data_4XIC # _entry.id 4XIC # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4XIC pdb_00004xic 10.2210/pdb4xic/pdb WWPDB D_1000205496 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.details . _pdbx_database_related.db_id 4XID _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 4XIC _pdbx_database_status.recvd_initial_deposition_date 2015-01-06 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'White, M.A.' 1 'Zandarashvili, L.' 2 'Iwahara, J.' 3 # loop_ _citation.abstract _citation.abstract_id_CAS _citation.book_id_ISBN _citation.book_publisher _citation.book_publisher_city _citation.book_title _citation.coordinate_linkage _citation.country _citation.database_id_Medline _citation.details _citation.id _citation.journal_abbrev _citation.journal_id_ASTM _citation.journal_id_CSD _citation.journal_id_ISSN _citation.journal_full _citation.journal_issue _citation.journal_volume _citation.language _citation.page_first _citation.page_last _citation.title _citation.year _citation.database_id_CSD _citation.pdbx_database_id_DOI _citation.pdbx_database_id_PubMed _citation.unpublished_flag ? ? ? ? ? ? ? US ? ? primary Biophys.J. BIOJAU 0030 1542-0086 ? ? 109 ? 1026 1037 'Entropic Enhancement of Protein-DNA Affinity by Oxygen-to-Sulfur Substitution in DNA Phosphate.' 2015 ? 10.1016/j.bpj.2015.07.032 26331260 ? ? ? ? ? ? ? ? US ? ? 1 'Genes Dev.' GEDEEP 2056 1549-5477 ? ? 28 ? 2304 2313 'Wilms tumor protein recognizes 5-carboxylcytosine within a specific DNA sequence.' 2014 ? 10.1101/gad.250746.114 25258363 ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Zandarashvili, L.' 1 ? primary 'Nguyen, D.' 2 ? primary 'Anderson, K.M.' 3 ? primary 'White, M.A.' 4 ? primary 'Gorenstein, D.G.' 5 ? primary 'Iwahara, J.' 6 ? 1 'Hashimoto, H.' 7 ? 1 'Olanrewaju, Y.O.' 8 ? 1 'Zheng, Y.' 9 ? 1 'Wilson, G.G.' 10 ? 1 'Zhang, X.' 11 ? 1 'Cheng, X.' 12 ? # _cell.entry_id 4XIC _cell.length_a 96.539 _cell.length_b 96.539 _cell.length_c 89.546 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4XIC _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Homeotic protein antennapedia' 7961.297 2 ? ? 'UNP residues 297-356' ? 2 polymer syn ;DNA (5'-D(*AP*GP*AP*AP*AP*GP*CP*(C2S)P*AP*TP*TP*AP*GP*AP*G)-3') ; 4683.193 2 ? ? ? ? 3 polymer syn ;DNA (5'-D(*TP*CP*TP*CP*TP*AP*AP*TP*GP*GP*CP*TP*TP*TP*C)-3') ; 4525.944 2 ? ? ? ? 4 non-polymer syn 'NICKEL (II) ION' 58.693 3 ? ? ? ? 5 non-polymer syn '(4S)-2-METHYL-2,4-PENTANEDIOL' 118.174 3 ? ? ? ? 6 water nat water 18.015 14 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no MRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALSLTERQIKIWFQNRRMKWKKEN MRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALSLTERQIKIWFQNRRMKWKKEN A,D ? 2 polydeoxyribonucleotide no yes '(DA)(DG)(DA)(DA)(DA)(DG)(DC)(C2S)(DA)(DT)(DT)(DA)(DG)(DA)(DG)' AGAAAGCCATTAGAG B,E ? 3 polydeoxyribonucleotide no no '(DT)(DC)(DT)(DC)(DT)(DA)(DA)(DT)(DG)(DG)(DC)(DT)(DT)(DT)(DC)' TCTCTAATGGCTTTC C,F ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ARG n 1 3 LYS n 1 4 ARG n 1 5 GLY n 1 6 ARG n 1 7 GLN n 1 8 THR n 1 9 TYR n 1 10 THR n 1 11 ARG n 1 12 TYR n 1 13 GLN n 1 14 THR n 1 15 LEU n 1 16 GLU n 1 17 LEU n 1 18 GLU n 1 19 LYS n 1 20 GLU n 1 21 PHE n 1 22 HIS n 1 23 PHE n 1 24 ASN n 1 25 ARG n 1 26 TYR n 1 27 LEU n 1 28 THR n 1 29 ARG n 1 30 ARG n 1 31 ARG n 1 32 ARG n 1 33 ILE n 1 34 GLU n 1 35 ILE n 1 36 ALA n 1 37 HIS n 1 38 ALA n 1 39 LEU n 1 40 SER n 1 41 LEU n 1 42 THR n 1 43 GLU n 1 44 ARG n 1 45 GLN n 1 46 ILE n 1 47 LYS n 1 48 ILE n 1 49 TRP n 1 50 PHE n 1 51 GLN n 1 52 ASN n 1 53 ARG n 1 54 ARG n 1 55 MET n 1 56 LYS n 1 57 TRP n 1 58 LYS n 1 59 LYS n 1 60 GLU n 1 61 ASN n 2 1 DA n 2 2 DG n 2 3 DA n 2 4 DA n 2 5 DA n 2 6 DG n 2 7 DC n 2 8 C2S n 2 9 DA n 2 10 DT n 2 11 DT n 2 12 DA n 2 13 DG n 2 14 DA n 2 15 DG n 3 1 DT n 3 2 DC n 3 3 DT n 3 4 DC n 3 5 DT n 3 6 DA n 3 7 DA n 3 8 DT n 3 9 DG n 3 10 DG n 3 11 DC n 3 12 DT n 3 13 DT n 3 14 DT n 3 15 DC n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 61 _entity_src_gen.gene_src_common_name 'Fruit fly' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'Antp, CG1028' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Drosophila melanogaster' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 7227 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample 1 15 unidentified ? 32644 ? 3 1 sample 1 15 unidentified ? 32644 ? # loop_ _struct_ref.db_code _struct_ref.db_name _struct_ref.details _struct_ref.entity_id _struct_ref.id _struct_ref.seq_align _struct_ref.seq_dif _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_align_end ANTP_DROME UNP ? 1 1 ? ? P02833 ? RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 297 ? 4XIC PDB ? 2 2 ? ? 4XIC ? ? 1 ? 4XIC PDB ? 3 3 ? ? 4XIC ? ? 1 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4XIC A 2 ? 61 ? P02833 297 ? 356 ? 1 60 2 2 4XIC B 1 ? 15 ? 4XIC 0 ? 14 ? 0 14 3 3 4XIC C 1 ? 15 ? 4XIC 23 ? 37 ? 23 37 4 1 4XIC D 2 ? 61 ? P02833 297 ? 356 ? 1 60 5 2 4XIC E 1 ? 15 ? 4XIC 0 ? 14 ? 0 14 6 3 4XIC F 1 ? 15 ? 4XIC 23 ? 37 ? 23 37 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4XIC MET A 1 ? UNP P02833 ? ? 'initiating methionine' 0 1 1 4XIC SER A 40 ? UNP P02833 CYS 335 'engineered mutation' 39 2 4 4XIC MET D 1 ? UNP P02833 ? ? 'initiating methionine' 0 3 4 4XIC SER D 40 ? UNP P02833 CYS 335 'engineered mutation' 39 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 C2S 'DNA linking' n "CYTIDINE-5'-DITHIOPHOSPHORATE" ? 'C9 H14 N3 O5 P S2' 339.328 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MPD non-polymer . '(4S)-2-METHYL-2,4-PENTANEDIOL' ? 'C6 H14 O2' 118.174 NI non-polymer . 'NICKEL (II) ION' ? 'Ni 2' 58.693 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 4XIC _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 3.05 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 59.70 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 300 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '20 mM BTP, 10 mM NiCl, 5% MPD' _exptl_crystal_grow.pdbx_pH_range 7.0 # _diffrn.ambient_environment ? _diffrn.ambient_temp 90 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2014-08-02 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator Si _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97921 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97921 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 19-ID _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate 46.640 _reflns.entry_id 4XIC _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.69 _reflns.d_resolution_low 40.000 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 18508 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.800 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 8.900 _reflns.pdbx_Rmerge_I_obs 0.127 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI 16.154 _reflns.pdbx_netI_over_sigmaI 10.500 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared 1.000 _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.134 _reflns.pdbx_Rpim_I_all 0.043 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all 109936 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_R_split 2.700 2.750 ? ? ? ? ? 602 ? 100.000 ? ? ? ? ? ? ? ? ? ? ? ? ? 5.800 ? 0.935 ? ? ? ? 0 1 1 0.374 ? 2.750 2.800 ? ? ? ? ? 593 ? 100.000 ? ? ? ? ? ? ? ? ? ? ? ? ? 5.900 ? 0.938 ? ? ? 0.921 0 2 1 0.414 ? 2.800 2.850 ? ? ? ? ? 604 ? 100.000 ? ? ? ? ? ? ? ? ? ? ? ? ? 5.800 ? 0.928 ? ? ? 0.745 0 3 1 0.591 ? 2.850 2.910 ? ? ? ? ? 595 ? 100.000 ? ? ? ? ? ? ? ? ? ? ? ? ? 5.900 ? 0.933 ? ? ? 0.678 0 4 1 0.610 ? 2.910 2.970 ? ? ? ? ? 605 ? 100.000 ? ? ? ? ? ? ? ? ? ? ? ? ? 5.900 ? 0.936 ? ? ? 0.572 0 5 1 0.638 ? 2.970 3.040 ? ? ? ? ? 603 ? 99.800 ? ? ? ? 0.779 ? ? ? ? ? ? ? ? 6.100 ? 0.864 ? ? 0.851 0.337 0 6 1 0.887 ? 3.040 3.120 ? ? ? ? ? 604 ? 100.000 ? ? ? ? 0.613 ? ? ? ? ? ? ? ? 6.300 ? 0.859 ? ? 0.664 0.254 0 7 1 0.958 ? 3.120 3.200 ? ? ? ? ? 596 ? 100.000 ? ? ? ? 0.308 ? ? ? ? ? ? ? ? 6.800 ? 0.808 ? ? 0.332 0.123 0 8 1 0.996 ? 3.200 3.300 ? ? ? ? ? 603 ? 98.900 ? ? ? ? 0.220 ? ? ? ? ? ? ? ? 7.200 ? 0.865 ? ? 0.237 0.086 0 9 1 0.996 ? 3.300 3.400 ? ? ? ? ? 607 ? 99.700 ? ? ? ? 0.189 ? ? ? ? ? ? ? ? 7.700 ? 0.860 ? ? 0.203 0.072 0 10 1 0.996 ? 3.400 3.520 ? ? ? ? ? 602 ? 100.000 ? ? ? ? 0.247 ? ? ? ? ? ? ? ? 8.300 ? 0.865 ? ? 0.263 0.088 0 11 1 0.996 ? 3.520 3.660 ? ? ? ? ? 618 ? 100.000 ? ? ? ? 0.279 ? ? ? ? ? ? ? ? 9.100 ? 0.879 ? ? 0.295 0.096 0 12 1 0.991 ? 3.660 3.830 ? ? ? ? ? 604 ? 100.000 ? ? ? ? 0.222 ? ? ? ? ? ? ? ? 9.900 ? 0.937 ? ? 0.235 0.074 0 13 1 0.990 ? 3.830 4.030 ? ? ? ? ? 626 ? 100.000 ? ? ? ? 0.221 ? ? ? ? ? ? ? ? 11.500 ? 1.070 ? ? 0.231 0.068 0 14 1 0.989 ? 4.030 4.280 ? ? ? ? ? 614 ? 100.000 ? ? ? ? 0.217 ? ? ? ? ? ? ? ? 13.100 ? 1.147 ? ? 0.226 0.061 0 15 1 0.990 ? 4.280 4.620 ? ? ? ? ? 622 ? 100.000 ? ? ? ? 0.170 ? ? ? ? ? ? ? ? 13.300 ? 1.154 ? ? 0.177 0.048 0 16 1 0.994 ? 4.620 5.080 ? ? ? ? ? 632 ? 100.000 ? ? ? ? 0.146 ? ? ? ? ? ? ? ? 13.200 ? 1.145 ? ? 0.152 0.042 0 17 1 0.991 ? 5.080 5.810 ? ? ? ? ? 628 ? 100.000 ? ? ? ? 0.124 ? ? ? ? ? ? ? ? 12.900 ? 1.124 ? ? 0.129 0.035 0 18 1 0.994 ? 5.810 7.310 ? ? ? ? ? 648 ? 100.000 ? ? ? ? 0.111 ? ? ? ? ? ? ? ? 12.400 ? 1.050 ? ? 0.116 0.033 0 19 1 0.994 ? 7.310 40.000 ? ? ? ? ? 703 ? 98.600 ? ? ? ? 0.088 ? ? ? ? ? ? ? ? 10.300 ? 0.990 ? ? 0.094 0.032 0 20 1 0.994 ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4XIC _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 18507 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 37.439 _refine.ls_d_res_high 2.690 _refine.ls_percent_reflns_obs 82.43 _refine.ls_R_factor_obs 0.2189 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2160 _refine.ls_R_factor_R_free 0.2717 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.34 _refine.ls_number_reflns_R_free 988 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'PDB entry 4XID' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details Random _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.33 _refine.pdbx_overall_phase_error 31.22 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1040 _refine_hist.pdbx_number_atoms_nucleic_acid 1218 _refine_hist.pdbx_number_atoms_ligand 27 _refine_hist.number_atoms_solvent 14 _refine_hist.number_atoms_total 2299 _refine_hist.d_res_high 2.690 _refine_hist.d_res_low 37.439 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.006 ? ? 2486 'X-RAY DIFFRACTION' ? f_angle_d 0.823 ? ? 3606 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 28.647 ? ? 1032 'X-RAY DIFFRACTION' ? f_chiral_restr 0.043 ? ? 385 'X-RAY DIFFRACTION' ? f_plane_restr 0.041 ? ? 274 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.number_reflns_obs 'X-RAY DIFFRACTION' . 2.6902 2.8319 919 0.3612 30.00 0.3988 . . 48 . . . . 'X-RAY DIFFRACTION' . 2.8319 3.0093 1883 0.3664 62.00 0.3695 . . 104 . . . . 'X-RAY DIFFRACTION' . 3.0093 3.2415 2695 0.2771 89.00 0.3535 . . 155 . . . . 'X-RAY DIFFRACTION' . 3.2415 3.5675 2967 0.2250 97.00 0.3009 . . 160 . . . . 'X-RAY DIFFRACTION' . 3.5675 4.0832 3017 0.1986 100.00 0.2878 . . 178 . . . . 'X-RAY DIFFRACTION' . 4.0832 5.1423 3025 0.1917 100.00 0.2422 . . 171 . . . . 'X-RAY DIFFRACTION' . 5.1423 37.4422 3013 0.1825 99.00 0.2165 . . 172 . . . . # _struct.entry_id 4XIC _struct.title 'ANTPHD WITH 15BP di-thioate modified DNA DUPLEX' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 4XIC _struct_keywords.text 'DNA Binding, Methylated DNA, ZINC FINGER, TRANSCRIPTION, Transcription Regulator-DNA complex' _struct_keywords.pdbx_keywords 'Transcription Regulator/DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 1 ? E N N 2 ? F N N 3 ? G N N 4 ? H N N 5 ? I N N 5 ? J N N 4 ? K N N 4 ? L N N 5 ? M N N 6 ? N N N 6 ? O N N 6 ? P N N 6 ? Q N N 6 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 THR A 10 ? ASN A 24 ? THR A 9 ASN A 23 1 ? 15 HELX_P HELX_P2 AA2 THR A 28 ? SER A 40 ? THR A 27 SER A 39 1 ? 13 HELX_P HELX_P3 AA3 THR A 42 ? ASN A 61 ? THR A 41 ASN A 60 1 ? 20 HELX_P HELX_P4 AA4 THR D 10 ? ASN D 24 ? THR D 9 ASN D 23 1 ? 15 HELX_P HELX_P5 AA5 THR D 28 ? SER D 40 ? THR D 27 SER D 39 1 ? 13 HELX_P HELX_P6 AA6 THR D 42 ? ASN D 61 ? THR D 41 ASN D 60 1 ? 20 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? B DC 7 "O3'" ? ? ? 1_555 B C2S 8 P ? ? B DC 6 B C2S 7 1_555 ? ? ? ? ? ? ? 1.589 ? ? covale2 covale both ? B C2S 8 "O3'" ? ? ? 1_555 B DA 9 P ? ? B C2S 7 B DA 8 1_555 ? ? ? ? ? ? ? 1.606 ? ? covale3 covale both ? E DC 7 "O3'" ? ? ? 1_555 E C2S 8 P ? ? E DC 6 E C2S 7 1_555 ? ? ? ? ? ? ? 1.603 ? ? covale4 covale both ? E C2S 8 "O3'" ? ? ? 1_555 E DA 9 P ? ? E C2S 7 E DA 8 1_555 ? ? ? ? ? ? ? 1.603 ? ? metalc1 metalc ? ? B DG 2 N7 ? ? ? 1_555 G NI . NI ? ? B DG 1 B NI 101 1_555 ? ? ? ? ? ? ? 2.391 ? ? metalc2 metalc ? ? G NI . NI ? ? ? 1_555 N HOH . O ? ? B NI 101 C HOH 202 1_555 ? ? ? ? ? ? ? 2.501 ? ? metalc3 metalc ? ? D HIS 22 NE2 ? ? ? 1_555 J NI . NI ? ? D HIS 21 D NI 102 1_555 ? ? ? ? ? ? ? 2.232 ? ? hydrog1 hydrog ? ? B DG 2 N1 ? ? ? 1_555 C DC 15 N3 ? ? B DG 1 C DC 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B DG 2 N2 ? ? ? 1_555 C DC 15 O2 ? ? B DG 1 C DC 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B DG 2 O6 ? ? ? 1_555 C DC 15 N4 ? ? B DG 1 C DC 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B DA 3 N1 ? ? ? 1_555 C DT 14 N3 ? ? B DA 2 C DT 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B DA 3 N6 ? ? ? 1_555 C DT 14 O4 ? ? B DA 2 C DT 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B DA 4 N1 ? ? ? 1_555 C DT 13 N3 ? ? B DA 3 C DT 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B DA 4 N6 ? ? ? 1_555 C DT 13 O4 ? ? B DA 3 C DT 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B DA 5 N1 ? ? ? 1_555 C DT 12 N3 ? ? B DA 4 C DT 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B DA 5 N6 ? ? ? 1_555 C DT 12 O4 ? ? B DA 4 C DT 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B DG 6 N1 ? ? ? 1_555 C DC 11 N3 ? ? B DG 5 C DC 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B DG 6 N2 ? ? ? 1_555 C DC 11 O2 ? ? B DG 5 C DC 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B DG 6 O6 ? ? ? 1_555 C DC 11 N4 ? ? B DG 5 C DC 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B DC 7 N3 ? ? ? 1_555 C DG 10 N1 ? ? B DC 6 C DG 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B DC 7 N4 ? ? ? 1_555 C DG 10 O6 ? ? B DC 6 C DG 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B DC 7 O2 ? ? ? 1_555 C DG 10 N2 ? ? B DC 6 C DG 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? B C2S 8 N3 ? ? ? 1_555 C DG 9 N1 ? ? B C2S 7 C DG 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B C2S 8 N4 ? ? ? 1_555 C DG 9 O6 ? ? B C2S 7 C DG 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B C2S 8 O2 ? ? ? 1_555 C DG 9 N2 ? ? B C2S 7 C DG 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B DA 9 N1 ? ? ? 1_555 C DT 8 N3 ? ? B DA 8 C DT 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? B DA 9 N6 ? ? ? 1_555 C DT 8 O4 ? ? B DA 8 C DT 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? B DT 10 N3 ? ? ? 1_555 C DA 7 N1 ? ? B DT 9 C DA 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? B DT 10 O4 ? ? ? 1_555 C DA 7 N6 ? ? B DT 9 C DA 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? B DT 11 N3 ? ? ? 1_555 C DA 6 N1 ? ? B DT 10 C DA 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? B DT 11 O4 ? ? ? 1_555 C DA 6 N6 ? ? B DT 10 C DA 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? B DA 12 N1 ? ? ? 1_555 C DT 5 N3 ? ? B DA 11 C DT 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? B DA 12 N6 ? ? ? 1_555 C DT 5 O4 ? ? B DA 11 C DT 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? B DG 13 N1 ? ? ? 1_555 C DC 4 N3 ? ? B DG 12 C DC 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? B DG 13 N2 ? ? ? 1_555 C DC 4 O2 ? ? B DG 12 C DC 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? B DG 13 O6 ? ? ? 1_555 C DC 4 N4 ? ? B DG 12 C DC 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? B DA 14 N1 ? ? ? 1_555 C DT 3 N3 ? ? B DA 13 C DT 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? B DA 14 N6 ? ? ? 1_555 C DT 3 O4 ? ? B DA 13 C DT 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? B DG 15 N1 ? ? ? 1_555 C DC 2 N3 ? ? B DG 14 C DC 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? B DG 15 N2 ? ? ? 1_555 C DC 2 O2 ? ? B DG 14 C DC 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? B DG 15 O6 ? ? ? 1_555 C DC 2 N4 ? ? B DG 14 C DC 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? E DG 2 N1 ? ? ? 1_555 F DC 15 N3 ? ? E DG 1 F DC 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? E DG 2 N2 ? ? ? 1_555 F DC 15 O2 ? ? E DG 1 F DC 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? E DG 2 O6 ? ? ? 1_555 F DC 15 N4 ? ? E DG 1 F DC 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? E DA 3 N1 ? ? ? 1_555 F DT 14 N3 ? ? E DA 2 F DT 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? E DA 3 N6 ? ? ? 1_555 F DT 14 O4 ? ? E DA 2 F DT 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? E DA 4 N1 ? ? ? 1_555 F DT 13 N3 ? ? E DA 3 F DT 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? E DA 4 N6 ? ? ? 1_555 F DT 13 O4 ? ? E DA 3 F DT 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? E DA 5 N1 ? ? ? 1_555 F DT 12 N3 ? ? E DA 4 F DT 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? E DA 5 N6 ? ? ? 1_555 F DT 12 O4 ? ? E DA 4 F DT 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? E DG 6 N1 ? ? ? 1_555 F DC 11 N3 ? ? E DG 5 F DC 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? E DG 6 N2 ? ? ? 1_555 F DC 11 O2 ? ? E DG 5 F DC 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? E DG 6 O6 ? ? ? 1_555 F DC 11 N4 ? ? E DG 5 F DC 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? E DC 7 N3 ? ? ? 1_555 F DG 10 N1 ? ? E DC 6 F DG 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? E DC 7 N4 ? ? ? 1_555 F DG 10 O6 ? ? E DC 6 F DG 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? E DC 7 O2 ? ? ? 1_555 F DG 10 N2 ? ? E DC 6 F DG 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? E C2S 8 N3 ? ? ? 1_555 F DG 9 N1 ? ? E C2S 7 F DG 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? E C2S 8 N4 ? ? ? 1_555 F DG 9 O6 ? ? E C2S 7 F DG 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? E C2S 8 O2 ? ? ? 1_555 F DG 9 N2 ? ? E C2S 7 F DG 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? E DA 9 N1 ? ? ? 1_555 F DT 8 N3 ? ? E DA 8 F DT 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? E DA 9 N6 ? ? ? 1_555 F DT 8 O4 ? ? E DA 8 F DT 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? E DT 10 N3 ? ? ? 1_555 F DA 7 N1 ? ? E DT 9 F DA 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? E DT 10 O4 ? ? ? 1_555 F DA 7 N6 ? ? E DT 9 F DA 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? E DT 11 N3 ? ? ? 1_555 F DA 6 N1 ? ? E DT 10 F DA 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? E DT 11 O4 ? ? ? 1_555 F DA 6 N6 ? ? E DT 10 F DA 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? E DA 12 N1 ? ? ? 1_555 F DT 5 N3 ? ? E DA 11 F DT 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? E DA 12 N6 ? ? ? 1_555 F DT 5 O4 ? ? E DA 11 F DT 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? E DG 13 N1 ? ? ? 1_555 F DC 4 N3 ? ? E DG 12 F DC 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? E DG 13 N2 ? ? ? 1_555 F DC 4 O2 ? ? E DG 12 F DC 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? E DG 13 O6 ? ? ? 1_555 F DC 4 N4 ? ? E DG 12 F DC 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? E DA 14 N1 ? ? ? 1_555 F DT 3 N3 ? ? E DA 13 F DT 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? E DA 14 N6 ? ? ? 1_555 F DT 3 O4 ? ? E DA 13 F DT 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? E DG 15 N1 ? ? ? 1_555 F DC 2 N3 ? ? E DG 14 F DC 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? E DG 15 N2 ? ? ? 1_555 F DC 2 O2 ? ? E DG 14 F DC 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? E DG 15 O6 ? ? ? 1_555 F DC 2 N4 ? ? E DG 14 F DC 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software B NI 101 ? 2 'binding site for residue NI B 101' AC2 Software C MPD 101 ? 2 'binding site for residue MPD C 101' AC3 Software D MPD 101 ? 1 'binding site for residue MPD D 101' AC4 Software D NI 102 ? 2 'binding site for residue NI D 102' AC5 Software E NI 101 ? 1 'binding site for residue NI E 101' AC6 Software F MPD 101 ? 2 'binding site for residue MPD F 101' AC7 Software E DC 6 ? 8 'binding site for Di-nucleotide DC E 6 and C2S E 7' AC8 Software E C2S 7 ? 7 'binding site for Di-nucleotide C2S E 7 and DA E 8' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 2 DG B 2 ? DG B 1 . ? 1_555 ? 2 AC1 2 HOH N . ? HOH C 202 . ? 1_555 ? 3 AC2 2 TYR A 26 ? TYR A 25 . ? 1_555 ? 4 AC2 2 DC C 15 ? DC C 37 . ? 1_555 ? 5 AC3 1 MPD L . ? MPD F 101 . ? 1_555 ? 6 AC4 2 HIS A 22 ? HIS A 21 . ? 7_556 ? 7 AC4 2 HIS D 22 ? HIS D 21 . ? 1_555 ? 8 AC5 1 DG E 2 ? DG E 1 . ? 1_555 ? 9 AC6 2 MPD I . ? MPD D 101 . ? 1_555 ? 10 AC6 2 DC F 15 ? DC F 37 . ? 1_555 ? 11 AC7 8 TYR D 26 ? TYR D 25 . ? 1_555 ? 12 AC7 8 GLN D 51 ? GLN D 50 . ? 1_555 ? 13 AC7 8 ARG D 54 ? ARG D 53 . ? 1_555 ? 14 AC7 8 MET D 55 ? MET D 54 . ? 1_555 ? 15 AC7 8 DG E 6 ? DG E 5 . ? 1_555 ? 16 AC7 8 DA E 9 ? DA E 8 . ? 1_555 ? 17 AC7 8 DG F 9 ? DG F 31 . ? 1_555 ? 18 AC7 8 DG F 10 ? DG F 32 . ? 1_555 ? 19 AC8 7 MET D 55 ? MET D 54 . ? 1_555 ? 20 AC8 7 DC E 7 ? DC E 6 . ? 1_555 ? 21 AC8 7 DT E 10 ? DT E 9 . ? 1_555 ? 22 AC8 7 DA F 7 ? DA F 29 . ? 1_555 ? 23 AC8 7 DT F 8 ? DT F 30 . ? 1_555 ? 24 AC8 7 DG F 9 ? DG F 31 . ? 1_555 ? 25 AC8 7 DG F 10 ? DG F 32 . ? 1_555 ? # _atom_sites.entry_id 4XIC _atom_sites.fract_transf_matrix[1][1] 0.010359 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010359 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011167 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N NI O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 0 ? ? ? A . n A 1 2 ARG 2 1 ? ? ? A . n A 1 3 LYS 3 2 2 LYS LYS A . n A 1 4 ARG 4 3 3 ARG ARG A . n A 1 5 GLY 5 4 4 GLY GLY A . n A 1 6 ARG 6 5 5 ARG ARG A . n A 1 7 GLN 7 6 6 GLN GLN A . n A 1 8 THR 8 7 7 THR THR A . n A 1 9 TYR 9 8 8 TYR TYR A . n A 1 10 THR 10 9 9 THR THR A . n A 1 11 ARG 11 10 10 ARG ARG A . n A 1 12 TYR 12 11 11 TYR TYR A . n A 1 13 GLN 13 12 12 GLN GLN A . n A 1 14 THR 14 13 13 THR THR A . n A 1 15 LEU 15 14 14 LEU LEU A . n A 1 16 GLU 16 15 15 GLU GLU A . n A 1 17 LEU 17 16 16 LEU LEU A . n A 1 18 GLU 18 17 17 GLU GLU A . n A 1 19 LYS 19 18 18 LYS LYS A . n A 1 20 GLU 20 19 19 GLU GLU A . n A 1 21 PHE 21 20 20 PHE PHE A . n A 1 22 HIS 22 21 21 HIS HIS A . n A 1 23 PHE 23 22 22 PHE PHE A . n A 1 24 ASN 24 23 23 ASN ASN A . n A 1 25 ARG 25 24 24 ARG ARG A . n A 1 26 TYR 26 25 25 TYR TYR A . n A 1 27 LEU 27 26 26 LEU LEU A . n A 1 28 THR 28 27 27 THR THR A . n A 1 29 ARG 29 28 28 ARG ARG A . n A 1 30 ARG 30 29 29 ARG ARG A . n A 1 31 ARG 31 30 30 ARG ARG A . n A 1 32 ARG 32 31 31 ARG ARG A . n A 1 33 ILE 33 32 32 ILE ILE A . n A 1 34 GLU 34 33 33 GLU GLU A . n A 1 35 ILE 35 34 34 ILE ILE A . n A 1 36 ALA 36 35 35 ALA ALA A . n A 1 37 HIS 37 36 36 HIS HIS A . n A 1 38 ALA 38 37 37 ALA ALA A . n A 1 39 LEU 39 38 38 LEU LEU A . n A 1 40 SER 40 39 39 SER SER A . n A 1 41 LEU 41 40 40 LEU LEU A . n A 1 42 THR 42 41 41 THR THR A . n A 1 43 GLU 43 42 42 GLU GLU A . n A 1 44 ARG 44 43 43 ARG ARG A . n A 1 45 GLN 45 44 44 GLN GLN A . n A 1 46 ILE 46 45 45 ILE ILE A . n A 1 47 LYS 47 46 46 LYS LYS A . n A 1 48 ILE 48 47 47 ILE ILE A . n A 1 49 TRP 49 48 48 TRP TRP A . n A 1 50 PHE 50 49 49 PHE PHE A . n A 1 51 GLN 51 50 50 GLN GLN A . n A 1 52 ASN 52 51 51 ASN ASN A . n A 1 53 ARG 53 52 52 ARG ARG A . n A 1 54 ARG 54 53 53 ARG ARG A . n A 1 55 MET 55 54 54 MET MET A . n A 1 56 LYS 56 55 55 LYS LYS A . n A 1 57 TRP 57 56 56 TRP TRP A . n A 1 58 LYS 58 57 57 LYS LYS A . n A 1 59 LYS 59 58 58 LYS LYS A . n A 1 60 GLU 60 59 59 GLU GLU A . n A 1 61 ASN 61 60 60 ASN ASN A . n B 2 1 DA 1 0 0 DA DA B . n B 2 2 DG 2 1 1 DG DG B . n B 2 3 DA 3 2 2 DA DA B . n B 2 4 DA 4 3 3 DA DA B . n B 2 5 DA 5 4 4 DA DA B . n B 2 6 DG 6 5 5 DG DG B . n B 2 7 DC 7 6 6 DC DC B . n B 2 8 C2S 8 7 7 C2S C2S B . n B 2 9 DA 9 8 8 DA DA B . n B 2 10 DT 10 9 9 DT DT B . n B 2 11 DT 11 10 10 DT DT B . n B 2 12 DA 12 11 11 DA DA B . n B 2 13 DG 13 12 12 DG DG B . n B 2 14 DA 14 13 13 DA DA B . n B 2 15 DG 15 14 14 DG DG B . n C 3 1 DT 1 23 23 DT DT C . n C 3 2 DC 2 24 24 DC DC C . n C 3 3 DT 3 25 25 DT DT C . n C 3 4 DC 4 26 26 DC DC C . n C 3 5 DT 5 27 27 DT DT C . n C 3 6 DA 6 28 28 DA DA C . n C 3 7 DA 7 29 29 DA DA C . n C 3 8 DT 8 30 30 DT DT C . n C 3 9 DG 9 31 31 DG DG C . n C 3 10 DG 10 32 32 DG DG C . n C 3 11 DC 11 33 33 DC DC C . n C 3 12 DT 12 34 34 DT DT C . n C 3 13 DT 13 35 35 DT DT C . n C 3 14 DT 14 36 36 DT DT C . n C 3 15 DC 15 37 37 DC DC C . n D 1 1 MET 1 0 ? ? ? D . n D 1 2 ARG 2 1 ? ? ? D . n D 1 3 LYS 3 2 ? ? ? D . n D 1 4 ARG 4 3 ? ? ? D . n D 1 5 GLY 5 4 ? ? ? D . n D 1 6 ARG 6 5 5 ARG ARG D . n D 1 7 GLN 7 6 6 GLN GLN D . n D 1 8 THR 8 7 7 THR THR D . n D 1 9 TYR 9 8 8 TYR TYR D . n D 1 10 THR 10 9 9 THR THR D . n D 1 11 ARG 11 10 10 ARG ARG D . n D 1 12 TYR 12 11 11 TYR TYR D . n D 1 13 GLN 13 12 12 GLN GLN D . n D 1 14 THR 14 13 13 THR THR D . n D 1 15 LEU 15 14 14 LEU LEU D . n D 1 16 GLU 16 15 15 GLU GLU D . n D 1 17 LEU 17 16 16 LEU LEU D . n D 1 18 GLU 18 17 17 GLU GLU D . n D 1 19 LYS 19 18 18 LYS LYS D . n D 1 20 GLU 20 19 19 GLU GLU D . n D 1 21 PHE 21 20 20 PHE PHE D . n D 1 22 HIS 22 21 21 HIS HIS D . n D 1 23 PHE 23 22 22 PHE PHE D . n D 1 24 ASN 24 23 23 ASN ASN D . n D 1 25 ARG 25 24 24 ARG ARG D . n D 1 26 TYR 26 25 25 TYR TYR D . n D 1 27 LEU 27 26 26 LEU LEU D . n D 1 28 THR 28 27 27 THR THR D . n D 1 29 ARG 29 28 28 ARG ARG D . n D 1 30 ARG 30 29 29 ARG ARG D . n D 1 31 ARG 31 30 30 ARG ARG D . n D 1 32 ARG 32 31 31 ARG ARG D . n D 1 33 ILE 33 32 32 ILE ILE D . n D 1 34 GLU 34 33 33 GLU GLU D . n D 1 35 ILE 35 34 34 ILE ILE D . n D 1 36 ALA 36 35 35 ALA ALA D . n D 1 37 HIS 37 36 36 HIS HIS D . n D 1 38 ALA 38 37 37 ALA ALA D . n D 1 39 LEU 39 38 38 LEU LEU D . n D 1 40 SER 40 39 39 SER SER D . n D 1 41 LEU 41 40 40 LEU LEU D . n D 1 42 THR 42 41 41 THR THR D . n D 1 43 GLU 43 42 42 GLU GLU D . n D 1 44 ARG 44 43 43 ARG ARG D . n D 1 45 GLN 45 44 44 GLN GLN D . n D 1 46 ILE 46 45 45 ILE ILE D . n D 1 47 LYS 47 46 46 LYS LYS D . n D 1 48 ILE 48 47 47 ILE ILE D . n D 1 49 TRP 49 48 48 TRP TRP D . n D 1 50 PHE 50 49 49 PHE PHE D . n D 1 51 GLN 51 50 50 GLN GLN D . n D 1 52 ASN 52 51 51 ASN ASN D . n D 1 53 ARG 53 52 52 ARG ARG D . n D 1 54 ARG 54 53 53 ARG ARG D . n D 1 55 MET 55 54 54 MET MET D . n D 1 56 LYS 56 55 55 LYS LYS D . n D 1 57 TRP 57 56 56 TRP TRP D . n D 1 58 LYS 58 57 57 LYS LYS D . n D 1 59 LYS 59 58 58 LYS LYS D . n D 1 60 GLU 60 59 59 GLU GLU D . n D 1 61 ASN 61 60 60 ASN ASN D . n E 2 1 DA 1 0 0 DA DA E . n E 2 2 DG 2 1 1 DG DG E . n E 2 3 DA 3 2 2 DA DA E . n E 2 4 DA 4 3 3 DA DA E . n E 2 5 DA 5 4 4 DA DA E . n E 2 6 DG 6 5 5 DG DG E . n E 2 7 DC 7 6 6 DC DC E . n E 2 8 C2S 8 7 7 C2S C2S E . n E 2 9 DA 9 8 8 DA DA E . n E 2 10 DT 10 9 9 DT DT E . n E 2 11 DT 11 10 10 DT DT E . n E 2 12 DA 12 11 11 DA DA E . n E 2 13 DG 13 12 12 DG DG E . n E 2 14 DA 14 13 13 DA DA E . n E 2 15 DG 15 14 14 DG DG E . n F 3 1 DT 1 23 23 DT DT F . n F 3 2 DC 2 24 24 DC DC F . n F 3 3 DT 3 25 25 DT DT F . n F 3 4 DC 4 26 26 DC DC F . n F 3 5 DT 5 27 27 DT DT F . n F 3 6 DA 6 28 28 DA DA F . n F 3 7 DA 7 29 29 DA DA F . n F 3 8 DT 8 30 30 DT DT F . n F 3 9 DG 9 31 31 DG DG F . n F 3 10 DG 10 32 32 DG DG F . n F 3 11 DC 11 33 33 DC DC F . n F 3 12 DT 12 34 34 DT DT F . n F 3 13 DT 13 35 35 DT DT F . n F 3 14 DT 14 36 36 DT DT F . n F 3 15 DC 15 37 37 DC DC F . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code G 4 NI 1 101 2 NI NI B . H 5 MPD 1 101 1 MPD MPD C . I 5 MPD 1 101 3 MPD MPD D . J 4 NI 1 102 1 NI NI D . K 4 NI 1 101 3 NI NI E . L 5 MPD 1 101 2 MPD MPD F . M 6 HOH 1 101 1 HOH HOH A . M 6 HOH 2 102 4 HOH HOH A . M 6 HOH 3 103 2 HOH HOH A . N 6 HOH 1 201 14 HOH HOH C . N 6 HOH 2 202 12 HOH HOH C . N 6 HOH 3 203 11 HOH HOH C . O 6 HOH 1 201 9 HOH HOH D . O 6 HOH 2 202 13 HOH HOH D . O 6 HOH 3 203 10 HOH HOH D . O 6 HOH 4 204 5 HOH HOH D . O 6 HOH 5 205 3 HOH HOH D . P 6 HOH 1 201 7 HOH HOH E . P 6 HOH 2 202 8 HOH HOH E . Q 6 HOH 1 201 6 HOH HOH F . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA trimeric 3 2 author_and_software_defined_assembly PISA trimeric 3 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,G,H,M,N 2 1 D,E,F,I,J,K,L,O,P,Q # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4560 ? 1 MORE -21 ? 1 'SSA (A^2)' 8420 ? 2 'ABSA (A^2)' 4360 ? 2 MORE -36 ? 2 'SSA (A^2)' 8440 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_conn_angle.id 1 _pdbx_struct_conn_angle.ptnr1_label_atom_id N7 _pdbx_struct_conn_angle.ptnr1_label_alt_id ? _pdbx_struct_conn_angle.ptnr1_label_asym_id B _pdbx_struct_conn_angle.ptnr1_label_comp_id DG _pdbx_struct_conn_angle.ptnr1_label_seq_id 2 _pdbx_struct_conn_angle.ptnr1_auth_atom_id ? _pdbx_struct_conn_angle.ptnr1_auth_asym_id B _pdbx_struct_conn_angle.ptnr1_auth_comp_id DG _pdbx_struct_conn_angle.ptnr1_auth_seq_id 1 _pdbx_struct_conn_angle.ptnr1_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr1_symmetry 1_555 _pdbx_struct_conn_angle.ptnr2_label_atom_id NI _pdbx_struct_conn_angle.ptnr2_label_alt_id ? _pdbx_struct_conn_angle.ptnr2_label_asym_id G _pdbx_struct_conn_angle.ptnr2_label_comp_id NI _pdbx_struct_conn_angle.ptnr2_label_seq_id . _pdbx_struct_conn_angle.ptnr2_auth_atom_id ? _pdbx_struct_conn_angle.ptnr2_auth_asym_id B _pdbx_struct_conn_angle.ptnr2_auth_comp_id NI _pdbx_struct_conn_angle.ptnr2_auth_seq_id 101 _pdbx_struct_conn_angle.ptnr2_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr2_symmetry 1_555 _pdbx_struct_conn_angle.ptnr3_label_atom_id O _pdbx_struct_conn_angle.ptnr3_label_alt_id ? _pdbx_struct_conn_angle.ptnr3_label_asym_id N _pdbx_struct_conn_angle.ptnr3_label_comp_id HOH _pdbx_struct_conn_angle.ptnr3_label_seq_id . _pdbx_struct_conn_angle.ptnr3_auth_atom_id ? _pdbx_struct_conn_angle.ptnr3_auth_asym_id C _pdbx_struct_conn_angle.ptnr3_auth_comp_id HOH _pdbx_struct_conn_angle.ptnr3_auth_seq_id 202 _pdbx_struct_conn_angle.ptnr3_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr3_symmetry 1_555 _pdbx_struct_conn_angle.value 97.2 _pdbx_struct_conn_angle.value_esd ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-11-25 2 'Structure model' 1 1 2016-03-16 3 'Structure model' 1 2 2017-11-22 4 'Structure model' 1 3 2023-09-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 3 'Structure model' 'Derived calculations' 3 3 'Structure model' 'Refinement description' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' 6 4 'Structure model' 'Derived calculations' 7 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' pdbx_struct_oper_list 2 3 'Structure model' software 3 4 'Structure model' chem_comp_atom 4 4 'Structure model' chem_comp_bond 5 4 'Structure model' database_2 6 4 'Structure model' pdbx_initial_refinement_model 7 4 'Structure model' struct_conn 8 4 'Structure model' struct_conn_type # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_pdbx_struct_oper_list.symmetry_operation' 2 4 'Structure model' '_database_2.pdbx_DOI' 3 4 'Structure model' '_database_2.pdbx_database_accession' 4 4 'Structure model' '_struct_conn.conn_type_id' 5 4 'Structure model' '_struct_conn.id' 6 4 'Structure model' '_struct_conn.pdbx_dist_value' 7 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 8 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 9 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 10 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 11 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 12 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 13 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 14 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 15 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 16 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 17 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 18 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 19 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 20 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 21 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 22 4 'Structure model' '_struct_conn_type.id' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 0.1818 -29.4596 27.2674 0.5442 0.0790 0.3767 0.0233 0.1000 -0.0888 0.1231 0.0637 0.0597 -0.0875 0.0406 -0.0331 0.0884 0.0696 -0.2296 0.0524 0.0914 -0.1573 0.1830 0.0773 0.2990 'X-RAY DIFFRACTION' 2 ? refined -0.4638 -15.9379 26.6569 0.2758 0.0868 0.1525 -0.0434 -0.0856 -0.0695 0.0273 0.0245 0.0325 -0.0202 -0.0013 0.0198 -0.0257 0.0084 -0.0012 0.0364 -0.0047 -0.0105 0.0070 -0.0239 0.0044 'X-RAY DIFFRACTION' 3 ? refined 7.6602 -22.8949 26.6018 0.4155 0.1622 0.3096 0.1366 -0.0377 -0.1479 0.0221 0.0047 0.0253 0.0047 -0.0079 -0.0102 0.0116 -0.0143 0.0207 -0.0290 0.0259 -0.0317 -0.0054 0.0294 0.0263 'X-RAY DIFFRACTION' 4 ? refined -1.9441 -24.3193 21.0801 0.3688 0.0829 0.1145 -0.0962 0.0219 -0.0376 0.0056 0.0368 0.0415 0.0103 0.0115 0.0240 -0.0155 0.0132 -0.0081 -0.0174 0.0012 0.0255 0.0269 -0.0199 0.0026 'X-RAY DIFFRACTION' 5 ? refined -14.1470 -26.7854 19.2626 0.6642 0.7129 0.7495 -0.2628 0.0552 -0.0829 0.0056 0.0020 0.0048 -0.0034 -0.0013 0.0003 0.0208 0.0096 -0.0025 -0.0184 0.0265 0.0359 0.0215 -0.0360 0.0000 'X-RAY DIFFRACTION' 6 ? refined 3.7818 -6.0743 10.3807 0.3115 0.2232 0.1709 -0.0859 0.1285 0.0790 0.0767 0.0317 0.1159 -0.0495 0.0383 -0.0280 -0.0114 0.0978 -0.0054 -0.0096 -0.0282 -0.0189 0.0325 -0.0073 -0.0831 'X-RAY DIFFRACTION' 7 ? refined -4.5723 -18.2177 13.2377 0.3620 0.1759 0.2845 -0.2092 0.0690 -0.1079 0.2976 0.0182 0.0074 -0.0592 0.0231 -0.0108 0.0074 0.0066 -0.0740 -0.0546 -0.0071 0.1006 0.0384 -0.0222 -0.0357 'X-RAY DIFFRACTION' 8 ? refined 0.7598 -36.3962 11.3963 1.1203 0.4236 0.6928 -0.0487 -0.0011 -0.2660 0.1385 0.3166 0.0362 -0.0968 0.0314 -0.1049 -0.0908 0.0403 -0.0933 -0.0154 -0.1027 0.0851 0.1238 -0.1070 -0.1573 'X-RAY DIFFRACTION' 9 ? refined -3.9273 -45.5487 14.7196 0.7701 0.4064 0.8382 -0.0458 -0.0644 -0.3048 0.0199 0.0181 0.0027 -0.0147 -0.0029 -0.0019 0.0217 -0.0079 0.0053 -0.0303 -0.0355 0.0167 0.0934 -0.0572 0.0166 'X-RAY DIFFRACTION' 10 ? refined 1.4327 -31.2488 15.6588 0.5385 0.1855 0.2455 -0.0468 0.0451 -0.1534 0.0095 0.0174 0.0064 -0.0035 -0.0063 0.0090 -0.0004 -0.0008 0.0165 -0.0268 0.0192 -0.0225 -0.0222 0.0146 0.0962 'X-RAY DIFFRACTION' 11 ? refined -2.7689 -14.7501 7.9863 0.7202 0.2406 0.2347 -0.0390 -0.0223 0.0211 0.2045 0.3792 0.2153 0.1607 0.1563 0.2533 -0.1596 0.0564 0.0577 -0.1494 -0.0986 -0.0271 0.1185 0.1346 -0.0930 'X-RAY DIFFRACTION' 12 ? refined -13.3480 3.5522 42.3182 0.3190 0.7349 0.2396 0.0821 0.0456 0.0803 0.0320 0.0308 0.0582 -0.0000 -0.0153 0.0012 0.0055 0.0044 0.0038 -0.0407 -0.0043 -0.0185 -0.0057 0.0218 0.0084 'X-RAY DIFFRACTION' 13 ? refined -20.9880 -4.2457 48.1865 0.0891 0.5703 0.1288 0.0881 0.0169 -0.0728 0.1936 0.0537 0.0652 -0.0999 -0.1016 0.0464 0.0195 0.0178 0.0486 -0.0035 0.0310 -0.0299 -0.0124 -0.0003 0.1673 'X-RAY DIFFRACTION' 14 ? refined -29.3009 0.1277 44.2215 0.1992 0.8070 0.3253 0.1056 -0.0194 -0.1211 0.0143 0.0173 0.0042 0.0162 -0.0080 -0.0091 0.0204 0.1023 -0.0073 -0.0240 0.0047 0.0615 -0.0089 -0.0658 0.1171 'X-RAY DIFFRACTION' 15 ? refined -23.5800 -3.0100 37.0012 0.1461 0.7864 0.1811 0.1290 -0.0696 -0.0511 0.0631 0.0030 0.0072 -0.0156 0.0228 -0.0052 -0.0046 0.0558 0.0224 -0.0308 -0.0329 0.0272 -0.0279 -0.0444 -0.0898 'X-RAY DIFFRACTION' 16 ? refined -19.4023 -17.0501 37.9804 0.9469 1.0895 0.7856 0.0793 -0.0299 -0.2848 0.0161 0.0028 0.0020 0.0005 0.0004 -0.0004 -0.0072 -0.0007 -0.0090 0.0162 -0.0170 0.0174 0.0165 0.0238 -0.0000 'X-RAY DIFFRACTION' 17 ? refined -42.1945 1.6025 26.6931 0.4001 1.2065 1.0172 0.0366 -0.3925 0.0100 0.1457 0.0246 0.0059 0.0167 -0.0280 -0.0066 -0.0035 -0.0023 0.0243 -0.0059 0.0008 -0.0112 -0.0329 0.0266 0.1039 'X-RAY DIFFRACTION' 18 ? refined -27.8379 -7.6828 28.8197 0.4477 1.6672 0.7743 0.1661 -0.1100 -0.3509 0.0669 0.0486 0.0375 0.0478 -0.0119 -0.0309 -0.0990 0.0391 -0.0055 0.0336 0.0112 -0.0812 -0.0537 -0.0506 -0.0487 'X-RAY DIFFRACTION' 19 ? refined -10.3656 0.2042 28.0048 0.3047 0.8792 0.3043 0.0818 -0.0820 0.0443 0.0128 0.0356 0.1498 -0.0129 -0.0206 -0.0315 -0.0764 0.2011 0.0507 -0.0062 -0.0088 -0.1038 -0.0829 0.0027 -0.0017 'X-RAY DIFFRACTION' 20 ? refined -2.7564 -6.0657 31.1662 0.0993 0.3034 0.1887 -0.1182 0.0652 -0.0244 0.0934 0.0360 0.0465 0.0327 -0.0528 -0.0386 -0.0157 -0.0250 -0.0591 0.0311 0.0085 0.1164 0.0280 -0.0641 -0.0560 'X-RAY DIFFRACTION' 21 ? refined -17.2114 -0.0959 31.6911 0.2016 0.8628 0.3347 0.1258 -0.0892 0.0004 0.0351 0.0824 0.0044 -0.0455 0.0116 -0.0143 -0.0025 0.0172 0.0011 -0.0155 0.0165 0.0278 -0.0258 -0.0327 0.0659 'X-RAY DIFFRACTION' 22 ? refined -33.4772 -5.5575 24.5839 0.6271 2.0289 0.8888 -0.0048 -0.2604 -0.0655 0.6269 0.1373 0.1113 -0.1307 -0.2569 0.0322 -0.2086 0.0401 -0.0292 -0.0157 -0.1636 0.0451 -0.2760 -0.0716 -0.0673 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? '(chain A and resid 1:23)' 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? '(chain A and resid 24:33)' 'X-RAY DIFFRACTION' 3 3 ? ? ? ? ? ? ? ? ? '(chain A and resid 34:43)' 'X-RAY DIFFRACTION' 4 4 ? ? ? ? ? ? ? ? ? '(chain A and resid 44:53)' 'X-RAY DIFFRACTION' 5 5 ? ? ? ? ? ? ? ? ? '(chain A and resid 54:60)' 'X-RAY DIFFRACTION' 6 6 ? ? ? ? ? ? ? ? ? '(chain B and resid 0:3)' 'X-RAY DIFFRACTION' 7 7 ? ? ? ? ? ? ? ? ? '(chain B and resid 4:7)' 'X-RAY DIFFRACTION' 8 8 ? ? ? ? ? ? ? ? ? '(chain B and resid 8:14)' 'X-RAY DIFFRACTION' 9 9 ? ? ? ? ? ? ? ? ? '(chain C and resid 23:26)' 'X-RAY DIFFRACTION' 10 10 ? ? ? ? ? ? ? ? ? '(chain C and resid 27:30)' 'X-RAY DIFFRACTION' 11 11 ? ? ? ? ? ? ? ? ? '(chain C and resid 31:37)' 'X-RAY DIFFRACTION' 12 12 ? ? ? ? ? ? ? ? ? '(chain D and resid 5:10)' 'X-RAY DIFFRACTION' 13 13 ? ? ? ? ? ? ? ? ? '(chain D and resid 11:22)' 'X-RAY DIFFRACTION' 14 14 ? ? ? ? ? ? ? ? ? '(chain D and resid 23:40)' 'X-RAY DIFFRACTION' 15 15 ? ? ? ? ? ? ? ? ? '(chain D and resid 41:55)' 'X-RAY DIFFRACTION' 16 16 ? ? ? ? ? ? ? ? ? '(chain D and resid 56:60)' 'X-RAY DIFFRACTION' 17 17 ? ? ? ? ? ? ? ? ? '(chain E and resid 0:3)' 'X-RAY DIFFRACTION' 18 18 ? ? ? ? ? ? ? ? ? '(chain E and resid 4:8)' 'X-RAY DIFFRACTION' 19 19 ? ? ? ? ? ? ? ? ? '(chain E and resid 9:14)' 'X-RAY DIFFRACTION' 20 20 ? ? ? ? ? ? ? ? ? '(chain F and resid 23:26)' 'X-RAY DIFFRACTION' 21 21 ? ? ? ? ? ? ? ? ? '(chain F and resid 27:30)' 'X-RAY DIFFRACTION' 22 22 ? ? ? ? ? ? ? ? ? '(chain F and resid 31:37)' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? dev_1810 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.15 3 ? 'model building' ? ? ? ? ? ? ? ? ? ? ? Coot ? ? ? . 4 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 5 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 N7 _pdbx_validate_close_contact.auth_asym_id_1 F _pdbx_validate_close_contact.auth_comp_id_1 DA _pdbx_validate_close_contact.auth_seq_id_1 28 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 F _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 201 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.18 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" C DT 27 ? ? "C1'" C DT 27 ? ? N1 C DT 27 ? ? 110.54 108.30 2.24 0.30 N 2 1 "O4'" E DG 1 ? ? "C1'" E DG 1 ? ? N9 E DG 1 ? ? 111.50 108.30 3.20 0.30 N 3 1 "C3'" E DC 6 ? ? "O3'" E DC 6 ? ? P E C2S 7 ? ? 126.99 119.70 7.29 1.20 Y 4 1 "O4'" F DT 27 ? ? "C1'" F DT 27 ? ? N1 F DT 27 ? ? 110.98 108.30 2.68 0.30 N # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 55 ? CG ? A LYS 56 CG 2 1 Y 1 A LYS 55 ? CD ? A LYS 56 CD 3 1 Y 1 A LYS 55 ? CE ? A LYS 56 CE 4 1 Y 1 A LYS 55 ? NZ ? A LYS 56 NZ 5 1 Y 1 D ARG 29 ? CG ? D ARG 30 CG 6 1 Y 1 D ARG 29 ? CD ? D ARG 30 CD 7 1 Y 1 D ARG 29 ? NE ? D ARG 30 NE 8 1 Y 1 D ARG 29 ? CZ ? D ARG 30 CZ 9 1 Y 1 D ARG 29 ? NH1 ? D ARG 30 NH1 10 1 Y 1 D ARG 29 ? NH2 ? D ARG 30 NH2 11 1 Y 1 D LYS 46 ? CG ? D LYS 47 CG 12 1 Y 1 D LYS 46 ? CD ? D LYS 47 CD 13 1 Y 1 D LYS 46 ? CE ? D LYS 47 CE 14 1 Y 1 D LYS 46 ? NZ ? D LYS 47 NZ 15 1 Y 1 D LYS 58 ? CG ? D LYS 59 CG 16 1 Y 1 D LYS 58 ? CD ? D LYS 59 CD 17 1 Y 1 D LYS 58 ? CE ? D LYS 59 CE 18 1 Y 1 D LYS 58 ? NZ ? D LYS 59 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 0 ? A MET 1 2 1 Y 1 A ARG 1 ? A ARG 2 3 1 Y 1 D MET 0 ? D MET 1 4 1 Y 1 D ARG 1 ? D ARG 2 5 1 Y 1 D LYS 2 ? D LYS 3 6 1 Y 1 D ARG 3 ? D ARG 4 7 1 Y 1 D GLY 4 ? D GLY 5 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 C2S OP3 O N N 58 C2S P P N S 59 C2S S1P S N N 60 C2S S2P S N N 61 C2S "O5'" O N N 62 C2S "C5'" C N N 63 C2S "C4'" C N R 64 C2S "O4'" O N N 65 C2S "C3'" C N S 66 C2S "O3'" O N N 67 C2S "C2'" C N N 68 C2S "C1'" C N R 69 C2S N1 N N N 70 C2S C2 C N N 71 C2S O2 O N N 72 C2S N3 N N N 73 C2S C4 C N N 74 C2S N4 N N N 75 C2S C5 C N N 76 C2S C6 C N N 77 C2S HOP3 H N N 78 C2S HOP2 H N N 79 C2S "H5'" H N N 80 C2S "H5''" H N N 81 C2S "H4'" H N N 82 C2S "H3'" H N N 83 C2S "HO3'" H N N 84 C2S "H2'1" H N N 85 C2S "H1'" H N N 86 C2S H41 H N N 87 C2S H42 H N N 88 C2S H5 H N N 89 C2S H6 H N N 90 C2S "H2'2" H N N 91 CYS N N N N 92 CYS CA C N R 93 CYS C C N N 94 CYS O O N N 95 CYS CB C N N 96 CYS SG S N N 97 CYS OXT O N N 98 CYS H H N N 99 CYS H2 H N N 100 CYS HA H N N 101 CYS HB2 H N N 102 CYS HB3 H N N 103 CYS HG H N N 104 CYS HXT H N N 105 DA OP3 O N N 106 DA P P N N 107 DA OP1 O N N 108 DA OP2 O N N 109 DA "O5'" O N N 110 DA "C5'" C N N 111 DA "C4'" C N R 112 DA "O4'" O N N 113 DA "C3'" C N S 114 DA "O3'" O N N 115 DA "C2'" C N N 116 DA "C1'" C N R 117 DA N9 N Y N 118 DA C8 C Y N 119 DA N7 N Y N 120 DA C5 C Y N 121 DA C6 C Y N 122 DA N6 N N N 123 DA N1 N Y N 124 DA C2 C Y N 125 DA N3 N Y N 126 DA C4 C Y N 127 DA HOP3 H N N 128 DA HOP2 H N N 129 DA "H5'" H N N 130 DA "H5''" H N N 131 DA "H4'" H N N 132 DA "H3'" H N N 133 DA "HO3'" H N N 134 DA "H2'" H N N 135 DA "H2''" H N N 136 DA "H1'" H N N 137 DA H8 H N N 138 DA H61 H N N 139 DA H62 H N N 140 DA H2 H N N 141 DC OP3 O N N 142 DC P P N N 143 DC OP1 O N N 144 DC OP2 O N N 145 DC "O5'" O N N 146 DC "C5'" C N N 147 DC "C4'" C N R 148 DC "O4'" O N N 149 DC "C3'" C N S 150 DC "O3'" O N N 151 DC "C2'" C N N 152 DC "C1'" C N R 153 DC N1 N N N 154 DC C2 C N N 155 DC O2 O N N 156 DC N3 N N N 157 DC C4 C N N 158 DC N4 N N N 159 DC C5 C N N 160 DC C6 C N N 161 DC HOP3 H N N 162 DC HOP2 H N N 163 DC "H5'" H N N 164 DC "H5''" H N N 165 DC "H4'" H N N 166 DC "H3'" H N N 167 DC "HO3'" H N N 168 DC "H2'" H N N 169 DC "H2''" H N N 170 DC "H1'" H N N 171 DC H41 H N N 172 DC H42 H N N 173 DC H5 H N N 174 DC H6 H N N 175 DG OP3 O N N 176 DG P P N N 177 DG OP1 O N N 178 DG OP2 O N N 179 DG "O5'" O N N 180 DG "C5'" C N N 181 DG "C4'" C N R 182 DG "O4'" O N N 183 DG "C3'" C N S 184 DG "O3'" O N N 185 DG "C2'" C N N 186 DG "C1'" C N R 187 DG N9 N Y N 188 DG C8 C Y N 189 DG N7 N Y N 190 DG C5 C Y N 191 DG C6 C N N 192 DG O6 O N N 193 DG N1 N N N 194 DG C2 C N N 195 DG N2 N N N 196 DG N3 N N N 197 DG C4 C Y N 198 DG HOP3 H N N 199 DG HOP2 H N N 200 DG "H5'" H N N 201 DG "H5''" H N N 202 DG "H4'" H N N 203 DG "H3'" H N N 204 DG "HO3'" H N N 205 DG "H2'" H N N 206 DG "H2''" H N N 207 DG "H1'" H N N 208 DG H8 H N N 209 DG H1 H N N 210 DG H21 H N N 211 DG H22 H N N 212 DT OP3 O N N 213 DT P P N N 214 DT OP1 O N N 215 DT OP2 O N N 216 DT "O5'" O N N 217 DT "C5'" C N N 218 DT "C4'" C N R 219 DT "O4'" O N N 220 DT "C3'" C N S 221 DT "O3'" O N N 222 DT "C2'" C N N 223 DT "C1'" C N R 224 DT N1 N N N 225 DT C2 C N N 226 DT O2 O N N 227 DT N3 N N N 228 DT C4 C N N 229 DT O4 O N N 230 DT C5 C N N 231 DT C7 C N N 232 DT C6 C N N 233 DT HOP3 H N N 234 DT HOP2 H N N 235 DT "H5'" H N N 236 DT "H5''" H N N 237 DT "H4'" H N N 238 DT "H3'" H N N 239 DT "HO3'" H N N 240 DT "H2'" H N N 241 DT "H2''" H N N 242 DT "H1'" H N N 243 DT H3 H N N 244 DT H71 H N N 245 DT H72 H N N 246 DT H73 H N N 247 DT H6 H N N 248 GLN N N N N 249 GLN CA C N S 250 GLN C C N N 251 GLN O O N N 252 GLN CB C N N 253 GLN CG C N N 254 GLN CD C N N 255 GLN OE1 O N N 256 GLN NE2 N N N 257 GLN OXT O N N 258 GLN H H N N 259 GLN H2 H N N 260 GLN HA H N N 261 GLN HB2 H N N 262 GLN HB3 H N N 263 GLN HG2 H N N 264 GLN HG3 H N N 265 GLN HE21 H N N 266 GLN HE22 H N N 267 GLN HXT H N N 268 GLU N N N N 269 GLU CA C N S 270 GLU C C N N 271 GLU O O N N 272 GLU CB C N N 273 GLU CG C N N 274 GLU CD C N N 275 GLU OE1 O N N 276 GLU OE2 O N N 277 GLU OXT O N N 278 GLU H H N N 279 GLU H2 H N N 280 GLU HA H N N 281 GLU HB2 H N N 282 GLU HB3 H N N 283 GLU HG2 H N N 284 GLU HG3 H N N 285 GLU HE2 H N N 286 GLU HXT H N N 287 GLY N N N N 288 GLY CA C N N 289 GLY C C N N 290 GLY O O N N 291 GLY OXT O N N 292 GLY H H N N 293 GLY H2 H N N 294 GLY HA2 H N N 295 GLY HA3 H N N 296 GLY HXT H N N 297 HIS N N N N 298 HIS CA C N S 299 HIS C C N N 300 HIS O O N N 301 HIS CB C N N 302 HIS CG C Y N 303 HIS ND1 N Y N 304 HIS CD2 C Y N 305 HIS CE1 C Y N 306 HIS NE2 N Y N 307 HIS OXT O N N 308 HIS H H N N 309 HIS H2 H N N 310 HIS HA H N N 311 HIS HB2 H N N 312 HIS HB3 H N N 313 HIS HD1 H N N 314 HIS HD2 H N N 315 HIS HE1 H N N 316 HIS HE2 H N N 317 HIS HXT H N N 318 HOH O O N N 319 HOH H1 H N N 320 HOH H2 H N N 321 ILE N N N N 322 ILE CA C N S 323 ILE C C N N 324 ILE O O N N 325 ILE CB C N S 326 ILE CG1 C N N 327 ILE CG2 C N N 328 ILE CD1 C N N 329 ILE OXT O N N 330 ILE H H N N 331 ILE H2 H N N 332 ILE HA H N N 333 ILE HB H N N 334 ILE HG12 H N N 335 ILE HG13 H N N 336 ILE HG21 H N N 337 ILE HG22 H N N 338 ILE HG23 H N N 339 ILE HD11 H N N 340 ILE HD12 H N N 341 ILE HD13 H N N 342 ILE HXT H N N 343 LEU N N N N 344 LEU CA C N S 345 LEU C C N N 346 LEU O O N N 347 LEU CB C N N 348 LEU CG C N N 349 LEU CD1 C N N 350 LEU CD2 C N N 351 LEU OXT O N N 352 LEU H H N N 353 LEU H2 H N N 354 LEU HA H N N 355 LEU HB2 H N N 356 LEU HB3 H N N 357 LEU HG H N N 358 LEU HD11 H N N 359 LEU HD12 H N N 360 LEU HD13 H N N 361 LEU HD21 H N N 362 LEU HD22 H N N 363 LEU HD23 H N N 364 LEU HXT H N N 365 LYS N N N N 366 LYS CA C N S 367 LYS C C N N 368 LYS O O N N 369 LYS CB C N N 370 LYS CG C N N 371 LYS CD C N N 372 LYS CE C N N 373 LYS NZ N N N 374 LYS OXT O N N 375 LYS H H N N 376 LYS H2 H N N 377 LYS HA H N N 378 LYS HB2 H N N 379 LYS HB3 H N N 380 LYS HG2 H N N 381 LYS HG3 H N N 382 LYS HD2 H N N 383 LYS HD3 H N N 384 LYS HE2 H N N 385 LYS HE3 H N N 386 LYS HZ1 H N N 387 LYS HZ2 H N N 388 LYS HZ3 H N N 389 LYS HXT H N N 390 MET N N N N 391 MET CA C N S 392 MET C C N N 393 MET O O N N 394 MET CB C N N 395 MET CG C N N 396 MET SD S N N 397 MET CE C N N 398 MET OXT O N N 399 MET H H N N 400 MET H2 H N N 401 MET HA H N N 402 MET HB2 H N N 403 MET HB3 H N N 404 MET HG2 H N N 405 MET HG3 H N N 406 MET HE1 H N N 407 MET HE2 H N N 408 MET HE3 H N N 409 MET HXT H N N 410 MPD C1 C N N 411 MPD C2 C N N 412 MPD O2 O N N 413 MPD CM C N N 414 MPD C3 C N N 415 MPD C4 C N S 416 MPD O4 O N N 417 MPD C5 C N N 418 MPD H11 H N N 419 MPD H12 H N N 420 MPD H13 H N N 421 MPD HO2 H N N 422 MPD HM1 H N N 423 MPD HM2 H N N 424 MPD HM3 H N N 425 MPD H31 H N N 426 MPD H32 H N N 427 MPD H4 H N N 428 MPD HO4 H N N 429 MPD H51 H N N 430 MPD H52 H N N 431 MPD H53 H N N 432 NI NI NI N N 433 PHE N N N N 434 PHE CA C N S 435 PHE C C N N 436 PHE O O N N 437 PHE CB C N N 438 PHE CG C Y N 439 PHE CD1 C Y N 440 PHE CD2 C Y N 441 PHE CE1 C Y N 442 PHE CE2 C Y N 443 PHE CZ C Y N 444 PHE OXT O N N 445 PHE H H N N 446 PHE H2 H N N 447 PHE HA H N N 448 PHE HB2 H N N 449 PHE HB3 H N N 450 PHE HD1 H N N 451 PHE HD2 H N N 452 PHE HE1 H N N 453 PHE HE2 H N N 454 PHE HZ H N N 455 PHE HXT H N N 456 SER N N N N 457 SER CA C N S 458 SER C C N N 459 SER O O N N 460 SER CB C N N 461 SER OG O N N 462 SER OXT O N N 463 SER H H N N 464 SER H2 H N N 465 SER HA H N N 466 SER HB2 H N N 467 SER HB3 H N N 468 SER HG H N N 469 SER HXT H N N 470 THR N N N N 471 THR CA C N S 472 THR C C N N 473 THR O O N N 474 THR CB C N R 475 THR OG1 O N N 476 THR CG2 C N N 477 THR OXT O N N 478 THR H H N N 479 THR H2 H N N 480 THR HA H N N 481 THR HB H N N 482 THR HG1 H N N 483 THR HG21 H N N 484 THR HG22 H N N 485 THR HG23 H N N 486 THR HXT H N N 487 TRP N N N N 488 TRP CA C N S 489 TRP C C N N 490 TRP O O N N 491 TRP CB C N N 492 TRP CG C Y N 493 TRP CD1 C Y N 494 TRP CD2 C Y N 495 TRP NE1 N Y N 496 TRP CE2 C Y N 497 TRP CE3 C Y N 498 TRP CZ2 C Y N 499 TRP CZ3 C Y N 500 TRP CH2 C Y N 501 TRP OXT O N N 502 TRP H H N N 503 TRP H2 H N N 504 TRP HA H N N 505 TRP HB2 H N N 506 TRP HB3 H N N 507 TRP HD1 H N N 508 TRP HE1 H N N 509 TRP HE3 H N N 510 TRP HZ2 H N N 511 TRP HZ3 H N N 512 TRP HH2 H N N 513 TRP HXT H N N 514 TYR N N N N 515 TYR CA C N S 516 TYR C C N N 517 TYR O O N N 518 TYR CB C N N 519 TYR CG C Y N 520 TYR CD1 C Y N 521 TYR CD2 C Y N 522 TYR CE1 C Y N 523 TYR CE2 C Y N 524 TYR CZ C Y N 525 TYR OH O N N 526 TYR OXT O N N 527 TYR H H N N 528 TYR H2 H N N 529 TYR HA H N N 530 TYR HB2 H N N 531 TYR HB3 H N N 532 TYR HD1 H N N 533 TYR HD2 H N N 534 TYR HE1 H N N 535 TYR HE2 H N N 536 TYR HH H N N 537 TYR HXT H N N 538 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 C2S OP3 P sing N N 55 C2S OP3 HOP3 sing N N 56 C2S P S1P doub N N 57 C2S P S2P sing N N 58 C2S P "O5'" sing N N 59 C2S S2P HOP2 sing N N 60 C2S "O5'" "C5'" sing N N 61 C2S "C5'" "C4'" sing N N 62 C2S "C5'" "H5'" sing N N 63 C2S "C5'" "H5''" sing N N 64 C2S "C4'" "O4'" sing N N 65 C2S "C4'" "C3'" sing N N 66 C2S "C4'" "H4'" sing N N 67 C2S "O4'" "C1'" sing N N 68 C2S "C3'" "O3'" sing N N 69 C2S "C3'" "C2'" sing N N 70 C2S "C3'" "H3'" sing N N 71 C2S "O3'" "HO3'" sing N N 72 C2S "C2'" "C1'" sing N N 73 C2S "C2'" "H2'1" sing N N 74 C2S "C1'" N1 sing N N 75 C2S "C1'" "H1'" sing N N 76 C2S N1 C2 sing N N 77 C2S N1 C6 sing N N 78 C2S C2 O2 doub N N 79 C2S C2 N3 sing N N 80 C2S N3 C4 doub N N 81 C2S C4 N4 sing N N 82 C2S C4 C5 sing N N 83 C2S N4 H41 sing N N 84 C2S N4 H42 sing N N 85 C2S C5 C6 doub N N 86 C2S C5 H5 sing N N 87 C2S C6 H6 sing N N 88 C2S "C2'" "H2'2" sing N N 89 CYS N CA sing N N 90 CYS N H sing N N 91 CYS N H2 sing N N 92 CYS CA C sing N N 93 CYS CA CB sing N N 94 CYS CA HA sing N N 95 CYS C O doub N N 96 CYS C OXT sing N N 97 CYS CB SG sing N N 98 CYS CB HB2 sing N N 99 CYS CB HB3 sing N N 100 CYS SG HG sing N N 101 CYS OXT HXT sing N N 102 DA OP3 P sing N N 103 DA OP3 HOP3 sing N N 104 DA P OP1 doub N N 105 DA P OP2 sing N N 106 DA P "O5'" sing N N 107 DA OP2 HOP2 sing N N 108 DA "O5'" "C5'" sing N N 109 DA "C5'" "C4'" sing N N 110 DA "C5'" "H5'" sing N N 111 DA "C5'" "H5''" sing N N 112 DA "C4'" "O4'" sing N N 113 DA "C4'" "C3'" sing N N 114 DA "C4'" "H4'" sing N N 115 DA "O4'" "C1'" sing N N 116 DA "C3'" "O3'" sing N N 117 DA "C3'" "C2'" sing N N 118 DA "C3'" "H3'" sing N N 119 DA "O3'" "HO3'" sing N N 120 DA "C2'" "C1'" sing N N 121 DA "C2'" "H2'" sing N N 122 DA "C2'" "H2''" sing N N 123 DA "C1'" N9 sing N N 124 DA "C1'" "H1'" sing N N 125 DA N9 C8 sing Y N 126 DA N9 C4 sing Y N 127 DA C8 N7 doub Y N 128 DA C8 H8 sing N N 129 DA N7 C5 sing Y N 130 DA C5 C6 sing Y N 131 DA C5 C4 doub Y N 132 DA C6 N6 sing N N 133 DA C6 N1 doub Y N 134 DA N6 H61 sing N N 135 DA N6 H62 sing N N 136 DA N1 C2 sing Y N 137 DA C2 N3 doub Y N 138 DA C2 H2 sing N N 139 DA N3 C4 sing Y N 140 DC OP3 P sing N N 141 DC OP3 HOP3 sing N N 142 DC P OP1 doub N N 143 DC P OP2 sing N N 144 DC P "O5'" sing N N 145 DC OP2 HOP2 sing N N 146 DC "O5'" "C5'" sing N N 147 DC "C5'" "C4'" sing N N 148 DC "C5'" "H5'" sing N N 149 DC "C5'" "H5''" sing N N 150 DC "C4'" "O4'" sing N N 151 DC "C4'" "C3'" sing N N 152 DC "C4'" "H4'" sing N N 153 DC "O4'" "C1'" sing N N 154 DC "C3'" "O3'" sing N N 155 DC "C3'" "C2'" sing N N 156 DC "C3'" "H3'" sing N N 157 DC "O3'" "HO3'" sing N N 158 DC "C2'" "C1'" sing N N 159 DC "C2'" "H2'" sing N N 160 DC "C2'" "H2''" sing N N 161 DC "C1'" N1 sing N N 162 DC "C1'" "H1'" sing N N 163 DC N1 C2 sing N N 164 DC N1 C6 sing N N 165 DC C2 O2 doub N N 166 DC C2 N3 sing N N 167 DC N3 C4 doub N N 168 DC C4 N4 sing N N 169 DC C4 C5 sing N N 170 DC N4 H41 sing N N 171 DC N4 H42 sing N N 172 DC C5 C6 doub N N 173 DC C5 H5 sing N N 174 DC C6 H6 sing N N 175 DG OP3 P sing N N 176 DG OP3 HOP3 sing N N 177 DG P OP1 doub N N 178 DG P OP2 sing N N 179 DG P "O5'" sing N N 180 DG OP2 HOP2 sing N N 181 DG "O5'" "C5'" sing N N 182 DG "C5'" "C4'" sing N N 183 DG "C5'" "H5'" sing N N 184 DG "C5'" "H5''" sing N N 185 DG "C4'" "O4'" sing N N 186 DG "C4'" "C3'" sing N N 187 DG "C4'" "H4'" sing N N 188 DG "O4'" "C1'" sing N N 189 DG "C3'" "O3'" sing N N 190 DG "C3'" "C2'" sing N N 191 DG "C3'" "H3'" sing N N 192 DG "O3'" "HO3'" sing N N 193 DG "C2'" "C1'" sing N N 194 DG "C2'" "H2'" sing N N 195 DG "C2'" "H2''" sing N N 196 DG "C1'" N9 sing N N 197 DG "C1'" "H1'" sing N N 198 DG N9 C8 sing Y N 199 DG N9 C4 sing Y N 200 DG C8 N7 doub Y N 201 DG C8 H8 sing N N 202 DG N7 C5 sing Y N 203 DG C5 C6 sing N N 204 DG C5 C4 doub Y N 205 DG C6 O6 doub N N 206 DG C6 N1 sing N N 207 DG N1 C2 sing N N 208 DG N1 H1 sing N N 209 DG C2 N2 sing N N 210 DG C2 N3 doub N N 211 DG N2 H21 sing N N 212 DG N2 H22 sing N N 213 DG N3 C4 sing N N 214 DT OP3 P sing N N 215 DT OP3 HOP3 sing N N 216 DT P OP1 doub N N 217 DT P OP2 sing N N 218 DT P "O5'" sing N N 219 DT OP2 HOP2 sing N N 220 DT "O5'" "C5'" sing N N 221 DT "C5'" "C4'" sing N N 222 DT "C5'" "H5'" sing N N 223 DT "C5'" "H5''" sing N N 224 DT "C4'" "O4'" sing N N 225 DT "C4'" "C3'" sing N N 226 DT "C4'" "H4'" sing N N 227 DT "O4'" "C1'" sing N N 228 DT "C3'" "O3'" sing N N 229 DT "C3'" "C2'" sing N N 230 DT "C3'" "H3'" sing N N 231 DT "O3'" "HO3'" sing N N 232 DT "C2'" "C1'" sing N N 233 DT "C2'" "H2'" sing N N 234 DT "C2'" "H2''" sing N N 235 DT "C1'" N1 sing N N 236 DT "C1'" "H1'" sing N N 237 DT N1 C2 sing N N 238 DT N1 C6 sing N N 239 DT C2 O2 doub N N 240 DT C2 N3 sing N N 241 DT N3 C4 sing N N 242 DT N3 H3 sing N N 243 DT C4 O4 doub N N 244 DT C4 C5 sing N N 245 DT C5 C7 sing N N 246 DT C5 C6 doub N N 247 DT C7 H71 sing N N 248 DT C7 H72 sing N N 249 DT C7 H73 sing N N 250 DT C6 H6 sing N N 251 GLN N CA sing N N 252 GLN N H sing N N 253 GLN N H2 sing N N 254 GLN CA C sing N N 255 GLN CA CB sing N N 256 GLN CA HA sing N N 257 GLN C O doub N N 258 GLN C OXT sing N N 259 GLN CB CG sing N N 260 GLN CB HB2 sing N N 261 GLN CB HB3 sing N N 262 GLN CG CD sing N N 263 GLN CG HG2 sing N N 264 GLN CG HG3 sing N N 265 GLN CD OE1 doub N N 266 GLN CD NE2 sing N N 267 GLN NE2 HE21 sing N N 268 GLN NE2 HE22 sing N N 269 GLN OXT HXT sing N N 270 GLU N CA sing N N 271 GLU N H sing N N 272 GLU N H2 sing N N 273 GLU CA C sing N N 274 GLU CA CB sing N N 275 GLU CA HA sing N N 276 GLU C O doub N N 277 GLU C OXT sing N N 278 GLU CB CG sing N N 279 GLU CB HB2 sing N N 280 GLU CB HB3 sing N N 281 GLU CG CD sing N N 282 GLU CG HG2 sing N N 283 GLU CG HG3 sing N N 284 GLU CD OE1 doub N N 285 GLU CD OE2 sing N N 286 GLU OE2 HE2 sing N N 287 GLU OXT HXT sing N N 288 GLY N CA sing N N 289 GLY N H sing N N 290 GLY N H2 sing N N 291 GLY CA C sing N N 292 GLY CA HA2 sing N N 293 GLY CA HA3 sing N N 294 GLY C O doub N N 295 GLY C OXT sing N N 296 GLY OXT HXT sing N N 297 HIS N CA sing N N 298 HIS N H sing N N 299 HIS N H2 sing N N 300 HIS CA C sing N N 301 HIS CA CB sing N N 302 HIS CA HA sing N N 303 HIS C O doub N N 304 HIS C OXT sing N N 305 HIS CB CG sing N N 306 HIS CB HB2 sing N N 307 HIS CB HB3 sing N N 308 HIS CG ND1 sing Y N 309 HIS CG CD2 doub Y N 310 HIS ND1 CE1 doub Y N 311 HIS ND1 HD1 sing N N 312 HIS CD2 NE2 sing Y N 313 HIS CD2 HD2 sing N N 314 HIS CE1 NE2 sing Y N 315 HIS CE1 HE1 sing N N 316 HIS NE2 HE2 sing N N 317 HIS OXT HXT sing N N 318 HOH O H1 sing N N 319 HOH O H2 sing N N 320 ILE N CA sing N N 321 ILE N H sing N N 322 ILE N H2 sing N N 323 ILE CA C sing N N 324 ILE CA CB sing N N 325 ILE CA HA sing N N 326 ILE C O doub N N 327 ILE C OXT sing N N 328 ILE CB CG1 sing N N 329 ILE CB CG2 sing N N 330 ILE CB HB sing N N 331 ILE CG1 CD1 sing N N 332 ILE CG1 HG12 sing N N 333 ILE CG1 HG13 sing N N 334 ILE CG2 HG21 sing N N 335 ILE CG2 HG22 sing N N 336 ILE CG2 HG23 sing N N 337 ILE CD1 HD11 sing N N 338 ILE CD1 HD12 sing N N 339 ILE CD1 HD13 sing N N 340 ILE OXT HXT sing N N 341 LEU N CA sing N N 342 LEU N H sing N N 343 LEU N H2 sing N N 344 LEU CA C sing N N 345 LEU CA CB sing N N 346 LEU CA HA sing N N 347 LEU C O doub N N 348 LEU C OXT sing N N 349 LEU CB CG sing N N 350 LEU CB HB2 sing N N 351 LEU CB HB3 sing N N 352 LEU CG CD1 sing N N 353 LEU CG CD2 sing N N 354 LEU CG HG sing N N 355 LEU CD1 HD11 sing N N 356 LEU CD1 HD12 sing N N 357 LEU CD1 HD13 sing N N 358 LEU CD2 HD21 sing N N 359 LEU CD2 HD22 sing N N 360 LEU CD2 HD23 sing N N 361 LEU OXT HXT sing N N 362 LYS N CA sing N N 363 LYS N H sing N N 364 LYS N H2 sing N N 365 LYS CA C sing N N 366 LYS CA CB sing N N 367 LYS CA HA sing N N 368 LYS C O doub N N 369 LYS C OXT sing N N 370 LYS CB CG sing N N 371 LYS CB HB2 sing N N 372 LYS CB HB3 sing N N 373 LYS CG CD sing N N 374 LYS CG HG2 sing N N 375 LYS CG HG3 sing N N 376 LYS CD CE sing N N 377 LYS CD HD2 sing N N 378 LYS CD HD3 sing N N 379 LYS CE NZ sing N N 380 LYS CE HE2 sing N N 381 LYS CE HE3 sing N N 382 LYS NZ HZ1 sing N N 383 LYS NZ HZ2 sing N N 384 LYS NZ HZ3 sing N N 385 LYS OXT HXT sing N N 386 MET N CA sing N N 387 MET N H sing N N 388 MET N H2 sing N N 389 MET CA C sing N N 390 MET CA CB sing N N 391 MET CA HA sing N N 392 MET C O doub N N 393 MET C OXT sing N N 394 MET CB CG sing N N 395 MET CB HB2 sing N N 396 MET CB HB3 sing N N 397 MET CG SD sing N N 398 MET CG HG2 sing N N 399 MET CG HG3 sing N N 400 MET SD CE sing N N 401 MET CE HE1 sing N N 402 MET CE HE2 sing N N 403 MET CE HE3 sing N N 404 MET OXT HXT sing N N 405 MPD C1 C2 sing N N 406 MPD C1 H11 sing N N 407 MPD C1 H12 sing N N 408 MPD C1 H13 sing N N 409 MPD C2 O2 sing N N 410 MPD C2 CM sing N N 411 MPD C2 C3 sing N N 412 MPD O2 HO2 sing N N 413 MPD CM HM1 sing N N 414 MPD CM HM2 sing N N 415 MPD CM HM3 sing N N 416 MPD C3 C4 sing N N 417 MPD C3 H31 sing N N 418 MPD C3 H32 sing N N 419 MPD C4 O4 sing N N 420 MPD C4 C5 sing N N 421 MPD C4 H4 sing N N 422 MPD O4 HO4 sing N N 423 MPD C5 H51 sing N N 424 MPD C5 H52 sing N N 425 MPD C5 H53 sing N N 426 PHE N CA sing N N 427 PHE N H sing N N 428 PHE N H2 sing N N 429 PHE CA C sing N N 430 PHE CA CB sing N N 431 PHE CA HA sing N N 432 PHE C O doub N N 433 PHE C OXT sing N N 434 PHE CB CG sing N N 435 PHE CB HB2 sing N N 436 PHE CB HB3 sing N N 437 PHE CG CD1 doub Y N 438 PHE CG CD2 sing Y N 439 PHE CD1 CE1 sing Y N 440 PHE CD1 HD1 sing N N 441 PHE CD2 CE2 doub Y N 442 PHE CD2 HD2 sing N N 443 PHE CE1 CZ doub Y N 444 PHE CE1 HE1 sing N N 445 PHE CE2 CZ sing Y N 446 PHE CE2 HE2 sing N N 447 PHE CZ HZ sing N N 448 PHE OXT HXT sing N N 449 SER N CA sing N N 450 SER N H sing N N 451 SER N H2 sing N N 452 SER CA C sing N N 453 SER CA CB sing N N 454 SER CA HA sing N N 455 SER C O doub N N 456 SER C OXT sing N N 457 SER CB OG sing N N 458 SER CB HB2 sing N N 459 SER CB HB3 sing N N 460 SER OG HG sing N N 461 SER OXT HXT sing N N 462 THR N CA sing N N 463 THR N H sing N N 464 THR N H2 sing N N 465 THR CA C sing N N 466 THR CA CB sing N N 467 THR CA HA sing N N 468 THR C O doub N N 469 THR C OXT sing N N 470 THR CB OG1 sing N N 471 THR CB CG2 sing N N 472 THR CB HB sing N N 473 THR OG1 HG1 sing N N 474 THR CG2 HG21 sing N N 475 THR CG2 HG22 sing N N 476 THR CG2 HG23 sing N N 477 THR OXT HXT sing N N 478 TRP N CA sing N N 479 TRP N H sing N N 480 TRP N H2 sing N N 481 TRP CA C sing N N 482 TRP CA CB sing N N 483 TRP CA HA sing N N 484 TRP C O doub N N 485 TRP C OXT sing N N 486 TRP CB CG sing N N 487 TRP CB HB2 sing N N 488 TRP CB HB3 sing N N 489 TRP CG CD1 doub Y N 490 TRP CG CD2 sing Y N 491 TRP CD1 NE1 sing Y N 492 TRP CD1 HD1 sing N N 493 TRP CD2 CE2 doub Y N 494 TRP CD2 CE3 sing Y N 495 TRP NE1 CE2 sing Y N 496 TRP NE1 HE1 sing N N 497 TRP CE2 CZ2 sing Y N 498 TRP CE3 CZ3 doub Y N 499 TRP CE3 HE3 sing N N 500 TRP CZ2 CH2 doub Y N 501 TRP CZ2 HZ2 sing N N 502 TRP CZ3 CH2 sing Y N 503 TRP CZ3 HZ3 sing N N 504 TRP CH2 HH2 sing N N 505 TRP OXT HXT sing N N 506 TYR N CA sing N N 507 TYR N H sing N N 508 TYR N H2 sing N N 509 TYR CA C sing N N 510 TYR CA CB sing N N 511 TYR CA HA sing N N 512 TYR C O doub N N 513 TYR C OXT sing N N 514 TYR CB CG sing N N 515 TYR CB HB2 sing N N 516 TYR CB HB3 sing N N 517 TYR CG CD1 doub Y N 518 TYR CG CD2 sing Y N 519 TYR CD1 CE1 sing Y N 520 TYR CD1 HD1 sing N N 521 TYR CD2 CE2 doub Y N 522 TYR CD2 HD2 sing N N 523 TYR CE1 CZ doub Y N 524 TYR CE1 HE1 sing N N 525 TYR CE2 CZ sing Y N 526 TYR CE2 HE2 sing N N 527 TYR CZ OH sing N N 528 TYR OH HH sing N N 529 TYR OXT HXT sing N N 530 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 4XIC 'double helix' 4XIC 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DG 2 1_555 C DC 15 1_555 0.031 -0.210 -0.152 7.270 -2.540 -0.421 1 B_DG1:DC37_C B 1 ? C 37 ? 19 1 1 B DA 3 1_555 C DT 14 1_555 -0.108 -0.101 0.274 12.891 -16.576 -6.383 2 B_DA2:DT36_C B 2 ? C 36 ? 20 1 1 B DA 4 1_555 C DT 13 1_555 -0.101 -0.242 0.336 3.044 -13.832 1.185 3 B_DA3:DT35_C B 3 ? C 35 ? 20 1 1 B DA 5 1_555 C DT 12 1_555 -0.027 -0.195 0.576 5.245 -8.165 -5.377 4 B_DA4:DT34_C B 4 ? C 34 ? 20 1 1 B DG 6 1_555 C DC 11 1_555 -0.441 -0.257 0.435 3.445 -10.617 -2.156 5 B_DG5:DC33_C B 5 ? C 33 ? 19 1 1 B DC 7 1_555 C DG 10 1_555 -0.663 -0.102 0.052 0.244 -8.304 2.166 6 B_DC6:DG32_C B 6 ? C 32 ? 19 1 1 B C2S 8 1_555 C DG 9 1_555 0.622 -0.288 0.039 10.776 -9.981 1.544 7 B_C2S7:DG31_C B 7 ? C 31 ? 19 1 1 B DA 9 1_555 C DT 8 1_555 0.269 -0.130 0.197 0.576 -12.535 -0.801 8 B_DA8:DT30_C B 8 ? C 30 ? 20 1 1 B DT 10 1_555 C DA 7 1_555 -0.401 -0.090 0.166 -0.513 -7.065 1.202 9 B_DT9:DA29_C B 9 ? C 29 ? 20 1 1 B DT 11 1_555 C DA 6 1_555 -0.264 -0.193 0.129 -2.114 -15.076 -2.056 10 B_DT10:DA28_C B 10 ? C 28 ? 20 1 1 B DA 12 1_555 C DT 5 1_555 0.163 -0.170 0.129 -2.509 1.651 5.704 11 B_DA11:DT27_C B 11 ? C 27 ? 20 1 1 B DG 13 1_555 C DC 4 1_555 0.097 -0.100 -0.107 -4.827 -9.608 0.568 12 B_DG12:DC26_C B 12 ? C 26 ? 19 1 1 B DA 14 1_555 C DT 3 1_555 0.501 -0.058 0.215 -1.984 -7.036 -3.971 13 B_DA13:DT25_C B 13 ? C 25 ? 20 1 1 B DG 15 1_555 C DC 2 1_555 0.818 -0.163 0.288 3.379 -7.842 0.201 14 B_DG14:DC24_C B 14 ? C 24 ? 19 1 1 E DG 2 1_555 F DC 15 1_555 0.814 -0.122 -0.051 3.162 -3.488 0.497 15 E_DG1:DC37_F E 1 ? F 37 ? 19 1 1 E DA 3 1_555 F DT 14 1_555 -0.279 -0.119 0.257 6.179 -13.524 -1.693 16 E_DA2:DT36_F E 2 ? F 36 ? 20 1 1 E DA 4 1_555 F DT 13 1_555 -0.177 -0.224 0.038 -0.798 -11.889 4.477 17 E_DA3:DT35_F E 3 ? F 35 ? 20 1 1 E DA 5 1_555 F DT 12 1_555 0.285 -0.044 0.182 3.634 -6.592 -4.425 18 E_DA4:DT34_F E 4 ? F 34 ? 20 1 1 E DG 6 1_555 F DC 11 1_555 -0.118 -0.086 0.144 1.087 -9.216 -0.727 19 E_DG5:DC33_F E 5 ? F 33 ? 19 1 1 E DC 7 1_555 F DG 10 1_555 -0.728 -0.084 -0.115 0.718 -1.575 1.514 20 E_DC6:DG32_F E 6 ? F 32 ? 19 1 1 E C2S 8 1_555 F DG 9 1_555 -0.188 -0.073 -0.127 9.363 -9.928 3.815 21 E_C2S7:DG31_F E 7 ? F 31 ? 19 1 1 E DA 9 1_555 F DT 8 1_555 0.441 -0.079 0.106 4.248 -13.264 -3.463 22 E_DA8:DT30_F E 8 ? F 30 ? 20 1 1 E DT 10 1_555 F DA 7 1_555 -0.839 -0.175 -0.020 -0.589 -9.238 2.582 23 E_DT9:DA29_F E 9 ? F 29 ? 20 1 1 E DT 11 1_555 F DA 6 1_555 -0.184 -0.100 0.103 -0.023 -10.270 -2.614 24 E_DT10:DA28_F E 10 ? F 28 ? 20 1 1 E DA 12 1_555 F DT 5 1_555 0.366 -0.208 0.274 -0.999 -1.517 4.942 25 E_DA11:DT27_F E 11 ? F 27 ? 20 1 1 E DG 13 1_555 F DC 4 1_555 0.852 -0.140 0.065 -1.999 -5.821 -0.335 26 E_DG12:DC26_F E 12 ? F 26 ? 19 1 1 E DA 14 1_555 F DT 3 1_555 -0.028 -0.062 0.330 0.202 -0.970 -4.997 27 E_DA13:DT25_F E 13 ? F 25 ? 20 1 1 E DG 15 1_555 F DC 2 1_555 0.644 -0.071 0.040 4.991 -5.655 -0.125 28 E_DG14:DC24_F E 14 ? F 24 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DG 2 1_555 C DC 15 1_555 B DA 3 1_555 C DT 14 1_555 -1.029 1.251 3.197 -5.188 3.016 35.619 1.586 0.915 3.400 4.888 8.407 36.105 1 BB_DG1DA2:DT36DC37_CC B 1 ? C 37 ? B 2 ? C 36 ? 1 B DA 3 1_555 C DT 14 1_555 B DA 4 1_555 C DT 13 1_555 0.357 -0.559 3.464 -1.577 -2.298 36.629 -0.554 -0.794 3.473 -3.650 2.505 36.731 2 BB_DA2DA3:DT35DT36_CC B 2 ? C 36 ? B 3 ? C 35 ? 1 B DA 4 1_555 C DT 13 1_555 B DA 5 1_555 C DT 12 1_555 -0.102 -0.492 3.066 -3.255 -5.195 36.606 -0.114 -0.253 3.101 -8.200 5.137 37.098 3 BB_DA3DA4:DT34DT35_CC B 3 ? C 35 ? B 4 ? C 34 ? 1 B DA 5 1_555 C DT 12 1_555 B DG 6 1_555 C DC 11 1_555 0.118 -1.022 3.257 -3.828 1.191 36.441 -1.787 -0.706 3.195 1.898 6.099 36.654 4 BB_DA4DG5:DC33DT34_CC B 4 ? C 34 ? B 5 ? C 33 ? 1 B DG 6 1_555 C DC 11 1_555 B DC 7 1_555 C DG 10 1_555 0.000 -0.273 3.388 4.702 -2.753 32.236 0.011 0.846 3.366 -4.914 -8.393 32.682 5 BB_DG5DC6:DG32DC33_CC B 5 ? C 33 ? B 6 ? C 32 ? 1 B DC 7 1_555 C DG 10 1_555 B C2S 8 1_555 C DG 9 1_555 0.442 0.196 3.121 2.364 4.681 33.861 -0.377 -0.392 3.142 7.977 -4.029 34.253 6 BB_DC6C2S7:DG31DG32_CC B 6 ? C 32 ? B 7 ? C 31 ? 1 B C2S 8 1_555 C DG 9 1_555 B DA 9 1_555 C DT 8 1_555 0.263 0.205 3.540 -0.964 8.911 36.403 -0.955 -0.548 3.485 14.004 1.514 37.454 7 BB_C2S7DA8:DT30DG31_CC B 7 ? C 31 ? B 8 ? C 30 ? 1 B DA 9 1_555 C DT 8 1_555 B DT 10 1_555 C DA 7 1_555 0.694 -1.252 3.230 1.210 0.652 27.206 -2.820 -1.175 3.227 1.385 -2.571 27.240 8 BB_DA8DT9:DA29DT30_CC B 8 ? C 30 ? B 9 ? C 29 ? 1 B DT 10 1_555 C DA 7 1_555 B DT 11 1_555 C DA 6 1_555 -0.586 -0.813 3.238 1.095 -0.516 33.928 -1.311 1.177 3.230 -0.884 -1.876 33.949 9 BB_DT9DT10:DA28DA29_CC B 9 ? C 29 ? B 10 ? C 28 ? 1 B DT 11 1_555 C DA 6 1_555 B DA 12 1_555 C DT 5 1_555 1.059 0.738 3.386 2.103 2.275 42.616 0.773 -1.232 3.465 3.126 -2.889 42.724 10 BB_DT10DA11:DT27DA28_CC B 10 ? C 28 ? B 11 ? C 27 ? 1 B DA 12 1_555 C DT 5 1_555 B DG 13 1_555 C DC 4 1_555 -1.628 0.469 3.564 -3.521 1.060 31.222 0.643 2.268 3.734 1.961 6.513 31.433 11 BB_DA11DG12:DC26DT27_CC B 11 ? C 27 ? B 12 ? C 26 ? 1 B DG 13 1_555 C DC 4 1_555 B DA 14 1_555 C DT 3 1_555 -0.389 0.756 3.273 -7.022 0.546 38.964 1.052 -0.259 3.301 0.811 10.423 39.571 12 BB_DG12DA13:DT25DC26_CC B 12 ? C 26 ? B 13 ? C 25 ? 1 B DA 14 1_555 C DT 3 1_555 B DG 15 1_555 C DC 2 1_555 -0.296 0.397 3.211 -1.305 -0.778 35.269 0.767 0.299 3.211 -1.284 2.153 35.301 13 BB_DA13DG14:DC24DT25_CC B 13 ? C 25 ? B 14 ? C 24 ? 1 E DG 2 1_555 F DC 15 1_555 E DA 3 1_555 F DT 14 1_555 -0.586 0.422 3.266 -5.188 -0.010 32.525 0.745 0.137 3.317 -0.017 9.190 32.925 14 EE_DG1DA2:DT36DC37_FF E 1 ? F 37 ? E 2 ? F 36 ? 1 E DA 3 1_555 F DT 14 1_555 E DA 4 1_555 F DT 13 1_555 0.440 -0.817 3.432 1.568 -0.984 35.243 -1.193 -0.481 3.469 -1.624 -2.587 35.290 15 EE_DA2DA3:DT35DT36_FF E 2 ? F 36 ? E 3 ? F 35 ? 1 E DA 4 1_555 F DT 13 1_555 E DA 5 1_555 F DT 12 1_555 -0.495 -0.375 3.085 -3.060 -4.149 38.075 -0.077 0.388 3.136 -6.324 4.665 38.410 16 EE_DA3DA4:DT34DT35_FF E 3 ? F 35 ? E 4 ? F 34 ? 1 E DA 5 1_555 F DT 12 1_555 E DG 6 1_555 F DC 11 1_555 0.022 -0.849 3.205 -4.422 4.524 35.603 -1.984 -0.637 3.053 7.328 7.162 36.143 17 EE_DA4DG5:DC33DT34_FF E 4 ? F 34 ? E 5 ? F 33 ? 1 E DG 6 1_555 F DC 11 1_555 E DC 7 1_555 F DG 10 1_555 -0.126 -0.452 3.314 2.317 -1.249 29.273 -0.618 0.752 3.310 -2.466 -4.572 29.388 18 EE_DG5DC6:DG32DC33_FF E 5 ? F 33 ? E 6 ? F 32 ? 1 E DC 7 1_555 F DG 10 1_555 E C2S 8 1_555 F DG 9 1_555 0.241 0.167 3.015 0.996 8.368 32.545 -0.986 -0.265 2.971 14.628 -1.741 33.589 19 EE_DC6C2S7:DG31DG32_FF E 6 ? F 32 ? E 7 ? F 31 ? 1 E C2S 8 1_555 F DG 9 1_555 E DA 9 1_555 F DT 8 1_555 -0.215 0.235 3.536 -1.981 6.126 39.219 -0.431 0.065 3.537 9.053 2.928 39.723 20 EE_C2S7DA8:DT30DG31_FF E 7 ? F 31 ? E 8 ? F 30 ? 1 E DA 9 1_555 F DT 8 1_555 E DT 10 1_555 F DA 7 1_555 0.749 -1.225 3.394 0.202 1.402 24.448 -3.336 -1.702 3.325 3.308 -0.475 24.489 21 EE_DA8DT9:DA29DT30_FF E 8 ? F 30 ? E 9 ? F 29 ? 1 E DT 10 1_555 F DA 7 1_555 E DT 11 1_555 F DA 6 1_555 -0.564 -0.736 3.221 -0.740 -1.994 35.800 -0.912 0.811 3.266 -3.240 1.202 35.861 22 EE_DT9DT10:DA28DA29_FF E 9 ? F 29 ? E 10 ? F 28 ? 1 E DT 11 1_555 F DA 6 1_555 E DA 12 1_555 F DT 5 1_555 1.118 0.655 3.380 3.344 2.482 42.238 0.640 -1.188 3.486 3.434 -4.627 42.433 23 EE_DT10DA11:DT27DA28_FF E 10 ? F 28 ? E 11 ? F 27 ? 1 E DA 12 1_555 F DT 5 1_555 E DG 13 1_555 F DC 4 1_555 -1.230 0.222 3.340 -3.037 3.954 34.081 -0.265 1.586 3.437 6.701 5.147 34.433 24 EE_DA11DG12:DC26DT27_FF E 11 ? F 27 ? E 12 ? F 26 ? 1 E DG 13 1_555 F DC 4 1_555 E DA 14 1_555 F DT 3 1_555 -0.536 0.059 3.280 -7.498 -0.707 32.485 0.224 -0.341 3.316 -1.242 13.183 33.323 25 EE_DG12DA13:DT25DC26_FF E 12 ? F 26 ? E 13 ? F 25 ? 1 E DA 14 1_555 F DT 3 1_555 E DG 15 1_555 F DC 2 1_555 -0.022 0.124 3.255 1.366 1.299 36.122 0.017 0.227 3.254 2.094 -2.201 36.170 26 EE_DA13DG14:DC24DT25_FF E 13 ? F 25 ? E 14 ? F 24 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'NICKEL (II) ION' NI 5 '(4S)-2-METHYL-2,4-PENTANEDIOL' MPD 6 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 4XID _pdbx_initial_refinement_model.details 'PDB entry 4XID' #