HEADER HORMONE 17-JAN-15 4XPJ TITLE CRYSTAL STRUCTURE OF NERVE GROWTH FACTOR IN COMPLEX WITH TITLE 2 LYSOPHOSPHATIDYLINOSITOL COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-NERVE GROWTH FACTOR; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: BETA-NGF SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090 KEYWDS NERVE GROWTH FACTOR, LYSOPI, HORMONE EXPDTA X-RAY DIFFRACTION AUTHOR H.L.SUN,T.JIANG REVDAT 2 08-NOV-23 4XPJ 1 SOURCE REMARK HETSYN REVDAT 1 15-JUL-15 4XPJ 0 JRNL AUTH H.L.SUN,T.JIANG JRNL TITL THE STRUCTURE OF NERVE GROWTH FACTOR IN COMPLEX WITH JRNL TITL 2 LYSOPHOSPHATIDYLINOSITOL JRNL REF ACTA CRYSTALLOGR.,SECT.F V. 71 906 2015 JRNL REFN ESSN 2053-230X JRNL PMID 26144237 JRNL DOI 10.1107/S2053230X15008870 REMARK 2 REMARK 2 RESOLUTION. 2.61 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.9_1692) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.61 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.30 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 89.7 REMARK 3 NUMBER OF REFLECTIONS : 8340 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.199 REMARK 3 R VALUE (WORKING SET) : 0.195 REMARK 3 FREE R VALUE : 0.266 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.960 REMARK 3 FREE R VALUE TEST SET COUNT : 414 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 37.3081 - 3.7559 0.99 2995 165 0.1851 0.2405 REMARK 3 2 3.7559 - 2.9815 1.00 2923 143 0.1970 0.2866 REMARK 3 3 2.9815 - 2.6048 0.69 2008 106 0.2296 0.3243 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.320 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.390 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 1728 REMARK 3 ANGLE : 1.085 2332 REMARK 3 CHIRALITY : 0.047 272 REMARK 3 PLANARITY : 0.004 287 REMARK 3 DIHEDRAL : 16.927 605 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): -28.0555 4.5736 14.2545 REMARK 3 T TENSOR REMARK 3 T11: 0.2385 T22: 0.5008 REMARK 3 T33: 0.2474 T12: 0.0718 REMARK 3 T13: 0.0245 T23: -0.0829 REMARK 3 L TENSOR REMARK 3 L11: 3.6369 L22: 2.0848 REMARK 3 L33: 1.5829 L12: 0.0132 REMARK 3 L13: -0.8618 L23: 0.5325 REMARK 3 S TENSOR REMARK 3 S11: -0.1928 S12: -0.1224 S13: 0.0249 REMARK 3 S21: 0.1827 S22: -0.0886 S23: 0.5142 REMARK 3 S31: -0.0886 S32: -0.5743 S33: 0.2215 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4XPJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 22-JAN-15. REMARK 100 THE DEPOSITION ID IS D_1000206028. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-APR-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.3 - 6.7 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.978 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 8340 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 5.400 REMARK 200 R MERGE (I) : 0.07500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.5800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.64 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.50 REMARK 200 R MERGE FOR SHELL (I) : 0.53400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: 4EAX REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.76 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.84 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M IMIDAZOLE, 1.0 M NA ACETATE, PH REMARK 280 6.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 48.34450 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 27.91171 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 54.77967 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 48.34450 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 27.91171 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 54.77967 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 48.34450 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 27.91171 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 54.77967 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 48.34450 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 27.91171 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 54.77967 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 48.34450 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 27.91171 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 54.77967 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 48.34450 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 27.91171 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 54.77967 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 55.82342 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 109.55933 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 55.82342 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 109.55933 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 55.82342 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 109.55933 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 55.82342 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 109.55933 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 55.82342 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 109.55933 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 55.82342 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 109.55933 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2690 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12340 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -18.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 1 REMARK 465 SER A 2 REMARK 465 THR A 3 REMARK 465 HIS A 4 REMARK 465 PRO A 5 REMARK 465 VAL A 6 REMARK 465 PHE A 7 REMARK 465 HIS A 8 REMARK 465 MET A 9 REMARK 465 LYS A 115 REMARK 465 ALA A 116 REMARK 465 THR A 117 REMARK 465 ARG A 118 REMARK 465 ARG A 119 REMARK 465 GLY A 120 REMARK 465 SER B 1 REMARK 465 SER B 2 REMARK 465 THR B 3 REMARK 465 HIS B 4 REMARK 465 PRO B 5 REMARK 465 VAL B 6 REMARK 465 PHE B 7 REMARK 465 HIS B 8 REMARK 465 MET B 9 REMARK 465 GLY B 10 REMARK 465 ALA B 116 REMARK 465 THR B 117 REMARK 465 ARG B 118 REMARK 465 ARG B 119 REMARK 465 GLY B 120 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG SER B 47 O HOH B 301 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 59 -72.83 -77.48 REMARK 500 PRO A 63 -72.11 -59.50 REMARK 500 SER A 66 3.90 -68.68 REMARK 500 ASP A 72 80.76 -67.10 REMARK 500 GLU A 94 -6.34 74.53 REMARK 500 PHE B 12 132.18 -172.11 REMARK 500 ASN B 45 -130.61 45.27 REMARK 500 ASP B 72 84.10 -66.40 REMARK 500 LYS B 74 -73.47 -51.42 REMARK 500 LYS B 95 -87.32 -67.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 334 DISTANCE = 6.51 ANGSTROMS REMARK 525 HOH B 335 DISTANCE = 7.04 ANGSTROMS REMARK 525 HOH B 336 DISTANCE = 7.53 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue LPY B 201 DBREF 4XPJ A 1 120 UNP P01139 NGF_MOUSE 122 241 DBREF 4XPJ B 1 120 UNP P01139 NGF_MOUSE 122 241 SEQRES 1 A 120 SER SER THR HIS PRO VAL PHE HIS MET GLY GLU PHE SER SEQRES 2 A 120 VAL CYS ASP SER VAL SER VAL TRP VAL GLY ASP LYS THR SEQRES 3 A 120 THR ALA THR ASP ILE LYS GLY LYS GLU VAL THR VAL LEU SEQRES 4 A 120 ALA GLU VAL ASN ILE ASN ASN SER VAL PHE ARG GLN TYR SEQRES 5 A 120 PHE PHE GLU THR LYS CYS ARG ALA SER ASN PRO VAL GLU SEQRES 6 A 120 SER GLY CYS ARG GLY ILE ASP SER LYS HIS TRP ASN SER SEQRES 7 A 120 TYR CYS THR THR THR HIS THR PHE VAL LYS ALA LEU THR SEQRES 8 A 120 THR ASP GLU LYS GLN ALA ALA TRP ARG PHE ILE ARG ILE SEQRES 9 A 120 ASP THR ALA CYS VAL CYS VAL LEU SER ARG LYS ALA THR SEQRES 10 A 120 ARG ARG GLY SEQRES 1 B 120 SER SER THR HIS PRO VAL PHE HIS MET GLY GLU PHE SER SEQRES 2 B 120 VAL CYS ASP SER VAL SER VAL TRP VAL GLY ASP LYS THR SEQRES 3 B 120 THR ALA THR ASP ILE LYS GLY LYS GLU VAL THR VAL LEU SEQRES 4 B 120 ALA GLU VAL ASN ILE ASN ASN SER VAL PHE ARG GLN TYR SEQRES 5 B 120 PHE PHE GLU THR LYS CYS ARG ALA SER ASN PRO VAL GLU SEQRES 6 B 120 SER GLY CYS ARG GLY ILE ASP SER LYS HIS TRP ASN SER SEQRES 7 B 120 TYR CYS THR THR THR HIS THR PHE VAL LYS ALA LEU THR SEQRES 8 B 120 THR ASP GLU LYS GLN ALA ALA TRP ARG PHE ILE ARG ILE SEQRES 9 B 120 ASP THR ALA CYS VAL CYS VAL LEU SER ARG LYS ALA THR SEQRES 10 B 120 ARG ARG GLY HET LPY B 201 35 HETNAM LPY (2R)-2-HYDROXY-3-{[(S)-HYDROXY{[(1S,2R,3R,4S,5S,6R)-2, HETNAM 2 LPY 3,4,5,6-PENTAHYDROXYCYCLOHEXYL]OXY}PHOSPHORYL]OXY}PROP HETNAM 3 LPY YL TRIDECANOATE HETSYN LPY SN-1-TRIDECANOYL-PHOSPHATIDYLINOSITOL FORMUL 3 LPY C22 H43 O12 P FORMUL 4 HOH *60(H2 O) SHEET 1 AA1 5 PHE A 12 SER A 13 0 SHEET 2 AA1 5 ALA B 97 ARG B 114 -1 O LEU B 112 N PHE A 12 SHEET 3 AA1 5 TRP B 76 THR B 92 -1 N THR B 91 O ALA B 98 SHEET 4 AA1 5 GLU B 35 VAL B 38 -1 N THR B 37 O THR B 92 SHEET 5 AA1 5 THR B 27 THR B 29 -1 N ALA B 28 O VAL B 36 SHEET 1 AA2 2 SER A 17 VAL A 22 0 SHEET 2 AA2 2 PHE A 53 CYS A 58 -1 O PHE A 53 N VAL A 22 SHEET 1 AA3 5 THR A 27 THR A 29 0 SHEET 2 AA3 5 GLU A 35 VAL A 38 -1 O VAL A 36 N ALA A 28 SHEET 3 AA3 5 ASN A 77 THR A 92 -1 O THR A 92 N THR A 37 SHEET 4 AA3 5 ALA A 97 SER A 113 -1 O ILE A 102 N VAL A 87 SHEET 5 AA3 5 PHE B 12 SER B 13 -1 O PHE B 12 N LEU A 112 SHEET 1 AA4 2 GLU A 41 ILE A 44 0 SHEET 2 AA4 2 SER A 47 ARG A 50 -1 O SER A 47 N ILE A 44 SHEET 1 AA5 2 SER B 17 VAL B 22 0 SHEET 2 AA5 2 PHE B 53 CYS B 58 -1 O GLU B 55 N VAL B 20 SHEET 1 AA6 2 GLU B 41 ILE B 44 0 SHEET 2 AA6 2 SER B 47 ARG B 50 -1 O PHE B 49 N VAL B 42 SSBOND 1 CYS A 15 CYS A 80 1555 1555 2.03 SSBOND 2 CYS A 58 CYS A 108 1555 1555 2.03 SSBOND 3 CYS A 68 CYS A 110 1555 1555 2.04 SSBOND 4 CYS B 15 CYS B 80 1555 1555 2.03 SSBOND 5 CYS B 58 CYS B 108 1555 1555 2.03 SSBOND 6 CYS B 68 CYS B 110 1555 1555 2.04 SITE 1 AC1 12 ASN A 45 ASN A 46 LYS A 88 TRP A 99 SITE 2 AC1 12 GLU B 11 ASN B 45 PHE B 49 ARG B 50 SITE 3 AC1 12 TYR B 52 LYS B 88 TRP B 99 HOH B 314 CRYST1 96.689 96.689 164.339 90.00 90.00 120.00 H 3 2 36 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010342 0.005971 0.000000 0.00000 SCALE2 0.000000 0.011942 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006085 0.00000