HEADER CELL ADHESION 16-JAN-15 4XOC TITLE CRYSTAL STRUCTURE OF THE FIMH LECTIN DOMAIN FROM E.COLI F18 IN COMPLEX TITLE 2 WITH HEPTYL ALPHA-D-MANNOPYRANNOSIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: FIMH PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 25-183; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI O6:K15:H31; SOURCE 3 ORGANISM_TAXID: 362663; SOURCE 4 STRAIN: F18; SOURCE 5 GENE: ECP_4655; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: HM125 KEYWDS TYPE I PILUS, CATCH-BOND, CELL ADHESION, LECTIN, UPEC, BACTERIAL KEYWDS 2 ADHESIN, UTI, MANNOSE, ISOMERASE EXPDTA X-RAY DIFFRACTION AUTHOR R.P.JAKOB,M.M.SAUER,G.NAVARRA,B.ERNST,R.GLOCKSHUBER,T.MAIER REVDAT 5 10-JAN-24 4XOC 1 HETSYN REVDAT 4 29-JUL-20 4XOC 1 COMPND REMARK HETNAM SITE REVDAT 4 2 1 ATOM REVDAT 3 13-SEP-17 4XOC 1 REMARK SITE ATOM REVDAT 2 16-MAR-16 4XOC 1 JRNL REVDAT 1 27-JAN-16 4XOC 0 JRNL AUTH M.M.SAUER,R.P.JAKOB,J.ERAS,S.BADAY,D.ERIS,G.NAVARRA, JRNL AUTH 2 S.BERNECHE,B.ERNST,T.MAIER,R.GLOCKSHUBER JRNL TITL CATCH-BOND MECHANISM OF THE BACTERIAL ADHESIN FIMH. JRNL REF NAT COMMUN V. 7 10738 2016 JRNL REFN ESSN 2041-1723 JRNL PMID 26948702 JRNL DOI 10.1038/NCOMMS10738 REMARK 2 REMARK 2 RESOLUTION. 1.42 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.4_1496) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.42 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 54.81 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 3 NUMBER OF REFLECTIONS : 66393 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.150 REMARK 3 R VALUE (WORKING SET) : 0.148 REMARK 3 FREE R VALUE : 0.175 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3319 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 54.8464 - 4.0956 1.00 2895 152 0.1549 0.1706 REMARK 3 2 4.0956 - 3.2509 1.00 2767 146 0.1389 0.1558 REMARK 3 3 3.2509 - 2.8400 1.00 2697 142 0.1384 0.1817 REMARK 3 4 2.8400 - 2.5804 1.00 2672 140 0.1438 0.1764 REMARK 3 5 2.5804 - 2.3954 1.00 2702 142 0.1365 0.1622 REMARK 3 6 2.3954 - 2.2542 1.00 2682 142 0.1316 0.1738 REMARK 3 7 2.2542 - 2.1413 1.00 2663 140 0.1238 0.1428 REMARK 3 8 2.1413 - 2.0481 1.00 2630 138 0.1301 0.1628 REMARK 3 9 2.0481 - 1.9692 1.00 2668 141 0.1280 0.1411 REMARK 3 10 1.9692 - 1.9013 1.00 2603 137 0.1301 0.1480 REMARK 3 11 1.9013 - 1.8418 0.99 2662 140 0.1394 0.1778 REMARK 3 12 1.8418 - 1.7892 1.00 2619 137 0.1459 0.1661 REMARK 3 13 1.7892 - 1.7421 0.98 2603 138 0.1454 0.1837 REMARK 3 14 1.7421 - 1.6996 1.00 2627 138 0.1569 0.1693 REMARK 3 15 1.6996 - 1.6609 0.99 2572 135 0.1609 0.1993 REMARK 3 16 1.6609 - 1.6256 0.99 2648 139 0.1670 0.1871 REMARK 3 17 1.6256 - 1.5930 1.00 2599 137 0.1736 0.2017 REMARK 3 18 1.5930 - 1.5630 0.98 2550 134 0.1737 0.2364 REMARK 3 19 1.5630 - 1.5351 0.99 2627 139 0.1787 0.2244 REMARK 3 20 1.5351 - 1.5090 1.00 2587 136 0.1955 0.2167 REMARK 3 21 1.5090 - 1.4847 0.99 2567 135 0.2111 0.2141 REMARK 3 22 1.4847 - 1.4619 0.95 2514 132 0.2207 0.2278 REMARK 3 23 1.4619 - 1.4404 0.95 2488 131 0.2308 0.2494 REMARK 3 24 1.4404 - 1.4201 0.94 2432 128 0.2591 0.2711 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.130 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 16.170 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.015 2554 REMARK 3 ANGLE : 1.615 3513 REMARK 3 CHIRALITY : 0.077 415 REMARK 3 PLANARITY : 0.009 450 REMARK 3 DIHEDRAL : 11.214 882 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 15 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 15 ) REMARK 3 ORIGIN FOR THE GROUP (A): -49.9243 -14.1460 -0.8029 REMARK 3 T TENSOR REMARK 3 T11: 0.1395 T22: 0.0910 REMARK 3 T33: 0.0951 T12: 0.0114 REMARK 3 T13: 0.0380 T23: 0.0171 REMARK 3 L TENSOR REMARK 3 L11: 3.2627 L22: 4.9390 REMARK 3 L33: 3.9311 L12: -1.5264 REMARK 3 L13: 1.2433 L23: -0.3543 REMARK 3 S TENSOR REMARK 3 S11: 0.1149 S12: 0.2060 S13: 0.0340 REMARK 3 S21: -0.4521 S22: -0.1659 S23: -0.3803 REMARK 3 S31: 0.1388 S32: 0.2561 S33: 0.0262 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 16 THROUGH 40 ) REMARK 3 ORIGIN FOR THE GROUP (A): -48.9664 -32.5358 5.1807 REMARK 3 T TENSOR REMARK 3 T11: 0.0842 T22: 0.0985 REMARK 3 T33: 0.0735 T12: 0.0059 REMARK 3 T13: -0.0067 T23: -0.0013 REMARK 3 L TENSOR REMARK 3 L11: 0.3727 L22: 0.7910 REMARK 3 L33: 0.3849 L12: -0.3519 REMARK 3 L13: -0.0777 L23: 0.1089 REMARK 3 S TENSOR REMARK 3 S11: 0.0004 S12: 0.0139 S13: 0.0284 REMARK 3 S21: -0.0631 S22: -0.0122 S23: 0.0214 REMARK 3 S31: 0.0460 S32: 0.0159 S33: 0.0090 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 41 THROUGH 53 ) REMARK 3 ORIGIN FOR THE GROUP (A): -52.0099 -7.6099 7.2562 REMARK 3 T TENSOR REMARK 3 T11: 0.0942 T22: 0.0812 REMARK 3 T33: 0.0865 T12: -0.0023 REMARK 3 T13: -0.0059 T23: -0.0008 REMARK 3 L TENSOR REMARK 3 L11: 1.7978 L22: 4.9136 REMARK 3 L33: 0.9711 L12: -2.3563 REMARK 3 L13: -0.5788 L23: 0.5941 REMARK 3 S TENSOR REMARK 3 S11: -0.0451 S12: -0.0336 S13: 0.0595 REMARK 3 S21: 0.1114 S22: 0.0299 S23: -0.1123 REMARK 3 S31: -0.0516 S32: 0.0712 S33: -0.0025 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 54 THROUGH 77 ) REMARK 3 ORIGIN FOR THE GROUP (A): -59.7477 -28.6723 5.9461 REMARK 3 T TENSOR REMARK 3 T11: 0.0645 T22: 0.0955 REMARK 3 T33: 0.1144 T12: -0.0054 REMARK 3 T13: -0.0101 T23: 0.0065 REMARK 3 L TENSOR REMARK 3 L11: 0.1687 L22: 4.0812 REMARK 3 L33: 0.9684 L12: -0.5337 REMARK 3 L13: -0.2025 L23: 1.5239 REMARK 3 S TENSOR REMARK 3 S11: -0.0114 S12: 0.0233 S13: -0.0762 REMARK 3 S21: -0.1452 S22: -0.0253 S23: 0.2488 REMARK 3 S31: -0.0312 S32: -0.0635 S33: 0.0481 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 78 THROUGH 95 ) REMARK 3 ORIGIN FOR THE GROUP (A): -61.5809 -22.8618 12.3134 REMARK 3 T TENSOR REMARK 3 T11: 0.0941 T22: 0.0882 REMARK 3 T33: 0.1097 T12: 0.0032 REMARK 3 T13: 0.0101 T23: 0.0094 REMARK 3 L TENSOR REMARK 3 L11: 1.5228 L22: 2.2484 REMARK 3 L33: 0.8785 L12: 1.0572 REMARK 3 L13: 0.2660 L23: -0.3607 REMARK 3 S TENSOR REMARK 3 S11: 0.0278 S12: -0.0683 S13: -0.0152 REMARK 3 S21: 0.1879 S22: 0.0297 S23: 0.1861 REMARK 3 S31: 0.0092 S32: -0.0626 S33: -0.0491 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 96 THROUGH 111 ) REMARK 3 ORIGIN FOR THE GROUP (A): -51.7527 -21.2490 10.2887 REMARK 3 T TENSOR REMARK 3 T11: 0.0803 T22: 0.0931 REMARK 3 T33: 0.0852 T12: 0.0032 REMARK 3 T13: -0.0032 T23: 0.0029 REMARK 3 L TENSOR REMARK 3 L11: 0.8803 L22: 5.5850 REMARK 3 L33: 0.5187 L12: 0.4317 REMARK 3 L13: 0.2049 L23: 0.1577 REMARK 3 S TENSOR REMARK 3 S11: -0.0157 S12: -0.0300 S13: 0.0289 REMARK 3 S21: 0.1134 S22: -0.0488 S23: -0.2823 REMARK 3 S31: -0.0776 S32: -0.0047 S33: 0.0686 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 112 THROUGH 124 ) REMARK 3 ORIGIN FOR THE GROUP (A): -52.8538 -43.9188 0.6111 REMARK 3 T TENSOR REMARK 3 T11: 0.1304 T22: 0.1123 REMARK 3 T33: 0.1055 T12: -0.0266 REMARK 3 T13: -0.0098 T23: -0.0177 REMARK 3 L TENSOR REMARK 3 L11: 3.6183 L22: 1.4515 REMARK 3 L33: 2.6563 L12: -1.1242 REMARK 3 L13: -1.5831 L23: 0.8137 REMARK 3 S TENSOR REMARK 3 S11: -0.2255 S12: 0.1371 S13: -0.2935 REMARK 3 S21: -0.1823 S22: 0.1574 S23: 0.2939 REMARK 3 S31: 0.5508 S32: -0.2827 S33: 0.1024 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 125 THROUGH 158 ) REMARK 3 ORIGIN FOR THE GROUP (A): -56.8040 -22.4400 1.7465 REMARK 3 T TENSOR REMARK 3 T11: 0.0922 T22: 0.0768 REMARK 3 T33: 0.0630 T12: 0.0009 REMARK 3 T13: -0.0122 T23: 0.0065 REMARK 3 L TENSOR REMARK 3 L11: 0.6934 L22: 2.9406 REMARK 3 L33: 0.2972 L12: -1.2567 REMARK 3 L13: -0.1897 L23: 0.4810 REMARK 3 S TENSOR REMARK 3 S11: 0.0251 S12: 0.0293 S13: -0.0516 REMARK 3 S21: -0.0800 S22: -0.0367 S23: 0.1974 REMARK 3 S31: -0.0220 S32: -0.0242 S33: 0.0039 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1 THROUGH 15 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.6865 -22.8734 12.4597 REMARK 3 T TENSOR REMARK 3 T11: 0.1383 T22: 0.1383 REMARK 3 T33: 0.2037 T12: 0.0117 REMARK 3 T13: -0.0056 T23: 0.0191 REMARK 3 L TENSOR REMARK 3 L11: 5.2833 L22: 3.0044 REMARK 3 L33: 4.3237 L12: 0.8059 REMARK 3 L13: -2.6171 L23: 0.4485 REMARK 3 S TENSOR REMARK 3 S11: -0.1744 S12: -0.3331 S13: -0.4048 REMARK 3 S21: 0.1734 S22: -0.0069 S23: -0.3540 REMARK 3 S31: 0.3637 S32: 0.2802 S33: 0.1995 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 16 THROUGH 40 ) REMARK 3 ORIGIN FOR THE GROUP (A): -28.8743 -28.1186 16.4659 REMARK 3 T TENSOR REMARK 3 T11: 0.1124 T22: 0.1275 REMARK 3 T33: 0.1144 T12: 0.0025 REMARK 3 T13: -0.0053 T23: 0.0002 REMARK 3 L TENSOR REMARK 3 L11: 2.3291 L22: 0.8060 REMARK 3 L33: 0.2890 L12: 1.2342 REMARK 3 L13: -0.3089 L23: -0.2522 REMARK 3 S TENSOR REMARK 3 S11: 0.1045 S12: -0.2599 S13: 0.0966 REMARK 3 S21: 0.0273 S22: -0.1091 S23: -0.0852 REMARK 3 S31: -0.0193 S32: 0.0890 S33: -0.0028 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 41 THROUGH 53 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.2548 -12.5281 13.6491 REMARK 3 T TENSOR REMARK 3 T11: 0.1003 T22: 0.1183 REMARK 3 T33: 0.1742 T12: -0.0102 REMARK 3 T13: -0.0076 T23: -0.0158 REMARK 3 L TENSOR REMARK 3 L11: 2.5112 L22: 3.2102 REMARK 3 L33: 1.8469 L12: 1.2278 REMARK 3 L13: -0.7130 L23: -0.9209 REMARK 3 S TENSOR REMARK 3 S11: -0.0075 S12: -0.1018 S13: 0.2116 REMARK 3 S21: -0.0072 S22: 0.0419 S23: -0.1181 REMARK 3 S31: 0.0306 S32: 0.0937 S33: -0.0414 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 54 THROUGH 64 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.1383 -18.0140 4.5018 REMARK 3 T TENSOR REMARK 3 T11: 0.1232 T22: 0.1307 REMARK 3 T33: 0.1510 T12: -0.0102 REMARK 3 T13: -0.0008 T23: 0.0139 REMARK 3 L TENSOR REMARK 3 L11: 3.5666 L22: 5.4894 REMARK 3 L33: 0.6803 L12: 4.3772 REMARK 3 L13: 0.2532 L23: 0.2811 REMARK 3 S TENSOR REMARK 3 S11: -0.3211 S12: 0.2303 S13: 0.2054 REMARK 3 S21: -0.5647 S22: 0.2898 S23: 0.0104 REMARK 3 S31: -0.1247 S32: 0.0466 S33: 0.0058 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 65 THROUGH 111 ) REMARK 3 ORIGIN FOR THE GROUP (A): -27.2366 -17.8618 10.5834 REMARK 3 T TENSOR REMARK 3 T11: 0.1186 T22: 0.1310 REMARK 3 T33: 0.1776 T12: -0.0056 REMARK 3 T13: -0.0018 T23: -0.0184 REMARK 3 L TENSOR REMARK 3 L11: 2.0861 L22: 1.3948 REMARK 3 L33: 0.1340 L12: 1.5722 REMARK 3 L13: 0.0744 L23: -0.0126 REMARK 3 S TENSOR REMARK 3 S11: 0.0615 S12: -0.0485 S13: 0.3639 REMARK 3 S21: 0.0588 S22: -0.0629 S23: 0.1743 REMARK 3 S31: -0.0443 S32: 0.0240 S33: 0.0003 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 112 THROUGH 124 ) REMARK 3 ORIGIN FOR THE GROUP (A): -37.0124 -37.2311 11.7958 REMARK 3 T TENSOR REMARK 3 T11: 0.0807 T22: 0.0934 REMARK 3 T33: 0.0716 T12: 0.0133 REMARK 3 T13: -0.0061 T23: 0.0035 REMARK 3 L TENSOR REMARK 3 L11: 4.6566 L22: 0.0230 REMARK 3 L33: 0.2274 L12: 0.2609 REMARK 3 L13: 1.0110 L23: 0.0483 REMARK 3 S TENSOR REMARK 3 S11: 0.0397 S12: 0.0493 S13: -0.1542 REMARK 3 S21: -0.0182 S22: -0.0492 S23: -0.0902 REMARK 3 S31: 0.0444 S32: 0.0612 S33: 0.0078 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 125 THROUGH 158 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.4730 -22.8766 7.5443 REMARK 3 T TENSOR REMARK 3 T11: 0.0837 T22: 0.1059 REMARK 3 T33: 0.1082 T12: 0.0010 REMARK 3 T13: -0.0046 T23: 0.0081 REMARK 3 L TENSOR REMARK 3 L11: 1.4396 L22: 1.0807 REMARK 3 L33: 0.3071 L12: 1.0504 REMARK 3 L13: -0.1254 L23: -0.0178 REMARK 3 S TENSOR REMARK 3 S11: -0.1421 S12: 0.1530 S13: 0.0521 REMARK 3 S21: -0.1298 S22: 0.1423 S23: -0.1068 REMARK 3 S31: -0.0113 S32: -0.0042 S33: 0.0053 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4XOC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 16-OCT-14. REMARK 100 THE DEPOSITION ID IS D_1000205857. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-JUL-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06DA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.36246 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 66393 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.420 REMARK 200 RESOLUTION RANGE LOW (A) : 54.806 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 200 DATA REDUNDANCY : 16.90 REMARK 200 R MERGE (I) : 0.11700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.42 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.51 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.4 REMARK 200 DATA REDUNDANCY IN SHELL : 13.40 REMARK 200 R MERGE FOR SHELL (I) : 1.11800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 3MCY REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.26 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.58 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 17 % PEG2000MME, 0.1M HEPES PH 7.5, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 14.16500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 14.16500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 70.03500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 88.02800 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 70.03500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 88.02800 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 14.16500 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 70.03500 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 88.02800 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 14.16500 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 70.03500 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 88.02800 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 C13 KGM B 501 LIES ON A SPECIAL POSITION. REMARK 375 C11 KGM B 501 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 613 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 807 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 880 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 842 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 159 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HH11 ARG A 98 O HOH A 602 1.52 REMARK 500 O HOH B 635 O HOH B 788 1.91 REMARK 500 O HOH A 605 O HOH A 629 2.02 REMARK 500 O HOH B 687 O HOH B 788 2.04 REMARK 500 O HOH A 854 O HOH A 893 2.06 REMARK 500 O HOH A 773 O HOH A 775 2.07 REMARK 500 O HOH A 680 O HOH A 867 2.07 REMARK 500 O HOH A 610 O HOH A 796 2.08 REMARK 500 O HOH A 881 O HOH A 891 2.12 REMARK 500 O HOH B 781 O HOH B 802 2.12 REMARK 500 O HOH A 840 O HOH A 841 2.14 REMARK 500 O HOH A 713 O HOH A 821 2.15 REMARK 500 O HOH B 741 O HOH B 768 2.16 REMARK 500 NH1 ARG A 60 O HOH A 601 2.16 REMARK 500 O HOH B 701 O HOH B 774 2.18 REMARK 500 O HOH A 769 O HOH A 828 2.18 REMARK 500 O HOH A 773 O HOH A 820 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 HZ1 LYS A 76 HH TYR A 149 1556 1.26 REMARK 500 O HOH A 816 O HOH A 816 3455 1.96 REMARK 500 O HOH A 629 O HOH B 775 6444 2.04 REMARK 500 O HOH A 726 O HOH A 726 3455 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR B 48 59.29 -141.26 REMARK 500 ASN B 96 29.19 -142.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 911 DISTANCE = 5.88 ANGSTROMS REMARK 525 HOH A 912 DISTANCE = 5.91 ANGSTROMS REMARK 525 HOH A 913 DISTANCE = 6.29 ANGSTROMS REMARK 525 HOH A 914 DISTANCE = 6.42 ANGSTROMS REMARK 525 HOH A 915 DISTANCE = 6.76 ANGSTROMS REMARK 525 HOH B 878 DISTANCE = 5.90 ANGSTROMS REMARK 525 HOH B 879 DISTANCE = 6.29 ANGSTROMS REMARK 525 HOH B 880 DISTANCE = 6.30 ANGSTROMS REMARK 525 HOH B 881 DISTANCE = 7.23 ANGSTROMS DBREF 4XOC A 1 159 UNP Q0T8Y8 Q0T8Y8_ECOL5 25 183 DBREF 4XOC B 1 159 UNP Q0T8Y8 Q0T8Y8_ECOL5 25 183 SEQRES 1 A 159 PHE ALA CYS LYS THR ALA ASN GLY THR ALA ILE PRO ILE SEQRES 2 A 159 GLY GLY GLY SER ALA ASN VAL TYR VAL ASN LEU ALA PRO SEQRES 3 A 159 ALA VAL ASN VAL GLY GLN ASN LEU VAL VAL ASP LEU SER SEQRES 4 A 159 THR GLN ILE PHE CYS HIS ASN ASP TYR PRO GLU THR ILE SEQRES 5 A 159 THR ASP TYR VAL THR LEU GLN ARG GLY SER ALA TYR GLY SEQRES 6 A 159 GLY VAL LEU SER SER PHE SER GLY THR VAL LYS TYR ASN SEQRES 7 A 159 GLY SER SER TYR PRO PHE PRO THR THR SER GLU THR PRO SEQRES 8 A 159 ARG VAL VAL TYR ASN SER ARG THR ASP LYS PRO TRP PRO SEQRES 9 A 159 VAL ALA LEU TYR LEU THR PRO VAL SER SER ALA GLY GLY SEQRES 10 A 159 VAL ALA ILE LYS ALA GLY SER LEU ILE ALA VAL LEU ILE SEQRES 11 A 159 LEU ARG GLN THR ASN ASN TYR ASN SER ASP ASP PHE GLN SEQRES 12 A 159 PHE VAL TRP ASN ILE TYR ALA ASN ASN ASP VAL VAL VAL SEQRES 13 A 159 PRO THR GLY SEQRES 1 B 159 PHE ALA CYS LYS THR ALA ASN GLY THR ALA ILE PRO ILE SEQRES 2 B 159 GLY GLY GLY SER ALA ASN VAL TYR VAL ASN LEU ALA PRO SEQRES 3 B 159 ALA VAL ASN VAL GLY GLN ASN LEU VAL VAL ASP LEU SER SEQRES 4 B 159 THR GLN ILE PHE CYS HIS ASN ASP TYR PRO GLU THR ILE SEQRES 5 B 159 THR ASP TYR VAL THR LEU GLN ARG GLY SER ALA TYR GLY SEQRES 6 B 159 GLY VAL LEU SER SER PHE SER GLY THR VAL LYS TYR ASN SEQRES 7 B 159 GLY SER SER TYR PRO PHE PRO THR THR SER GLU THR PRO SEQRES 8 B 159 ARG VAL VAL TYR ASN SER ARG THR ASP LYS PRO TRP PRO SEQRES 9 B 159 VAL ALA LEU TYR LEU THR PRO VAL SER SER ALA GLY GLY SEQRES 10 B 159 VAL ALA ILE LYS ALA GLY SER LEU ILE ALA VAL LEU ILE SEQRES 11 B 159 LEU ARG GLN THR ASN ASN TYR ASN SER ASP ASP PHE GLN SEQRES 12 B 159 PHE VAL TRP ASN ILE TYR ALA ASN ASN ASP VAL VAL VAL SEQRES 13 B 159 PRO THR GLY HET KGM A 501 45 HET KGM B 501 90 HETNAM KGM HEPTYL ALPHA-D-MANNOPYRANOSIDE HETSYN KGM HEPTYL ALPHA-D-MANNOPYRANNOSIDE; HEPTYL ALPHA-D- HETSYN 2 KGM MANNOSIDE; HEPTYL D-MANNOSIDE; HEPTYL MANNOSIDE FORMUL 3 KGM 2(C13 H26 O6) FORMUL 5 HOH *596(H2 O) HELIX 1 AA1 TYR A 64 SER A 70 1 7 HELIX 2 AA2 TYR B 64 SER B 70 1 7 SHEET 1 AA1 4 ALA A 10 ILE A 11 0 SHEET 2 AA1 4 ALA A 2 THR A 5 -1 N CYS A 3 O ILE A 11 SHEET 3 AA1 4 ILE A 42 HIS A 45 -1 O PHE A 43 N LYS A 4 SHEET 4 AA1 4 LYS A 101 PRO A 102 -1 O LYS A 101 N CYS A 44 SHEET 1 AA2 5 GLY A 16 VAL A 22 0 SHEET 2 AA2 5 PHE A 142 ALA A 150 1 O TYR A 149 N VAL A 20 SHEET 3 AA2 5 LEU A 125 ASN A 135 -1 N ALA A 127 O ILE A 148 SHEET 4 AA2 5 ASP A 54 ALA A 63 -1 N ARG A 60 O ILE A 130 SHEET 5 AA2 5 VAL A 93 TYR A 95 -1 O TYR A 95 N ASP A 54 SHEET 1 AA3 5 SER A 80 PHE A 84 0 SHEET 2 AA3 5 PHE A 71 TYR A 77 -1 N VAL A 75 O TYR A 82 SHEET 3 AA3 5 VAL A 105 PRO A 111 -1 O THR A 110 N SER A 72 SHEET 4 AA3 5 LEU A 34 ASP A 37 -1 N LEU A 34 O LEU A 109 SHEET 5 AA3 5 SER B 113 SER B 114 -1 O SER B 114 N VAL A 35 SHEET 1 AA4 2 GLY A 117 ILE A 120 0 SHEET 2 AA4 2 VAL A 154 VAL A 156 -1 O VAL A 154 N ALA A 119 SHEET 1 AA5 4 ALA B 10 ILE B 11 0 SHEET 2 AA5 4 ALA B 2 THR B 5 -1 N CYS B 3 O ILE B 11 SHEET 3 AA5 4 ILE B 42 HIS B 45 -1 O PHE B 43 N LYS B 4 SHEET 4 AA5 4 LYS B 101 PRO B 102 -1 O LYS B 101 N CYS B 44 SHEET 1 AA6 5 GLY B 16 VAL B 22 0 SHEET 2 AA6 5 PHE B 142 ALA B 150 1 O TYR B 149 N VAL B 20 SHEET 3 AA6 5 LEU B 125 ASN B 135 -1 N ILE B 126 O ILE B 148 SHEET 4 AA6 5 ASP B 54 ALA B 63 -1 N ARG B 60 O ILE B 130 SHEET 5 AA6 5 VAL B 93 TYR B 95 -1 O TYR B 95 N ASP B 54 SHEET 1 AA7 4 LEU B 34 ASP B 37 0 SHEET 2 AA7 4 VAL B 105 PRO B 111 -1 O LEU B 109 N LEU B 34 SHEET 3 AA7 4 PHE B 71 TYR B 77 -1 N LYS B 76 O ALA B 106 SHEET 4 AA7 4 SER B 80 PHE B 84 -1 O SER B 80 N TYR B 77 SHEET 1 AA8 2 VAL B 118 ILE B 120 0 SHEET 2 AA8 2 VAL B 154 VAL B 155 -1 O VAL B 154 N ALA B 119 SSBOND 1 CYS A 3 CYS A 44 1555 1555 2.14 SSBOND 2 CYS B 3 CYS B 44 1555 1555 2.12 CISPEP 1 PHE A 84 PRO A 85 0 0.78 CISPEP 2 PHE B 84 PRO B 85 0 -0.51 CRYST1 140.070 176.056 28.330 90.00 90.00 90.00 C 2 2 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007139 0.000000 0.000000 0.00000 SCALE2 0.000000 0.005680 0.000000 0.00000 SCALE3 0.000000 0.000000 0.035298 0.00000