S32: -0.3203 S33: -0.6334 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 60 THROUGH 129 ) REMARK 3 ORIGIN FOR THE GROUP (A): -47.6647 -2.8125 -8.5911 REMARK 3 T TENSOR REMARK 3 T11: 1.1366 T22: 0.8596 REMARK 3 T33: 0.9546 T12: -0.2299 REMARK 3 T13: -0.2660 T23: 0.0128 REMARK 3 L TENSOR REMARK 3 L11: 0.7720 L22: 7.2370 REMARK 3 L33: 4.8408 L12: 2.7042 REMARK 3 L13: 0.7390 L23: 0.0995 REMARK 3 S TENSOR REMARK 3 S11: -1.0991 S12: 1.3664 S13: 0.8295 REMARK 3 S21: -0.6138 S22: 0.6009 S23: 0.6116 REMARK 3 S31: -0.6939 S32: 0.3590 S33: 0.2186 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 130 THROUGH 246 ) REMARK 3 ORIGIN FOR THE GROUP (A): -35.5846 14.2311 3.2161 REMARK 3 T TENSOR REMARK 3 T11: 0.6009 T22: 0.4251 REMARK 3 T33: 0.4631 T12: -0.0814 REMARK 3 T13: 0.0516 T23: 0.0953 REMARK 3 L TENSOR REMARK 3 L11: 8.0482 L22: 10.7082 REMARK 3 L33: 5.5867 L12: 3.9166 REMARK 3 L13: -0.7654 L23: -1.1668 REMARK 3 S TENSOR REMARK 3 S11: -0.0046 S12: 0.2940 S13: 0.5765 REMARK 3 S21: -0.0072 S22: -0.1090 S23: -0.0167 REMARK 3 S31: -0.3517 S32: 0.2263 S33: 0.0383 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 17 THROUGH 64 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.1845 18.0453 -1.8182 REMARK 3 T TENSOR REMARK 3 T11: 0.6270 T22: 1.0828 REMARK 3 T33: 1.5946 T12: -0.1705 REMARK 3 T13: 0.1086 T23: 0.1480 REMARK 3 L TENSOR REMARK 3 L11: 4.9333 L22: 4.6588 REMARK 3 L33: 1.3345 L12: -1.9155 REMARK 3 L13: -2.1395 L23: -0.1252 REMARK 3 S TENSOR REMARK 3 S11: -0.1898 S12: 0.3145 S13: -0.7377 REMARK 3 S21: -0.2508 S22: -0.1363 S23: -2.3940 REMARK 3 S31: -0.0856 S32: 1.0530 S33: 0.2876 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 65 THROUGH 104 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.5080 21.8545 10.5412 REMARK 3 T TENSOR REMARK 3 T11: 1.4020 T22: 1.7125 REMARK 3 T33: 1.1330 T12: 0.2488 REMARK 3 T13: -0.1921 T23: -0.1293 REMARK 3 L TENSOR REMARK 3 L11: 4.5854 L22: 4.8550 REMARK 3 L33: 10.0344 L12: -1.4484 REMARK 3 L13: -2.1059 L23: -3.6243 REMARK 3 S TENSOR REMARK 3 S11: -0.0396 S12: 0.5350 S13: 0.0040 REMARK 3 S21: -0.6242 S22: 0.2035 S23: 0.0322 REMARK 3 S31: 0.9254 S32: 0.0486 S33: -0.0571 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 105 THROUGH 129 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.1836 9.4728 4.6206 REMARK 3 T TENSOR REMARK 3 T11: 1.3618 T22: 1.2877 REMARK 3 T33: 1.1991 T12: 0.0563 REMARK 3 T13: -0.0831 T23: -0.1213 REMARK 3 L TENSOR REMARK 3 L11: 8.8556 L22: 4.6022 REMARK 3 L33: -0.3237 L12: 7.1712 REMARK 3 L13: 1.2717 L23: 1.3150 REMARK 3 S TENSOR REMARK 3 S11: -1.5116 S12: 1.7405 S13: -0.5566 REMARK 3 S21: -0.9224 S22: 1.6769 S23: -0.5235 REMARK 3 S31: -0.8356 S32: 0.3890 S33: -0.1236 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 130 THROUGH 228 ) REMARK 3 ORIGIN FOR THE GROUP (A): -39.1509 -10.4327 9.2544 REMARK 3 T TENSOR REMARK 3 T11: 1.0215 T22: 0.3704 REMARK 3 T33: 0.4562 T12: -0.0175 REMARK 3 T13: -0.0477 T23: -0.0140 REMARK 3 L TENSOR REMARK 3 L11: 7.9249 L22: 6.1523 REMARK 3 L33: 8.7367 L12: 3.7646 REMARK 3 L13: 5.1831 L23: 1.7037 REMARK 3 S TENSOR REMARK 3 S11: 0.6484 S12: -0.1666 S13: -1.0364 REMARK 3 S21: 0.6568 S22: -0.0824 S23: -0.2487 REMARK 3 S31: 1.8208 S32: -0.1014 S33: -0.4841 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 229 THROUGH 245 ) REMARK 3 ORIGIN FOR THE GROUP (A): -32.6277 -6.5517 18.3077 REMARK 3 T TENSOR REMARK 3 T11: 1.0829 T22: 0.5153 REMARK 3 T33: 0.4821 T12: 0.0553 REMARK 3 T13: -0.2093 T23: 0.0236 REMARK 3 L TENSOR REMARK 3 L11: 8.7872 L22: 6.5514 REMARK 3 L33: 3.1607 L12: -3.8872 REMARK 3 L13: -0.3411 L23: 0.0120 REMARK 3 S TENSOR REMARK 3 S11: 0.4896 S12: -0.1547 S13: -0.4799 REMARK 3 S21: 0.8819 S22: -0.2168 S23: -0.5740 REMARK 3 S31: 0.8790 S32: 0.2116 S33: -0.1527 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4XCM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 18-DEC-14. REMARK 100 THE DEPOSITION ID IS D_1000205440. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-SEP-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : MAX II REMARK 200 BEAMLINE : I911-3 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 34817 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 5.900 REMARK 200 R MERGE (I) : 0.06000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.65 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 5.90 REMARK 200 R MERGE FOR SHELL (I) : 0.75000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.75 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M SODIUM CITRATE PH 5.5, 16% PEG REMARK 280 4000, 15% 2-PROPANOL, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 65.93000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 131.86000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 98.89500 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 164.82500 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 32.96500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4320 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19090 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -29.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 15 REMARK 465 GLN A 16 REMARK 465 SER A 62 REMARK 465 ARG A 63 REMARK 465 GLU A 64 REMARK 465 ARG A 65 REMARK 465 THR A 66 REMARK 465 HIS A 67 REMARK 465 VAL A 68 REMARK 465 VAL A 69 REMARK 465 ALA A 70 REMARK 465 PRO A 71 REMARK 465 GLY A 72 REMARK 465 ASP A 73 REMARK 465 THR A 74 REMARK 465 LEU A 75 REMARK 465 PHE A 76 REMARK 465 SER A 77 REMARK 465 LEU A 78 REMARK 465 ALA A 79 REMARK 465 ARG A 80 REMARK 465 ARG A 81 REMARK 465 TYR A 82 REMARK 465 GLY A 83 REMARK 465 THR A 84 REMARK 465 THR A 85 REMARK 465 VAL A 86 REMARK 465 GLU A 87 REMARK 465 ALA A 88 REMARK 465 LEU A 89 REMARK 465 MSE A 90 REMARK 465 ARG A 91 REMARK 465 LEU A 92 REMARK 465 ASN A 93 REMARK 465 GLY A 94 REMARK 465 LEU A 95 REMARK 465 SER A 96 REMARK 465 SER A 97 REMARK 465 PRO A 98 REMARK 465 GLU A 99 REMARK 465 ILE A 100 REMARK 465 LYS A 101 REMARK 465 VAL A 102 REMARK 465 GLY A 103 REMARK 465 GLN A 104 REMARK 465 VAL A 105 REMARK 465 LEU A 106 REMARK 465 ARG A 107 REMARK 465 LEU A 108 REMARK 465 PRO A 109 REMARK 465 GLU A 110 REMARK 465 GLU A 111 REMARK 465 GLY A 112 REMARK 465 GLU A 113 REMARK 465 ALA A 114 REMARK 465 PRO A 115 REMARK 465 PRO A 116 REMARK 465 SER A 247 REMARK 465 PRO A 248 REMARK 465 GLU A 249 REMARK 465 PRO A 250 REMARK 465 PRO A 251 REMARK 465 PRO A 252 REMARK 465 ALA A 253 REMARK 465 PRO A 254 REMARK 465 SER A 255 REMARK 465 ALA A 256 REMARK 465 THR A 257 REMARK 465 PRO A 258 REMARK 465 ALA B 15 REMARK 465 GLN B 16 REMARK 465 GLU B 111 REMARK 465 GLY B 112 REMARK 465 GLU B 113 REMARK 465 ALA B 114 REMARK 465 PRO B 115 REMARK 465 PRO B 116 REMARK 465 PRO B 117 REMARK 465 PRO B 118 REMARK 465 PRO B 119 REMARK 465 PRO B 120 REMARK 465 GLU B 121 REMARK 465 ALA B 246 REMARK 465 SER B 247 REMARK 465 PRO B 248 REMARK 465 GLU B 249 REMARK 465 PRO B 250 REMARK 465 PRO B 251 REMARK 465 PRO B 252 REMARK 465 ALA B 253 REMARK 465 PRO B 254 REMARK 465 SER B 255 REMARK 465 ALA B 256 REMARK 465 THR B 257 REMARK 465 PRO B 258 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OH TYR A 163 O GLY A 190 2.04 REMARK 500 OH TYR B 19 OD2 ASP B 25 2.15 REMARK 500 OH TYR B 163 O GLY B 190 2.17 REMARK 500 NH1 ARG B 137 OE1 GLU B 165 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 36 -163.42 -128.93 REMARK 500 PRO A 127 -14.23 -48.70 REMARK 500 GLU B 123 -159.31 -127.56 REMARK 500 ALA B 124 -68.09 -158.22 REMARK 500 ASP B 203 22.31 -141.53 REMARK 500 SER B 222 11.65 59.97 REMARK 500 REMARK 500 REMARK: NULL DBREF 4XCM A 15 258 UNP Q5SLM7 Q5SLM7_THET8 15 258 DBREF 4XCM B 15 258 UNP Q5SLM7 Q5SLM7_THET8 15 258 SEQRES 1 A 244 ALA GLN ALA THR TYR THR VAL ALA PRO GLY ASP THR LEU SEQRES 2 A 244 TYR SER ILE ALA ARG ARG TYR GLY THR THR VAL GLU GLU SEQRES 3 A 244 LEU MSE ARG LEU ASN GLY LEU GLU SER PHE LEU LEU GLN SEQRES 4 A 244 PRO GLY GLN VAL LEU LYS LEU PRO SER ARG GLU ARG THR SEQRES 5 A 244 HIS VAL VAL ALA PRO GLY ASP THR LEU PHE SER LEU ALA SEQRES 6 A 244 ARG ARG TYR GLY THR THR VAL GLU ALA LEU MSE ARG LEU SEQRES 7 A 244 ASN GLY LEU SER SER PRO GLU ILE LYS VAL GLY GLN VAL SEQRES 8 A 244 LEU ARG LEU PRO GLU GLU GLY GLU ALA PRO PRO PRO PRO SEQRES 9 A 244 PRO PRO GLU PRO GLU ALA LEU ASP PRO GLU SER PRO LEU SEQRES 10 A 244 LEU ARG ALA VAL LEU ARG TYR LEU GLY VAL PRO TYR LYS SEQRES 11 A 244 TYR GLY ALA ASN SER PRO LEU ALA LEU ASP CYS SER ALA SEQRES 12 A 244 PHE VAL ALA GLN VAL TYR ALA GLU LEU GLY VAL ALA LEU SEQRES 13 A 244 PRO ARG THR THR LYS GLU GLN TYR GLN ALA PHE PRO PRO SEQRES 14 A 244 VAL GLU ALA PRO ARG PRO GLY ASP LEU VAL PHE PHE SER SEQRES 15 A 244 PHE GLY GLY LYS GLU VAL ASP HIS VAL GLY ILE TYR LEU SEQRES 16 A 244 GLY ARG GLY VAL PHE ALA HIS ALA SER SER TYR GLY SER SEQRES 17 A 244 ARG VAL VAL ILE GLU SER LEU GLU ALA PRO PHE TYR ARG SEQRES 18 A 244 LYS VAL TYR ARG GLY ALA ARG ARG VAL MSE ALA SER PRO SEQRES 19 A 244 GLU PRO PRO PRO ALA PRO SER ALA THR PRO SEQRES 1 B 244 ALA GLN ALA THR TYR THR VAL ALA PRO GLY ASP THR LEU SEQRES 2 B 244 TYR SER ILE ALA ARG ARG TYR GLY THR THR VAL GLU GLU SEQRES 3 B 244 LEU MSE ARG LEU ASN GLY LEU GLU SER PHE LEU LEU GLN SEQRES 4 B 244 PRO GLY GLN VAL LEU LYS LEU PRO SER ARG GLU ARG THR SEQRES 5 B 244 HIS VAL VAL ALA PRO GLY ASP THR LEU PHE SER LEU ALA SEQRES 6 B 244 ARG ARG TYR GLY THR THR VAL GLU ALA LEU MSE ARG LEU SEQRES 7 B 244 ASN GLY LEU SER SER PRO GLU ILE LYS VAL GLY GLN VAL SEQRES 8 B 244 LEU ARG LEU PRO GLU GLU GLY GLU ALA PRO PRO PRO PRO SEQRES 9 B 244 PRO PRO GLU PRO GLU ALA LEU ASP PRO GLU SER PRO LEU SEQRES 10 B 244 LEU ARG ALA VAL LEU ARG TYR LEU GLY VAL PRO TYR LYS SEQRES 11 B 244 TYR GLY ALA ASN SER PRO LEU ALA LEU ASP CYS SER ALA SEQRES 12 B 244 PHE VAL ALA GLN VAL TYR ALA GLU LEU GLY VAL ALA LEU SEQRES 13 B 244 PRO ARG THR THR LYS GLU GLN TYR GLN ALA PHE PRO PRO SEQRES 14 B 244 VAL GLU ALA PRO ARG PRO GLY ASP LEU VAL PHE PHE SER SEQRES 15 B 244 PHE GLY GLY LYS GLU VAL ASP HIS VAL GLY ILE TYR LEU SEQRES 16 B 244 GLY ARG GLY VAL PHE ALA HIS ALA SER SER TYR GLY SER SEQRES 17 B 244 ARG VAL VAL ILE GLU SER LEU GLU ALA PRO PHE TYR ARG SEQRES 18 B 244 LYS VAL TYR ARG GLY ALA ARG ARG VAL MSE ALA SER PRO SEQRES 19 B 244 GLU PRO PRO PRO ALA PRO SER ALA THR PRO MODRES 4XCM MSE A 42 MET MODIFIED RESIDUE MODRES 4XCM MSE A 245 MET MODIFIED RESIDUE MODRES 4XCM MSE B 42 MET MODIFIED RESIDUE MODRES 4XCM MSE B 90 MET MODIFIED RESIDUE MODRES 4XCM MSE B 245 MET MODIFIED RESIDUE HET MSE A 42 8 HET MSE A 245 8 HET MSE B 42 8 HET MSE B 90 8 HET MSE B 245 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 5(C5 H11 N O2 SE) FORMUL 3 HOH *16(H2 O) HELIX 1 AA1 THR A 26 TYR A 34 1 9 HELIX 2 AA2 THR A 37 GLY A 46 1 10 HELIX 3 AA3 SER A 129 LEU A 139 1 11 HELIX 4 AA4 PRO A 150 GLU A 165 1 16 HELIX 5 AA5 THR A 173 PHE A 181 1 9 HELIX 6 AA6 ALA A 231 VAL A 237 1 7 HELIX 7 AA7 THR B 26 TYR B 34 1 9 HELIX 8 AA8 THR B 37 GLY B 46 1 10 HELIX 9 AA9 THR B 74 GLY B 83 1 10 HELIX 10 AB1 GLU B 87 LEU B 92 1 6 HELIX 11 AB2 SER B 129 ARG B 137 1 9 HELIX 12 AB3 PRO B 150 GLU B 165 1 16 HELIX 13 AB4 THR B 173 GLN B 179 1 7 HELIX 14 AB5 ALA B 231 VAL B 237 1 7 SHEET 1 AA1 2 THR A 18 THR A 20 0 SHEET 2 AA1 2 VAL A 57 LYS A 59 -1 O LEU A 58 N TYR A 19 SHEET 1 AA2 5 VAL A 224 SER A 228 0 SHEET 2 AA2 5 VAL A 213 ALA A 217 -1 N PHE A 214 O GLU A 227 SHEET 3 AA2 5 HIS A 204 GLY A 210 -1 N LEU A 209 O VAL A 213 SHEET 4 AA2 5 LEU A 192 PHE A 195 -1 N PHE A 195 O HIS A 204 SHEET 5 AA2 5 TYR A 238 ARG A 242 -1 O ARG A 242 N LEU A 192 SHEET 1 AA3 2 THR B 18 THR B 20 0 SHEET 2 AA3 2 VAL B 57 LYS B 59 -1 O LEU B 58 N TYR B 19 SHEET 1 AA4 2 ARG B 65 VAL B 68 0 SHEET 2 AA4 2 VAL B 105 LEU B 108 -1 O LEU B 106 N HIS B 67 SHEET 1 AA5 6 PRO B 183 VAL B 184 0 SHEET 2 AA5 6 TYR B 238 ARG B 242 -1 O ALA B 241 N VAL B 184 SHEET 3 AA5 6 LEU B 192 PHE B 195 -1 N PHE B 194 O GLY B 240 SHEET 4 AA5 6 HIS B 204 GLY B 210 -1 O GLY B 206 N VAL B 193 SHEET 5 AA5 6 VAL B 213 ALA B 217 -1 O ALA B 215 N ILE B 207 SHEET 6 AA5 6 VAL B 224 SER B 228 -1 O GLU B 227 N PHE B 214 LINK C LEU A 41 N MSE A 42 1555 1555 1.33 LINK C MSE A 42 N ARG A 43 1555 1555 1.33 LINK C VAL A 244 N MSE A 245 1555 1555 1.33 LINK C MSE A 245 N ALA A 246 1555 1555 1.33 LINK C LEU B 41 N MSE B 42 1555 1555 1.33 LINK C MSE B 42 N ARG B 43 1555 1555 1.33 LINK C LEU B 89 N MSE B 90 1555 1555 1.33 LINK C MSE B 90 N ARG B 91 1555 1555 1.33 LINK C VAL B 244 N MSE B 245 1555 1555 1.33 CRYST1 71.600 71.600 197.790 90.00 90.00 120.00 P 61 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013966 0.008064 0.000000 0.00000 SCALE2 0.000000 0.016127 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005056 0.00000