HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 30-DEC-14 4XG0 TITLE CRYSTAL STRUCTURE OF A DOMAIN OF UNKNOWN FUNCTION (DUF1537) FROM TITLE 2 BORDETELLA BRONCHISEPTICA (BB3215), TARGET EFI-511620, WITH BOUND TITLE 3 CITRATE, DOMAIN SWAPPED DIMER, SPACE GROUP C2221 COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BORDETELLA BRONCHISEPTICA; SOURCE 3 ORGANISM_TAXID: 257310; SOURCE 4 STRAIN: ATCC BAA-588 / NCTC 13252 / RB50; SOURCE 5 GENE: BB3215; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET KEYWDS UNKNOWN FUNCTION, ENZYME FUNCTION INITIATIVE, EFI, STRUCTURAL KEYWDS 2 GENOMICS EXPDTA X-RAY DIFFRACTION AUTHOR M.W.VETTING,N.F.AL OBAIDI,R.TORO,L.L.MORISCO,J.BENACH,S.R.WASSERMAN, AUTHOR 2 J.D.ATTONITO,A.SCOTT GLENN,S.CHAMALA,S.CHOWDHURY,J.LAFLEUR,J.LOVE, AUTHOR 3 R.D.SEIDEL,K.L.WHALEN,J.A.GERLT,S.C.ALMO,ENZYME FUNCTION INITIATIVE AUTHOR 4 (EFI) REVDAT 6 27-SEP-23 4XG0 1 REMARK REVDAT 5 22-NOV-17 4XG0 1 JRNL REMARK REVDAT 4 10-AUG-16 4XG0 1 JRNL REVDAT 3 27-JUL-16 4XG0 1 JRNL REVDAT 2 13-JUL-16 4XG0 1 JRNL REVDAT 1 11-MAR-15 4XG0 0 JRNL AUTH X.ZHANG,M.S.CARTER,M.W.VETTING,B.SAN FRANCISCO,S.ZHAO, JRNL AUTH 2 N.F.AL-OBAIDI,J.O.SOLBIATI,J.J.THIAVILLE,V.DE CRECY-LAGARD, JRNL AUTH 3 M.P.JACOBSON,S.C.ALMO,J.A.GERLT JRNL TITL ASSIGNMENT OF FUNCTION TO A DOMAIN OF UNKNOWN FUNCTION: JRNL TITL 2 DUF1537 IS A NEW KINASE FAMILY IN CATABOLIC PATHWAYS FOR JRNL TITL 3 ACID SUGARS. JRNL REF PROC.NATL.ACAD.SCI.USA V. 113 E4161 2016 JRNL REFN ESSN 1091-6490 JRNL PMID 27402745 JRNL DOI 10.1073/PNAS.1605546113 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.68 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 43184 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.201 REMARK 3 R VALUE (WORKING SET) : 0.199 REMARK 3 FREE R VALUE : 0.237 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.030 REMARK 3 FREE R VALUE TEST SET COUNT : 2172 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 30.6883 - 4.2801 0.97 2637 136 0.1914 0.2172 REMARK 3 2 4.2801 - 3.3987 1.00 2623 147 0.1721 0.2057 REMARK 3 3 3.3987 - 2.9695 1.00 2590 141 0.2076 0.2531 REMARK 3 4 2.9695 - 2.6982 1.00 2596 127 0.2081 0.2441 REMARK 3 5 2.6982 - 2.5049 1.00 2583 135 0.1967 0.2383 REMARK 3 6 2.5049 - 2.3572 1.00 2570 130 0.1833 0.2363 REMARK 3 7 2.3572 - 2.2392 1.00 2533 142 0.1943 0.2195 REMARK 3 8 2.2392 - 2.1418 1.00 2576 132 0.2008 0.2350 REMARK 3 9 2.1418 - 2.0593 1.00 2555 135 0.2009 0.2368 REMARK 3 10 2.0593 - 1.9883 1.00 2548 131 0.2088 0.2944 REMARK 3 11 1.9883 - 1.9261 1.00 2542 140 0.2197 0.2486 REMARK 3 12 1.9261 - 1.8711 1.00 2533 122 0.2594 0.3290 REMARK 3 13 1.8711 - 1.8218 1.00 2519 161 0.2279 0.2982 REMARK 3 14 1.8218 - 1.7774 1.00 2544 146 0.2321 0.2500 REMARK 3 15 1.7774 - 1.7370 1.00 2555 125 0.2401 0.2780 REMARK 3 16 1.7370 - 1.7000 1.00 2508 122 0.2586 0.2932 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.200 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.370 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 25.75 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 34.26 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 2878 REMARK 3 ANGLE : 1.305 3945 REMARK 3 CHIRALITY : 0.077 474 REMARK 3 PLANARITY : 0.008 526 REMARK 3 DIHEDRAL : 15.349 996 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 2 THROUGH 62 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.4256 -4.7873 -16.2684 REMARK 3 T TENSOR REMARK 3 T11: 0.3916 T22: 0.3978 REMARK 3 T33: 0.2628 T12: -0.1526 REMARK 3 T13: 0.1026 T23: -0.1264 REMARK 3 L TENSOR REMARK 3 L11: 0.6830 L22: 1.4326 REMARK 3 L33: 2.3668 L12: -0.4162 REMARK 3 L13: -0.7772 L23: 0.7325 REMARK 3 S TENSOR REMARK 3 S11: -0.4091 S12: 0.5803 S13: -0.5512 REMARK 3 S21: -0.0879 S22: 0.0746 S23: 0.2392 REMARK 3 S31: 0.7855 S32: -0.7566 S33: 0.2496 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 63 THROUGH 232 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.9866 4.1613 -24.4354 REMARK 3 T TENSOR REMARK 3 T11: 0.2780 T22: 0.2451 REMARK 3 T33: 0.1173 T12: -0.0524 REMARK 3 T13: 0.0798 T23: -0.0256 REMARK 3 L TENSOR REMARK 3 L11: 3.5537 L22: 1.8201 REMARK 3 L33: 3.2660 L12: 0.5581 REMARK 3 L13: -1.9667 L23: -0.0663 REMARK 3 S TENSOR REMARK 3 S11: -0.2164 S12: 0.6644 S13: 0.1390 REMARK 3 S21: -0.3763 S22: 0.2047 S23: -0.2380 REMARK 3 S31: 0.0596 S32: -0.3550 S33: -0.0756 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 233 THROUGH 404 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.0424 23.8741 6.6142 REMARK 3 T TENSOR REMARK 3 T11: 0.1418 T22: 0.1714 REMARK 3 T33: 0.2797 T12: 0.0072 REMARK 3 T13: -0.0101 T23: -0.0692 REMARK 3 L TENSOR REMARK 3 L11: 2.1639 L22: 1.7988 REMARK 3 L33: 1.4732 L12: 0.0049 REMARK 3 L13: -0.1375 L23: 0.6553 REMARK 3 S TENSOR REMARK 3 S11: -0.0077 S12: -0.1283 S13: 0.4008 REMARK 3 S21: 0.0505 S22: -0.0150 S23: -0.1441 REMARK 3 S31: -0.0457 S32: 0.0332 S33: 0.0298 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4XG0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-DEC-14. REMARK 100 THE DEPOSITION ID IS D_1000205607. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-JUL-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 31-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX225HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.1.27 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 43285 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 32.090 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 7.400 REMARK 200 R MERGE (I) : 0.09800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.73 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.30 REMARK 200 R MERGE FOR SHELL (I) : 0.90400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4XFR REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.11 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.24 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN (39.6 MG/ML, 10 MM HEPES PH REMARK 280 7.5, 5 MM DTT,); RESERVOIR (MCSG2(H6); 0.8 M AMMONIUM SULFATE, REMARK 280 0.1 M TRI-SODIUM CITRATE, PH 4); CRYOPROTECTION (80% 1.8 M LISO4, REMARK 280 20% RESERVOIR, PH 5.0, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 66.57850 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 66.57850 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 31.53200 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 46.45150 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 31.53200 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 46.45150 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 66.57850 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 31.53200 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 46.45150 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 66.57850 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 31.53200 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 46.45150 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: BIOLOGICAL UNIT IS UNDETERMINED, COULD BE MONOMER OR DIMER REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4800 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 29680 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -81.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -21 REMARK 465 HIS A -20 REMARK 465 HIS A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 SER A -14 REMARK 465 SER A -13 REMARK 465 GLY A -12 REMARK 465 VAL A -11 REMARK 465 ASP A -10 REMARK 465 LEU A -9 REMARK 465 GLY A -8 REMARK 465 THR A -7 REMARK 465 GLU A -6 REMARK 465 ASN A -5 REMARK 465 LEU A -4 REMARK 465 TYR A -3 REMARK 465 PHE A -2 REMARK 465 GLN A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 GLU A 284 REMARK 465 ALA A 285 REMARK 465 ALA A 286 REMARK 465 GLU A 287 REMARK 465 HIS A 288 REMARK 465 GLY A 289 REMARK 465 MET A 290 REMARK 465 PRO A 291 REMARK 465 ALA A 292 REMARK 465 VAL A 293 REMARK 465 LYS A 405 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 47 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 48 CG CD OE1 NE2 REMARK 470 ARG A 315 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 821 O HOH A 822 2.07 REMARK 500 OD2 ASP A 339 O HOH A 797 2.08 REMARK 500 O HOH A 602 O HOH A 661 2.12 REMARK 500 O HOH A 704 O HOH A 817 2.16 REMARK 500 OE1 GLN A 22 O HOH A 824 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 630 O HOH A 640 4555 1.95 REMARK 500 O HOH A 613 O HOH A 657 3654 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 44 1.60 -68.72 REMARK 500 HIS A 57 47.24 37.72 REMARK 500 SER A 217 -151.94 -97.76 REMARK 500 ASP A 309 146.71 -25.30 REMARK 500 VAL A 356 -50.41 -120.38 REMARK 500 ASP A 357 -149.33 -173.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CIT A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 505 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EFI-511620 RELATED DB: TARGETTRACK DBREF 4XG0 A 1 405 UNP Q7WHJ2 Q7WHJ2_BORBR 1 405 SEQADV 4XG0 MET A -21 UNP Q7WHJ2 INITIATING METHIONINE SEQADV 4XG0 HIS A -20 UNP Q7WHJ2 EXPRESSION TAG SEQADV 4XG0 HIS A -19 UNP Q7WHJ2 EXPRESSION TAG SEQADV 4XG0 HIS A -18 UNP Q7WHJ2 EXPRESSION TAG SEQADV 4XG0 HIS A -17 UNP Q7WHJ2 EXPRESSION TAG SEQADV 4XG0 HIS A -16 UNP Q7WHJ2 EXPRESSION TAG SEQADV 4XG0 HIS A -15 UNP Q7WHJ2 EXPRESSION TAG SEQADV 4XG0 SER A -14 UNP Q7WHJ2 EXPRESSION TAG SEQADV 4XG0 SER A -13 UNP Q7WHJ2 EXPRESSION TAG SEQADV 4XG0 GLY A -12 UNP Q7WHJ2 EXPRESSION TAG SEQADV 4XG0 VAL A -11 UNP Q7WHJ2 EXPRESSION TAG SEQADV 4XG0 ASP A -10 UNP Q7WHJ2 EXPRESSION TAG SEQADV 4XG0 LEU A -9 UNP Q7WHJ2 EXPRESSION TAG SEQADV 4XG0 GLY A -8 UNP Q7WHJ2 EXPRESSION TAG SEQADV 4XG0 THR A -7 UNP Q7WHJ2 EXPRESSION TAG SEQADV 4XG0 GLU A -6 UNP Q7WHJ2 EXPRESSION TAG SEQADV 4XG0 ASN A -5 UNP Q7WHJ2 EXPRESSION TAG SEQADV 4XG0 LEU A -4 UNP Q7WHJ2 EXPRESSION TAG SEQADV 4XG0 TYR A -3 UNP Q7WHJ2 EXPRESSION TAG SEQADV 4XG0 PHE A -2 UNP Q7WHJ2 EXPRESSION TAG SEQADV 4XG0 GLN A -1 UNP Q7WHJ2 EXPRESSION TAG SEQADV 4XG0 SER A 0 UNP Q7WHJ2 EXPRESSION TAG SEQRES 1 A 427 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 A 427 GLY THR GLU ASN LEU TYR PHE GLN SER MET GLY GLY PRO SEQRES 3 A 427 TYR ILE GLY ILE VAL ALA ASP ASP LEU THR GLY SER GLY SEQRES 4 A 427 ASP THR ALA VAL GLN PHE VAL ARG ALA GLY TRP ALA THR SEQRES 5 A 427 GLN LEU SER VAL GLY GLY ALA GLU GLN ALA LEU ALA ASP SEQRES 6 A 427 PRO ALA VAL ARG GLN ALA GLU VAL LEU ALA VAL THR THR SEQRES 7 A 427 HIS SER ARG PRO LEU ALA ALA ALA ASP ALA ALA ALA VAL SEQRES 8 A 427 VAL ARG GLY GLU VAL GLU ARG LEU ARG ALA ALA GLY VAL SEQRES 9 A 427 GLN ARG LEU TYR LYS LYS VAL ASP SER THR LEU ARG GLY SEQRES 10 A 427 ALA PHE LYS ALA GLU ILE ASP ALA ALA ARG LEU ALA TRP SEQRES 11 A 427 GLY GLU ASP ALA ILE ALA VAL VAL CYS PRO ALA PHE PRO SEQRES 12 A 427 VAL THR GLY ARG THR VAL ARG GLN GLY VAL LEU TYR VAL SEQRES 13 A 427 GLY ASP ARG PRO VAL THR GLU THR SER ALA ALA THR ASP SEQRES 14 A 427 PRO VAL THR PRO VAL THR GLU SER HIS ILE PRO THR LEU SEQRES 15 A 427 LEU GLY CYS ALA GLN LEU ALA ALA GLN ALA GLY GLU THR SEQRES 16 A 427 PRO ALA GLU LEU ALA ARG ARG ILE ALA ALA ALA ALA PRO SEQRES 17 A 427 VAL VAL VAL VAL ASP ALA LEU ASP ASP ALA ASP VAL GLN SEQRES 18 A 427 ARG LEU ALA ARG ALA ILE GLY VAL LEU GLY GLN ARG ALA SEQRES 19 A 427 VAL PRO VAL GLY SER GLY GLY LEU ALA ALA PRO LEU ALA SEQRES 20 A 427 ARG VAL TRP ALA GLY GLY GLN ALA ALA GLY PRO VAL LEU SEQRES 21 A 427 VAL VAL VAL THR SER GLN HIS SER ALA ALA ARG GLN GLN SEQRES 22 A 427 ALA ALA ALA LEU GLN GLN ALA GLY ALA ARG THR TRP ALA SEQRES 23 A 427 PRO THR LEU ALA GLN LEU ALA ASP ASP ARG ASN TRP ALA SEQRES 24 A 427 ALA TRP THR ALA GLU VAL GLU ALA ALA GLU HIS GLY MET SEQRES 25 A 427 PRO ALA VAL ASP ALA LEU MET LEU LEU ALA PRO GLU GLY SEQRES 26 A 427 ARG LEU ALA GLY LEU ASP ALA ASP SER VAL ALA ARG ARG SEQRES 27 A 427 LEU GLY GLU LEU ALA ALA ARG LEU VAL LEU ALA HIS GLY SEQRES 28 A 427 ALA ALA GLY VAL VAL ALA THR GLY GLY ASP GLY ALA SER SEQRES 29 A 427 ALA VAL LEU ALA ALA LEU GLN ALA SER GLY ILE ALA LEU SEQRES 30 A 427 VAL ASP GLU VAL THR GLY GLY VAL PRO LEU GLY THR LEU SEQRES 31 A 427 THR GLY GLY GLN ALA ALA GLY LEU PRO VAL VAL THR LYS SEQRES 32 A 427 ALA GLY GLY PHE GLY GLU GLN ASP VAL LEU ILE ARG ALA SEQRES 33 A 427 ALA GLN ALA ILE ARG GLU ARG ARG PHE THR LYS HET CIT A 501 18 HET CL A 502 1 HET SO4 A 503 5 HET SO4 A 504 5 HET SO4 A 505 5 HETNAM CIT CITRIC ACID HETNAM CL CHLORIDE ION HETNAM SO4 SULFATE ION FORMUL 2 CIT C6 H8 O7 FORMUL 3 CL CL 1- FORMUL 4 SO4 3(O4 S 2-) FORMUL 7 HOH *266(H2 O) HELIX 1 AA1 ASP A 12 ALA A 26 1 15 HELIX 2 AA2 GLY A 36 ASP A 43 1 8 HELIX 3 AA3 PRO A 44 ARG A 47 5 4 HELIX 4 AA4 ALA A 62 ALA A 80 1 19 HELIX 5 AA5 ALA A 96 GLY A 109 1 14 HELIX 6 AA6 PHE A 120 THR A 123 5 4 HELIX 7 AA7 THR A 140 ASP A 147 5 8 HELIX 8 AA8 HIS A 156 GLY A 162 1 7 HELIX 9 AA9 THR A 173 ALA A 184 1 12 HELIX 10 AB1 ASP A 194 GLY A 209 1 16 HELIX 11 AB2 SER A 217 GLY A 231 1 15 HELIX 12 AB3 HIS A 245 ALA A 258 1 14 HELIX 13 AB4 THR A 266 ALA A 271 1 6 HELIX 14 AB5 ASP A 272 VAL A 283 1 12 HELIX 15 AB6 ASP A 311 HIS A 328 1 18 HELIX 16 AB7 GLY A 337 LEU A 348 1 12 HELIX 17 AB8 ASP A 389 GLU A 400 1 12 SHEET 1 AA1 8 THR A 30 LEU A 32 0 SHEET 2 AA1 8 VAL A 51 THR A 55 1 O VAL A 51 N GLN A 31 SHEET 3 AA1 8 ILE A 6 ALA A 10 1 N ILE A 8 O LEU A 52 SHEET 4 AA1 8 ARG A 84 LYS A 88 1 O ARG A 84 N GLY A 7 SHEET 5 AA1 8 ALA A 212 GLY A 216 1 O PRO A 214 N LYS A 87 SHEET 6 AA1 8 ILE A 113 CYS A 117 1 N ILE A 113 O VAL A 213 SHEET 7 AA1 8 VAL A 187 VAL A 190 1 O VAL A 188 N VAL A 116 SHEET 8 AA1 8 ALA A 164 LEU A 166 1 N ALA A 164 O VAL A 189 SHEET 1 AA2 3 ARG A 125 ARG A 128 0 SHEET 2 AA2 3 VAL A 131 VAL A 134 -1 O TYR A 133 N THR A 126 SHEET 3 AA2 3 ARG A 137 PRO A 138 -1 O ARG A 137 N VAL A 134 SHEET 1 AA3 7 ARG A 261 TRP A 263 0 SHEET 2 AA3 7 ALA A 295 LEU A 299 1 O MET A 297 N TRP A 263 SHEET 3 AA3 7 VAL A 237 VAL A 241 1 N VAL A 239 O LEU A 296 SHEET 4 AA3 7 GLY A 332 THR A 336 1 O VAL A 334 N VAL A 240 SHEET 5 AA3 7 PRO A 377 LYS A 381 1 O VAL A 379 N ALA A 335 SHEET 6 AA3 7 VAL A 363 THR A 369 -1 N GLY A 366 O VAL A 378 SHEET 7 AA3 7 GLY A 352 THR A 360 -1 N ALA A 354 O THR A 367 CISPEP 1 ALA A 185 PRO A 186 0 5.80 CISPEP 2 THR A 336 GLY A 337 0 -7.22 SITE 1 AC1 11 ASP A 12 THR A 14 ARG A 59 LYS A 88 SITE 2 AC1 11 ASP A 90 SER A 91 ARG A 94 HOH A 641 SITE 3 AC1 11 HOH A 716 HOH A 723 HOH A 737 SITE 1 AC2 5 GLN A 22 ARG A 226 HOH A 751 HOH A 824 SITE 2 AC2 5 HOH A 850 SITE 1 AC3 2 THR A 360 ARG A 393 SITE 1 AC4 3 HIS A 245 SER A 246 HOH A 756 CRYST1 63.064 92.903 133.157 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015857 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010764 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007510 0.00000