HEADER RETINOL-BINDING PROTEIN 18-DEC-14 4XCP TITLE FATTY ACID AND RETINOL BINDING PROTEIN NA-FAR-1 FROM NECATOR TITLE 2 AMERICANUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: NEMATODE FATTY ACID RETINOID BINDING PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 21-175; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: NECATOR AMERICANUS; SOURCE 3 ORGANISM_COMMON: HUMAN HOOKWORM; SOURCE 4 ORGANISM_TAXID: 51031; SOURCE 5 GENE: NECAME_14208; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: B834; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET11A KEYWDS FATTY ACID RETINOL BINDING, RETINOL-BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.GABRIELSEN,M.F.REY-BURUSCO,M.IBANEZ-SHIMABUKURO,K.GRIFFITHS, AUTHOR 2 M.W.KENNEDY,B.CORSICO,B.O.SMITH REVDAT 5 23-OCT-24 4XCP 1 ATOM REVDAT 4 30-AUG-17 4XCP 1 REMARK REVDAT 3 23-AUG-17 4XCP 1 REMARK REVDAT 2 28-OCT-15 4XCP 1 JRNL REVDAT 1 16-SEP-15 4XCP 0 JRNL AUTH M.F.REY-BURUSCO,M.IBANEZ-SHIMABUKURO,M.GABRIELSEN, JRNL AUTH 2 G.R.FRANCHINI,A.J.ROE,K.GRIFFITHS,B.ZHAN,A.COOPER, JRNL AUTH 3 M.W.KENNEDY,B.CORSICO,B.O.SMITH JRNL TITL DIVERSITY IN THE STRUCTURES AND LIGAND-BINDING SITES OF JRNL TITL 2 NEMATODE FATTY ACID AND RETINOL-BINDING PROTEINS REVEALED BY JRNL TITL 3 NA-FAR-1 FROM NECATOR AMERICANUS. JRNL REF BIOCHEM.J. V. 471 403 2015 JRNL REFN ESSN 1470-8728 JRNL PMID 26318523 JRNL DOI 10.1042/BJ20150068 REMARK 2 REMARK 2 RESOLUTION. 2.14 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.1 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.14 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.38 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 17346 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.204 REMARK 3 R VALUE (WORKING SET) : 0.203 REMARK 3 FREE R VALUE : 0.222 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.060 REMARK 3 FREE R VALUE TEST SET COUNT : 877 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 9 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.14 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.27 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.91 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2708 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.1898 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2553 REMARK 3 BIN R VALUE (WORKING SET) : 0.1861 REMARK 3 BIN FREE R VALUE : 0.2502 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.72 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 155 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1204 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 36 REMARK 3 SOLVENT ATOMS : 136 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 30.11 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.54 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.273 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.160 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.140 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.149 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.134 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.925 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.920 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 1302 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 1765 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 481 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 30 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 178 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 1302 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 155 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 1631 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 0.93 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.59 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 18.01 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|* } REMARK 3 ORIGIN FOR THE GROUP (A): 39.7537 30.7686 11.0724 REMARK 3 T TENSOR REMARK 3 T11: -0.0502 T22: 0.0244 REMARK 3 T33: -0.0589 T12: 0.0237 REMARK 3 T13: 0.0188 T23: 0.0215 REMARK 3 L TENSOR REMARK 3 L11: 0.8640 L22: 0.5911 REMARK 3 L33: 1.1149 L12: -0.1051 REMARK 3 L13: -0.8160 L23: 0.0762 REMARK 3 S TENSOR REMARK 3 S11: -0.0605 S12: -0.0178 S13: -0.0247 REMARK 3 S21: -0.0181 S22: 0.0712 S23: -0.0200 REMARK 3 S31: 0.0070 S32: 0.1787 S33: -0.0107 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4XCP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 18-DEC-14. REMARK 100 THE DEPOSITION ID IS D_1000205428. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-DEC-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.2 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17353 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.140 REMARK 200 RESOLUTION RANGE LOW (A) : 29.380 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 28.90 REMARK 200 R MERGE (I) : 0.14200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 25.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.14 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.27 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.0 REMARK 200 DATA REDUNDANCY IN SHELL : 14.50 REMARK 200 R MERGE FOR SHELL (I) : 0.78500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: CUBIC REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 72.53 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.48 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 38 % PEG 300, 100 MM PHOSPHATE CITRATE REMARK 280 PH 4.2, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 4 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z,-X,-Y REMARK 290 7555 -Z,-X,Y REMARK 290 8555 -Z,X,-Y REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z,-X REMARK 290 11555 Y,-Z,-X REMARK 290 12555 -Y,-Z,X REMARK 290 13555 Y,X,-Z REMARK 290 14555 -Y,-X,-Z REMARK 290 15555 Y,-X,Z REMARK 290 16555 -Y,X,Z REMARK 290 17555 X,Z,-Y REMARK 290 18555 -X,Z,Y REMARK 290 19555 -X,-Z,-Y REMARK 290 20555 X,-Z,Y REMARK 290 21555 Z,Y,-X REMARK 290 22555 Z,-Y,X REMARK 290 23555 -Z,Y,X REMARK 290 24555 -Z,-Y,-X REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 13 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 14 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 14 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 15 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 16 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 16 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 17 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 18 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 18 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 18 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 19 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 19 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 19 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 20 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 20 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 20 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 21 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 21 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 21 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 22 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 22 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 22 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 23 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 23 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 23 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 24 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 24 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 24 -1.000000 0.000000 0.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1500 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8530 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 5.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 431 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A -14 REMARK 465 GLY A -13 REMARK 465 SER A -12 REMARK 465 SER A -11 REMARK 465 HIS A -10 REMARK 465 HIS A -9 REMARK 465 HIS A -8 REMARK 465 HIS A -7 REMARK 465 HIS A -6 REMARK 465 HIS A -5 REMARK 465 SER A -4 REMARK 465 SER A -3 REMARK 465 GLY A -2 REMARK 465 HIS A -1 REMARK 465 ASN A 155 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 103 95.45 60.81 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 435 DISTANCE = 5.94 ANGSTROMS REMARK 525 HOH A 436 DISTANCE = 7.18 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PLM A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PLM A 202 DBREF 4XCP A 1 155 UNP W2SRJ3 W2SRJ3_NECAM 21 175 SEQADV 4XCP MSE A -14 UNP W2SRJ3 INITIATING METHIONINE SEQADV 4XCP GLY A -13 UNP W2SRJ3 EXPRESSION TAG SEQADV 4XCP SER A -12 UNP W2SRJ3 EXPRESSION TAG SEQADV 4XCP SER A -11 UNP W2SRJ3 EXPRESSION TAG SEQADV 4XCP HIS A -10 UNP W2SRJ3 EXPRESSION TAG SEQADV 4XCP HIS A -9 UNP W2SRJ3 EXPRESSION TAG SEQADV 4XCP HIS A -8 UNP W2SRJ3 EXPRESSION TAG SEQADV 4XCP HIS A -7 UNP W2SRJ3 EXPRESSION TAG SEQADV 4XCP HIS A -6 UNP W2SRJ3 EXPRESSION TAG SEQADV 4XCP HIS A -5 UNP W2SRJ3 EXPRESSION TAG SEQADV 4XCP SER A -4 UNP W2SRJ3 EXPRESSION TAG SEQADV 4XCP SER A -3 UNP W2SRJ3 EXPRESSION TAG SEQADV 4XCP GLY A -2 UNP W2SRJ3 EXPRESSION TAG SEQADV 4XCP HIS A -1 UNP W2SRJ3 EXPRESSION TAG SEQADV 4XCP MSE A 0 UNP W2SRJ3 EXPRESSION TAG SEQRES 1 A 170 MSE GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 170 HIS MSE PHE LYS TYR GLU ASP ILE PRO ALA ASP TYR ARG SEQRES 3 A 170 ASP LEU MSE PRO PRO GLU ALA ARG ASP PHE LEU GLN ASN SEQRES 4 A 170 LEU SER ASP GLY ASP LYS THR VAL LEU LYS GLU VAL PHE SEQRES 5 A 170 LYS ALA GLY PRO TYR LYS ASN THR GLU GLU SER ILE ALA SEQRES 6 A 170 ALA LEU LYS LYS LYS SER PRO GLU LEU GLY ALA LYS VAL SEQRES 7 A 170 GLU LYS LEU HIS ALA MSE VAL LYS SER LYS ILE ALA ALA SEQRES 8 A 170 LEU GLY PRO GLU ALA LYS GLY PHE ALA GLU LYS SER ILE SEQRES 9 A 170 GLU ILE ALA ARG GLY ILE LYS ALA ARG TYR TYR THR GLY SEQRES 10 A 170 ASN GLU PRO THR LYS ASP ASP LEU LYS ALA SER VAL LYS SEQRES 11 A 170 GLU VAL LEU LYS LEU TYR LYS ALA MSE SER ASP ALA GLY SEQRES 12 A 170 LYS ALA ASP PHE GLY LYS GLN PHE PRO PHE LEU ALA LYS SEQRES 13 A 170 VAL PHE GLU SER GLY LYS ALA ALA LYS PHE ALA GLY GLU SEQRES 14 A 170 ASN MODRES 4XCP MSE A 14 MET MODIFIED RESIDUE MODRES 4XCP MSE A 69 MET MODIFIED RESIDUE MODRES 4XCP MSE A 124 MET MODIFIED RESIDUE HET MSE A 0 8 HET MSE A 14 8 HET MSE A 69 8 HET MSE A 124 8 HET PLM A 201 18 HET PLM A 202 49 HETNAM MSE SELENOMETHIONINE HETNAM PLM PALMITIC ACID FORMUL 1 MSE 4(C5 H11 N O2 SE) FORMUL 2 PLM 2(C16 H32 O2) FORMUL 4 HOH *136(H2 O) HELIX 1 AA1 LYS A 2 ILE A 6 5 5 HELIX 2 AA2 PRO A 7 ASP A 12 1 6 HELIX 3 AA3 PRO A 15 LEU A 25 1 11 HELIX 4 AA4 SER A 26 ALA A 39 1 14 HELIX 5 AA5 ASN A 44 SER A 56 1 13 HELIX 6 AA6 SER A 56 ALA A 76 1 21 HELIX 7 AA7 GLY A 78 THR A 101 1 24 HELIX 8 AA8 THR A 106 MSE A 124 1 19 HELIX 9 AA9 SER A 125 PHE A 136 1 12 HELIX 10 AB1 PHE A 136 SER A 145 1 10 HELIX 11 AB2 GLY A 146 GLY A 153 1 8 LINK C MSE A 0 N PHE A 1 1555 1555 1.33 LINK C LEU A 13 N MSE A 14 1555 1555 1.34 LINK C MSE A 14 N PRO A 15 1555 1555 1.36 LINK C ALA A 68 N MSE A 69 1555 1555 1.34 LINK C MSE A 69 N VAL A 70 1555 1555 1.35 LINK C ALA A 123 N MSE A 124 1555 1555 1.35 LINK C MSE A 124 N SER A 125 1555 1555 1.35 CISPEP 1 GLY A 40 PRO A 41 0 1.18 SITE 1 AC1 9 PHE A 1 TYR A 10 ALA A 18 PHE A 21 SITE 2 AC1 9 LEU A 22 LEU A 33 LYS A 96 TYR A 99 SITE 3 AC1 9 TYR A 100 SITE 1 AC2 7 ASN A 44 THR A 45 GLU A 46 SER A 48 SITE 2 AC2 7 VAL A 63 HIS A 67 ARG A 93 CRYST1 121.123 121.123 121.123 90.00 90.00 90.00 P 4 3 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008256 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008256 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008256 0.00000 HETATM 1 N MSE A 0 21.180 24.105 11.953 1.00 47.54 N ANISOU 1 N MSE A 0 5683 6203 6176 32 355 137 N HETATM 2 CA MSE A 0 22.048 24.469 13.076 1.00 46.45 C ANISOU 2 CA MSE A 0 5604 6007 6037 102 372 191 C HETATM 3 C MSE A 0 23.397 23.712 13.041 1.00 41.23 C ANISOU 3 C MSE A 0 4999 5309 5358 118 404 177 C HETATM 4 O MSE A 0 23.446 22.477 13.098 1.00 39.71 O ANISOU 4 O MSE A 0 4831 5066 5192 98 469 140 O HETATM 5 CB MSE A 0 21.338 24.289 14.441 1.00 50.56 C ANISOU 5 CB MSE A 0 6139 6463 6609 131 425 215 C HETATM 6 CG MSE A 0 20.242 25.336 14.745 1.00 60.85 C ANISOU 6 CG MSE A 0 7396 7798 7928 143 394 250 C HETATM 7 SE MSE A 0 20.775 26.832 15.952 1.00 71.62 SE ANISOU 7 SE MSE A 0 8803 9139 9272 227 374 330 SE HETATM 8 CE MSE A 0 21.730 27.954 14.613 1.00 67.50 C ANISOU 8 CE MSE A 0 8271 8694 8681 225 293 342 C