HEADER LIGASE 26-DEC-14 4XFD TITLE CRYSTAL STRUCTURE OF A NH(3)-DEPENDENT NAD(+) SYNTHETASE FROM TITLE 2 PSEUDOMONAS AERUGINOSA COMPND MOL_ID: 1; COMPND 2 MOLECULE: NH(3)-DEPENDENT NAD(+) SYNTHETASE; COMPND 3 CHAIN: A; COMPND 4 EC: 6.3.1.5; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; SOURCE 3 ORGANISM_TAXID: 208964; SOURCE 4 STRAIN: ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228; SOURCE 5 GENE: NADE, PA4920; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PSAEA.00025.A.B1 KEYWDS COFACTOR BIOSYNTHESIS, LIGASE, ATP-BINDING, STRUCTURAL GENOMICS, KEYWDS 2 SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE, SSGCID EXPDTA X-RAY DIFFRACTION AUTHOR SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE (SSGCID) REVDAT 3 28-FEB-24 4XFD 1 REMARK REVDAT 2 22-NOV-17 4XFD 1 SOURCE REMARK REVDAT 1 14-JAN-15 4XFD 0 JRNL AUTH D.M.DRANOW,D.LORIMER,T.E.EDWARDS JRNL TITL CRYSTAL STRUCTURE OF A NH(3)-DEPENDENT NAD(+) SYNTHETASE JRNL TITL 2 FROM PSEUDOMONAS AERUGINOSA JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.55 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.55 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 31.64 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.3 REMARK 3 NUMBER OF REFLECTIONS : 37260 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.170 REMARK 3 R VALUE (WORKING SET) : 0.169 REMARK 3 FREE R VALUE : 0.199 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.920 REMARK 3 FREE R VALUE TEST SET COUNT : 1834 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 31.6481 - 3.6429 0.98 2960 154 0.1525 0.1799 REMARK 3 2 3.6429 - 2.8921 0.99 2956 153 0.1538 0.1764 REMARK 3 3 2.8921 - 2.5267 0.99 2899 161 0.1625 0.1993 REMARK 3 4 2.5267 - 2.2957 0.99 2849 158 0.1608 0.1995 REMARK 3 5 2.2957 - 2.1312 0.98 2886 134 0.1548 0.1783 REMARK 3 6 2.1312 - 2.0056 0.97 2835 158 0.1589 0.1899 REMARK 3 7 2.0056 - 1.9052 0.96 2750 158 0.1765 0.1903 REMARK 3 8 1.9052 - 1.8222 0.93 2703 139 0.1926 0.2321 REMARK 3 9 1.8222 - 1.7521 0.91 2639 131 0.1954 0.2238 REMARK 3 10 1.7521 - 1.6916 0.88 2578 109 0.2009 0.2257 REMARK 3 11 1.6916 - 1.6388 0.86 2535 128 0.2265 0.2613 REMARK 3 12 1.6388 - 1.5919 0.85 2448 128 0.2535 0.3425 REMARK 3 13 1.5919 - 1.5500 0.82 2388 123 0.2819 0.3419 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.190 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.500 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 15.51 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.56 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.012 2061 REMARK 3 ANGLE : 1.229 2809 REMARK 3 CHIRALITY : 0.064 322 REMARK 3 PLANARITY : 0.007 383 REMARK 3 DIHEDRAL : 13.884 770 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ( CHAIN A AND RESID -4:20 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.5590 -21.6900 17.9766 REMARK 3 T TENSOR REMARK 3 T11: 0.2737 T22: 0.1714 REMARK 3 T33: 0.1895 T12: 0.0379 REMARK 3 T13: 0.0141 T23: 0.0547 REMARK 3 L TENSOR REMARK 3 L11: 5.9380 L22: 3.7029 REMARK 3 L33: 5.2664 L12: -0.3597 REMARK 3 L13: 3.3365 L23: 1.8033 REMARK 3 S TENSOR REMARK 3 S11: 0.4009 S12: -0.3834 S13: -0.7003 REMARK 3 S21: 0.0468 S22: -0.4588 S23: -0.0000 REMARK 3 S31: 0.5295 S32: -0.0013 S33: 0.0005 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: ( CHAIN A AND RESID 21:42 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.7021 -11.7663 14.5429 REMARK 3 T TENSOR REMARK 3 T11: 0.1296 T22: 0.1982 REMARK 3 T33: 0.1234 T12: 0.0261 REMARK 3 T13: -0.0235 T23: 0.0356 REMARK 3 L TENSOR REMARK 3 L11: 1.2822 L22: 4.4906 REMARK 3 L33: 2.5695 L12: 0.6401 REMARK 3 L13: -0.1674 L23: -3.2278 REMARK 3 S TENSOR REMARK 3 S11: -0.0085 S12: -0.3880 S13: -0.1639 REMARK 3 S21: -0.0247 S22: 0.1179 S23: 0.0016 REMARK 3 S31: 0.4059 S32: -0.0280 S33: -0.0377 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: ( CHAIN A AND RESID 43:75 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.0744 -0.7509 14.0453 REMARK 3 T TENSOR REMARK 3 T11: 0.1224 T22: 0.1614 REMARK 3 T33: 0.1277 T12: -0.0167 REMARK 3 T13: -0.0169 T23: -0.0448 REMARK 3 L TENSOR REMARK 3 L11: 4.2318 L22: 1.7683 REMARK 3 L33: 2.3605 L12: -0.4795 REMARK 3 L13: -0.8729 L23: 0.3365 REMARK 3 S TENSOR REMARK 3 S11: 0.0633 S12: -0.4504 S13: 0.2038 REMARK 3 S21: 0.0731 S22: -0.0162 S23: -0.1255 REMARK 3 S31: 0.0326 S32: 0.1355 S33: -0.0412 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: ( CHAIN A AND RESID 76:91 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.4205 7.1865 11.5844 REMARK 3 T TENSOR REMARK 3 T11: 0.1710 T22: 0.1701 REMARK 3 T33: 0.2371 T12: -0.0097 REMARK 3 T13: -0.0144 T23: -0.1045 REMARK 3 L TENSOR REMARK 3 L11: 4.0401 L22: 4.4368 REMARK 3 L33: 1.7680 L12: -3.4565 REMARK 3 L13: -0.3060 L23: -0.2574 REMARK 3 S TENSOR REMARK 3 S11: -0.1479 S12: -0.3537 S13: 0.6251 REMARK 3 S21: 0.2110 S22: 0.1040 S23: -0.0411 REMARK 3 S31: -0.2059 S32: -0.0120 S33: -0.0535 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: ( CHAIN A AND RESID 92:115 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.8390 10.5111 18.0430 REMARK 3 T TENSOR REMARK 3 T11: 0.2282 T22: 0.3176 REMARK 3 T33: 0.2302 T12: 0.0042 REMARK 3 T13: 0.0070 T23: -0.1341 REMARK 3 L TENSOR REMARK 3 L11: 0.0687 L22: 2.0250 REMARK 3 L33: 2.4257 L12: 0.1027 REMARK 3 L13: 0.2917 L23: -1.0663 REMARK 3 S TENSOR REMARK 3 S11: -0.0488 S12: -0.5865 S13: 0.4072 REMARK 3 S21: 0.4050 S22: 0.1107 S23: 0.0558 REMARK 3 S31: -0.2743 S32: -0.1506 S33: -0.0577 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: ( CHAIN A AND RESID 116:133 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.2914 16.8624 0.7095 REMARK 3 T TENSOR REMARK 3 T11: 0.1857 T22: 0.1128 REMARK 3 T33: 0.3344 T12: 0.0554 REMARK 3 T13: 0.0189 T23: 0.0247 REMARK 3 L TENSOR REMARK 3 L11: 1.4878 L22: 2.7720 REMARK 3 L33: 2.3567 L12: 1.9053 REMARK 3 L13: 0.1954 L23: 1.1296 REMARK 3 S TENSOR REMARK 3 S11: 0.0788 S12: 0.0493 S13: 0.5094 REMARK 3 S21: -0.1596 S22: -0.0577 S23: 0.1158 REMARK 3 S31: -0.3374 S32: -0.2296 S33: 0.0701 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: ( CHAIN A AND RESID 134:195 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.6659 1.3110 8.1368 REMARK 3 T TENSOR REMARK 3 T11: 0.1161 T22: 0.0878 REMARK 3 T33: 0.1265 T12: -0.0109 REMARK 3 T13: -0.0030 T23: -0.0223 REMARK 3 L TENSOR REMARK 3 L11: 0.6336 L22: 0.2977 REMARK 3 L33: 0.6673 L12: -0.1919 REMARK 3 L13: 0.0140 L23: -0.2706 REMARK 3 S TENSOR REMARK 3 S11: 0.0398 S12: -0.1933 S13: 0.1581 REMARK 3 S21: 0.0165 S22: 0.0093 S23: 0.0837 REMARK 3 S31: -0.0390 S32: -0.0030 S33: -0.0539 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: ( CHAIN A AND RESID 196:237 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.2819 -3.8492 26.5848 REMARK 3 T TENSOR REMARK 3 T11: 0.2391 T22: 0.3833 REMARK 3 T33: 0.1366 T12: 0.0005 REMARK 3 T13: 0.0063 T23: -0.0489 REMARK 3 L TENSOR REMARK 3 L11: 2.9657 L22: 2.0385 REMARK 3 L33: 0.7634 L12: 1.3153 REMARK 3 L13: 0.6290 L23: 0.1084 REMARK 3 S TENSOR REMARK 3 S11: 0.0688 S12: -0.7227 S13: 0.3104 REMARK 3 S21: 0.1660 S22: -0.0683 S23: 0.1904 REMARK 3 S31: -0.2170 S32: 0.2138 S33: 0.0367 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: ( CHAIN A AND RESID 238:275 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.1331 -12.3461 14.3805 REMARK 3 T TENSOR REMARK 3 T11: 0.1360 T22: 0.1175 REMARK 3 T33: 0.1172 T12: 0.0179 REMARK 3 T13: 0.0044 T23: 0.0053 REMARK 3 L TENSOR REMARK 3 L11: 1.2929 L22: 0.9239 REMARK 3 L33: 2.9153 L12: 0.5028 REMARK 3 L13: -0.2638 L23: -0.6772 REMARK 3 S TENSOR REMARK 3 S11: -0.0173 S12: -0.1365 S13: 0.0430 REMARK 3 S21: 0.0308 S22: 0.0257 S23: 0.1348 REMARK 3 S31: 0.2147 S32: -0.2035 S33: -0.0071 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4XFD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-JAN-15. REMARK 100 THE DEPOSITION ID IS D_1000205576. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-OCT-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97872 REMARK 200 MONOCHROMATOR : DIAMOND [111] REMARK 200 OPTICS : BERYLLIUM LENSES REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 39807 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.550 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : 0.06200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.0300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.55 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.59 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.53600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.760 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.21 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.24 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MORPHEUS (B4): 12.5% PEG-1000, 12.5% REMARK 280 PEG-3350, 12.5% MPD, 0.1M MES/IMIDAZOLE, PH 6.5, 0.03M EACH REMARK 280 SODIUM FLUORIDE, SODIUM BROMIDE, SODIUM IODIDE; REMARK 280 PSAEA.00025.A.B1.PW37555 AT 23.5 MG/ML, TRAY 258195B4, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 55.99000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 20.84500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 55.99000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 20.84500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: BIOLOGICAL UNIT IS A DIMERTETRAMER, SAME AS THE ASYMMETRIC REMARK 300 UNIT REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 313 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 385 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 431 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -7 REMARK 465 ALA A -6 REMARK 465 HIS A -5 REMARK 465 ILE A 216 REMARK 465 PRO A 217 REMARK 465 THR A 218 REMARK 465 ALA A 219 REMARK 465 ASP A 220 REMARK 465 LEU A 221 REMARK 465 GLU A 222 REMARK 465 ASP A 223 REMARK 465 LEU A 224 REMARK 465 ARG A 225 REMARK 465 PRO A 226 REMARK 465 GLY A 227 REMARK 465 HIS A 228 REMARK 465 PRO A 229 REMARK 465 ASP A 230 REMARK 465 GLU A 231 REMARK 465 ALA A 232 REMARK 465 SER A 233 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 HIS A -2 CG ND1 CD2 CE1 NE2 REMARK 470 MET A 1 CG SD CE REMARK 470 GLN A 74 CG CD OE1 NE2 REMARK 470 TYR A 89 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 VAL A 91 CG1 CG2 REMARK 470 GLN A 92 CG CD OE1 NE2 REMARK 470 LYS A 136 CG CD CE NZ REMARK 470 LYS A 215 CG CD CE NZ REMARK 470 HIS A 234 CG ND1 CD2 CE1 NE2 REMARK 470 LYS A 264 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH1 ARG A 200 O HOH A 585 2.11 REMARK 500 O HOH A 569 O HOH A 584 2.11 REMARK 500 OE1 GLN A 248 O HOH A 608 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 89 -153.54 -141.88 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 565 DISTANCE = 5.83 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: SSGCID-PSAEA.00025.A RELATED DB: TARGETTRACK DBREF 4XFD A 1 275 UNP Q9HUP3 NADE_PSEAE 1 275 SEQADV 4XFD MET A -7 UNP Q9HUP3 INITIATING METHIONINE SEQADV 4XFD ALA A -6 UNP Q9HUP3 EXPRESSION TAG SEQADV 4XFD HIS A -5 UNP Q9HUP3 EXPRESSION TAG SEQADV 4XFD HIS A -4 UNP Q9HUP3 EXPRESSION TAG SEQADV 4XFD HIS A -3 UNP Q9HUP3 EXPRESSION TAG SEQADV 4XFD HIS A -2 UNP Q9HUP3 EXPRESSION TAG SEQADV 4XFD HIS A -1 UNP Q9HUP3 EXPRESSION TAG SEQADV 4XFD HIS A 0 UNP Q9HUP3 EXPRESSION TAG SEQRES 1 A 283 MET ALA HIS HIS HIS HIS HIS HIS MET GLN GLN ILE GLN SEQRES 2 A 283 ARG ASP ILE ALA GLN ALA LEU GLN VAL GLN PRO PRO PHE SEQRES 3 A 283 GLN SER GLU ALA ASP VAL GLN ALA GLN ILE ALA ARG ARG SEQRES 4 A 283 ILE ALA PHE ILE GLN GLN CYS LEU LYS ASP SER GLY LEU SEQRES 5 A 283 LYS THR LEU VAL LEU GLY ILE SER GLY GLY VAL ASP SER SEQRES 6 A 283 LEU THR ALA GLY LEU LEU ALA GLN ARG ALA VAL GLU GLN SEQRES 7 A 283 LEU ARG GLU GLN THR GLY ASP GLN ALA TYR ARG PHE ILE SEQRES 8 A 283 ALA VAL ARG LEU PRO TYR GLN VAL GLN GLN ASP GLU ALA SEQRES 9 A 283 ASP ALA GLN ALA SER LEU ALA THR ILE ARG ALA ASP GLU SEQRES 10 A 283 GLU GLN THR VAL ASN ILE GLY PRO SER VAL LYS ALA LEU SEQRES 11 A 283 ALA GLU GLN LEU GLU ALA LEU GLU GLY LEU GLU PRO ALA SEQRES 12 A 283 LYS SER ASP PHE VAL ILE GLY ASN ILE LYS ALA ARG ILE SEQRES 13 A 283 ARG MET VAL ALA GLN TYR ALA ILE ALA GLY ALA ARG GLY SEQRES 14 A 283 GLY LEU VAL ILE GLY THR ASP HIS ALA ALA GLU ALA VAL SEQRES 15 A 283 MET GLY PHE PHE THR LYS PHE GLY ASP GLY ALA CYS ASP SEQRES 16 A 283 LEU ALA PRO LEU SER GLY LEU ALA LYS HIS GLN VAL ARG SEQRES 17 A 283 ALA LEU ALA ARG ALA LEU GLY ALA PRO GLU ASN LEU VAL SEQRES 18 A 283 GLU LYS ILE PRO THR ALA ASP LEU GLU ASP LEU ARG PRO SEQRES 19 A 283 GLY HIS PRO ASP GLU ALA SER HIS GLY VAL THR TYR ALA SEQRES 20 A 283 GLU ILE ASP ALA PHE LEU HIS GLY GLN PRO LEU ARG GLU SEQRES 21 A 283 GLU ALA ALA ARG VAL ILE VAL ASP THR TYR HIS LYS THR SEQRES 22 A 283 GLN HIS LYS ARG GLU LEU PRO LYS ALA PRO FORMUL 2 HOH *309(H2 O) HELIX 1 AA1 HIS A -4 LEU A 12 1 17 HELIX 2 AA2 SER A 20 GLY A 43 1 24 HELIX 3 AA3 GLY A 54 GLY A 76 1 23 HELIX 4 AA4 VAL A 91 ARG A 106 1 16 HELIX 5 AA5 ILE A 115 GLU A 124 1 10 HELIX 6 AA6 GLN A 125 GLU A 130 5 6 HELIX 7 AA7 GLU A 133 GLY A 161 1 29 HELIX 8 AA8 HIS A 169 GLY A 176 1 8 HELIX 9 AA9 ALA A 195 LEU A 206 1 12 HELIX 10 AB1 PRO A 209 GLU A 214 1 6 HELIX 11 AB2 THR A 237 GLY A 247 1 11 HELIX 12 AB3 ARG A 251 THR A 265 1 15 HELIX 13 AB4 GLN A 266 GLU A 270 5 5 SHEET 1 AA1 4 GLU A 109 THR A 112 0 SHEET 2 AA1 4 ARG A 81 ARG A 86 1 N ARG A 86 O GLN A 111 SHEET 3 AA1 4 THR A 46 GLY A 50 1 N LEU A 47 O ILE A 83 SHEET 4 AA1 4 GLY A 162 VAL A 164 1 O LEU A 163 N VAL A 48 CRYST1 111.980 41.690 64.470 90.00 113.40 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008930 0.000000 0.003864 0.00000 SCALE2 0.000000 0.023987 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016901 0.00000