HEADER UNKNOWN FUNCTION 07-JAN-15 4XIN TITLE X-RAY CRYSTAL STRUCTURE OF AN LPQH ORTHOLOGUE FROM MYCOBACTERIUM AVIUM COMPND MOL_ID: 1; COMPND 2 MOLECULE: LPQH ORTHOLOGUE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM AVIUM (STRAIN 104); SOURCE 3 ORGANISM_TAXID: 243243; SOURCE 4 STRAIN: 104; SOURCE 5 GENE: MAV_0969; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS SSGCID, LPQH, MYCOBACTERIUM AVIUM, STRUCTURAL GENOMICS, SEATTLE KEYWDS 2 STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR J.W.FAIRMAN,J.ABENDROTH,D.LORIMER,T.E.EDWARDS,SEATTLE STRUCTURAL AUTHOR 2 GENOMICS CENTER FOR INFECTIOUS DISEASE (SSGCID) REVDAT 5 06-NOV-24 4XIN 1 REMARK LINK REVDAT 4 11-DEC-19 4XIN 1 REMARK REVDAT 3 22-NOV-17 4XIN 1 REMARK REVDAT 2 06-SEP-17 4XIN 1 SOURCE KEYWDS REMARK REVDAT 1 04-MAR-15 4XIN 0 JRNL AUTH J.W.FAIRMAN,J.ABENDROTH,D.LORIMER,T.E.EDWARDS JRNL TITL X-RAY CRYSTAL STRUCTURE OF AN LPQH ORTHOLOGUE FROM JRNL TITL 2 MYCOBACTERIUM AVIUM JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 31.39 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.990 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.0 REMARK 3 NUMBER OF REFLECTIONS : 27426 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.162 REMARK 3 R VALUE (WORKING SET) : 0.160 REMARK 3 FREE R VALUE : 0.195 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.970 REMARK 3 FREE R VALUE TEST SET COUNT : 1362 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 31.3983 - 3.2308 0.96 2631 135 0.1440 0.1728 REMARK 3 2 3.2308 - 2.5648 0.97 2694 126 0.1653 0.1900 REMARK 3 3 2.5648 - 2.2407 0.96 2617 120 0.1649 0.2060 REMARK 3 4 2.2407 - 2.0359 0.95 2612 153 0.1529 0.2020 REMARK 3 5 2.0359 - 1.8900 0.93 2526 159 0.1542 0.1895 REMARK 3 6 1.8900 - 1.7785 0.95 2572 141 0.1797 0.2232 REMARK 3 7 1.7785 - 1.6895 0.95 2597 143 0.1698 0.2044 REMARK 3 8 1.6895 - 1.6159 0.95 2611 125 0.1807 0.2060 REMARK 3 9 1.6159 - 1.5537 0.95 2629 125 0.1869 0.2160 REMARK 3 10 1.5537 - 1.5001 0.94 2575 135 0.1907 0.2423 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.140 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.040 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 14.72 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.30 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 1726 REMARK 3 ANGLE : 1.246 2360 REMARK 3 CHIRALITY : 0.056 277 REMARK 3 PLANARITY : 0.005 312 REMARK 3 DIHEDRAL : 11.110 635 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 17 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 13 THROUGH 17 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.6833 -2.8992 38.2445 REMARK 3 T TENSOR REMARK 3 T11: 0.1924 T22: 0.4297 REMARK 3 T33: 0.3538 T12: -0.0678 REMARK 3 T13: -0.0216 T23: -0.0204 REMARK 3 L TENSOR REMARK 3 L11: 5.3065 L22: 6.9406 REMARK 3 L33: 9.2830 L12: 0.1712 REMARK 3 L13: 2.4493 L23: -2.0494 REMARK 3 S TENSOR REMARK 3 S11: 0.4955 S12: -0.7567 S13: -0.5428 REMARK 3 S21: 0.2254 S22: 0.3698 S23: -0.2279 REMARK 3 S31: 0.3691 S32: 0.0774 S33: -0.7948 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 18 THROUGH 30 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.8094 3.3772 40.3876 REMARK 3 T TENSOR REMARK 3 T11: 0.2003 T22: 0.2754 REMARK 3 T33: 0.1420 T12: -0.0413 REMARK 3 T13: -0.0141 T23: 0.0122 REMARK 3 L TENSOR REMARK 3 L11: 6.6833 L22: 2.2740 REMARK 3 L33: 1.7286 L12: 2.1916 REMARK 3 L13: -0.9914 L23: -0.4156 REMARK 3 S TENSOR REMARK 3 S11: 0.2108 S12: -1.2607 S13: -0.0181 REMARK 3 S21: 0.2497 S22: -0.3564 S23: -0.1353 REMARK 3 S31: 0.2197 S32: 0.0933 S33: 0.1550 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 31 THROUGH 38 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.7293 5.7966 31.5620 REMARK 3 T TENSOR REMARK 3 T11: 0.1526 T22: 0.2408 REMARK 3 T33: 0.5011 T12: 0.0209 REMARK 3 T13: 0.0138 T23: 0.0529 REMARK 3 L TENSOR REMARK 3 L11: 6.3286 L22: 6.2207 REMARK 3 L33: 8.6759 L12: 0.2424 REMARK 3 L13: 2.5124 L23: 0.9874 REMARK 3 S TENSOR REMARK 3 S11: 0.1476 S12: 0.4003 S13: 0.1199 REMARK 3 S21: -0.0537 S22: 0.2204 S23: 1.2750 REMARK 3 S31: -0.4786 S32: -0.2337 S33: -0.2142 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 39 THROUGH 47 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.3235 6.3155 26.4024 REMARK 3 T TENSOR REMARK 3 T11: 0.1638 T22: 0.3018 REMARK 3 T33: 0.3342 T12: 0.0421 REMARK 3 T13: -0.0712 T23: -0.0008 REMARK 3 L TENSOR REMARK 3 L11: 3.9542 L22: 4.5087 REMARK 3 L33: 2.3174 L12: 1.3560 REMARK 3 L13: 2.3426 L23: 1.2193 REMARK 3 S TENSOR REMARK 3 S11: 0.0555 S12: 0.5658 S13: 0.2335 REMARK 3 S21: -0.3839 S22: -0.2957 S23: 0.8625 REMARK 3 S31: -0.0120 S32: -0.7520 S33: 0.1094 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 48 THROUGH 58 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.2502 10.2473 30.8376 REMARK 3 T TENSOR REMARK 3 T11: 0.1843 T22: 0.1353 REMARK 3 T33: 0.2374 T12: 0.0166 REMARK 3 T13: -0.0342 T23: 0.0184 REMARK 3 L TENSOR REMARK 3 L11: 3.8484 L22: 6.8139 REMARK 3 L33: 5.6518 L12: 0.5909 REMARK 3 L13: 0.3361 L23: 5.5204 REMARK 3 S TENSOR REMARK 3 S11: -0.1143 S12: -0.1197 S13: 0.3713 REMARK 3 S21: -0.4101 S22: -0.2128 S23: 0.6974 REMARK 3 S31: -0.8435 S32: -0.3022 S33: 0.3922 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 59 THROUGH 82 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.3746 6.9217 26.5463 REMARK 3 T TENSOR REMARK 3 T11: 0.1379 T22: 0.1266 REMARK 3 T33: 0.1633 T12: 0.0085 REMARK 3 T13: -0.0083 T23: -0.0068 REMARK 3 L TENSOR REMARK 3 L11: 3.1713 L22: 4.0596 REMARK 3 L33: 3.8234 L12: 1.2365 REMARK 3 L13: 0.2292 L23: 1.2865 REMARK 3 S TENSOR REMARK 3 S11: -0.0730 S12: 0.3519 S13: -0.1382 REMARK 3 S21: -0.2349 S22: -0.0869 S23: 0.3267 REMARK 3 S31: 0.1918 S32: -0.2279 S33: 0.1151 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 83 THROUGH 96 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.5453 0.1560 24.3604 REMARK 3 T TENSOR REMARK 3 T11: 0.1528 T22: 0.1545 REMARK 3 T33: 0.1733 T12: 0.0243 REMARK 3 T13: -0.0166 T23: -0.0181 REMARK 3 L TENSOR REMARK 3 L11: 6.7788 L22: 6.9387 REMARK 3 L33: 2.1497 L12: 5.9485 REMARK 3 L13: -2.1648 L23: -2.4313 REMARK 3 S TENSOR REMARK 3 S11: -0.1630 S12: 0.3108 S13: -0.2841 REMARK 3 S21: -0.3239 S22: 0.0853 S23: 0.0150 REMARK 3 S31: 0.1238 S32: -0.0893 S33: 0.0704 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 97 THROUGH 111 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.7234 7.4452 33.2668 REMARK 3 T TENSOR REMARK 3 T11: 0.1098 T22: 0.1118 REMARK 3 T33: 0.1222 T12: 0.0234 REMARK 3 T13: -0.0374 T23: 0.0383 REMARK 3 L TENSOR REMARK 3 L11: 2.6268 L22: 6.2642 REMARK 3 L33: 1.2112 L12: 2.9778 REMARK 3 L13: -0.0360 L23: 1.0296 REMARK 3 S TENSOR REMARK 3 S11: 0.1419 S12: -0.1412 S13: -0.1575 REMARK 3 S21: 0.2366 S22: -0.1359 S23: -0.1324 REMARK 3 S31: 0.0229 S32: -0.0584 S33: -0.0518 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 112 THROUGH 126 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.8919 6.5362 33.6644 REMARK 3 T TENSOR REMARK 3 T11: 0.1005 T22: 0.0861 REMARK 3 T33: 0.0804 T12: 0.0223 REMARK 3 T13: -0.0213 T23: 0.0214 REMARK 3 L TENSOR REMARK 3 L11: 2.0561 L22: 4.2698 REMARK 3 L33: 0.6402 L12: 1.5295 REMARK 3 L13: -0.6179 L23: -0.4233 REMARK 3 S TENSOR REMARK 3 S11: 0.0359 S12: -0.0403 S13: -0.3401 REMARK 3 S21: 0.0909 S22: -0.0694 S23: -0.2418 REMARK 3 S31: -0.0037 S32: -0.0577 S33: 0.0218 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 13 THROUGH 23 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.3575 30.5058 16.4547 REMARK 3 T TENSOR REMARK 3 T11: 0.3195 T22: 0.1971 REMARK 3 T33: 0.1070 T12: -0.0788 REMARK 3 T13: 0.0280 T23: 0.0256 REMARK 3 L TENSOR REMARK 3 L11: 4.3241 L22: 0.9250 REMARK 3 L33: 1.1574 L12: -1.5551 REMARK 3 L13: -2.3381 L23: 0.8182 REMARK 3 S TENSOR REMARK 3 S11: 0.1279 S12: 0.6624 S13: 0.4013 REMARK 3 S21: -0.7758 S22: 0.2035 S23: -0.1172 REMARK 3 S31: -0.7447 S32: -0.4555 S33: -0.1992 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 24 THROUGH 30 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.7480 32.8396 25.5301 REMARK 3 T TENSOR REMARK 3 T11: 0.1530 T22: 0.1364 REMARK 3 T33: 0.1793 T12: -0.0293 REMARK 3 T13: -0.0232 T23: -0.0077 REMARK 3 L TENSOR REMARK 3 L11: 4.9493 L22: 5.0282 REMARK 3 L33: 8.3843 L12: -3.6192 REMARK 3 L13: -6.4107 L23: 4.2751 REMARK 3 S TENSOR REMARK 3 S11: 0.1044 S12: -0.2295 S13: 0.5598 REMARK 3 S21: -0.2946 S22: 0.2776 S23: -0.3741 REMARK 3 S31: -0.4601 S32: 0.3704 S33: -0.4028 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 31 THROUGH 38 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.1314 19.1714 13.9508 REMARK 3 T TENSOR REMARK 3 T11: 0.3005 T22: 0.2437 REMARK 3 T33: 0.2547 T12: -0.0114 REMARK 3 T13: 0.0558 T23: -0.0478 REMARK 3 L TENSOR REMARK 3 L11: 3.7403 L22: 2.9095 REMARK 3 L33: 6.1008 L12: 3.0007 REMARK 3 L13: 4.0281 L23: 4.2022 REMARK 3 S TENSOR REMARK 3 S11: -0.1798 S12: 0.7132 S13: -0.6352 REMARK 3 S21: -0.6525 S22: 0.4508 S23: -0.7198 REMARK 3 S31: 0.0705 S32: 0.2344 S33: -0.2319 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 39 THROUGH 48 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.9675 17.0722 15.6835 REMARK 3 T TENSOR REMARK 3 T11: 0.3041 T22: 0.2382 REMARK 3 T33: 0.1312 T12: -0.0653 REMARK 3 T13: -0.0145 T23: -0.0087 REMARK 3 L TENSOR REMARK 3 L11: 5.1412 L22: 4.1105 REMARK 3 L33: 3.0948 L12: 0.3352 REMARK 3 L13: 1.6095 L23: 1.7692 REMARK 3 S TENSOR REMARK 3 S11: 0.0673 S12: 0.5042 S13: -0.6879 REMARK 3 S21: -0.7216 S22: -0.0490 S23: -0.2081 REMARK 3 S31: 0.3894 S32: -0.3133 S33: 0.0597 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 49 THROUGH 72 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.2830 19.1523 20.1701 REMARK 3 T TENSOR REMARK 3 T11: 0.1566 T22: 0.1647 REMARK 3 T33: 0.1112 T12: -0.0149 REMARK 3 T13: -0.0542 T23: 0.0204 REMARK 3 L TENSOR REMARK 3 L11: 3.1695 L22: 2.6464 REMARK 3 L33: 3.3711 L12: 0.2165 REMARK 3 L13: 0.5608 L23: 0.4226 REMARK 3 S TENSOR REMARK 3 S11: -0.0776 S12: 0.5278 S13: -0.1636 REMARK 3 S21: -0.4733 S22: 0.0833 S23: 0.2073 REMARK 3 S31: 0.0385 S32: -0.2435 S33: -0.0367 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 73 THROUGH 88 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.6775 21.5830 28.5053 REMARK 3 T TENSOR REMARK 3 T11: 0.1277 T22: 0.1305 REMARK 3 T33: 0.1450 T12: 0.0155 REMARK 3 T13: -0.0329 T23: 0.0383 REMARK 3 L TENSOR REMARK 3 L11: 6.2765 L22: 3.5505 REMARK 3 L33: 2.6696 L12: 1.4349 REMARK 3 L13: 1.2918 L23: 0.8252 REMARK 3 S TENSOR REMARK 3 S11: -0.0644 S12: 0.0781 S13: 0.1368 REMARK 3 S21: -0.1499 S22: 0.0024 S23: 0.4612 REMARK 3 S31: 0.0143 S32: -0.3342 S33: 0.0558 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 89 THROUGH 96 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.8595 26.9921 12.2106 REMARK 3 T TENSOR REMARK 3 T11: 0.3997 T22: 0.4130 REMARK 3 T33: 0.1862 T12: 0.0605 REMARK 3 T13: -0.0924 T23: -0.0097 REMARK 3 L TENSOR REMARK 3 L11: 6.2673 L22: 1.5091 REMARK 3 L33: 5.9932 L12: 1.9433 REMARK 3 L13: -6.1010 L23: -1.5769 REMARK 3 S TENSOR REMARK 3 S11: 0.3913 S12: 0.6437 S13: -0.5755 REMARK 3 S21: -0.5641 S22: -0.3360 S23: 0.5080 REMARK 3 S31: 0.2839 S32: -0.7779 S33: -0.1471 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 97 THROUGH 126 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.4513 26.8559 28.1158 REMARK 3 T TENSOR REMARK 3 T11: 0.0905 T22: 0.0765 REMARK 3 T33: 0.0931 T12: -0.0023 REMARK 3 T13: -0.0170 T23: 0.0040 REMARK 3 L TENSOR REMARK 3 L11: 1.7422 L22: 2.7895 REMARK 3 L33: 3.9415 L12: -0.0495 REMARK 3 L13: -0.5916 L23: -0.9014 REMARK 3 S TENSOR REMARK 3 S11: 0.0444 S12: 0.0202 S13: 0.0300 REMARK 3 S21: 0.0533 S22: -0.0160 S23: 0.0594 REMARK 3 S31: -0.2177 S32: -0.0755 S33: -0.0199 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4XIN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-JAN-15. REMARK 100 THE DEPOSITION ID IS D_1000205741. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-AUG-14; 27-AUG-14 REMARK 200 TEMPERATURE (KELVIN) : 100; 100 REMARK 200 PH : 5.50 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; N REMARK 200 RADIATION SOURCE : APS; ROTATING ANODE REMARK 200 BEAMLINE : 21-ID-D; NULL REMARK 200 X-RAY GENERATOR MODEL : NULL; RIGAKU FR-E+ SUPERBRIGHT REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97624; 1.54 REMARK 200 MONOCHROMATOR : DIAMOND [111]; NULL REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-225; RIGAKU SATURN REMARK 200 944+ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27430 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.8 REMARK 200 DATA REDUNDANCY : 2.900 REMARK 200 R MERGE (I) : 0.03700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.2200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.54 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.9 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.20100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 5.690 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 28.32 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.72 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: JCSG+ WELL H9 - 0.2 M LITHIUM SULFATE, REMARK 280 25% PEG3350, 0.1 M BIS-TRIS PH 5.50; MYAVA.18632.A.B2 PS02022 AT REMARK 280 25.7MG/ML, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2140 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10270 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -21.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 HIS A 3 REMARK 465 HIS A 4 REMARK 465 HIS A 5 REMARK 465 HIS A 6 REMARK 465 HIS A 7 REMARK 465 HIS A 8 REMARK 465 SER A 9 REMARK 465 ARG A 10 REMARK 465 PRO A 11 REMARK 465 PRO A 12 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 HIS B 3 REMARK 465 HIS B 4 REMARK 465 HIS B 5 REMARK 465 HIS B 6 REMARK 465 HIS B 7 REMARK 465 HIS B 8 REMARK 465 SER B 9 REMARK 465 ARG B 10 REMARK 465 PRO B 11 REMARK 465 PRO B 12 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 14 CG CD OE1 NE2 REMARK 470 LEU A 38 CG CD1 CD2 REMARK 470 GLU A 39 CG CD OE1 OE2 REMARK 470 TRP A 40 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP A 40 CZ3 CH2 REMARK 470 ARG A 41 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 62 CG CD OE1 NE2 REMARK 470 GLN B 14 CG CD OE1 NE2 REMARK 470 LEU B 15 CG CD1 CD2 REMARK 470 GLN B 37 CG CD OE1 NE2 REMARK 470 GLU B 39 CG CD OE1 OE2 REMARK 470 TRP B 40 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP B 40 CZ3 CH2 REMARK 470 ASN B 60 CG OD1 ND2 REMARK 470 GLN B 62 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 366 O HOH B 374 2.15 REMARK 500 OE1 GLU A 114 O HOH A 295 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O GLU A 59 NE2 HIS B 31 1445 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU B 39 -115.36 50.80 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 201 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 282 O REMARK 620 2 SER B 82 O 84.7 REMARK 620 3 GLY B 84 O 88.9 95.2 REMARK 620 4 GLY B 87 O 177.7 93.9 89.5 REMARK 620 5 HOH B 352 O 87.2 88.5 174.3 94.6 REMARK 620 6 HOH B 370 O 81.0 162.8 93.9 100.6 81.4 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA B 201 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: SSGCID-MYAVA.18632.A RELATED DB: TARGETTRACK DBREF 4XIN A 9 126 UNP A0QBE0 A0QBE0_MYCA1 22 139 DBREF 4XIN B 9 126 UNP A0QBE0 A0QBE0_MYCA1 22 139 SEQADV 4XIN MET A 1 UNP A0QBE0 INITIATING METHIONINE SEQADV 4XIN ALA A 2 UNP A0QBE0 EXPRESSION TAG SEQADV 4XIN HIS A 3 UNP A0QBE0 EXPRESSION TAG SEQADV 4XIN HIS A 4 UNP A0QBE0 EXPRESSION TAG SEQADV 4XIN HIS A 5 UNP A0QBE0 EXPRESSION TAG SEQADV 4XIN HIS A 6 UNP A0QBE0 EXPRESSION TAG SEQADV 4XIN HIS A 7 UNP A0QBE0 EXPRESSION TAG SEQADV 4XIN HIS A 8 UNP A0QBE0 EXPRESSION TAG SEQADV 4XIN MET B 1 UNP A0QBE0 INITIATING METHIONINE SEQADV 4XIN ALA B 2 UNP A0QBE0 EXPRESSION TAG SEQADV 4XIN HIS B 3 UNP A0QBE0 EXPRESSION TAG SEQADV 4XIN HIS B 4 UNP A0QBE0 EXPRESSION TAG SEQADV 4XIN HIS B 5 UNP A0QBE0 EXPRESSION TAG SEQADV 4XIN HIS B 6 UNP A0QBE0 EXPRESSION TAG SEQADV 4XIN HIS B 7 UNP A0QBE0 EXPRESSION TAG SEQADV 4XIN HIS B 8 UNP A0QBE0 EXPRESSION TAG SEQRES 1 A 126 MET ALA HIS HIS HIS HIS HIS HIS SER ARG PRO PRO ALA SEQRES 2 A 126 GLN LEU SER SER THR ALA SER VAL THR VAL ASP GLY LYS SEQRES 3 A 126 ASP ARG ASN PHE HIS ILE VAL THR CYS ARG GLN LEU GLU SEQRES 4 A 126 TRP ARG ARG MET ILE ASP ILE GLY ALA ASP PHE SER GLY SEQRES 5 A 126 ALA LYS VAL ALA VAL ASP GLU ASN ALA GLN PRO PRO VAL SEQRES 6 A 126 VAL GLU SER VAL HIS ILE GLN ASN LEU SER GLY PHE SER SEQRES 7 A 126 GLY MET TYR SER ARG GLY GLY SER GLY SER ALA ASP MET SEQRES 8 A 126 SER MET THR GLY ASP LYS PHE THR ILE SER GLY THR ALA SEQRES 9 A 126 ASP GLY TYR LYS THR ASP LYS PRO GLY GLU PRO ALA THR SEQRES 10 A 126 ALA THR PHE LYS ILE VAL VAL THR CYS SEQRES 1 B 126 MET ALA HIS HIS HIS HIS HIS HIS SER ARG PRO PRO ALA SEQRES 2 B 126 GLN LEU SER SER THR ALA SER VAL THR VAL ASP GLY LYS SEQRES 3 B 126 ASP ARG ASN PHE HIS ILE VAL THR CYS ARG GLN LEU GLU SEQRES 4 B 126 TRP ARG ARG MET ILE ASP ILE GLY ALA ASP PHE SER GLY SEQRES 5 B 126 ALA LYS VAL ALA VAL ASP GLU ASN ALA GLN PRO PRO VAL SEQRES 6 B 126 VAL GLU SER VAL HIS ILE GLN ASN LEU SER GLY PHE SER SEQRES 7 B 126 GLY MET TYR SER ARG GLY GLY SER GLY SER ALA ASP MET SEQRES 8 B 126 SER MET THR GLY ASP LYS PHE THR ILE SER GLY THR ALA SEQRES 9 B 126 ASP GLY TYR LYS THR ASP LYS PRO GLY GLU PRO ALA THR SEQRES 10 B 126 ALA THR PHE LYS ILE VAL VAL THR CYS HET NA B 201 1 HETNAM NA SODIUM ION FORMUL 3 NA NA 1+ FORMUL 4 HOH *185(H2 O) SHEET 1 AA1 9 LYS A 26 PHE A 30 0 SHEET 2 AA1 9 THR A 18 VAL A 23 -1 N VAL A 21 O ARG A 28 SHEET 3 AA1 9 LYS A 111 THR A 125 -1 O VAL A 123 N SER A 20 SHEET 4 AA1 9 LYS A 97 LYS A 108 -1 N ILE A 100 O ILE A 122 SHEET 5 AA1 9 PHE A 77 SER A 82 -1 N MET A 80 O ASP A 105 SHEET 6 AA1 9 VAL A 65 LEU A 74 -1 N VAL A 69 O TYR A 81 SHEET 7 AA1 9 GLY A 52 ASP A 58 -1 N ASP A 58 O VAL A 65 SHEET 8 AA1 9 ARG A 41 GLY A 47 -1 N ILE A 46 O ALA A 53 SHEET 9 AA1 9 VAL A 33 LEU A 38 -1 N THR A 34 O ASP A 45 SHEET 1 AA2 5 LYS A 26 PHE A 30 0 SHEET 2 AA2 5 THR A 18 VAL A 23 -1 N VAL A 21 O ARG A 28 SHEET 3 AA2 5 LYS A 111 THR A 125 -1 O VAL A 123 N SER A 20 SHEET 4 AA2 5 LYS A 97 LYS A 108 -1 N ILE A 100 O ILE A 122 SHEET 5 AA2 5 SER A 88 THR A 94 -1 N ASP A 90 O SER A 101 SHEET 1 AA3 9 LYS B 26 PHE B 30 0 SHEET 2 AA3 9 THR B 18 VAL B 23 -1 N ALA B 19 O PHE B 30 SHEET 3 AA3 9 PRO B 115 THR B 125 -1 O LYS B 121 N THR B 22 SHEET 4 AA3 9 LYS B 97 LYS B 108 -1 N GLY B 106 O ALA B 116 SHEET 5 AA3 9 PHE B 77 SER B 82 -1 N SER B 78 O TYR B 107 SHEET 6 AA3 9 VAL B 65 LEU B 74 -1 N ILE B 71 O GLY B 79 SHEET 7 AA3 9 SER B 51 ASP B 58 -1 N ALA B 56 O GLU B 67 SHEET 8 AA3 9 ARG B 41 ALA B 48 -1 N ILE B 46 O ALA B 53 SHEET 9 AA3 9 VAL B 33 LEU B 38 -1 N THR B 34 O ASP B 45 SHEET 1 AA4 5 LYS B 26 PHE B 30 0 SHEET 2 AA4 5 THR B 18 VAL B 23 -1 N ALA B 19 O PHE B 30 SHEET 3 AA4 5 PRO B 115 THR B 125 -1 O LYS B 121 N THR B 22 SHEET 4 AA4 5 LYS B 97 LYS B 108 -1 N GLY B 106 O ALA B 116 SHEET 5 AA4 5 ALA B 89 THR B 94 -1 N ASP B 90 O SER B 101 SSBOND 1 CYS A 35 CYS A 126 1555 1555 2.01 SSBOND 2 CYS B 35 CYS B 126 1555 1555 2.02 LINK O HOH A 282 NA NA B 201 1555 1555 2.43 LINK O SER B 82 NA NA B 201 1555 1555 2.32 LINK O GLY B 84 NA NA B 201 1555 1555 2.27 LINK O GLY B 87 NA NA B 201 1555 1555 2.79 LINK NA NA B 201 O HOH B 352 1555 1555 2.32 LINK NA NA B 201 O HOH B 370 1555 1555 2.52 CISPEP 1 GLU A 39 TRP A 40 0 3.54 CISPEP 2 GLN A 62 PRO A 63 0 -2.59 CISPEP 3 GLN B 62 PRO B 63 0 -0.52 SITE 1 AC1 6 HOH A 282 SER B 82 GLY B 84 GLY B 87 SITE 2 AC1 6 HOH B 352 HOH B 370 CRYST1 32.030 37.630 41.960 110.12 95.97 97.08 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.031221 0.003877 0.005003 0.00000 SCALE2 0.000000 0.026779 0.010381 0.00000 SCALE3 0.000000 0.000000 0.025700 0.00000