HEADER TRANSFERASE/TRANSFERASE INHIBITOR 25-DEC-14 4XEY TITLE CRYSTAL STRUCTURE OF AN SH2-KINASE DOMAIN CONSTRUCT OF C-ABL TYROSINE TITLE 2 KINASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: TYROSINE-PROTEIN KINASE ABL1; COMPND 3 CHAIN: B, A; COMPND 4 FRAGMENT: UNP RESIDUES 119-515; COMPND 5 SYNONYM: ABELSON MURINE LEUKEMIA VIRAL ONCOGENE HOMOLOG 1,ABELSON COMPND 6 TYROSINE-PROTEIN KINASE 1,PROTO-ONCOGENE C-ABL,P150; COMPND 7 EC: 2.7.10.2; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ABL1, ABL, JTK7; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET21D KEYWDS TYROSINE KINASE, KINASE DOMAIN, SH2 DOMAIN, DASATINIB, TRANSFERASE- KEYWDS 2 TRANSFERASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR S.LORENZ,P.DENG,J.KURIYAN REVDAT 4 27-SEP-23 4XEY 1 REMARK REVDAT 3 27-SEP-17 4XEY 1 SOURCE JRNL REMARK REVDAT 2 03-JUN-15 4XEY 1 JRNL REVDAT 1 01-APR-15 4XEY 0 JRNL AUTH S.LORENZ,P.DENG,O.HANTSCHEL,G.SUPERTI-FURGA,J.KURIYAN JRNL TITL CRYSTAL STRUCTURE OF AN SH2-KINASE CONSTRUCT OF C-ABL AND JRNL TITL 2 EFFECT OF THE SH2 DOMAIN ON KINASE ACTIVITY. JRNL REF BIOCHEM.J. V. 468 283 2015 JRNL REFN ESSN 1470-8728 JRNL PMID 25779001 JRNL DOI 10.1042/BJ20141492 REMARK 2 REMARK 2 RESOLUTION. 2.89 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.9_1692) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.89 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.80 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 18647 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.232 REMARK 3 R VALUE (WORKING SET) : 0.231 REMARK 3 FREE R VALUE : 0.259 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.130 REMARK 3 FREE R VALUE TEST SET COUNT : 957 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.8055 - 5.5277 1.00 2677 147 0.2145 0.2257 REMARK 3 2 5.5277 - 4.3885 1.00 2577 126 0.2076 0.2367 REMARK 3 3 4.3885 - 3.8341 1.00 2534 128 0.2158 0.2342 REMARK 3 4 3.8341 - 3.4837 1.00 2514 135 0.2278 0.2858 REMARK 3 5 3.4837 - 3.2340 1.00 2503 127 0.2515 0.2936 REMARK 3 6 3.2340 - 3.0434 1.00 2479 151 0.2858 0.3130 REMARK 3 7 3.0434 - 2.8910 0.97 2406 143 0.3001 0.3084 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.350 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.760 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 5315 REMARK 3 ANGLE : 0.805 7195 REMARK 3 CHIRALITY : 0.029 762 REMARK 3 PLANARITY : 0.003 902 REMARK 3 DIHEDRAL : 14.196 1971 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN 'B' AND RESID 141 THROUGH 238) REMARK 3 ORIGIN FOR THE GROUP (A): -18.2156 -14.2157 -17.3085 REMARK 3 T TENSOR REMARK 3 T11: 0.8139 T22: 1.1881 REMARK 3 T33: 1.0322 T12: 0.1505 REMARK 3 T13: 0.1564 T23: 0.0273 REMARK 3 L TENSOR REMARK 3 L11: 0.0345 L22: 0.2615 REMARK 3 L33: 0.1091 L12: 0.0747 REMARK 3 L13: -0.0275 L23: 0.0740 REMARK 3 S TENSOR REMARK 3 S11: 0.1674 S12: 0.1211 S13: 0.2261 REMARK 3 S21: -0.6558 S22: -0.2848 S23: -0.7977 REMARK 3 S31: 0.1157 S32: 0.9471 S33: -0.0000 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN 'A' AND RESID 250 THROUGH 522) REMARK 3 ORIGIN FOR THE GROUP (A): -16.8443 -43.0465 12.8914 REMARK 3 T TENSOR REMARK 3 T11: 0.2567 T22: 0.2730 REMARK 3 T33: 0.3000 T12: 0.0393 REMARK 3 T13: -0.0073 T23: 0.0115 REMARK 3 L TENSOR REMARK 3 L11: 1.9949 L22: 2.5517 REMARK 3 L33: 1.9904 L12: -0.4505 REMARK 3 L13: -0.1828 L23: 0.3730 REMARK 3 S TENSOR REMARK 3 S11: -0.0298 S12: -0.0940 S13: 0.2952 REMARK 3 S21: 0.0351 S22: -0.0321 S23: -0.1675 REMARK 3 S31: -0.3337 S32: 0.1497 S33: 0.0000 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN 'B' AND RESID 251 THROUGH 523) REMARK 3 ORIGIN FOR THE GROUP (A): -45.9946 -19.5668 13.1690 REMARK 3 T TENSOR REMARK 3 T11: 0.1847 T22: 0.1791 REMARK 3 T33: 0.1969 T12: 0.0530 REMARK 3 T13: -0.0012 T23: -0.0309 REMARK 3 L TENSOR REMARK 3 L11: 0.8293 L22: 1.6338 REMARK 3 L33: 2.5763 L12: 0.1007 REMARK 3 L13: -0.1452 L23: -0.2255 REMARK 3 S TENSOR REMARK 3 S11: -0.0047 S12: 0.0373 S13: -0.0651 REMARK 3 S21: -0.0476 S22: 0.0127 S23: -0.1152 REMARK 3 S31: 0.2487 S32: 0.2071 S33: 0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4XEY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-DEC-14. REMARK 100 THE DEPOSITION ID IS D_1000205160. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-DEC-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.3.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.1159 REMARK 200 MONOCHROMATOR : DOUBLE FLAT CRYSTAL SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 2.3.6 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 2.3.6 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18720 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.890 REMARK 200 RESOLUTION RANGE LOW (A) : 46.960 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.14500 REMARK 200 FOR THE DATA SET : 9.2400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.89 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : 4.00 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2GQG,1OPK REMARK 200 REMARK 200 REMARK: NEEDLE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.72 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.15 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M SODIUM CITRATE, 8% PEG 8000, PH REMARK 280 5.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 57.05900 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 62.72450 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 57.05900 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 62.72450 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET B 135 REMARK 465 ALA B 136 REMARK 465 SER B 137 REMARK 465 VAL B 138 REMARK 465 ASN B 139 REMARK 465 SER B 140 REMARK 465 SER B 206 REMARK 465 SER B 207 REMARK 465 GLU B 208 REMARK 465 ARG B 239 REMARK 465 ASN B 240 REMARK 465 LYS B 241 REMARK 465 PRO B 242 REMARK 465 THR B 243 REMARK 465 VAL B 244 REMARK 465 TYR B 245 REMARK 465 GLY B 246 REMARK 465 VAL B 247 REMARK 465 SER B 248 REMARK 465 PRO B 249 REMARK 465 ASN B 250 REMARK 465 GLY B 268 REMARK 465 GLY B 269 REMARK 465 GLY B 270 REMARK 465 GLN B 271 REMARK 465 TYR B 272 REMARK 465 GLY B 273 REMARK 465 LYS B 293 REMARK 465 GLU B 294 REMARK 465 ASP B 295 REMARK 465 GLU B 524 REMARK 465 VAL B 525 REMARK 465 GLU B 526 REMARK 465 LYS B 527 REMARK 465 GLU B 528 REMARK 465 LEU B 529 REMARK 465 GLY B 530 REMARK 465 LYS B 531 REMARK 465 GLN B 532 REMARK 465 GLY B 533 REMARK 465 VAL B 534 REMARK 465 LEU B 535 REMARK 465 GLU B 536 REMARK 465 HIS B 537 REMARK 465 HIS B 538 REMARK 465 HIS B 539 REMARK 465 HIS B 540 REMARK 465 HIS B 541 REMARK 465 HIS B 542 REMARK 465 MET A 135 REMARK 465 ALA A 136 REMARK 465 SER A 137 REMARK 465 VAL A 138 REMARK 465 ASN A 139 REMARK 465 SER A 140 REMARK 465 LEU A 141 REMARK 465 GLU A 142 REMARK 465 LYS A 143 REMARK 465 HIS A 144 REMARK 465 SER A 145 REMARK 465 TRP A 146 REMARK 465 TYR A 147 REMARK 465 HIS A 148 REMARK 465 GLY A 149 REMARK 465 PRO A 150 REMARK 465 VAL A 151 REMARK 465 SER A 152 REMARK 465 ARG A 153 REMARK 465 ASN A 154 REMARK 465 ALA A 155 REMARK 465 ALA A 156 REMARK 465 GLU A 157 REMARK 465 TYR A 158 REMARK 465 LEU A 159 REMARK 465 LEU A 160 REMARK 465 SER A 161 REMARK 465 SER A 162 REMARK 465 GLY A 163 REMARK 465 ILE A 164 REMARK 465 ASN A 165 REMARK 465 GLY A 166 REMARK 465 SER A 167 REMARK 465 PHE A 168 REMARK 465 LEU A 169 REMARK 465 VAL A 170 REMARK 465 ARG A 171 REMARK 465 GLU A 172 REMARK 465 SER A 173 REMARK 465 GLU A 174 REMARK 465 SER A 175 REMARK 465 SER A 176 REMARK 465 PRO A 177 REMARK 465 GLY A 178 REMARK 465 GLN A 179 REMARK 465 ARG A 180 REMARK 465 SER A 181 REMARK 465 ILE A 182 REMARK 465 SER A 183 REMARK 465 LEU A 184 REMARK 465 ARG A 185 REMARK 465 TYR A 186 REMARK 465 GLU A 187 REMARK 465 GLY A 188 REMARK 465 ARG A 189 REMARK 465 VAL A 190 REMARK 465 TYR A 191 REMARK 465 HIS A 192 REMARK 465 TYR A 193 REMARK 465 ARG A 194 REMARK 465 ILE A 195 REMARK 465 ASN A 196 REMARK 465 THR A 197 REMARK 465 ALA A 198 REMARK 465 SER A 199 REMARK 465 ASP A 200 REMARK 465 GLY A 201 REMARK 465 LYS A 202 REMARK 465 LEU A 203 REMARK 465 TYR A 204 REMARK 465 VAL A 205 REMARK 465 SER A 206 REMARK 465 SER A 207 REMARK 465 GLU A 208 REMARK 465 SER A 209 REMARK 465 ARG A 210 REMARK 465 PHE A 211 REMARK 465 ASN A 212 REMARK 465 THR A 213 REMARK 465 LEU A 214 REMARK 465 ALA A 215 REMARK 465 GLU A 216 REMARK 465 LEU A 217 REMARK 465 VAL A 218 REMARK 465 HIS A 219 REMARK 465 HIS A 220 REMARK 465 HIS A 221 REMARK 465 SER A 222 REMARK 465 THR A 223 REMARK 465 VAL A 224 REMARK 465 ALA A 225 REMARK 465 ASP A 226 REMARK 465 GLY A 227 REMARK 465 LEU A 228 REMARK 465 ILE A 229 REMARK 465 THR A 230 REMARK 465 THR A 231 REMARK 465 LEU A 232 REMARK 465 HIS A 233 REMARK 465 TYR A 234 REMARK 465 PRO A 235 REMARK 465 ALA A 236 REMARK 465 PRO A 237 REMARK 465 LYS A 238 REMARK 465 ARG A 239 REMARK 465 ASN A 240 REMARK 465 LYS A 241 REMARK 465 PRO A 242 REMARK 465 THR A 243 REMARK 465 VAL A 244 REMARK 465 TYR A 245 REMARK 465 GLY A 246 REMARK 465 VAL A 247 REMARK 465 SER A 248 REMARK 465 PRO A 249 REMARK 465 GLY A 270 REMARK 465 GLN A 271 REMARK 465 TYR A 272 REMARK 465 GLY A 273 REMARK 465 ASP A 523 REMARK 465 GLU A 524 REMARK 465 VAL A 525 REMARK 465 GLU A 526 REMARK 465 LYS A 527 REMARK 465 GLU A 528 REMARK 465 LEU A 529 REMARK 465 GLY A 530 REMARK 465 LYS A 531 REMARK 465 GLN A 532 REMARK 465 GLY A 533 REMARK 465 VAL A 534 REMARK 465 LEU A 535 REMARK 465 GLU A 536 REMARK 465 HIS A 537 REMARK 465 HIS A 538 REMARK 465 HIS A 539 REMARK 465 HIS A 540 REMARK 465 HIS A 541 REMARK 465 HIS A 542 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH2 ARG B 189 OH TYR B 191 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER B 145 -39.65 -34.89 REMARK 500 SER B 161 3.58 -66.29 REMARK 500 ILE B 164 -168.21 -123.77 REMARK 500 HIS B 233 -60.37 -90.49 REMARK 500 LYS B 264 -66.54 -104.91 REMARK 500 THR B 408 -66.23 -126.77 REMARK 500 PRO B 421 99.47 -66.44 REMARK 500 TYR B 459 56.29 36.77 REMARK 500 ASP A 260 2.40 -68.70 REMARK 500 LYS A 264 -64.91 -104.53 REMARK 500 PRO A 421 98.18 -62.13 REMARK 500 TYR A 459 55.10 36.12 REMARK 500 LYS A 473 30.28 -95.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 1N1 B 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 1N1 A 601 DBREF 4XEY B 138 534 UNP P00519 ABL1_HUMAN 119 515 DBREF 4XEY A 138 534 UNP P00519 ABL1_HUMAN 119 515 SEQADV 4XEY MET B 135 UNP P00519 EXPRESSION TAG SEQADV 4XEY ALA B 136 UNP P00519 EXPRESSION TAG SEQADV 4XEY SER B 137 UNP P00519 EXPRESSION TAG SEQADV 4XEY LEU B 535 UNP P00519 EXPRESSION TAG SEQADV 4XEY GLU B 536 UNP P00519 EXPRESSION TAG SEQADV 4XEY HIS B 537 UNP P00519 EXPRESSION TAG SEQADV 4XEY HIS B 538 UNP P00519 EXPRESSION TAG SEQADV 4XEY HIS B 539 UNP P00519 EXPRESSION TAG SEQADV 4XEY HIS B 540 UNP P00519 EXPRESSION TAG SEQADV 4XEY HIS B 541 UNP P00519 EXPRESSION TAG SEQADV 4XEY HIS B 542 UNP P00519 EXPRESSION TAG SEQADV 4XEY MET A 135 UNP P00519 EXPRESSION TAG SEQADV 4XEY ALA A 136 UNP P00519 EXPRESSION TAG SEQADV 4XEY SER A 137 UNP P00519 EXPRESSION TAG SEQADV 4XEY LEU A 535 UNP P00519 EXPRESSION TAG SEQADV 4XEY GLU A 536 UNP P00519 EXPRESSION TAG SEQADV 4XEY HIS A 537 UNP P00519 EXPRESSION TAG SEQADV 4XEY HIS A 538 UNP P00519 EXPRESSION TAG SEQADV 4XEY HIS A 539 UNP P00519 EXPRESSION TAG SEQADV 4XEY HIS A 540 UNP P00519 EXPRESSION TAG SEQADV 4XEY HIS A 541 UNP P00519 EXPRESSION TAG SEQADV 4XEY HIS A 542 UNP P00519 EXPRESSION TAG SEQRES 1 B 408 MET ALA SER VAL ASN SER LEU GLU LYS HIS SER TRP TYR SEQRES 2 B 408 HIS GLY PRO VAL SER ARG ASN ALA ALA GLU TYR LEU LEU SEQRES 3 B 408 SER SER GLY ILE ASN GLY SER PHE LEU VAL ARG GLU SER SEQRES 4 B 408 GLU SER SER PRO GLY GLN ARG SER ILE SER LEU ARG TYR SEQRES 5 B 408 GLU GLY ARG VAL TYR HIS TYR ARG ILE ASN THR ALA SER SEQRES 6 B 408 ASP GLY LYS LEU TYR VAL SER SER GLU SER ARG PHE ASN SEQRES 7 B 408 THR LEU ALA GLU LEU VAL HIS HIS HIS SER THR VAL ALA SEQRES 8 B 408 ASP GLY LEU ILE THR THR LEU HIS TYR PRO ALA PRO LYS SEQRES 9 B 408 ARG ASN LYS PRO THR VAL TYR GLY VAL SER PRO ASN TYR SEQRES 10 B 408 ASP LYS TRP GLU MET GLU ARG THR ASP ILE THR MET LYS SEQRES 11 B 408 HIS LYS LEU GLY GLY GLY GLN TYR GLY GLU VAL TYR GLU SEQRES 12 B 408 GLY VAL TRP LYS LYS TYR SER LEU THR VAL ALA VAL LYS SEQRES 13 B 408 THR LEU LYS GLU ASP THR MET GLU VAL GLU GLU PHE LEU SEQRES 14 B 408 LYS GLU ALA ALA VAL MET LYS GLU ILE LYS HIS PRO ASN SEQRES 15 B 408 LEU VAL GLN LEU LEU GLY VAL CYS THR ARG GLU PRO PRO SEQRES 16 B 408 PHE TYR ILE ILE THR GLU PHE MET THR TYR GLY ASN LEU SEQRES 17 B 408 LEU ASP TYR LEU ARG GLU CYS ASN ARG GLN GLU VAL ASN SEQRES 18 B 408 ALA VAL VAL LEU LEU TYR MET ALA THR GLN ILE SER SER SEQRES 19 B 408 ALA MET GLU TYR LEU GLU LYS LYS ASN PHE ILE HIS ARG SEQRES 20 B 408 ASP LEU ALA ALA ARG ASN CYS LEU VAL GLY GLU ASN HIS SEQRES 21 B 408 LEU VAL LYS VAL ALA ASP PHE GLY LEU SER ARG LEU MET SEQRES 22 B 408 THR GLY ASP THR TYR THR ALA HIS ALA GLY ALA LYS PHE SEQRES 23 B 408 PRO ILE LYS TRP THR ALA PRO GLU SER LEU ALA TYR ASN SEQRES 24 B 408 LYS PHE SER ILE LYS SER ASP VAL TRP ALA PHE GLY VAL SEQRES 25 B 408 LEU LEU TRP GLU ILE ALA THR TYR GLY MET SER PRO TYR SEQRES 26 B 408 PRO GLY ILE ASP LEU SER GLN VAL TYR GLU LEU LEU GLU SEQRES 27 B 408 LYS ASP TYR ARG MET GLU ARG PRO GLU GLY CYS PRO GLU SEQRES 28 B 408 LYS VAL TYR GLU LEU MET ARG ALA CYS TRP GLN TRP ASN SEQRES 29 B 408 PRO SER ASP ARG PRO SER PHE ALA GLU ILE HIS GLN ALA SEQRES 30 B 408 PHE GLU THR MET PHE GLN GLU SER SER ILE SER ASP GLU SEQRES 31 B 408 VAL GLU LYS GLU LEU GLY LYS GLN GLY VAL LEU GLU HIS SEQRES 32 B 408 HIS HIS HIS HIS HIS SEQRES 1 A 408 MET ALA SER VAL ASN SER LEU GLU LYS HIS SER TRP TYR SEQRES 2 A 408 HIS GLY PRO VAL SER ARG ASN ALA ALA GLU TYR LEU LEU SEQRES 3 A 408 SER SER GLY ILE ASN GLY SER PHE LEU VAL ARG GLU SER SEQRES 4 A 408 GLU SER SER PRO GLY GLN ARG SER ILE SER LEU ARG TYR SEQRES 5 A 408 GLU GLY ARG VAL TYR HIS TYR ARG ILE ASN THR ALA SER SEQRES 6 A 408 ASP GLY LYS LEU TYR VAL SER SER GLU SER ARG PHE ASN SEQRES 7 A 408 THR LEU ALA GLU LEU VAL HIS HIS HIS SER THR VAL ALA SEQRES 8 A 408 ASP GLY LEU ILE THR THR LEU HIS TYR PRO ALA PRO LYS SEQRES 9 A 408 ARG ASN LYS PRO THR VAL TYR GLY VAL SER PRO ASN TYR SEQRES 10 A 408 ASP LYS TRP GLU MET GLU ARG THR ASP ILE THR MET LYS SEQRES 11 A 408 HIS LYS LEU GLY GLY GLY GLN TYR GLY GLU VAL TYR GLU SEQRES 12 A 408 GLY VAL TRP LYS LYS TYR SER LEU THR VAL ALA VAL LYS SEQRES 13 A 408 THR LEU LYS GLU ASP THR MET GLU VAL GLU GLU PHE LEU SEQRES 14 A 408 LYS GLU ALA ALA VAL MET LYS GLU ILE LYS HIS PRO ASN SEQRES 15 A 408 LEU VAL GLN LEU LEU GLY VAL CYS THR ARG GLU PRO PRO SEQRES 16 A 408 PHE TYR ILE ILE THR GLU PHE MET THR TYR GLY ASN LEU SEQRES 17 A 408 LEU ASP TYR LEU ARG GLU CYS ASN ARG GLN GLU VAL ASN SEQRES 18 A 408 ALA VAL VAL LEU LEU TYR MET ALA THR GLN ILE SER SER SEQRES 19 A 408 ALA MET GLU TYR LEU GLU LYS LYS ASN PHE ILE HIS ARG SEQRES 20 A 408 ASP LEU ALA ALA ARG ASN CYS LEU VAL GLY GLU ASN HIS SEQRES 21 A 408 LEU VAL LYS VAL ALA ASP PHE GLY LEU SER ARG LEU MET SEQRES 22 A 408 THR GLY ASP THR TYR THR ALA HIS ALA GLY ALA LYS PHE SEQRES 23 A 408 PRO ILE LYS TRP THR ALA PRO GLU SER LEU ALA TYR ASN SEQRES 24 A 408 LYS PHE SER ILE LYS SER ASP VAL TRP ALA PHE GLY VAL SEQRES 25 A 408 LEU LEU TRP GLU ILE ALA THR TYR GLY MET SER PRO TYR SEQRES 26 A 408 PRO GLY ILE ASP LEU SER GLN VAL TYR GLU LEU LEU GLU SEQRES 27 A 408 LYS ASP TYR ARG MET GLU ARG PRO GLU GLY CYS PRO GLU SEQRES 28 A 408 LYS VAL TYR GLU LEU MET ARG ALA CYS TRP GLN TRP ASN SEQRES 29 A 408 PRO SER ASP ARG PRO SER PHE ALA GLU ILE HIS GLN ALA SEQRES 30 A 408 PHE GLU THR MET PHE GLN GLU SER SER ILE SER ASP GLU SEQRES 31 A 408 VAL GLU LYS GLU LEU GLY LYS GLN GLY VAL LEU GLU HIS SEQRES 32 A 408 HIS HIS HIS HIS HIS HET 1N1 B 601 33 HET 1N1 A 601 33 HETNAM 1N1 N-(2-CHLORO-6-METHYLPHENYL)-2-({6-[4-(2-HYDROXYETHYL) HETNAM 2 1N1 PIPERAZIN-1-YL]-2-METHYLPYRIMIDIN-4-YL}AMINO)-1,3- HETNAM 3 1N1 THIAZOLE-5-CARBOXAMIDE HETSYN 1N1 DASATINIB FORMUL 3 1N1 2(C22 H26 CL N7 O2 S) HELIX 1 AA1 SER B 152 SER B 161 1 10 HELIX 2 AA2 THR B 213 SER B 222 1 10 HELIX 3 AA3 MET B 297 ILE B 312 1 16 HELIX 4 AA4 LEU B 342 CYS B 349 1 8 HELIX 5 AA5 ASN B 355 LYS B 376 1 22 HELIX 6 AA6 ALA B 384 ARG B 386 5 3 HELIX 7 AA7 GLU B 392 HIS B 394 5 3 HELIX 8 AA8 ALA B 426 ASN B 433 1 8 HELIX 9 AA9 SER B 436 THR B 453 1 18 HELIX 10 AB1 ASP B 463 SER B 465 5 3 HELIX 11 AB2 GLN B 466 LYS B 473 1 8 HELIX 12 AB3 PRO B 484 TRP B 495 1 12 HELIX 13 AB4 ASN B 498 ARG B 502 5 5 HELIX 14 AB5 SER B 504 ASP B 523 1 20 HELIX 15 AB6 GLU A 257 THR A 259 5 3 HELIX 16 AB7 GLU A 298 ILE A 312 1 15 HELIX 17 AB8 LEU A 342 CYS A 349 1 8 HELIX 18 AB9 ASN A 355 LYS A 376 1 22 HELIX 19 AC1 ALA A 384 ARG A 386 5 3 HELIX 20 AC2 GLU A 392 HIS A 394 5 3 HELIX 21 AC3 ALA A 426 ASN A 433 1 8 HELIX 22 AC4 SER A 436 THR A 453 1 18 HELIX 23 AC5 ASP A 463 SER A 465 5 3 HELIX 24 AC6 GLN A 466 LYS A 473 1 8 HELIX 25 AC7 PRO A 484 TRP A 495 1 12 HELIX 26 AC8 ASN A 498 ARG A 502 5 5 HELIX 27 AC9 SER A 504 SER A 522 1 19 SHEET 1 AA1 4 TYR B 147 PRO B 150 0 SHEET 2 AA1 4 PHE B 168 GLU B 172 1 O VAL B 170 N HIS B 148 SHEET 3 AA1 4 ARG B 180 TYR B 186 -1 O SER B 181 N ARG B 171 SHEET 4 AA1 4 ARG B 189 ARG B 194 -1 O TYR B 191 N LEU B 184 SHEET 1 AA2 2 ASN B 196 ALA B 198 0 SHEET 2 AA2 2 LYS B 202 TYR B 204 -1 O TYR B 204 N ASN B 196 SHEET 1 AA3 5 ILE B 261 LYS B 266 0 SHEET 2 AA3 5 VAL B 275 TRP B 280 -1 O VAL B 279 N THR B 262 SHEET 3 AA3 5 LEU B 285 LYS B 290 -1 O LEU B 285 N TRP B 280 SHEET 4 AA3 5 TYR B 331 GLU B 335 -1 O THR B 334 N ALA B 288 SHEET 5 AA3 5 LEU B 320 CYS B 324 -1 N GLY B 322 O ILE B 333 SHEET 1 AA4 3 GLY B 340 ASN B 341 0 SHEET 2 AA4 3 CYS B 388 GLY B 391 -1 O VAL B 390 N GLY B 340 SHEET 3 AA4 3 LEU B 395 VAL B 398 -1 O LYS B 397 N LEU B 389 SHEET 1 AA5 2 PHE B 378 HIS B 380 0 SHEET 2 AA5 2 LEU B 403 ARG B 405 -1 O SER B 404 N ILE B 379 SHEET 1 AA6 2 TYR B 412 THR B 413 0 SHEET 2 AA6 2 LYS B 434 PHE B 435 -1 O PHE B 435 N TYR B 412 SHEET 1 AA7 5 ILE A 261 GLY A 268 0 SHEET 2 AA7 5 VAL A 275 TRP A 280 -1 O VAL A 279 N THR A 262 SHEET 3 AA7 5 LEU A 285 LYS A 290 -1 O VAL A 287 N GLY A 278 SHEET 4 AA7 5 TYR A 331 GLU A 335 -1 O THR A 334 N ALA A 288 SHEET 5 AA7 5 LEU A 320 CYS A 324 -1 N GLY A 322 O ILE A 333 SHEET 1 AA8 3 GLY A 340 ASN A 341 0 SHEET 2 AA8 3 CYS A 388 GLY A 391 -1 O VAL A 390 N GLY A 340 SHEET 3 AA8 3 LEU A 395 VAL A 398 -1 O LYS A 397 N LEU A 389 SHEET 1 AA9 2 PHE A 378 HIS A 380 0 SHEET 2 AA9 2 LEU A 403 ARG A 405 -1 O SER A 404 N ILE A 379 SHEET 1 AB1 2 TYR A 412 THR A 413 0 SHEET 2 AB1 2 LYS A 434 PHE A 435 -1 O PHE A 435 N TYR A 412 CISPEP 1 PRO B 328 PRO B 329 0 0.12 CISPEP 2 PRO A 328 PRO A 329 0 -0.62 SITE 1 AC1 14 LEU B 267 ALA B 288 LYS B 290 MET B 309 SITE 2 AC1 14 ILE B 332 THR B 334 GLU B 335 MET B 337 SITE 3 AC1 14 THR B 338 TYR B 339 GLY B 340 LEU B 389 SITE 4 AC1 14 ALA B 399 PHE B 401 SITE 1 AC2 15 LEU A 267 ALA A 288 LYS A 290 MET A 309 SITE 2 AC2 15 ILE A 332 THR A 334 GLU A 335 PHE A 336 SITE 3 AC2 15 MET A 337 THR A 338 GLY A 340 LEU A 389 SITE 4 AC2 15 ALA A 399 ASP A 400 LEU B 141 CRYST1 114.118 125.449 56.232 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008763 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007971 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017783 0.00000