HEADER HYDROLASE 18-JAN-15 4XQ0 TITLE STRUCTURE OF FISSION YEAST RNA POLYMERASE II CTD PHOSPHATASE FCP1- TITLE 2 R271A BOUND TO BERYLLIUM FLUORIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: RNA POLYMERASE II SUBUNIT A C-TERMINAL DOMAIN PHOSPHATASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CTD PHOSPHATASE FCP1; COMPND 5 EC: 3.1.3.16; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SCHIZOSACCHAROMYCES POMBE (STRAIN 972 / ATCC SOURCE 3 24843); SOURCE 4 ORGANISM_COMMON: FISSION YEAST; SOURCE 5 ORGANISM_TAXID: 284812; SOURCE 6 STRAIN: 972 / ATCC 24843; SOURCE 7 GENE: FCP1, SPAC19B12.05C; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 10 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3) PRIL; SOURCE 11 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 12 EXPRESSION_SYSTEM_PLASMID: TOPO-ADAPTED PET28B-SMT3 KEYWDS PHOSPHATASE, POLII-CTD, TRANSITION STATE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR A.GHOSH,C.D.LIMA REVDAT 6 27-SEP-23 4XQ0 1 REMARK REVDAT 5 25-DEC-19 4XQ0 1 REMARK REVDAT 4 20-SEP-17 4XQ0 1 SOURCE JRNL REMARK REVDAT 3 03-JUN-15 4XQ0 1 JRNL REVDAT 2 29-APR-15 4XQ0 1 JRNL REVDAT 1 04-MAR-15 4XQ0 0 JRNL AUTH B.SCHWER,A.GHOSH,A.M.SANCHEZ,C.D.LIMA,S.SHUMAN JRNL TITL GENETIC AND STRUCTURAL ANALYSIS OF THE ESSENTIAL FISSION JRNL TITL 2 YEAST RNA POLYMERASE II CTD PHOSPHATASE FCP1. JRNL REF RNA V. 21 1135 2015 JRNL REFN ESSN 1469-9001 JRNL PMID 25883047 JRNL DOI 10.1261/RNA.050286.115 REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.60 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.9 REMARK 3 NUMBER OF REFLECTIONS : 32886 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.160 REMARK 3 R VALUE (WORKING SET) : 0.158 REMARK 3 FREE R VALUE : 0.201 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.030 REMARK 3 FREE R VALUE TEST SET COUNT : 1654 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 36.6019 - 4.2335 0.97 2833 140 0.1567 0.1719 REMARK 3 2 4.2335 - 3.3610 0.99 2771 135 0.1358 0.1857 REMARK 3 3 3.3610 - 2.9363 0.98 2704 164 0.1604 0.2192 REMARK 3 4 2.9363 - 2.6680 0.97 2666 147 0.1583 0.1860 REMARK 3 5 2.6680 - 2.4768 0.97 2639 138 0.1499 0.2084 REMARK 3 6 2.4768 - 2.3308 0.96 2611 122 0.1417 0.1631 REMARK 3 7 2.3308 - 2.2141 0.95 2581 139 0.1451 0.2106 REMARK 3 8 2.2141 - 2.1177 0.95 2561 156 0.1559 0.1985 REMARK 3 9 2.1177 - 2.0362 0.94 2536 154 0.1716 0.2230 REMARK 3 10 2.0362 - 1.9659 0.93 2502 141 0.1907 0.2747 REMARK 3 11 1.9659 - 1.9045 0.90 2451 103 0.2127 0.2735 REMARK 3 12 1.9045 - 1.8500 0.88 2377 115 0.2361 0.2597 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.190 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.620 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 21.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.04 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 3043 REMARK 3 ANGLE : 1.086 4105 REMARK 3 CHIRALITY : 0.046 459 REMARK 3 PLANARITY : 0.005 523 REMARK 3 DIHEDRAL : 12.918 1165 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 150 THROUGH 225 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.8470 8.9223 48.8335 REMARK 3 T TENSOR REMARK 3 T11: 0.1131 T22: 0.1414 REMARK 3 T33: 0.1487 T12: 0.0233 REMARK 3 T13: -0.0208 T23: -0.0088 REMARK 3 L TENSOR REMARK 3 L11: 1.4469 L22: 1.8640 REMARK 3 L33: 2.3506 L12: 1.0570 REMARK 3 L13: -1.4378 L23: -1.1808 REMARK 3 S TENSOR REMARK 3 S11: -0.0203 S12: 0.1163 S13: 0.1055 REMARK 3 S21: 0.0469 S22: 0.1102 S23: 0.1513 REMARK 3 S31: -0.0890 S32: -0.2180 S33: -0.0820 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 226 THROUGH 246 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.4837 14.5514 41.3885 REMARK 3 T TENSOR REMARK 3 T11: 0.0852 T22: 0.0845 REMARK 3 T33: 0.0877 T12: 0.0380 REMARK 3 T13: 0.0030 T23: -0.0114 REMARK 3 L TENSOR REMARK 3 L11: 5.3376 L22: 4.0690 REMARK 3 L33: 3.5223 L12: 1.9762 REMARK 3 L13: -2.9436 L23: -2.8993 REMARK 3 S TENSOR REMARK 3 S11: 0.1218 S12: -0.0481 S13: 0.2597 REMARK 3 S21: 0.1803 S22: -0.0233 S23: -0.0201 REMARK 3 S31: -0.2840 S32: 0.2159 S33: -0.0331 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 247 THROUGH 316 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.9632 7.4647 36.7669 REMARK 3 T TENSOR REMARK 3 T11: 0.1657 T22: 0.1386 REMARK 3 T33: 0.1534 T12: -0.0124 REMARK 3 T13: -0.0122 T23: 0.0076 REMARK 3 L TENSOR REMARK 3 L11: 2.0879 L22: 0.7007 REMARK 3 L33: 3.2252 L12: 0.0514 REMARK 3 L13: -0.8766 L23: 0.2979 REMARK 3 S TENSOR REMARK 3 S11: 0.0159 S12: 0.0718 S13: 0.0136 REMARK 3 S21: -0.1364 S22: 0.0302 S23: 0.0994 REMARK 3 S31: -0.0421 S32: -0.1222 S33: -0.0496 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 317 THROUGH 353 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.2559 -6.2564 45.3681 REMARK 3 T TENSOR REMARK 3 T11: 0.4111 T22: 0.2986 REMARK 3 T33: 0.3250 T12: -0.0248 REMARK 3 T13: -0.0142 T23: 0.0212 REMARK 3 L TENSOR REMARK 3 L11: 4.1741 L22: 1.6589 REMARK 3 L33: 6.3997 L12: 1.2832 REMARK 3 L13: 2.3713 L23: 1.5874 REMARK 3 S TENSOR REMARK 3 S11: -0.1312 S12: 0.6074 S13: 0.0124 REMARK 3 S21: -0.4455 S22: 0.0014 S23: 0.1871 REMARK 3 S31: 0.2948 S32: -0.0892 S33: 0.0617 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 354 THROUGH 382 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.3612 -4.7060 64.6227 REMARK 3 T TENSOR REMARK 3 T11: 0.1829 T22: 0.2557 REMARK 3 T33: 0.1498 T12: 0.0712 REMARK 3 T13: 0.0107 T23: 0.0161 REMARK 3 L TENSOR REMARK 3 L11: 2.5421 L22: 6.8085 REMARK 3 L33: 8.2281 L12: 2.5460 REMARK 3 L13: -2.5708 L23: -4.8053 REMARK 3 S TENSOR REMARK 3 S11: -0.0426 S12: -0.4599 S13: -0.3357 REMARK 3 S21: 0.2140 S22: -0.4360 S23: -0.5265 REMARK 3 S31: 0.1863 S32: 0.7857 S33: 0.4117 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 383 THROUGH 408 ) REMARK 3 ORIGIN FOR THE GROUP (A): 36.4090 15.6656 35.3660 REMARK 3 T TENSOR REMARK 3 T11: 0.1486 T22: 0.1502 REMARK 3 T33: 0.1822 T12: -0.0521 REMARK 3 T13: -0.0166 T23: -0.0283 REMARK 3 L TENSOR REMARK 3 L11: 4.9791 L22: 6.7669 REMARK 3 L33: 5.7508 L12: 2.7013 REMARK 3 L13: -4.1208 L23: -5.6425 REMARK 3 S TENSOR REMARK 3 S11: -0.0419 S12: -0.1170 S13: 0.0589 REMARK 3 S21: -0.0387 S22: -0.2944 S23: -0.4660 REMARK 3 S31: -0.1693 S32: 0.5734 S33: 0.2878 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 409 THROUGH 437 ) REMARK 3 ORIGIN FOR THE GROUP (A): 38.8554 4.0127 29.2959 REMARK 3 T TENSOR REMARK 3 T11: 0.1456 T22: 0.2229 REMARK 3 T33: 0.2092 T12: 0.0025 REMARK 3 T13: 0.0681 T23: -0.0184 REMARK 3 L TENSOR REMARK 3 L11: 1.8550 L22: 8.5910 REMARK 3 L33: 1.6052 L12: -2.0079 REMARK 3 L13: 1.5966 L23: -2.7887 REMARK 3 S TENSOR REMARK 3 S11: 0.0413 S12: 0.3011 S13: 0.0320 REMARK 3 S21: -0.4985 S22: -0.1357 S23: -0.4838 REMARK 3 S31: 0.2000 S32: 0.2106 S33: 0.1938 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 438 THROUGH 518 ) REMARK 3 ORIGIN FOR THE GROUP (A): 40.1504 -14.0406 41.0277 REMARK 3 T TENSOR REMARK 3 T11: 0.2455 T22: 0.1893 REMARK 3 T33: 0.2795 T12: 0.0069 REMARK 3 T13: -0.0624 T23: -0.0278 REMARK 3 L TENSOR REMARK 3 L11: 4.1561 L22: 5.2328 REMARK 3 L33: 3.4598 L12: -1.7307 REMARK 3 L13: -0.0605 L23: -0.1341 REMARK 3 S TENSOR REMARK 3 S11: 0.0499 S12: -0.1866 S13: -0.4516 REMARK 3 S21: 0.3615 S22: 0.1300 S23: -0.3128 REMARK 3 S31: 0.4654 S32: 0.1312 S33: -0.1330 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4XQ0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-JAN-15. REMARK 100 THE DEPOSITION ID IS D_1000206097. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-OCT-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : CRYOGENICALLY-COOLED DOUBLE REMARK 200 CRYSTAL SI(111) MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 34556 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 37.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 4.700 REMARK 200 R MERGE (I) : 0.06100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.91 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.9 REMARK 200 DATA REDUNDANCY IN SHELL : 4.70 REMARK 200 R MERGE FOR SHELL (I) : 0.58400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3EF0 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.79 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.36 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 40% PEG-400 AND 100 MM MES, PH 6.5, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 27.71100 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 44.59800 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 40.12750 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 44.59800 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 27.71100 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 40.12750 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1810 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17960 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -12.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 147 REMARK 465 LEU A 148 REMARK 465 SER A 149 REMARK 465 GLU A 367 REMARK 465 GLY A 368 REMARK 465 LYS A 369 REMARK 465 PRO A 370 REMARK 465 THR A 371 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 150 CG CD NE CZ NH1 NH2 REMARK 470 ASN A 327 CG OD1 ND2 REMARK 470 PHE A 328 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLU A 334 CG CD OE1 OE2 REMARK 470 ARG A 380 CG CD NE CZ NH1 NH2 REMARK 470 LEU A 442 CG CD1 CD2 REMARK 470 LYS A 477 CG CD CE NZ REMARK 470 ARG A 479 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 729 O HOH A 756 2.05 REMARK 500 OD1 ASP A 304 O HOH A 767 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 750 O HOH A 756 2555 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 164 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 171 -72.17 -94.40 REMARK 500 THR A 174 -61.94 -108.70 REMARK 500 GLN A 265 -124.32 43.61 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 PG4 A 602 REMARK 610 PG4 A 603 REMARK 610 PG4 A 604 REMARK 610 PG4 A 605 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 606 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 BFD A 170 OD2 REMARK 620 2 ASP A 172 O 88.2 REMARK 620 3 ASP A 298 OD1 82.0 86.9 REMARK 620 4 HOH A 762 O 92.4 172.2 85.4 REMARK 620 5 HOH A 763 O 170.5 90.8 88.5 87.2 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PG4 A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PG4 A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PG4 A 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PG4 A 604 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PG4 A 605 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 606 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3EF0 RELATED DB: PDB REMARK 900 RELATED ID: 3EF1 RELATED DB: PDB REMARK 900 RELATED ID: 4XPZ RELATED DB: PDB DBREF 4XQ0 A 149 329 UNP Q9P376 FCP1_SCHPO 149 329 DBREF 4XQ0 A 332 518 UNP Q9P376 FCP1_SCHPO 394 580 SEQADV 4XQ0 SER A 147 UNP Q9P376 EXPRESSION TAG SEQADV 4XQ0 LEU A 148 UNP Q9P376 EXPRESSION TAG SEQADV 4XQ0 ALA A 271 UNP Q9P376 ARG 271 ENGINEERED MUTATION SEQADV 4XQ0 GLY A 330 UNP Q9P376 LINKER SEQADV 4XQ0 SER A 331 UNP Q9P376 LINKER SEQRES 1 A 372 SER LEU SER ARG LEU GLU SER GLU ASN VAL LYS ARG LEU SEQRES 2 A 372 ARG GLN GLU LYS ARG LEU SER LEU ILE VAL BFD LEU ASP SEQRES 3 A 372 GLN THR ILE ILE HIS ALA THR VAL ASP PRO THR VAL GLY SEQRES 4 A 372 GLU TRP MET SER ASP PRO GLY ASN VAL ASN TYR ASP VAL SEQRES 5 A 372 LEU ARG ASP VAL ARG SER PHE ASN LEU GLN GLU GLY PRO SEQRES 6 A 372 SER GLY TYR THR SER CYS TYR TYR ILE LYS PHE ARG PRO SEQRES 7 A 372 GLY LEU ALA GLN PHE LEU GLN LYS ILE SER GLU LEU TYR SEQRES 8 A 372 GLU LEU HIS ILE TYR THR MET GLY THR LYS ALA TYR ALA SEQRES 9 A 372 LYS GLU VAL ALA LYS ILE ILE ASP PRO THR GLY LYS LEU SEQRES 10 A 372 PHE GLN ASP ARG VAL LEU SER ALA ASP ASP SER GLY SER SEQRES 11 A 372 LEU ALA GLN LYS SER LEU ARG ARG LEU PHE PRO CYS ASP SEQRES 12 A 372 THR SER MET VAL VAL VAL ILE ASP ASP ARG GLY ASP VAL SEQRES 13 A 372 TRP ASP TRP ASN PRO ASN LEU ILE LYS VAL VAL PRO TYR SEQRES 14 A 372 GLU PHE PHE VAL GLY ILE GLY ASP ILE ASN SER ASN PHE SEQRES 15 A 372 LEU GLY SER ASN ARG GLU ALA LEU GLU GLU GLN ASN LYS SEQRES 16 A 372 GLU ARG VAL THR ALA LEU GLU LEU GLN LYS SER GLU ARG SEQRES 17 A 372 PRO LEU ALA LYS GLN GLN ASN ALA LEU LEU GLU ASP GLU SEQRES 18 A 372 GLY LYS PRO THR PRO SER HIS THR LEU LEU HIS ASN ARG SEQRES 19 A 372 ASP HIS GLU LEU GLU ARG LEU GLU LYS VAL LEU LYS ASP SEQRES 20 A 372 ILE HIS ALA VAL TYR TYR GLU GLU GLU ASN ASP ILE SER SEQRES 21 A 372 SER ARG SER GLY ASN HIS LYS HIS ALA ASN VAL GLY LEU SEQRES 22 A 372 ILE ILE PRO LYS MET LYS GLN LYS VAL LEU LYS GLY CYS SEQRES 23 A 372 ARG LEU LEU PHE SER GLY VAL ILE PRO LEU GLY VAL ASP SEQRES 24 A 372 VAL LEU SER SER ASP ILE ALA LYS TRP ALA MET SER PHE SEQRES 25 A 372 GLY ALA GLU VAL VAL LEU ASP PHE SER VAL PRO PRO THR SEQRES 26 A 372 HIS LEU ILE ALA ALA LYS ILE ARG THR GLU LYS VAL LYS SEQRES 27 A 372 LYS ALA VAL SER MET GLY ASN ILE LYS VAL VAL LYS LEU SEQRES 28 A 372 ASN TRP LEU THR GLU SER LEU SER GLN TRP LYS ARG LEU SEQRES 29 A 372 PRO GLU SER ASP TYR LEU LEU TYR MODRES 4XQ0 BFD A 170 ASP MODIFIED RESIDUE HET BFD A 170 12 HET PG4 A 601 13 HET PG4 A 602 12 HET PG4 A 603 9 HET PG4 A 604 7 HET PG4 A 605 6 HET MG A 606 1 HETNAM BFD ASPARTATE BERYLLIUM TRIFLUORIDE HETNAM PG4 TETRAETHYLENE GLYCOL HETNAM MG MAGNESIUM ION FORMUL 1 BFD C4 H6 BE F3 N O4 2- FORMUL 2 PG4 5(C8 H18 O5) FORMUL 7 MG MG 2+ FORMUL 8 HOH *217(H2 O) HELIX 1 AA1 ARG A 150 LYS A 163 1 14 HELIX 2 AA2 PRO A 182 SER A 189 1 8 HELIX 3 AA3 ASN A 195 ARG A 200 1 6 HELIX 4 AA4 GLY A 225 GLU A 235 1 11 HELIX 5 AA5 THR A 246 ASP A 258 1 13 HELIX 6 AA6 SER A 281 LEU A 285 5 5 HELIX 7 AA7 GLY A 300 ASP A 304 5 5 HELIX 8 AA8 ALA A 335 ARG A 354 1 20 HELIX 9 AA9 ARG A 354 ASP A 366 1 13 HELIX 10 AB1 HIS A 382 SER A 409 1 28 HELIX 11 AB2 ASN A 416 GLN A 426 1 11 HELIX 12 AB3 SER A 449 PHE A 458 1 10 HELIX 13 AB4 THR A 480 GLY A 490 1 11 HELIX 14 AB5 LEU A 497 TRP A 507 1 11 HELIX 15 AB6 PRO A 511 LEU A 516 5 6 SHEET 1 AA1 5 VAL A 268 LEU A 269 0 SHEET 2 AA1 5 TYR A 237 TYR A 242 1 N ILE A 241 O LEU A 269 SHEET 3 AA1 5 LEU A 165 VAL A 169 1 N LEU A 165 O GLU A 238 SHEET 4 AA1 5 VAL A 293 ASP A 297 1 O ILE A 296 N ILE A 168 SHEET 5 AA1 5 LEU A 309 LYS A 311 1 O ILE A 310 N VAL A 295 SHEET 1 AA2 3 ILE A 176 THR A 179 0 SHEET 2 AA2 3 TYR A 214 PHE A 222 -1 O TYR A 219 N THR A 179 SHEET 3 AA2 3 ARG A 203 GLU A 209 -1 N GLU A 209 O TYR A 214 SHEET 1 AA3 4 GLU A 461 VAL A 462 0 SHEET 2 AA3 4 ARG A 433 SER A 437 1 N LEU A 434 O GLU A 461 SHEET 3 AA3 4 HIS A 472 ALA A 475 1 O ILE A 474 N SER A 437 SHEET 4 AA3 4 LYS A 493 LYS A 496 1 O LYS A 493 N LEU A 473 LINK C VAL A 169 N BFD A 170 1555 1555 1.33 LINK C BFD A 170 N LEU A 171 1555 1555 1.33 LINK OD2 BFD A 170 MG MG A 606 1555 1555 1.95 LINK O ASP A 172 MG MG A 606 1555 1555 2.03 LINK OD1 ASP A 298 MG MG A 606 1555 1555 2.10 LINK MG MG A 606 O HOH A 762 1555 1555 2.10 LINK MG MG A 606 O HOH A 763 1555 1555 1.99 SITE 1 AC1 10 GLU A 186 TRP A 187 ASP A 190 ASN A 193 SITE 2 AC1 10 SER A 274 SER A 276 SER A 281 ARG A 283 SITE 3 AC1 10 ALA A 357 ASN A 361 SITE 1 AC2 9 LYS A 163 ARG A 203 LYS A 255 ILE A 256 SITE 2 AC2 9 HIS A 395 TYR A 399 GLU A 400 ASN A 403 SITE 3 AC2 9 HOH A 735 SITE 1 AC3 8 LYS A 311 VAL A 313 GLU A 383 ARG A 386 SITE 2 AC3 8 SER A 505 TRP A 507 PG4 A 604 HOH A 791 SITE 1 AC4 3 LYS A 389 ASP A 393 PG4 A 603 SITE 1 AC5 2 GLY A 300 ASP A 301 SITE 1 AC6 5 BFD A 170 ASP A 172 ASP A 298 HOH A 762 SITE 2 AC6 5 HOH A 763 CRYST1 55.422 80.255 89.196 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018043 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012460 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011211 0.00000