HEADER CELL ADHESION 06-JAN-15 4XHQ TITLE RE-REFINEMENT THE CRYSTAL STRUCTURE OF DSCAM1 ISOFORM 1.34, N-TERMINAL TITLE 2 FOUR IG DOMAINS COMPND MOL_ID: 1; COMPND 2 MOLECULE: DSCAM; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 36-423; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DROSOPHILA MELANOGASTER; SOURCE 3 ORGANISM_COMMON: FRUIT FLY; SOURCE 4 ORGANISM_TAXID: 7227; SOURCE 5 GENE: DSCAM1, DSCAM, CG17800; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS KEYWDS IG FOLD, CELL ADHESION EXPDTA X-RAY DIFFRACTION AUTHOR Q.CHEN,Y.YU REVDAT 3 09-OCT-24 4XHQ 1 HETSYN LINK REVDAT 2 29-JUL-20 4XHQ 1 COMPND REMARK HETNAM LINK REVDAT 2 2 1 SITE ATOM REVDAT 1 12-OCT-16 4XHQ 0 JRNL AUTH S.A.LI,L.CHENG,Y.YU,Q.CHEN JRNL TITL STRUCTURAL BASIS OF DSCAM1 HOMODIMERIZATION: INSIGHTS INTO JRNL TITL 2 CONTEXT CONSTRAINT FOR PROTEIN RECOGNITION JRNL REF SCI ADV V. 2 01118 2016 JRNL REFN ESSN 2375-2548 JRNL PMID 27386517 JRNL DOI 10.1126/SCIADV.1501118 REMARK 0 REMARK 0 THIS ENTRY 4XHQ REFLECTS AN ALTERNATIVE MODELING OF THE REMARK 0 STRUCTURAL DATA IN R2V5MSF ORIGINAL DATA DETERMINED BY AUTHOR: REMARK 0 R.MEIJERS,R.PUETTMANN-HOLGADO,G.SKINIOTIS,J.-H.LIU,T.WALZ, REMARK 0 D.SCHMUCKER,J.-H.WANG REMARK 0 ORIGINAL DATA REFERENCE 1 REMARK 0 PDB ID: 2V5M REMARK 0 AUTH R.MEIJERS,R.PUETTMANN-HOLGADO,G.SKINIOTIS,J.-H.LIU,T.WALZ, REMARK 0 AUTH 2 J.-H.WANG,D.SCHMUCKER REMARK 0 TITL STRUCTURAL BASIS OF DSCAM ISOFORM SPECIFICITY REMARK 0 REF NATURE V. 449 487 2007 REMARK 0 REFN ISSN 0028-0836 REMARK 0 PMID 17721508 REMARK 0 DOI 10.1038/NATURE06147 REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.4_1496) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.83 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 3 NUMBER OF REFLECTIONS : 59545 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.205 REMARK 3 R VALUE (WORKING SET) : 0.203 REMARK 3 FREE R VALUE : 0.233 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.040 REMARK 3 FREE R VALUE TEST SET COUNT : 3003 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 19.8354 - 5.3414 1.00 2994 150 0.1905 0.2207 REMARK 3 2 5.3414 - 4.2533 1.00 2795 170 0.1482 0.1664 REMARK 3 3 4.2533 - 3.7197 1.00 2770 156 0.1623 0.1973 REMARK 3 4 3.7197 - 3.3814 1.00 2764 148 0.1827 0.2076 REMARK 3 5 3.3814 - 3.1401 1.00 2713 159 0.2020 0.2318 REMARK 3 6 3.1401 - 2.9556 1.00 2739 125 0.2120 0.2549 REMARK 3 7 2.9556 - 2.8080 0.99 2700 160 0.2222 0.2393 REMARK 3 8 2.8080 - 2.6861 0.99 2716 141 0.2318 0.2714 REMARK 3 9 2.6861 - 2.5829 0.99 2724 131 0.2446 0.2975 REMARK 3 10 2.5829 - 2.4939 0.99 2675 151 0.2446 0.2906 REMARK 3 11 2.4939 - 2.4161 0.99 2685 132 0.2503 0.2711 REMARK 3 12 2.4161 - 2.3472 0.99 2702 130 0.2474 0.2900 REMARK 3 13 2.3472 - 2.2855 0.99 2674 139 0.2395 0.3190 REMARK 3 14 2.2855 - 2.2298 0.99 2663 157 0.2514 0.2752 REMARK 3 15 2.2298 - 2.1791 0.99 2638 158 0.2458 0.2838 REMARK 3 16 2.1791 - 2.1328 0.99 2676 127 0.2491 0.3002 REMARK 3 17 2.1328 - 2.0902 0.99 2644 136 0.2520 0.2656 REMARK 3 18 2.0902 - 2.0508 0.98 2672 135 0.2640 0.2946 REMARK 3 19 2.0508 - 2.0142 0.98 2576 163 0.2730 0.3183 REMARK 3 20 2.0142 - 1.9801 0.96 2577 124 0.2852 0.3325 REMARK 3 21 1.9801 - 1.9482 0.91 2445 111 0.3053 0.3668 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.250 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.500 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.018 3218 REMARK 3 ANGLE : 1.660 4359 REMARK 3 CHIRALITY : 0.094 508 REMARK 3 PLANARITY : 0.008 551 REMARK 3 DIHEDRAL : 13.787 1210 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4XHQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 09-JAN-15. REMARK 100 THE DEPOSITION ID IS D_1000205349. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : NULL REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: AUTHOR USED THE SF DATA FROM ENTRY 2V5M. REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 73.84 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.70 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.5 M AMMONIUM SULPHATE, 0.1 M HEPES REMARK 280 PH 7.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 42 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z+1/2 REMARK 290 4555 Y,-X,Z+1/2 REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z REMARK 290 7555 Y,X,-Z+1/2 REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 81.99550 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 81.99550 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 81.99550 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 81.99550 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 11870 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 37300 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -137.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 198.34400 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 S SO4 A 420 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 882 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH2 ARG A 13 O HOH A 501 2.02 REMARK 500 O HOH A 719 O HOH A 841 2.09 REMARK 500 O HOH A 682 O HOH A 813 2.14 REMARK 500 O HOH A 847 O HOH A 859 2.14 REMARK 500 O ARG A 356 O HOH A 502 2.15 REMARK 500 O HOH A 744 O HOH A 813 2.16 REMARK 500 O HOH A 686 O HOH A 865 2.17 REMARK 500 O HOH A 742 O HOH A 810 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 776 O HOH A 776 2765 2.06 REMARK 500 O HOH A 684 O HOH A 684 6565 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 193 NE - CZ - NH2 ANGL. DEV. = -3.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 157 -43.00 -139.76 REMARK 500 ALA A 227 -9.42 74.97 REMARK 500 ASN A 262 -150.70 -151.20 REMARK 500 SER A 269 -113.39 57.62 REMARK 500 PHE A 321 150.72 -49.41 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 418 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 VAL A 259 O REMARK 620 2 HOH A 526 O 134.7 REMARK 620 3 HOH A 607 O 54.5 162.7 REMARK 620 4 HOH A 657 O 110.5 80.1 111.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 416 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 378 O REMARK 620 2 HOH A 554 O 101.8 REMARK 620 N 1 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2V5M RELATED DB: PDB REMARK 900 THIS ENTRY 4XHQ REFLECTS AN ALTERNATIVE MODELING OF THE STRUCTURAL REMARK 900 DATA IN R2V5MSF. DBREF 4XHQ A 1 388 UNP Q9NBA1 Q9NBA1_DROME 36 423 SEQADV 4XHQ ILE A 207 UNP Q9NBA1 VAL 242 VARIANT SEQADV 4XHQ ALA A 211 UNP Q9NBA1 PRO 246 VARIANT SEQADV 4XHQ ARG A 213 UNP Q9NBA1 LYS 248 VARIANT SEQADV 4XHQ THR A 214 UNP Q9NBA1 ILE 249 VARIANT SEQADV 4XHQ PRO A 215 UNP Q9NBA1 ASN 250 VARIANT SEQADV 4XHQ ALA A 216 UNP Q9NBA1 THR 251 VARIANT SEQADV 4XHQ VAL A 218 UNP Q9NBA1 THR 253 VARIANT SEQADV 4XHQ GLN A 219 UNP Q9NBA1 TYR 254 VARIANT SEQADV 4XHQ LEU A 222 UNP Q9NBA1 ASN 257 VARIANT SEQADV 4XHQ GLU A 223 UNP Q9NBA1 ILE 258 VARIANT SEQADV 4XHQ LEU A 224 UNP Q9NBA1 VAL 259 VARIANT SEQADV 4XHQ MET A 225 UNP Q9NBA1 GLU 260 VARIANT SEQADV 4XHQ VAL A 226 UNP Q9NBA1 SER 261 VARIANT SEQADV 4XHQ ALA A 227 UNP Q9NBA1 MET 262 VARIANT SEQADV 4XHQ HIS A 228 UNP Q9NBA1 ALA 263 VARIANT SEQADV 4XHQ THR A 229 UNP Q9NBA1 SER 264 VARIANT SEQADV 4XHQ ILE A 230 UNP Q9NBA1 THR 265 VARIANT SEQADV 4XHQ SER A 231 UNP Q9NBA1 ALA 266 VARIANT SEQADV 4XHQ LEU A 232 UNP Q9NBA1 ILE 267 VARIANT SEQADV 4XHQ PHE A 239 UNP Q9NBA1 TYR 274 VARIANT SEQRES 1 A 388 GLN LYS GLY PRO VAL PHE LEU LYS GLU PRO THR ASN ARG SEQRES 2 A 388 ILE ASP PHE SER ASN SER THR GLY ALA GLU ILE GLU CYS SEQRES 3 A 388 LYS ALA SER GLY ASN PRO MET PRO GLU ILE ILE TRP ILE SEQRES 4 A 388 ARG SER ASP GLY THR ALA VAL GLY ASP VAL PRO GLY LEU SEQRES 5 A 388 ARG GLN ILE SER SER ASP GLY LYS LEU VAL PHE PRO PRO SEQRES 6 A 388 PHE ARG ALA GLU ASP TYR ARG GLN GLU VAL HIS ALA GLN SEQRES 7 A 388 VAL TYR ALA CYS LEU ALA ARG ASN GLN PHE GLY SER ILE SEQRES 8 A 388 ILE SER ARG ASP VAL HIS VAL ARG ALA VAL VAL ALA GLN SEQRES 9 A 388 TYR TYR GLU ALA ASP VAL ASN LYS GLU HIS VAL ILE ARG SEQRES 10 A 388 GLY ASN SER ALA VAL ILE LYS CYS LEU ILE PRO SER PHE SEQRES 11 A 388 VAL ALA ASP PHE VAL GLU VAL VAL SER TRP HIS THR ASP SEQRES 12 A 388 GLU GLU GLU ASN TYR PHE PRO GLY ALA GLU TYR ASP GLY SEQRES 13 A 388 LYS TYR LEU VAL LEU PRO SER GLY GLU LEU HIS ILE ARG SEQRES 14 A 388 GLU VAL GLY PRO GLU ASP GLY TYR LYS SER TYR GLN CYS SEQRES 15 A 388 ARG THR LYS HIS ARG LEU THR GLY GLU THR ARG LEU SER SEQRES 16 A 388 ALA THR LYS GLY ARG LEU VAL ILE THR GLU PRO ILE SER SEQRES 17 A 388 SER SER ALA PRO ARG THR PRO ALA LEU VAL GLN LYS PRO SEQRES 18 A 388 LEU GLU LEU MET VAL ALA HIS THR ILE SER LEU LEU CYS SEQRES 19 A 388 PRO ALA GLN GLY PHE PRO ALA PRO SER PHE ARG TRP TYR SEQRES 20 A 388 LYS PHE ILE GLU GLY THR THR ARG LYS GLN ALA VAL VAL SEQRES 21 A 388 LEU ASN ASP ARG VAL LYS GLN VAL SER GLY THR LEU ILE SEQRES 22 A 388 ILE LYS ASP ALA VAL VAL GLU ASP SER GLY LYS TYR LEU SEQRES 23 A 388 CYS VAL VAL ASN ASN SER VAL GLY GLY GLU SER VAL GLU SEQRES 24 A 388 THR VAL LEU THR VAL THR ALA PRO LEU SER ALA LYS ILE SEQRES 25 A 388 ASP PRO PRO THR GLN THR VAL ASP PHE GLY ARG PRO ALA SEQRES 26 A 388 VAL PHE THR CYS GLN TYR THR GLY ASN PRO ILE LYS THR SEQRES 27 A 388 VAL SER TRP MET LYS ASP GLY LYS ALA ILE GLY HIS SER SEQRES 28 A 388 GLU SER VAL LEU ARG ILE GLU SER VAL LYS LYS GLU ASP SEQRES 29 A 388 LYS GLY MET TYR GLN CYS PHE VAL ARG ASN ASP ARG GLU SEQRES 30 A 388 SER ALA GLU ALA SER ALA GLU LEU LYS LEU GLY HET NAG B 1 14 HET NAG B 2 14 HET BMA B 3 11 HET NAG C 1 14 HET NAG C 2 14 HET BMA C 3 11 HET MAN C 4 11 HET MAN C 5 11 HET GOL A 409 6 HET GOL A 410 6 HET CL A 411 1 HET CL A 412 1 HET GOL A 413 6 HET CL A 414 1 HET NA A 415 1 HET NA A 416 1 HET NA A 417 1 HET NA A 418 1 HET SO4 A 419 5 HET SO4 A 420 5 HET CL A 421 1 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM GOL GLYCEROL HETNAM CL CHLORIDE ION HETNAM NA SODIUM ION HETNAM SO4 SULFATE ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 NAG 4(C8 H15 N O6) FORMUL 2 BMA 2(C6 H12 O6) FORMUL 3 MAN 2(C6 H12 O6) FORMUL 4 GOL 3(C3 H8 O3) FORMUL 6 CL 4(CL 1-) FORMUL 10 NA 4(NA 1+) FORMUL 14 SO4 2(O4 S 2-) FORMUL 17 HOH *383(H2 O) HELIX 1 AA1 ARG A 67 TYR A 71 5 5 HELIX 2 AA2 ARG A 72 HIS A 76 1 5 HELIX 3 AA3 GLY A 172 LYS A 178 5 7 HELIX 4 AA4 VAL A 278 SER A 282 5 5 HELIX 5 AA5 LYS A 361 LYS A 365 5 5 SHEET 1 AA1 2 LYS A 2 LYS A 8 0 SHEET 2 AA1 2 LYS A 27 ASN A 31 -1 O LYS A 27 N LEU A 7 SHEET 1 AA2 4 ARG A 13 SER A 17 0 SHEET 2 AA2 4 VAL A 96 VAL A 101 1 O VAL A 101 N PHE A 16 SHEET 3 AA2 4 ALA A 77 ASN A 86 -1 N GLN A 78 O VAL A 98 SHEET 4 AA2 4 GLU A 35 ARG A 40 -1 N ILE A 37 O LEU A 83 SHEET 1 AA3 4 ARG A 13 SER A 17 0 SHEET 2 AA3 4 VAL A 96 VAL A 101 1 O VAL A 101 N PHE A 16 SHEET 3 AA3 4 ALA A 77 ASN A 86 -1 N GLN A 78 O VAL A 98 SHEET 4 AA3 4 GLY A 89 ILE A 92 -1 O ILE A 91 N ALA A 84 SHEET 1 AA4 3 ALA A 22 GLU A 25 0 SHEET 2 AA4 3 LYS A 60 PHE A 63 -1 O PHE A 63 N ALA A 22 SHEET 3 AA4 3 GLN A 54 ILE A 55 -1 N GLN A 54 O VAL A 62 SHEET 1 AA5 2 GLU A 113 ILE A 116 0 SHEET 2 AA5 2 LEU A 201 THR A 204 1 O THR A 204 N VAL A 115 SHEET 1 AA6 3 ALA A 121 ILE A 123 0 SHEET 2 AA6 3 LEU A 166 ILE A 168 -1 O ILE A 168 N ALA A 121 SHEET 3 AA6 3 TYR A 158 VAL A 160 -1 N LEU A 159 O HIS A 167 SHEET 1 AA7 4 ASN A 147 TYR A 148 0 SHEET 2 AA7 4 VAL A 135 THR A 142 -1 N TRP A 140 O TYR A 148 SHEET 3 AA7 4 TYR A 180 HIS A 186 -1 O ARG A 183 N VAL A 138 SHEET 4 AA7 4 THR A 192 LEU A 194 -1 O ARG A 193 N THR A 184 SHEET 1 AA8 2 SER A 210 ARG A 213 0 SHEET 2 AA8 2 GLN A 237 PHE A 239 -1 O PHE A 239 N SER A 210 SHEET 1 AA9 5 LEU A 222 MET A 225 0 SHEET 2 AA9 5 GLY A 295 ASP A 313 1 O VAL A 301 N LEU A 222 SHEET 3 AA9 5 GLY A 283 ASN A 290 -1 N GLY A 283 O LEU A 302 SHEET 4 AA9 5 SER A 243 PHE A 249 -1 N TYR A 247 O LEU A 286 SHEET 5 AA9 5 LYS A 256 ALA A 258 -1 O GLN A 257 N LYS A 248 SHEET 1 AB1 4 LEU A 222 MET A 225 0 SHEET 2 AB1 4 GLY A 295 ASP A 313 1 O VAL A 301 N LEU A 222 SHEET 3 AB1 4 ALA A 325 ASN A 334 -1 O GLN A 330 N LYS A 311 SHEET 4 AB1 4 VAL A 354 ILE A 357 -1 O ILE A 357 N ALA A 325 SHEET 1 AB2 3 ILE A 230 LEU A 232 0 SHEET 2 AB2 3 THR A 271 ILE A 274 -1 O ILE A 274 N ILE A 230 SHEET 3 AB2 3 VAL A 265 VAL A 268 -1 N VAL A 268 O THR A 271 SHEET 1 AB3 5 THR A 316 ASP A 320 0 SHEET 2 AB3 5 SER A 378 GLY A 388 1 O LYS A 386 N GLN A 317 SHEET 3 AB3 5 GLY A 366 ARG A 373 -1 N TYR A 368 O ALA A 383 SHEET 4 AB3 5 THR A 338 LYS A 343 -1 N MET A 342 O GLN A 369 SHEET 5 AB3 5 LYS A 346 ALA A 347 -1 O LYS A 346 N LYS A 343 SSBOND 1 CYS A 26 CYS A 82 1555 1555 2.08 SSBOND 2 CYS A 125 CYS A 182 1555 1555 2.15 SSBOND 3 CYS A 234 CYS A 287 1555 1555 2.23 SSBOND 4 CYS A 329 CYS A 370 1555 1555 2.11 LINK ND2 ASN A 18 C1 NAG B 1 1555 1555 1.46 LINK ND2 ASN A 290 C1 NAG C 1 1555 1555 1.45 LINK O4 NAG B 1 C1 NAG B 2 1555 1555 1.45 LINK O4 NAG B 2 C1 BMA B 3 1555 1555 1.46 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.42 LINK O4 NAG C 2 C1 BMA C 3 1555 1555 1.44 LINK O3 BMA C 3 C1 MAN C 4 1555 1555 1.45 LINK O6 BMA C 3 C1 MAN C 5 1555 1555 1.46 LINK O VAL A 259 NA NA A 418 1555 1555 2.81 LINK O PRO A 314 NA NA A 415 1555 1555 2.77 LINK O SER A 378 NA NA A 416 1555 1555 2.83 LINK OE2 GLU A 384 NA NA A 417 1555 1555 2.86 LINK NA NA A 416 O HOH A 554 1555 1555 2.65 LINK NA NA A 418 O HOH A 526 1555 1555 2.52 LINK NA NA A 418 O HOH A 607 1555 1555 3.17 LINK NA NA A 418 O HOH A 657 1555 1555 2.44 CISPEP 1 ASN A 31 PRO A 32 0 3.77 CISPEP 2 PHE A 239 PRO A 240 0 0.68 CISPEP 3 ASP A 313 PRO A 314 0 -2.35 CISPEP 4 ASN A 334 PRO A 335 0 -8.33 CRYST1 99.172 99.172 163.991 90.00 90.00 90.00 P 42 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010083 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010083 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006098 0.00000