HEADER HYDROLASE 13-JAN-15 4XLG TITLE C. GLABRATA SLX1 IN COMPLEX WITH SLX4CCD. COMPND MOL_ID: 1; COMPND 2 MOLECULE: STRUCTURE-SPECIFIC ENDONUCLEASE SUBUNIT SLX4; COMPND 3 CHAIN: B; COMPND 4 FRAGMENT: UNP RESIDUES 647-726; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: STRUCTURE-SPECIFIC ENDONUCLEASE SUBUNIT SLX1; COMPND 8 CHAIN: A; COMPND 9 EC: 3.1.-.-; COMPND 10 ENGINEERED: YES; COMPND 11 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CANDIDA GLABRATA (STRAIN ATCC 2001 / CBS 138 / SOURCE 3 JCM 3761 / NBRC 0622 / NRRL Y-65); SOURCE 4 ORGANISM_TAXID: 284593; SOURCE 5 GENE: SLX4, CAGL0M04389G; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: CANDIDA GLABRATA (STRAIN ATCC 2001 / CBS 138 / SOURCE 10 JCM 3761 / NBRC 0622 / NRRL Y-65); SOURCE 11 ORGANISM_TAXID: 284593; SOURCE 12 GENE: SLX1, CAGL0K06941G; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS NUCLEASE, DNA REPAIR, GIY-YIG, HOMOGOLOUS RECOMBINATION, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR V.GAUR,H.D.M.WYATT,W.KOMOROWSKA,R.H.SZCZEPANOWSKI,D.DE SANCTIS, AUTHOR 2 K.M.GORECKA,S.C.WEST,M.NOWOTNY REVDAT 3 10-JAN-24 4XLG 1 REMARK REVDAT 2 20-MAY-15 4XLG 1 JRNL REVDAT 1 25-MAR-15 4XLG 0 JRNL AUTH V.GAUR,H.D.WYATT,W.KOMOROWSKA,R.H.SZCZEPANOWSKI, JRNL AUTH 2 D.DE SANCTIS,K.M.GORECKA,S.C.WEST,M.NOWOTNY JRNL TITL STRUCTURAL AND MECHANISTIC ANALYSIS OF THE SLX1-SLX4 JRNL TITL 2 ENDONUCLEASE. JRNL REF CELL REP V. 10 1467 2015 JRNL REFN ESSN 2211-1247 JRNL PMID 25753413 JRNL DOI 10.1016/J.CELREP.2015.02.019 REMARK 2 REMARK 2 RESOLUTION. 1.78 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.9_1692) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.78 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.00 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 57362 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.159 REMARK 3 R VALUE (WORKING SET) : 0.158 REMARK 3 FREE R VALUE : 0.182 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.910 REMARK 3 FREE R VALUE TEST SET COUNT : 2818 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 44.4616 - 4.8298 1.00 2868 110 0.1833 0.1932 REMARK 3 2 4.8298 - 3.8342 1.00 2759 152 0.1392 0.1527 REMARK 3 3 3.8342 - 3.3498 1.00 2762 120 0.1457 0.1536 REMARK 3 4 3.3498 - 3.0436 1.00 2729 164 0.1528 0.1744 REMARK 3 5 3.0436 - 2.8255 1.00 2734 135 0.1541 0.2038 REMARK 3 6 2.8255 - 2.6589 1.00 2719 154 0.1444 0.2058 REMARK 3 7 2.6589 - 2.5257 1.00 2700 164 0.1501 0.1628 REMARK 3 8 2.5257 - 2.4158 1.00 2732 131 0.1530 0.1917 REMARK 3 9 2.4158 - 2.3228 1.00 2704 157 0.1481 0.1719 REMARK 3 10 2.3228 - 2.2427 1.00 2733 132 0.1386 0.1535 REMARK 3 11 2.2427 - 2.1725 1.00 2739 136 0.1438 0.1774 REMARK 3 12 2.1725 - 2.1104 1.00 2683 149 0.1489 0.1939 REMARK 3 13 2.1104 - 2.0549 1.00 2722 122 0.1531 0.2106 REMARK 3 14 2.0549 - 2.0047 1.00 2729 154 0.1655 0.1907 REMARK 3 15 2.0047 - 1.9592 1.00 2693 135 0.1733 0.2123 REMARK 3 16 1.9592 - 1.9175 1.00 2711 159 0.1893 0.2372 REMARK 3 17 1.9175 - 1.8791 1.00 2712 124 0.2018 0.2271 REMARK 3 18 1.8791 - 1.8437 1.00 2737 112 0.2155 0.2992 REMARK 3 19 1.8437 - 1.8107 1.00 2664 170 0.2212 0.2530 REMARK 3 20 1.8107 - 1.7800 1.00 2714 138 0.2342 0.2431 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.160 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.070 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.018 2765 REMARK 3 ANGLE : 1.461 3754 REMARK 3 CHIRALITY : 0.095 427 REMARK 3 PLANARITY : 0.008 472 REMARK 3 DIHEDRAL : 13.657 1028 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 655 THROUGH 721 ) REMARK 3 ORIGIN FOR THE GROUP (A): -48.0103 36.5673 -1.8140 REMARK 3 T TENSOR REMARK 3 T11: 0.5184 T22: 0.3024 REMARK 3 T33: 0.3438 T12: -0.1706 REMARK 3 T13: 0.0292 T23: 0.0061 REMARK 3 L TENSOR REMARK 3 L11: 1.5306 L22: 3.3613 REMARK 3 L33: 0.3103 L12: 1.2470 REMARK 3 L13: -0.5515 L23: -0.2450 REMARK 3 S TENSOR REMARK 3 S11: 0.1738 S12: 0.0489 S13: 0.2703 REMARK 3 S21: 0.1587 S22: 0.0305 S23: 0.2288 REMARK 3 S31: -0.5273 S32: 0.2287 S33: 0.0803 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 3 THROUGH 134 ) REMARK 3 ORIGIN FOR THE GROUP (A): -60.6224 11.7475 -9.8215 REMARK 3 T TENSOR REMARK 3 T11: 0.2917 T22: 0.1409 REMARK 3 T33: 0.1963 T12: -0.0134 REMARK 3 T13: 0.0037 T23: 0.0143 REMARK 3 L TENSOR REMARK 3 L11: 1.5816 L22: 2.2602 REMARK 3 L33: 1.8902 L12: 0.8310 REMARK 3 L13: 0.6600 L23: 0.8949 REMARK 3 S TENSOR REMARK 3 S11: -0.0661 S12: 0.1117 S13: 0.0663 REMARK 3 S21: -0.2266 S22: 0.0197 S23: 0.0105 REMARK 3 S31: -0.2495 S32: 0.1223 S33: 0.0232 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 135 THROUGH 175 ) REMARK 3 ORIGIN FOR THE GROUP (A): -52.4653 0.5191 -15.9600 REMARK 3 T TENSOR REMARK 3 T11: 0.3111 T22: 0.2930 REMARK 3 T33: 0.3311 T12: 0.0338 REMARK 3 T13: 0.0625 T23: -0.0676 REMARK 3 L TENSOR REMARK 3 L11: 2.8765 L22: 2.5031 REMARK 3 L33: 2.2676 L12: 1.5436 REMARK 3 L13: 1.2129 L23: 0.4703 REMARK 3 S TENSOR REMARK 3 S11: -0.1287 S12: 0.3491 S13: -0.4052 REMARK 3 S21: -0.2928 S22: 0.2585 S23: -0.5473 REMARK 3 S31: -0.0169 S32: 0.4950 S33: -0.1223 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 176 THROUGH 214 ) REMARK 3 ORIGIN FOR THE GROUP (A): -58.7637 0.9974 3.0393 REMARK 3 T TENSOR REMARK 3 T11: 0.3380 T22: 0.1378 REMARK 3 T33: 0.2297 T12: 0.0104 REMARK 3 T13: -0.0368 T23: 0.0342 REMARK 3 L TENSOR REMARK 3 L11: 2.6213 L22: 1.9801 REMARK 3 L33: 3.5687 L12: 1.7590 REMARK 3 L13: 1.9311 L23: 1.8051 REMARK 3 S TENSOR REMARK 3 S11: 0.4119 S12: -0.2595 S13: -0.2696 REMARK 3 S21: 0.4673 S22: -0.1555 S23: -0.2783 REMARK 3 S31: 0.5333 S32: -0.0658 S33: -0.1297 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 215 THROUGH 300 ) REMARK 3 ORIGIN FOR THE GROUP (A): -40.8200 18.3247 11.7187 REMARK 3 T TENSOR REMARK 3 T11: 0.3993 T22: 0.4813 REMARK 3 T33: 0.3661 T12: -0.1075 REMARK 3 T13: -0.0740 T23: 0.0639 REMARK 3 L TENSOR REMARK 3 L11: 2.6804 L22: 2.3993 REMARK 3 L33: 2.8958 L12: 0.4955 REMARK 3 L13: 0.6717 L23: -0.3128 REMARK 3 S TENSOR REMARK 3 S11: 0.1922 S12: -0.4910 S13: -0.1506 REMARK 3 S21: 0.4887 S22: -0.3115 S23: -0.3909 REMARK 3 S31: -0.0275 S32: 0.7894 S33: -0.1400 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4XLG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 13-JAN-15. REMARK 100 THE DEPOSITION ID IS D_1000205849. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-OCT-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97626 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 57362 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.780 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 10.20 REMARK 200 R MERGE (I) : 0.08100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.78 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.84 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 10.40 REMARK 200 R MERGE FOR SHELL (I) : 1.25000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4XM5 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.68 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M MAGNESIUM CHLORIDE HEXAHYDRATE, REMARK 280 0.1 M BIS TRIS (PH 6.5), 25% (V/V) PEG 3350, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/2 REMARK 290 6555 X-Y,X,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 28.35500 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 28.35500 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 28.35500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2510 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15830 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -35.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER B 647 REMARK 465 ASN B 648 REMARK 465 GLN B 649 REMARK 465 LYS B 650 REMARK 465 LYS B 651 REMARK 465 VAL B 652 REMARK 465 GLY B 653 REMARK 465 VAL B 654 REMARK 465 ASN B 722 REMARK 465 ASN B 723 REMARK 465 LEU B 724 REMARK 465 LYS B 725 REMARK 465 ASP B 726 REMARK 465 MET A 1 REMARK 465 GLU A 2 REMARK 465 GLY A 47 REMARK 465 GLY A 48 REMARK 465 ALA A 49 REMARK 465 TYR A 50 REMARK 465 ARG A 51 REMARK 465 TYR A 86 REMARK 465 GLN A 87 REMARK 465 LYS A 92 REMARK 465 SER A 93 REMARK 465 GLN A 94 REMARK 465 ASP A 95 REMARK 465 ARG A 96 REMARK 465 VAL A 97 REMARK 465 VAL A 98 REMARK 465 LYS A 99 REMARK 465 THR A 100 REMARK 465 ARG A 101 REMARK 465 LYS A 102 REMARK 465 GLY A 103 REMARK 465 GLY A 104 REMARK 465 ARG A 105 REMARK 465 GLN A 150 REMARK 465 THR A 151 REMARK 465 GLN A 152 REMARK 465 GLU A 153 REMARK 465 SER A 154 REMARK 465 ILE A 155 REMARK 465 ASP A 156 REMARK 465 ASN A 157 REMARK 465 LEU A 230 REMARK 465 SER A 231 REMARK 465 GLY A 232 REMARK 465 ASN A 263 REMARK 465 THR A 264 REMARK 465 GLU A 265 REMARK 465 LEU A 266 REMARK 465 PRO A 267 REMARK 465 LYS A 268 REMARK 465 ASP A 301 REMARK 465 ASN A 302 REMARK 465 THR A 303 REMARK 465 THR A 304 REMARK 465 ALA A 305 REMARK 465 ASP A 306 REMARK 465 ASP A 307 REMARK 465 LYS A 308 REMARK 465 LYS A 309 REMARK 465 LYS A 310 REMARK 465 THR A 311 REMARK 465 ILE A 312 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU B 662 CG CD OE1 OE2 REMARK 470 GLU A 3 CG CD OE1 OE2 REMARK 470 ARG A 46 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 53 CG CD CE NZ REMARK 470 HIS A 84 CG ND1 CD2 CE1 NE2 REMARK 470 LYS A 119 CD CE NZ REMARK 470 ARG A 124 CZ NH1 NH2 REMARK 470 LYS A 145 CE NZ REMARK 470 GLU A 170 OE1 OE2 REMARK 470 GLU A 184 CD OE1 OE2 REMARK 470 GLU A 210 CG CD OE1 OE2 REMARK 470 LYS A 227 CG CD CE NZ REMARK 470 HIS A 228 CG ND1 CD2 CE1 NE2 REMARK 470 ASN A 233 CG OD1 ND2 REMARK 470 GLU A 236 CG CD OE1 OE2 REMARK 470 GLU A 269 CG CD OE1 OE2 REMARK 470 LYS A 278 CD CE NZ REMARK 470 LYS A 281 CE NZ REMARK 470 TYR A 283 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS A 300 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 627 O HOH A 679 2.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 169 -120.86 -120.67 REMARK 500 ASN A 223 -0.10 74.77 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 219 SG REMARK 620 2 CYS A 222 SG 106.3 REMARK 620 3 HIS A 252 ND1 111.3 94.1 REMARK 620 4 CYS A 255 SG 112.9 116.9 113.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 402 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 242 SG REMARK 620 2 CYS A 247 SG 111.0 REMARK 620 3 CYS A 279 SG 108.0 105.9 REMARK 620 4 CYS A 282 SG 105.3 117.4 108.8 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 404 DBREF 4XLG B 647 726 UNP Q6FJQ6 SLX4_CANGA 647 726 DBREF 4XLG A 1 312 UNP Q6FML9 SLX1_CANGA 1 312 SEQADV 4XLG GLN A 79 UNP Q6FML9 GLU 79 ENGINEERED MUTATION SEQRES 1 B 80 SER ASN GLN LYS LYS VAL GLY VAL THR SER LYS SER GLU SEQRES 2 B 80 VAL PHE GLU PHE LEU THR HIS LEU VAL LYS GLN GLU PRO SEQRES 3 B 80 ASP LEU LEU THR ARG ILE TYR CYS PHE GLN PRO ILE THR SEQRES 4 B 80 MET ASN ASP LEU ILE ASN LYS LEU ARG ASN LYS ASP SER SEQRES 5 B 80 PHE VAL ASP LEU ILE ASP ASP GLY THR ILE ARG GLU TRP SEQRES 6 B 80 THR ASP LYS LEU GLY ILE CYS ILE ARG SER ASN ASN LEU SEQRES 7 B 80 LYS ASP SEQRES 1 A 312 MET GLU GLU PHE GLN GLN ILE PRO ASP PHE TYR GLY CYS SEQRES 2 A 312 TYR LEU LEU GLN SER ILE SER LYS ARG GLN SER PHE TYR SEQRES 3 A 312 ILE GLY SER THR PRO ASN PRO VAL ARG ARG LEU ARG GLN SEQRES 4 A 312 HIS ASN GLY SER LEU SER ARG GLY GLY ALA TYR ARG THR SEQRES 5 A 312 LYS ARG ASP GLY THR ARG PRO TRP GLU MET VAL ALA ILE SEQRES 6 A 312 VAL TYR GLY PHE PRO SER ARG ILE ALA ALA LEU GLN PHE SEQRES 7 A 312 GLN HIS ALA TRP GLN HIS GLY TYR GLN THR ARG TYR ILE SEQRES 8 A 312 LYS SER GLN ASP ARG VAL VAL LYS THR ARG LYS GLY GLY SEQRES 9 A 312 ARG SER ILE HIS HIS LYS LEU ALA MET ILE THR SER LEU SEQRES 10 A 312 LEU LYS ASN GLU TYR PHE ARG TYR MET ASP LEU THR LEU SEQRES 11 A 312 HIS PHE PHE ASN GLN LYS VAL GLU GLU ILE TRP LYS ASN SEQRES 12 A 312 ASP LYS PHE ASN VAL SER GLN THR GLN GLU SER ILE ASP SEQRES 13 A 312 ASN ASN TYR THR VAL SER LEU SER GLN ASP ALA LEU THR SEQRES 14 A 312 GLU ILE ASN ASN ASP THR ILE ASP ASP ILE MET ASP VAL SEQRES 15 A 312 ASN GLU LYS ASN MET GLU LEU VAL GLN ASN LEU TYR SER SEQRES 16 A 312 THR THR LEU ALA GLU LYS THR LYS THR LEU LEU LEU TYR SEQRES 17 A 312 LYS GLU LYS ILE ASP THR GLY ILE ASN THR CYS GLN PHE SEQRES 18 A 312 CYS ASN LYS ILE ILE LYS HIS ASN LEU SER GLY ASN ILE SEQRES 19 A 312 SER GLU ASN LEU PHE ALA PHE CYS ARG ASP THR SER CYS SEQRES 20 A 312 THR PHE VAL SER HIS LEU ALA CYS ALA TYR ARG TYR PHE SEQRES 21 A 312 MET SER ASN THR GLU LEU PRO LYS GLU ASP THR ILE ILE SEQRES 22 A 312 PRO GLN SER PRO LYS CYS PRO LYS CYS TYR THR LEU LEU SEQRES 23 A 312 LYS TRP CYS ASP VAL ILE TYR TYR SER ILE LYS LEU ASN SEQRES 24 A 312 LYS ASP ASN THR THR ALA ASP ASP LYS LYS LYS THR ILE HET ZN A 401 1 HET ZN A 402 1 HET CL A 403 1 HET CL A 404 1 HETNAM ZN ZINC ION HETNAM CL CHLORIDE ION FORMUL 3 ZN 2(ZN 2+) FORMUL 5 CL 2(CL 1-) FORMUL 7 HOH *302(H2 O) HELIX 1 AA1 SER B 656 GLN B 670 1 15 HELIX 2 AA2 GLU B 671 CYS B 680 1 10 HELIX 3 AA3 MET B 686 ASP B 697 1 12 HELIX 4 AA4 SER B 698 ILE B 703 5 6 HELIX 5 AA5 ASP B 704 GLY B 716 1 13 HELIX 6 AA6 ASN A 32 GLY A 42 1 11 HELIX 7 AA7 SER A 71 GLY A 85 1 15 HELIX 8 AA8 ILE A 107 LYS A 119 1 13 HELIX 9 AA9 ASN A 120 TYR A 125 1 6 HELIX 10 AB1 GLN A 135 ASP A 144 1 10 HELIX 11 AB2 THR A 175 THR A 214 1 40 HELIX 12 AB3 ILE A 234 LEU A 238 1 5 HELIX 13 AB4 LEU A 253 MET A 261 1 9 HELIX 14 AB5 LYS A 287 LYS A 300 1 14 SHEET 1 AA1 2 ILE B 684 THR B 685 0 SHEET 2 AA1 2 ILE B 719 ARG B 720 1 O ARG B 720 N ILE B 684 SHEET 1 AA2 5 PHE A 25 THR A 30 0 SHEET 2 AA2 5 GLY A 12 SER A 18 -1 N LEU A 16 O TYR A 26 SHEET 3 AA2 5 TRP A 60 TYR A 67 -1 O VAL A 66 N CYS A 13 SHEET 4 AA2 5 THR A 129 ASN A 134 -1 O HIS A 131 N ILE A 65 SHEET 5 AA2 5 THR A 160 LEU A 168 1 O THR A 160 N LEU A 130 SHEET 1 AA3 2 PHE A 239 PHE A 241 0 SHEET 2 AA3 2 VAL A 250 HIS A 252 -1 O SER A 251 N ALA A 240 LINK SG CYS A 219 ZN ZN A 401 1555 1555 2.29 LINK SG CYS A 222 ZN ZN A 401 1555 1555 2.37 LINK SG CYS A 242 ZN ZN A 402 1555 1555 2.44 LINK SG CYS A 247 ZN ZN A 402 1555 1555 2.44 LINK ND1 HIS A 252 ZN ZN A 401 1555 1555 2.21 LINK SG CYS A 255 ZN ZN A 401 1555 1555 2.42 LINK SG CYS A 279 ZN ZN A 402 1555 1555 2.42 LINK SG CYS A 282 ZN ZN A 402 1555 1555 2.48 CISPEP 1 ARG A 58 PRO A 59 0 0.63 SITE 1 AC1 4 CYS A 219 CYS A 222 HIS A 252 CYS A 255 SITE 1 AC2 4 CYS A 242 CYS A 247 CYS A 279 CYS A 282 SITE 1 AC3 5 ARG A 54 ASP A 55 THR A 57 ARG A 58 SITE 2 AC3 5 HOH A 601 SITE 1 AC4 2 ARG A 38 ASN A 173 CRYST1 135.790 135.790 56.710 90.00 90.00 120.00 P 63 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007364 0.004252 0.000000 0.00000 SCALE2 0.000000 0.008504 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017634 0.00000