data_4XCP # _entry.id 4XCP # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.284 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4XCP WWPDB D_1000205428 # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 4XCP _pdbx_database_status.recvd_initial_deposition_date 2014-12-18 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Gabrielsen, M.' 1 'Rey-Burusco, M.F.' 2 'Ibanez-Shimabukuro, M.' 3 'Griffiths, K.' 4 'Kennedy, M.W.' 5 'Corsico, B.' 6 'Smith, B.O.' 7 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Biochem.J. _citation.journal_id_ASTM BIJOAK _citation.journal_id_CSD 0043 _citation.journal_id_ISSN 1470-8728 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 471 _citation.language ? _citation.page_first 403 _citation.page_last 414 _citation.title ;Diversity in the structures and ligand-binding sites of nematode fatty acid and retinol-binding proteins revealed by Na-FAR-1 from Necator americanus. ; _citation.year 2015 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1042/BJ20150068 _citation.pdbx_database_id_PubMed 26318523 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Rey-Burusco, M.F.' 1 primary 'Ibanez-Shimabukuro, M.' 2 primary 'Gabrielsen, M.' 3 primary 'Franchini, G.R.' 4 primary 'Roe, A.J.' 5 primary 'Griffiths, K.' 6 primary 'Zhan, B.' 7 primary 'Cooper, A.' 8 primary 'Kennedy, M.W.' 9 primary 'Corsico, B.' 10 primary 'Smith, B.O.' 11 # _cell.entry_id 4XCP _cell.length_a 121.123 _cell.length_b 121.123 _cell.length_c 121.123 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4XCP _symmetry.space_group_name_H-M 'P 4 3 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 207 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Nematode fatty acid retinoid binding protein' 19038.008 1 ? 'M1MSE, M15MSE, M70MSE, M115MSE' 'UNP residues 21-175' ? 2 non-polymer syn 'PALMITIC ACID' 256.424 2 ? ? ? ? 3 water nat water 18.015 136 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(MSE)GSSHHHHHHSSGH(MSE)FKYEDIPADYRDL(MSE)PPEARDFLQNLSDGDKTVLKEVFKAGPYKNTEESIAALK KKSPELGAKVEKLHA(MSE)VKSKIAALGPEAKGFAEKSIEIARGIKARYYTGNEPTKDDLKASVKEVLKLYKA(MSE)S DAGKADFGKQFPFLAKVFESGKAAKFAGEN ; _entity_poly.pdbx_seq_one_letter_code_can ;MGSSHHHHHHSSGHMFKYEDIPADYRDLMPPEARDFLQNLSDGDKTVLKEVFKAGPYKNTEESIAALKKKSPELGAKVEK LHAMVKSKIAALGPEAKGFAEKSIEIARGIKARYYTGNEPTKDDLKASVKEVLKLYKAMSDAGKADFGKQFPFLAKVFES GKAAKFAGEN ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 GLY n 1 3 SER n 1 4 SER n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 HIS n 1 11 SER n 1 12 SER n 1 13 GLY n 1 14 HIS n 1 15 MSE n 1 16 PHE n 1 17 LYS n 1 18 TYR n 1 19 GLU n 1 20 ASP n 1 21 ILE n 1 22 PRO n 1 23 ALA n 1 24 ASP n 1 25 TYR n 1 26 ARG n 1 27 ASP n 1 28 LEU n 1 29 MSE n 1 30 PRO n 1 31 PRO n 1 32 GLU n 1 33 ALA n 1 34 ARG n 1 35 ASP n 1 36 PHE n 1 37 LEU n 1 38 GLN n 1 39 ASN n 1 40 LEU n 1 41 SER n 1 42 ASP n 1 43 GLY n 1 44 ASP n 1 45 LYS n 1 46 THR n 1 47 VAL n 1 48 LEU n 1 49 LYS n 1 50 GLU n 1 51 VAL n 1 52 PHE n 1 53 LYS n 1 54 ALA n 1 55 GLY n 1 56 PRO n 1 57 TYR n 1 58 LYS n 1 59 ASN n 1 60 THR n 1 61 GLU n 1 62 GLU n 1 63 SER n 1 64 ILE n 1 65 ALA n 1 66 ALA n 1 67 LEU n 1 68 LYS n 1 69 LYS n 1 70 LYS n 1 71 SER n 1 72 PRO n 1 73 GLU n 1 74 LEU n 1 75 GLY n 1 76 ALA n 1 77 LYS n 1 78 VAL n 1 79 GLU n 1 80 LYS n 1 81 LEU n 1 82 HIS n 1 83 ALA n 1 84 MSE n 1 85 VAL n 1 86 LYS n 1 87 SER n 1 88 LYS n 1 89 ILE n 1 90 ALA n 1 91 ALA n 1 92 LEU n 1 93 GLY n 1 94 PRO n 1 95 GLU n 1 96 ALA n 1 97 LYS n 1 98 GLY n 1 99 PHE n 1 100 ALA n 1 101 GLU n 1 102 LYS n 1 103 SER n 1 104 ILE n 1 105 GLU n 1 106 ILE n 1 107 ALA n 1 108 ARG n 1 109 GLY n 1 110 ILE n 1 111 LYS n 1 112 ALA n 1 113 ARG n 1 114 TYR n 1 115 TYR n 1 116 THR n 1 117 GLY n 1 118 ASN n 1 119 GLU n 1 120 PRO n 1 121 THR n 1 122 LYS n 1 123 ASP n 1 124 ASP n 1 125 LEU n 1 126 LYS n 1 127 ALA n 1 128 SER n 1 129 VAL n 1 130 LYS n 1 131 GLU n 1 132 VAL n 1 133 LEU n 1 134 LYS n 1 135 LEU n 1 136 TYR n 1 137 LYS n 1 138 ALA n 1 139 MSE n 1 140 SER n 1 141 ASP n 1 142 ALA n 1 143 GLY n 1 144 LYS n 1 145 ALA n 1 146 ASP n 1 147 PHE n 1 148 GLY n 1 149 LYS n 1 150 GLN n 1 151 PHE n 1 152 PRO n 1 153 PHE n 1 154 LEU n 1 155 ALA n 1 156 LYS n 1 157 VAL n 1 158 PHE n 1 159 GLU n 1 160 SER n 1 161 GLY n 1 162 LYS n 1 163 ALA n 1 164 ALA n 1 165 LYS n 1 166 PHE n 1 167 ALA n 1 168 GLY n 1 169 GLU n 1 170 ASN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 170 _entity_src_gen.gene_src_common_name 'Human hookworm' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene NECAME_14208 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Necator americanus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 51031 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain B834 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET11a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code W2SRJ3_NECAM _struct_ref.pdbx_db_accession W2SRJ3 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;FKYEDIPADYRDLMPPEARDFLQNLSDGDKTVLKEVFKAGPYKNTEESIAALKKKSPELGAKVEKLHAMVKSKIAALGPE AKGFAEKSIEIARGIKARYYTGNEPTKDDLKASVKEVLKLYKAMSDAGKADFGKQFPFLAKVFESGKAAKFAGEN ; _struct_ref.pdbx_align_begin 21 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4XCP _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 16 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 170 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession W2SRJ3 _struct_ref_seq.db_align_beg 21 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 175 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 155 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4XCP MSE A 1 ? UNP W2SRJ3 ? ? 'initiating methionine' -14 1 1 4XCP GLY A 2 ? UNP W2SRJ3 ? ? 'expression tag' -13 2 1 4XCP SER A 3 ? UNP W2SRJ3 ? ? 'expression tag' -12 3 1 4XCP SER A 4 ? UNP W2SRJ3 ? ? 'expression tag' -11 4 1 4XCP HIS A 5 ? UNP W2SRJ3 ? ? 'expression tag' -10 5 1 4XCP HIS A 6 ? UNP W2SRJ3 ? ? 'expression tag' -9 6 1 4XCP HIS A 7 ? UNP W2SRJ3 ? ? 'expression tag' -8 7 1 4XCP HIS A 8 ? UNP W2SRJ3 ? ? 'expression tag' -7 8 1 4XCP HIS A 9 ? UNP W2SRJ3 ? ? 'expression tag' -6 9 1 4XCP HIS A 10 ? UNP W2SRJ3 ? ? 'expression tag' -5 10 1 4XCP SER A 11 ? UNP W2SRJ3 ? ? 'expression tag' -4 11 1 4XCP SER A 12 ? UNP W2SRJ3 ? ? 'expression tag' -3 12 1 4XCP GLY A 13 ? UNP W2SRJ3 ? ? 'expression tag' -2 13 1 4XCP HIS A 14 ? UNP W2SRJ3 ? ? 'expression tag' -1 14 1 4XCP MSE A 15 ? UNP W2SRJ3 ? ? 'expression tag' 0 15 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PLM non-polymer . 'PALMITIC ACID' ? 'C16 H32 O2' 256.424 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 4XCP _exptl.crystals_number ? _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 4.48 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 72.53 _exptl_crystal.description Cubic _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 4.2 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '38 % PEG 300, 100 mM phosphate citrate pH 4.2' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M-F' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2011-12-14 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9793 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'DIAMOND BEAMLINE I04' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9793 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline I04 _diffrn_source.pdbx_synchrotron_site Diamond # _reflns.B_iso_Wilson_estimate 30.11 _reflns.entry_id 4XCP _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.14 _reflns.d_resolution_low 29.38 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all 17353 _reflns.number_obs 17353 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.91 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 28.9 _reflns.pdbx_Rmerge_I_obs 0.142 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 25.5 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.14 _reflns_shell.d_res_low 2.27 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 4.2 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all 97 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.785 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 14.5 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4XCP _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 17346 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 29.38 _refine.ls_d_res_high 2.14 _refine.ls_percent_reflns_obs 99.91 _refine.ls_R_factor_obs 0.2039 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2030 _refine.ls_R_factor_R_free 0.2223 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.06 _refine.ls_number_reflns_R_free 877 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.9252 _refine.correlation_coeff_Fo_to_Fc_free 0.9201 _refine.B_iso_mean 32.54 _refine.aniso_B[1][1] 0.0000 _refine.aniso_B[2][2] 0.0000 _refine.aniso_B[3][3] 0.0000 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI 0.149 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI 0.134 _refine.pdbx_overall_SU_R_Blow_DPI 0.160 _refine.pdbx_overall_SU_R_free_Blow_DPI 0.140 # _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_analyze.entry_id 4XCP _refine_analyze.Luzzati_coordinate_error_obs 0.273 _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1213 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 36 _refine_hist.number_atoms_solvent 136 _refine_hist.number_atoms_total 1385 _refine_hist.d_res_high 2.14 _refine_hist.d_res_low 29.38 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function t_bond_d 0.010 ? 2.00 1302 'X-RAY DIFFRACTION' HARMONIC t_angle_deg 0.93 ? 2.00 1765 'X-RAY DIFFRACTION' HARMONIC t_dihedral_angle_d ? ? 2.00 481 'X-RAY DIFFRACTION' SINUSOIDAL t_incorr_chiral_ct ? ? ? ? 'X-RAY DIFFRACTION' ? t_pseud_angle ? ? ? ? 'X-RAY DIFFRACTION' ? t_trig_c_planes ? ? 2.00 30 'X-RAY DIFFRACTION' HARMONIC t_gen_planes ? ? 5.00 178 'X-RAY DIFFRACTION' HARMONIC t_it ? ? 20.00 1302 'X-RAY DIFFRACTION' HARMONIC t_nbd ? ? ? ? 'X-RAY DIFFRACTION' ? t_omega_torsion 2.59 ? ? ? 'X-RAY DIFFRACTION' ? t_other_torsion 18.01 ? ? ? 'X-RAY DIFFRACTION' ? t_improper_torsion ? ? ? ? 'X-RAY DIFFRACTION' ? t_chiral_improper_torsion ? ? 5.00 155 'X-RAY DIFFRACTION' SEMIHARMONIC t_sum_occupancies ? ? ? ? 'X-RAY DIFFRACTION' ? t_utility_distance ? ? ? ? 'X-RAY DIFFRACTION' ? t_utility_angle ? ? ? ? 'X-RAY DIFFRACTION' ? t_utility_torsion ? ? ? ? 'X-RAY DIFFRACTION' ? t_ideal_dist_contact ? ? 4.00 1631 'X-RAY DIFFRACTION' SEMIHARMONIC # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 9 _refine_ls_shell.d_res_high 2.14 _refine_ls_shell.d_res_low 2.27 _refine_ls_shell.number_reflns_R_work 2553 _refine_ls_shell.R_factor_R_work 0.1861 _refine_ls_shell.percent_reflns_obs 99.91 _refine_ls_shell.R_factor_R_free 0.2502 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free 5.72 _refine_ls_shell.number_reflns_R_free 155 _refine_ls_shell.number_reflns_all 2708 _refine_ls_shell.R_factor_all 0.1898 # _struct.entry_id 4XCP _struct.title 'Fatty Acid and Retinol binding protein Na-FAR-1 from Necator americanus' _struct.pdbx_descriptor 'Fatty acid and retinol binding protein' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 4XCP _struct_keywords.text 'Fatty acid retinol binding, retinol-binding protein' _struct_keywords.pdbx_keywords 'retinol-binding protein' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 LYS A 17 ? ILE A 21 ? LYS A 2 ILE A 6 5 ? 5 HELX_P HELX_P2 AA2 PRO A 22 ? ASP A 27 ? PRO A 7 ASP A 12 1 ? 6 HELX_P HELX_P3 AA3 PRO A 30 ? LEU A 40 ? PRO A 15 LEU A 25 1 ? 11 HELX_P HELX_P4 AA4 SER A 41 ? ALA A 54 ? SER A 26 ALA A 39 1 ? 14 HELX_P HELX_P5 AA5 ASN A 59 ? SER A 71 ? ASN A 44 SER A 56 1 ? 13 HELX_P HELX_P6 AA6 SER A 71 ? ALA A 91 ? SER A 56 ALA A 76 1 ? 21 HELX_P HELX_P7 AA7 GLY A 93 ? THR A 116 ? GLY A 78 THR A 101 1 ? 24 HELX_P HELX_P8 AA8 THR A 121 ? MSE A 139 ? THR A 106 MSE A 124 1 ? 19 HELX_P HELX_P9 AA9 SER A 140 ? PHE A 151 ? SER A 125 PHE A 136 1 ? 12 HELX_P HELX_P10 AB1 PHE A 151 ? SER A 160 ? PHE A 136 SER A 145 1 ? 10 HELX_P HELX_P11 AB2 GLY A 161 ? GLY A 168 ? GLY A 146 GLY A 153 1 ? 8 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale both ? A MSE 15 C ? ? ? 1_555 A PHE 16 N ? ? A MSE 0 A PHE 1 1_555 ? ? ? ? ? ? ? 1.330 ? covale2 covale both ? A LEU 28 C ? ? ? 1_555 A MSE 29 N ? ? A LEU 13 A MSE 14 1_555 ? ? ? ? ? ? ? 1.344 ? covale3 covale both ? A MSE 29 C ? ? ? 1_555 A PRO 30 N ? ? A MSE 14 A PRO 15 1_555 ? ? ? ? ? ? ? 1.357 ? covale4 covale both ? A ALA 83 C ? ? ? 1_555 A MSE 84 N ? ? A ALA 68 A MSE 69 1_555 ? ? ? ? ? ? ? 1.343 ? covale5 covale both ? A MSE 84 C ? ? ? 1_555 A VAL 85 N ? ? A MSE 69 A VAL 70 1_555 ? ? ? ? ? ? ? 1.345 ? covale6 covale both ? A ALA 138 C ? ? ? 1_555 A MSE 139 N ? ? A ALA 123 A MSE 124 1_555 ? ? ? ? ? ? ? 1.354 ? covale7 covale both ? A MSE 139 C ? ? ? 1_555 A SER 140 N ? ? A MSE 124 A SER 125 1_555 ? ? ? ? ? ? ? 1.348 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLY _struct_mon_prot_cis.label_seq_id 55 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLY _struct_mon_prot_cis.auth_seq_id 40 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 56 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 41 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 1.18 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A PLM 201 ? 9 'binding site for residue PLM A 201' AC2 Software A PLM 202 ? 7 'binding site for residue PLM A 202' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 9 PHE A 16 ? PHE A 1 . ? 1_555 ? 2 AC1 9 TYR A 25 ? TYR A 10 . ? 1_555 ? 3 AC1 9 ALA A 33 ? ALA A 18 . ? 1_555 ? 4 AC1 9 PHE A 36 ? PHE A 21 . ? 1_555 ? 5 AC1 9 LEU A 37 ? LEU A 22 . ? 1_555 ? 6 AC1 9 LEU A 48 ? LEU A 33 . ? 1_555 ? 7 AC1 9 LYS A 111 ? LYS A 96 . ? 1_555 ? 8 AC1 9 TYR A 114 ? TYR A 99 . ? 1_555 ? 9 AC1 9 TYR A 115 ? TYR A 100 . ? 1_555 ? 10 AC2 7 ASN A 59 ? ASN A 44 . ? 1_555 ? 11 AC2 7 THR A 60 ? THR A 45 . ? 1_555 ? 12 AC2 7 GLU A 61 ? GLU A 46 . ? 1_555 ? 13 AC2 7 SER A 63 ? SER A 48 . ? 1_555 ? 14 AC2 7 VAL A 78 ? VAL A 63 . ? 1_555 ? 15 AC2 7 HIS A 82 ? HIS A 67 . ? 1_555 ? 16 AC2 7 ARG A 108 ? ARG A 93 . ? 1_555 ? # _atom_sites.entry_id 4XCP _atom_sites.fract_transf_matrix[1][1] 0.008256 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.008256 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008256 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 -14 ? ? ? A . n A 1 2 GLY 2 -13 ? ? ? A . n A 1 3 SER 3 -12 ? ? ? A . n A 1 4 SER 4 -11 ? ? ? A . n A 1 5 HIS 5 -10 ? ? ? A . n A 1 6 HIS 6 -9 ? ? ? A . n A 1 7 HIS 7 -8 ? ? ? A . n A 1 8 HIS 8 -7 ? ? ? A . n A 1 9 HIS 9 -6 ? ? ? A . n A 1 10 HIS 10 -5 ? ? ? A . n A 1 11 SER 11 -4 ? ? ? A . n A 1 12 SER 12 -3 ? ? ? A . n A 1 13 GLY 13 -2 ? ? ? A . n A 1 14 HIS 14 -1 ? ? ? A . n A 1 15 MSE 15 0 0 MSE MSE A . n A 1 16 PHE 16 1 1 PHE PHE A . n A 1 17 LYS 17 2 2 LYS LYS A . n A 1 18 TYR 18 3 3 TYR TYR A . n A 1 19 GLU 19 4 4 GLU GLU A . n A 1 20 ASP 20 5 5 ASP ASP A . n A 1 21 ILE 21 6 6 ILE ILE A . n A 1 22 PRO 22 7 7 PRO PRO A . n A 1 23 ALA 23 8 8 ALA ALA A . n A 1 24 ASP 24 9 9 ASP ASP A . n A 1 25 TYR 25 10 10 TYR TYR A . n A 1 26 ARG 26 11 11 ARG ARG A . n A 1 27 ASP 27 12 12 ASP ASP A . n A 1 28 LEU 28 13 13 LEU LEU A . n A 1 29 MSE 29 14 14 MSE MSE A . n A 1 30 PRO 30 15 15 PRO PRO A . n A 1 31 PRO 31 16 16 PRO PRO A . n A 1 32 GLU 32 17 17 GLU GLU A . n A 1 33 ALA 33 18 18 ALA ALA A . n A 1 34 ARG 34 19 19 ARG ARG A . n A 1 35 ASP 35 20 20 ASP ASP A . n A 1 36 PHE 36 21 21 PHE PHE A . n A 1 37 LEU 37 22 22 LEU LEU A . n A 1 38 GLN 38 23 23 GLN GLN A . n A 1 39 ASN 39 24 24 ASN ASN A . n A 1 40 LEU 40 25 25 LEU LEU A . n A 1 41 SER 41 26 26 SER SER A . n A 1 42 ASP 42 27 27 ASP ASP A . n A 1 43 GLY 43 28 28 GLY GLY A . n A 1 44 ASP 44 29 29 ASP ASP A . n A 1 45 LYS 45 30 30 LYS LYS A . n A 1 46 THR 46 31 31 THR THR A . n A 1 47 VAL 47 32 32 VAL VAL A . n A 1 48 LEU 48 33 33 LEU LEU A . n A 1 49 LYS 49 34 34 LYS LYS A . n A 1 50 GLU 50 35 35 GLU GLU A . n A 1 51 VAL 51 36 36 VAL VAL A . n A 1 52 PHE 52 37 37 PHE PHE A . n A 1 53 LYS 53 38 38 LYS LYS A . n A 1 54 ALA 54 39 39 ALA ALA A . n A 1 55 GLY 55 40 40 GLY GLY A . n A 1 56 PRO 56 41 41 PRO PRO A . n A 1 57 TYR 57 42 42 TYR TYR A . n A 1 58 LYS 58 43 43 LYS LYS A . n A 1 59 ASN 59 44 44 ASN ASN A . n A 1 60 THR 60 45 45 THR THR A . n A 1 61 GLU 61 46 46 GLU GLU A . n A 1 62 GLU 62 47 47 GLU GLU A . n A 1 63 SER 63 48 48 SER SER A . n A 1 64 ILE 64 49 49 ILE ILE A . n A 1 65 ALA 65 50 50 ALA ALA A . n A 1 66 ALA 66 51 51 ALA ALA A . n A 1 67 LEU 67 52 52 LEU LEU A . n A 1 68 LYS 68 53 53 LYS LYS A . n A 1 69 LYS 69 54 54 LYS LYS A . n A 1 70 LYS 70 55 55 LYS LYS A . n A 1 71 SER 71 56 56 SER SER A . n A 1 72 PRO 72 57 57 PRO PRO A . n A 1 73 GLU 73 58 58 GLU GLU A . n A 1 74 LEU 74 59 59 LEU LEU A . n A 1 75 GLY 75 60 60 GLY GLY A . n A 1 76 ALA 76 61 61 ALA ALA A . n A 1 77 LYS 77 62 62 LYS LYS A . n A 1 78 VAL 78 63 63 VAL VAL A . n A 1 79 GLU 79 64 64 GLU GLU A . n A 1 80 LYS 80 65 65 LYS LYS A . n A 1 81 LEU 81 66 66 LEU LEU A . n A 1 82 HIS 82 67 67 HIS HIS A . n A 1 83 ALA 83 68 68 ALA ALA A . n A 1 84 MSE 84 69 69 MSE MSE A . n A 1 85 VAL 85 70 70 VAL VAL A . n A 1 86 LYS 86 71 71 LYS LYS A . n A 1 87 SER 87 72 72 SER SER A . n A 1 88 LYS 88 73 73 LYS LYS A . n A 1 89 ILE 89 74 74 ILE ILE A . n A 1 90 ALA 90 75 75 ALA ALA A . n A 1 91 ALA 91 76 76 ALA ALA A . n A 1 92 LEU 92 77 77 LEU LEU A . n A 1 93 GLY 93 78 78 GLY GLY A . n A 1 94 PRO 94 79 79 PRO PRO A . n A 1 95 GLU 95 80 80 GLU GLU A . n A 1 96 ALA 96 81 81 ALA ALA A . n A 1 97 LYS 97 82 82 LYS LYS A . n A 1 98 GLY 98 83 83 GLY GLY A . n A 1 99 PHE 99 84 84 PHE PHE A . n A 1 100 ALA 100 85 85 ALA ALA A . n A 1 101 GLU 101 86 86 GLU GLU A . n A 1 102 LYS 102 87 87 LYS LYS A . n A 1 103 SER 103 88 88 SER SER A . n A 1 104 ILE 104 89 89 ILE ILE A . n A 1 105 GLU 105 90 90 GLU GLU A . n A 1 106 ILE 106 91 91 ILE ILE A . n A 1 107 ALA 107 92 92 ALA ALA A . n A 1 108 ARG 108 93 93 ARG ARG A . n A 1 109 GLY 109 94 94 GLY GLY A . n A 1 110 ILE 110 95 95 ILE ILE A . n A 1 111 LYS 111 96 96 LYS LYS A . n A 1 112 ALA 112 97 97 ALA ALA A . n A 1 113 ARG 113 98 98 ARG ARG A . n A 1 114 TYR 114 99 99 TYR TYR A . n A 1 115 TYR 115 100 100 TYR TYR A . n A 1 116 THR 116 101 101 THR THR A . n A 1 117 GLY 117 102 102 GLY GLY A . n A 1 118 ASN 118 103 103 ASN ASN A . n A 1 119 GLU 119 104 104 GLU GLU A . n A 1 120 PRO 120 105 105 PRO PRO A . n A 1 121 THR 121 106 106 THR THR A . n A 1 122 LYS 122 107 107 LYS LYS A . n A 1 123 ASP 123 108 108 ASP ASP A . n A 1 124 ASP 124 109 109 ASP ASP A . n A 1 125 LEU 125 110 110 LEU LEU A . n A 1 126 LYS 126 111 111 LYS LYS A . n A 1 127 ALA 127 112 112 ALA ALA A . n A 1 128 SER 128 113 113 SER SER A . n A 1 129 VAL 129 114 114 VAL VAL A . n A 1 130 LYS 130 115 115 LYS LYS A . n A 1 131 GLU 131 116 116 GLU GLU A . n A 1 132 VAL 132 117 117 VAL VAL A . n A 1 133 LEU 133 118 118 LEU LEU A . n A 1 134 LYS 134 119 119 LYS LYS A . n A 1 135 LEU 135 120 120 LEU LEU A . n A 1 136 TYR 136 121 121 TYR TYR A . n A 1 137 LYS 137 122 122 LYS LYS A . n A 1 138 ALA 138 123 123 ALA ALA A . n A 1 139 MSE 139 124 124 MSE MSE A . n A 1 140 SER 140 125 125 SER SER A . n A 1 141 ASP 141 126 126 ASP ASP A . n A 1 142 ALA 142 127 127 ALA ALA A . n A 1 143 GLY 143 128 128 GLY GLY A . n A 1 144 LYS 144 129 129 LYS LYS A . n A 1 145 ALA 145 130 130 ALA ALA A . n A 1 146 ASP 146 131 131 ASP ASP A . n A 1 147 PHE 147 132 132 PHE PHE A . n A 1 148 GLY 148 133 133 GLY GLY A . n A 1 149 LYS 149 134 134 LYS LYS A . n A 1 150 GLN 150 135 135 GLN GLN A . n A 1 151 PHE 151 136 136 PHE PHE A . n A 1 152 PRO 152 137 137 PRO PRO A . n A 1 153 PHE 153 138 138 PHE PHE A . n A 1 154 LEU 154 139 139 LEU LEU A . n A 1 155 ALA 155 140 140 ALA ALA A . n A 1 156 LYS 156 141 141 LYS LYS A . n A 1 157 VAL 157 142 142 VAL VAL A . n A 1 158 PHE 158 143 143 PHE PHE A . n A 1 159 GLU 159 144 144 GLU GLU A . n A 1 160 SER 160 145 145 SER SER A . n A 1 161 GLY 161 146 146 GLY GLY A . n A 1 162 LYS 162 147 147 LYS LYS A . n A 1 163 ALA 163 148 148 ALA ALA A . n A 1 164 ALA 164 149 149 ALA ALA A . n A 1 165 LYS 165 150 150 LYS LYS A . n A 1 166 PHE 166 151 151 PHE PHE A . n A 1 167 ALA 167 152 152 ALA ALA A . n A 1 168 GLY 168 153 153 GLY GLY A . n A 1 169 GLU 169 154 154 GLU GLU A . n A 1 170 ASN 170 155 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PLM 1 201 1 PLM PLM A . C 2 PLM 1 202 2 PLM PLM A . D 3 HOH 1 301 155 HOH HOH A . D 3 HOH 2 302 115 HOH HOH A . D 3 HOH 3 303 145 HOH HOH A . D 3 HOH 4 304 13 HOH HOH A . D 3 HOH 5 305 15 HOH HOH A . D 3 HOH 6 306 77 HOH HOH A . D 3 HOH 7 307 34 HOH HOH A . D 3 HOH 8 308 14 HOH HOH A . D 3 HOH 9 309 6 HOH HOH A . D 3 HOH 10 310 135 HOH HOH A . D 3 HOH 11 311 121 HOH HOH A . D 3 HOH 12 312 89 HOH HOH A . D 3 HOH 13 313 30 HOH HOH A . D 3 HOH 14 314 27 HOH HOH A . D 3 HOH 15 315 78 HOH HOH A . D 3 HOH 16 316 7 HOH HOH A . D 3 HOH 17 317 28 HOH HOH A . D 3 HOH 18 318 76 HOH HOH A . D 3 HOH 19 319 2 HOH HOH A . D 3 HOH 20 320 19 HOH HOH A . D 3 HOH 21 321 86 HOH HOH A . D 3 HOH 22 322 4 HOH HOH A . D 3 HOH 23 323 33 HOH HOH A . D 3 HOH 24 324 57 HOH HOH A . D 3 HOH 25 325 16 HOH HOH A . D 3 HOH 26 326 60 HOH HOH A . D 3 HOH 27 327 68 HOH HOH A . D 3 HOH 28 328 163 HOH HOH A . D 3 HOH 29 329 23 HOH HOH A . D 3 HOH 30 330 8 HOH HOH A . D 3 HOH 31 331 156 HOH HOH A . D 3 HOH 32 332 124 HOH HOH A . D 3 HOH 33 333 47 HOH HOH A . D 3 HOH 34 334 114 HOH HOH A . D 3 HOH 35 335 3 HOH HOH A . D 3 HOH 36 336 105 HOH HOH A . D 3 HOH 37 337 44 HOH HOH A . D 3 HOH 38 338 39 HOH HOH A . D 3 HOH 39 339 54 HOH HOH A . D 3 HOH 40 340 22 HOH HOH A . D 3 HOH 41 341 127 HOH HOH A . D 3 HOH 42 342 110 HOH HOH A . D 3 HOH 43 343 84 HOH HOH A . D 3 HOH 44 344 104 HOH HOH A . D 3 HOH 45 345 159 HOH HOH A . D 3 HOH 46 346 109 HOH HOH A . D 3 HOH 47 347 132 HOH HOH A . D 3 HOH 48 348 87 HOH HOH A . D 3 HOH 49 349 157 HOH HOH A . D 3 HOH 50 350 17 HOH HOH A . D 3 HOH 51 351 11 HOH HOH A . D 3 HOH 52 352 29 HOH HOH A . D 3 HOH 53 353 51 HOH HOH A . D 3 HOH 54 354 18 HOH HOH A . D 3 HOH 55 355 119 HOH HOH A . D 3 HOH 56 356 26 HOH HOH A . D 3 HOH 57 357 31 HOH HOH A . D 3 HOH 58 358 82 HOH HOH A . D 3 HOH 59 359 25 HOH HOH A . D 3 HOH 60 360 20 HOH HOH A . D 3 HOH 61 361 140 HOH HOH A . D 3 HOH 62 362 37 HOH HOH A . D 3 HOH 63 363 103 HOH HOH A . D 3 HOH 64 364 12 HOH HOH A . D 3 HOH 65 365 146 HOH HOH A . D 3 HOH 66 366 98 HOH HOH A . D 3 HOH 67 367 126 HOH HOH A . D 3 HOH 68 368 10 HOH HOH A . D 3 HOH 69 369 116 HOH HOH A . D 3 HOH 70 370 101 HOH HOH A . D 3 HOH 71 371 36 HOH HOH A . D 3 HOH 72 372 88 HOH HOH A . D 3 HOH 73 373 107 HOH HOH A . D 3 HOH 74 374 134 HOH HOH A . D 3 HOH 75 375 45 HOH HOH A . D 3 HOH 76 376 42 HOH HOH A . D 3 HOH 77 377 70 HOH HOH A . D 3 HOH 78 378 58 HOH HOH A . D 3 HOH 79 379 21 HOH HOH A . D 3 HOH 80 380 83 HOH HOH A . D 3 HOH 81 381 85 HOH HOH A . D 3 HOH 82 382 65 HOH HOH A . D 3 HOH 83 383 125 HOH HOH A . D 3 HOH 84 384 52 HOH HOH A . D 3 HOH 85 385 56 HOH HOH A . D 3 HOH 86 386 133 HOH HOH A . D 3 HOH 87 387 81 HOH HOH A . D 3 HOH 88 388 59 HOH HOH A . D 3 HOH 89 389 99 HOH HOH A . D 3 HOH 90 390 38 HOH HOH A . D 3 HOH 91 391 164 HOH HOH A . D 3 HOH 92 392 5 HOH HOH A . D 3 HOH 93 393 108 HOH HOH A . D 3 HOH 94 394 139 HOH HOH A . D 3 HOH 95 395 153 HOH HOH A . D 3 HOH 96 396 55 HOH HOH A . D 3 HOH 97 397 91 HOH HOH A . D 3 HOH 98 398 151 HOH HOH A . D 3 HOH 99 399 148 HOH HOH A . D 3 HOH 100 400 111 HOH HOH A . D 3 HOH 101 401 136 HOH HOH A . D 3 HOH 102 402 95 HOH HOH A . D 3 HOH 103 403 102 HOH HOH A . D 3 HOH 104 404 160 HOH HOH A . D 3 HOH 105 405 120 HOH HOH A . D 3 HOH 106 406 93 HOH HOH A . D 3 HOH 107 407 94 HOH HOH A . D 3 HOH 108 408 80 HOH HOH A . D 3 HOH 109 409 158 HOH HOH A . D 3 HOH 110 410 129 HOH HOH A . D 3 HOH 111 411 138 HOH HOH A . D 3 HOH 112 412 137 HOH HOH A . D 3 HOH 113 413 100 HOH HOH A . D 3 HOH 114 414 165 HOH HOH A . D 3 HOH 115 415 117 HOH HOH A . D 3 HOH 116 416 152 HOH HOH A . D 3 HOH 117 417 118 HOH HOH A . D 3 HOH 118 418 131 HOH HOH A . D 3 HOH 119 419 97 HOH HOH A . D 3 HOH 120 420 150 HOH HOH A . D 3 HOH 121 421 92 HOH HOH A . D 3 HOH 122 422 147 HOH HOH A . D 3 HOH 123 423 128 HOH HOH A . D 3 HOH 124 424 96 HOH HOH A . D 3 HOH 125 425 162 HOH HOH A . D 3 HOH 126 426 112 HOH HOH A . D 3 HOH 127 427 142 HOH HOH A . D 3 HOH 128 428 90 HOH HOH A . D 3 HOH 129 429 143 HOH HOH A . D 3 HOH 130 430 130 HOH HOH A . D 3 HOH 131 431 122 HOH HOH A . D 3 HOH 132 432 113 HOH HOH A . D 3 HOH 133 433 154 HOH HOH A . D 3 HOH 134 434 149 HOH HOH A . D 3 HOH 135 435 123 HOH HOH A . D 3 HOH 136 436 141 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 29 A MSE 14 ? MET 'modified residue' 2 A MSE 84 A MSE 69 ? MET 'modified residue' 3 A MSE 139 A MSE 124 ? MET 'modified residue' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1500 ? 1 MORE 5 ? 1 'SSA (A^2)' 8530 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 431 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id D _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-09-16 2 'Structure model' 1 1 2015-10-28 3 'Structure model' 1 2 2017-08-23 4 'Structure model' 1 3 2017-08-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Author supporting evidence' 3 4 'Structure model' 'Author supporting evidence' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' pdbx_audit_support 2 4 'Structure model' pdbx_audit_support # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_pdbx_audit_support.funding_organization' 2 4 'Structure model' '_pdbx_audit_support.funding_organization' # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 39.7537 _pdbx_refine_tls.origin_y 30.7686 _pdbx_refine_tls.origin_z 11.0724 _pdbx_refine_tls.T[1][1] -0.0502 _pdbx_refine_tls.T[2][2] 0.0244 _pdbx_refine_tls.T[3][3] -0.0589 _pdbx_refine_tls.T[1][2] 0.0237 _pdbx_refine_tls.T[1][3] 0.0188 _pdbx_refine_tls.T[2][3] 0.0215 _pdbx_refine_tls.L[1][1] 0.8640 _pdbx_refine_tls.L[2][2] 0.5911 _pdbx_refine_tls.L[3][3] 1.1149 _pdbx_refine_tls.L[1][2] -0.1051 _pdbx_refine_tls.L[1][3] -0.8160 _pdbx_refine_tls.L[2][3] 0.0762 _pdbx_refine_tls.S[1][1] -0.0605 _pdbx_refine_tls.S[1][2] -0.0178 _pdbx_refine_tls.S[1][3] -0.0247 _pdbx_refine_tls.S[2][1] -0.0181 _pdbx_refine_tls.S[2][2] 0.0712 _pdbx_refine_tls.S[2][3] -0.0200 _pdbx_refine_tls.S[3][1] 0.0070 _pdbx_refine_tls.S[3][2] 0.1787 _pdbx_refine_tls.S[3][3] -0.0107 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id ? _pdbx_refine_tls_group.beg_auth_seq_id ? _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id ? _pdbx_refine_tls_group.end_auth_seq_id ? _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details '{ A|* }' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? BUSTER ? ? ? 2.10.1 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? SCALA ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? SHELX ? ? ? . 4 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ASN _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 103 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi 60.81 _pdbx_validate_torsion.psi 95.45 # loop_ _pdbx_distant_solvent_atoms.id _pdbx_distant_solvent_atoms.PDB_model_num _pdbx_distant_solvent_atoms.auth_atom_id _pdbx_distant_solvent_atoms.label_alt_id _pdbx_distant_solvent_atoms.auth_asym_id _pdbx_distant_solvent_atoms.auth_comp_id _pdbx_distant_solvent_atoms.auth_seq_id _pdbx_distant_solvent_atoms.PDB_ins_code _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance _pdbx_distant_solvent_atoms.neighbor_ligand_distance 1 1 O ? A HOH 435 ? 5.94 . 2 1 O ? A HOH 436 ? 7.18 . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MSE -14 ? A MSE 1 2 1 Y 1 A GLY -13 ? A GLY 2 3 1 Y 1 A SER -12 ? A SER 3 4 1 Y 1 A SER -11 ? A SER 4 5 1 Y 1 A HIS -10 ? A HIS 5 6 1 Y 1 A HIS -9 ? A HIS 6 7 1 Y 1 A HIS -8 ? A HIS 7 8 1 Y 1 A HIS -7 ? A HIS 8 9 1 Y 1 A HIS -6 ? A HIS 9 10 1 Y 1 A HIS -5 ? A HIS 10 11 1 Y 1 A SER -4 ? A SER 11 12 1 Y 1 A SER -3 ? A SER 12 13 1 Y 1 A GLY -2 ? A GLY 13 14 1 Y 1 A HIS -1 ? A HIS 14 15 1 Y 1 A ASN 155 ? A ASN 170 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Wellcome Trust' 'United Kingdom' 083625 1 'National Research Council of Argentina' Argentina ? 2 'Biotechnology and Biological Sciences Research Council' 'United Kingdom' BB/G011389/1 3 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'PALMITIC ACID' PLM 3 water HOH #