data_4XQZ # _entry.id 4XQZ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4XQZ pdb_00004xqz 10.2210/pdb4xqz/pdb WWPDB D_1000204344 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2016-01-27 2 'Structure model' 1 1 2016-07-13 3 'Structure model' 1 2 2017-09-13 4 'Structure model' 1 3 2024-01-10 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' diffrn_source 2 4 'Structure model' chem_comp_atom 3 4 'Structure model' chem_comp_bond 4 4 'Structure model' database_2 5 4 'Structure model' pdbx_initial_refinement_model 6 4 'Structure model' pdbx_struct_conn_angle 7 4 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_diffrn_source.source' 2 4 'Structure model' '_database_2.pdbx_DOI' 3 4 'Structure model' '_database_2.pdbx_database_accession' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_symmetry' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_asym_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_comp_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 16 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_atom_id' 17 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_comp_id' 18 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_symmetry' 19 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 20 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 21 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 22 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 23 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 24 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 25 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 26 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_symmetry' 27 4 'Structure model' '_pdbx_struct_conn_angle.value' 28 4 'Structure model' '_struct_conn.pdbx_dist_value' 29 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 30 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 31 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 32 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 33 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 34 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 35 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 36 4 'Structure model' '_struct_conn.ptnr1_symmetry' 37 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 38 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 39 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 40 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 41 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 42 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 43 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 44 4 'Structure model' '_struct_conn.ptnr2_symmetry' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 4XQZ _pdbx_database_status.recvd_initial_deposition_date 2015-01-20 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.content_type _pdbx_database_related.db_id _pdbx_database_related.db_name _pdbx_database_related.details unspecified 4XQY PDB . unspecified 4XSN PDB . # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Rohner, M.' 1 'Medina-Molner, A.' 2 'Spingler, B.' 3 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Inorg.Chem. _citation.journal_id_ASTM INOCAJ _citation.journal_id_CSD 0009 _citation.journal_id_ISSN 0020-1669 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 55 _citation.language ? _citation.page_first 6130 _citation.page_last 6140 _citation.title 'N,N,O and N,O,N Meridional cis Coordination of Two Guanines to Copper(II) by d(CGCGCG)2.' _citation.year 2016 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1021/acs.inorgchem.6b00672 _citation.pdbx_database_id_PubMed 27266259 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Rohner, M.' 1 ? primary 'Medina-Molner, A.' 2 ? primary 'Spingler, B.' 3 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man ;DNA (5'-D(*CP*GP*CP*GP*CP*G)-3') ; 1810.205 8 ? ? ? ? 2 non-polymer syn 'COPPER (II) ION' 63.546 6 ? ? ? ? 3 non-polymer syn 'CALCIUM ION' 40.078 2 ? ? ? ? 4 non-polymer syn 'CHLORIDE ION' 35.453 7 ? ? ? ? 5 non-polymer syn '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' 195.237 1 ? ? ? ? 6 non-polymer syn METHANOL 32.042 1 ? ? ? ? 7 water nat water 18.015 57 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code '(DC)(DG)(DC)(DG)(DC)(DG)' _entity_poly.pdbx_seq_one_letter_code_can CGCGCG _entity_poly.pdbx_strand_id A,B,C,D,E,F,G,H _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'COPPER (II) ION' CU 3 'CALCIUM ION' CA 4 'CHLORIDE ION' CL 5 '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' MES 6 METHANOL MOH 7 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 DG n 1 3 DC n 1 4 DG n 1 5 DC n 1 6 DG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 6 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'synthetic construct' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 32630 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'synthetic construct' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 32630 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CU non-polymer . 'COPPER (II) ION' ? 'Cu 2' 63.546 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 HOH non-polymer . WATER ? 'H2 O' 18.015 MES non-polymer . '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' ? 'C6 H13 N O4 S' 195.237 MOH non-polymer . METHANOL ? 'C H4 O' 32.042 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 1 1 DC DC A . n A 1 2 DG 2 2 2 DG DG A . n A 1 3 DC 3 3 3 DC DC A . n A 1 4 DG 4 4 4 DG DG A . n A 1 5 DC 5 5 5 DC DC A . n A 1 6 DG 6 6 6 DG DG A . n B 1 1 DC 1 1 1 DC DC B . n B 1 2 DG 2 2 2 DG DG B . n B 1 3 DC 3 3 3 DC DC B . n B 1 4 DG 4 4 4 DG DG B . n B 1 5 DC 5 5 5 DC DC B . n B 1 6 DG 6 6 6 DG DG B . n C 1 1 DC 1 1 1 DC DC C . n C 1 2 DG 2 2 2 DG DG C . n C 1 3 DC 3 3 3 DC DC C . n C 1 4 DG 4 4 4 DG DG C . n C 1 5 DC 5 5 5 DC DC C . n C 1 6 DG 6 6 6 DG DG C . n D 1 1 DC 1 1 1 DC DC D . n D 1 2 DG 2 2 2 DG DG D . n D 1 3 DC 3 3 3 DC DC D . n D 1 4 DG 4 4 4 DG DG D . n D 1 5 DC 5 5 5 DC DC D . n D 1 6 DG 6 6 6 DG DG D . n E 1 1 DC 1 1 1 DC DC E . n E 1 2 DG 2 2 2 DG DG E . n E 1 3 DC 3 3 3 DC DC E . n E 1 4 DG 4 4 4 DG DG E . n E 1 5 DC 5 5 5 DC DC E . n E 1 6 DG 6 6 6 DG DG E . n F 1 1 DC 1 1 1 DC DC F . n F 1 2 DG 2 2 2 DG DG F . n F 1 3 DC 3 3 3 DC DC F . n F 1 4 DG 4 4 4 DG DG F . n F 1 5 DC 5 5 5 DC DC F . n F 1 6 DG 6 6 6 DG DG F . n G 1 1 DC 1 1 1 DC DC G . n G 1 2 DG 2 2 2 DG DG G . n G 1 3 DC 3 3 3 DC DC G . n G 1 4 DG 4 4 4 DG DG G . n G 1 5 DC 5 5 5 DC DC G . n G 1 6 DG 6 6 6 DG DG G . n H 1 1 DC 1 1 1 DC DC H . n H 1 2 DG 2 2 2 DG DG H . n H 1 3 DC 3 3 3 DC DC H . n H 1 4 DG 4 4 4 DG DG H . n H 1 5 DC 5 5 5 DC DC H . n H 1 6 DG 6 6 6 DG DG H . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code I 2 CU 1 101 4 CU CU A . J 3 CA 1 102 10 CA CA A . K 4 CL 1 103 13 CL CL A . L 2 CU 1 101 1 CU CU C . M 4 CL 1 102 14 CL CL C . N 2 CU 1 101 2 CU CU D . O 5 MES 1 102 7 MES MES D . P 6 MOH 1 103 8 MOH MOH D . Q 4 CL 1 104 12 CL CL D . R 2 CU 1 101 5 CU CU E . S 3 CA 1 102 9 CA CA E . T 4 CL 1 101 11 CL CL F . U 2 CU 1 101 6 CU CU G . V 2 CU 1 101 3 CU CU H . W 4 CL 1 102 15 CL CL H . X 4 CL 1 103 16 CL CL H . Y 4 CL 1 104 17 CL CL H . Z 7 HOH 1 201 16 HOH HOH A . Z 7 HOH 2 202 54 HOH HOH A . Z 7 HOH 3 203 12 HOH HOH A . Z 7 HOH 4 204 15 HOH HOH A . Z 7 HOH 5 205 1 HOH HOH A . Z 7 HOH 6 206 24 HOH HOH A . AA 7 HOH 1 101 57 HOH HOH B . AA 7 HOH 2 102 34 HOH HOH B . AA 7 HOH 3 103 21 HOH HOH B . AA 7 HOH 4 104 10 HOH HOH B . AA 7 HOH 5 105 33 HOH HOH B . AA 7 HOH 6 106 45 HOH HOH B . AA 7 HOH 7 107 61 HOH HOH B . AA 7 HOH 8 108 79 HOH HOH B . BA 7 HOH 1 201 29 HOH HOH C . BA 7 HOH 2 202 68 HOH HOH C . BA 7 HOH 3 203 65 HOH HOH C . BA 7 HOH 4 204 75 HOH HOH C . BA 7 HOH 5 205 53 HOH HOH C . BA 7 HOH 6 206 38 HOH HOH C . BA 7 HOH 7 207 25 HOH HOH C . BA 7 HOH 8 208 18 HOH HOH C . BA 7 HOH 9 209 47 HOH HOH C . BA 7 HOH 10 210 77 HOH HOH C . CA 7 HOH 1 201 62 HOH HOH D . CA 7 HOH 2 202 3 HOH HOH D . CA 7 HOH 3 203 22 HOH HOH D . CA 7 HOH 4 204 7 HOH HOH D . CA 7 HOH 5 205 72 HOH HOH D . CA 7 HOH 6 206 41 HOH HOH D . CA 7 HOH 7 207 63 HOH HOH D . CA 7 HOH 8 208 36 HOH HOH D . DA 7 HOH 1 201 66 HOH HOH E . DA 7 HOH 2 202 58 HOH HOH E . DA 7 HOH 3 203 60 HOH HOH E . EA 7 HOH 1 201 6 HOH HOH F . EA 7 HOH 2 202 78 HOH HOH F . EA 7 HOH 3 203 74 HOH HOH F . EA 7 HOH 4 204 70 HOH HOH F . EA 7 HOH 5 205 27 HOH HOH F . EA 7 HOH 6 206 17 HOH HOH F . EA 7 HOH 7 207 67 HOH HOH F . FA 7 HOH 1 201 39 HOH HOH G . FA 7 HOH 2 202 2 HOH HOH G . FA 7 HOH 3 203 19 HOH HOH G . FA 7 HOH 4 204 52 HOH HOH G . FA 7 HOH 5 205 56 HOH HOH G . FA 7 HOH 6 206 44 HOH HOH G . FA 7 HOH 7 207 69 HOH HOH G . GA 7 HOH 1 201 26 HOH HOH H . GA 7 HOH 2 202 37 HOH HOH H . GA 7 HOH 3 203 13 HOH HOH H . GA 7 HOH 4 204 28 HOH HOH H . GA 7 HOH 5 205 23 HOH HOH H . GA 7 HOH 6 206 31 HOH HOH H . GA 7 HOH 7 207 35 HOH HOH H . GA 7 HOH 8 208 49 HOH HOH H . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 N 1 D MES 102 ? O1 ? O MES 1 O1 2 1 N 1 D MES 102 ? C2 ? O MES 1 C2 3 1 N 1 D MES 102 ? C3 ? O MES 1 C3 4 1 N 1 D MES 102 ? N4 ? O MES 1 N4 5 1 N 1 D MES 102 ? C5 ? O MES 1 C5 6 1 N 1 D MES 102 ? C6 ? O MES 1 C6 7 1 N 1 D MES 102 ? C7 ? O MES 1 C7 # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(phenix.refine: dev_1834)' 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? X-Area ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XSCALE ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . 4 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 98.28 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 4XQZ _cell.details ? _cell.formula_units_Z ? _cell.length_a 32.340 _cell.length_a_esd ? _cell.length_b 35.253 _cell.length_b_esd ? _cell.length_c 47.643 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 16 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 4XQZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 4XQZ _exptl.crystals_number ? _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 1.80 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 53.9 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 6.0 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 296 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details 'MES, calcium lactate, dioxane,' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 183 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.diffrn_id 1 _diffrn_detector.type STOE _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2005-10-27 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator graphite _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.54 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source 'ROTATING ANODE' _diffrn_source.target ? _diffrn_source.type 'Cu FINE FOCUS' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.54 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_synchrotron_site ? # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 4XQZ _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.151 _reflns.d_resolution_low 24.8696 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 5823 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F 4 _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.9 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 1.78 _reflns.pdbx_Rmerge_I_obs 0.0612 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 6.31 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.Rmerge_I_obs 0.2463 _reflns_shell.d_res_high 2.15 _reflns_shell.d_res_low 2.25 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_sigI_obs 0.9 _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_gt ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_gt ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_redundancy 1.55 _reflns_shell.pdbx_rejects ? _reflns_shell.percent_possible_all 95.0 _reflns_shell.percent_possible_gt ? _reflns_shell.percent_possible_obs ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 4XQZ _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.151 _refine.ls_d_res_low 24.8696 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 10790 _refine.ls_number_reflns_R_free 1100 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 95.47 _refine.ls_percent_reflns_R_free 10.19 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2375 _refine.ls_R_factor_R_free 0.2997 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2306 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.42 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 4XQY _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details 'Random selection' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 35.11 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.34 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 960 _refine_hist.pdbx_number_atoms_ligand 22 _refine_hist.number_atoms_solvent 57 _refine_hist.number_atoms_total 1039 _refine_hist.d_res_high 2.151 _refine_hist.d_res_low 24.8696 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.008 ? 1080 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.080 ? 1654 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 31.176 ? 452 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.052 ? 185 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.006 ? 48 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.1515 2.2493 . . 136 1183 94.00 . . . 0.3296 . 0.2730 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.2493 2.3678 . . 138 1222 95.00 . . . 0.3706 . 0.2939 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.3678 2.5161 . . 136 1231 95.00 . . . 0.3690 . 0.2866 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.5161 2.7101 . . 131 1201 96.00 . . . 0.3518 . 0.2665 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.7101 2.9824 . . 139 1226 96.00 . . . 0.3777 . 0.2553 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.9824 3.4130 . . 139 1199 95.00 . . . 0.3226 . 0.2311 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.4130 4.2965 . . 140 1201 96.00 . . . 0.2630 . 0.1830 . . . . . . . . . . 'X-RAY DIFFRACTION' 4.2965 24.8696 . . 141 1227 97.00 . . . 0.2219 . 0.2028 . . . . . . . . . . # _struct.entry_id 4XQZ _struct.title 'Calcium(II) and copper(II) bound to the Z-DNA form of d(CGCGCG), complexed by chloride and MES' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 4XQZ _struct_keywords.text 'Z-DNA, copper(II), DNA' _struct_keywords.pdbx_keywords DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 1 ? F N N 1 ? G N N 1 ? H N N 1 ? I N N 2 ? J N N 3 ? K N N 4 ? L N N 2 ? M N N 4 ? N N N 2 ? O N N 5 ? P N N 6 ? Q N N 4 ? R N N 2 ? S N N 3 ? T N N 4 ? U N N 2 ? V N N 2 ? W N N 4 ? X N N 4 ? Y N N 4 ? Z N N 7 ? AA N N 7 ? BA N N 7 ? CA N N 7 ? DA N N 7 ? EA N N 7 ? FA N N 7 ? GA N N 7 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 4XQZ _struct_ref.pdbx_db_accession 4XQZ _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4XQZ A 1 ? 6 ? 4XQZ 1 ? 6 ? 1 6 2 1 4XQZ B 1 ? 6 ? 4XQZ 1 ? 6 ? 1 6 3 1 4XQZ C 1 ? 6 ? 4XQZ 1 ? 6 ? 1 6 4 1 4XQZ D 1 ? 6 ? 4XQZ 1 ? 6 ? 1 6 5 1 4XQZ E 1 ? 6 ? 4XQZ 1 ? 6 ? 1 6 6 1 4XQZ F 1 ? 6 ? 4XQZ 1 ? 6 ? 1 6 7 1 4XQZ G 1 ? 6 ? 4XQZ 1 ? 6 ? 1 6 8 1 4XQZ H 1 ? 6 ? 4XQZ 1 ? 6 ? 1 6 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA dimeric 2 2 author_and_software_defined_assembly PISA dimeric 2 3 author_and_software_defined_assembly PISA dimeric 2 4 author_and_software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,I,J,K,Z,AA 2 1 C,D,L,M,N,O,P,Q,BA,CA 3 1 E,F,R,S,T,DA,EA 4 1 G,H,U,V,W,X,Y,FA,GA # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A DG 2 N7 ? ? ? 1_555 I CU . CU ? ? A DG 2 A CU 101 1_555 ? ? ? ? ? ? ? 2.026 ? ? metalc2 metalc ? ? A DG 2 OP1 ? ? ? 1_555 J CA . CA ? ? A DG 2 A CA 102 1_555 ? ? ? ? ? ? ? 2.621 ? ? metalc3 metalc ? ? I CU . CU ? ? ? 1_555 K CL . CL ? ? A CU 101 A CL 103 1_555 ? ? ? ? ? ? ? 2.469 ? ? metalc4 metalc ? ? I CU . CU ? ? ? 1_555 D DG 2 N7 ? ? A CU 101 D DG 2 1_555 ? ? ? ? ? ? ? 2.001 ? ? metalc5 metalc ? ? I CU . CU ? ? ? 1_555 O MES . S ? ? A CU 101 D MES 102 1_555 ? ? ? ? ? ? ? 2.440 ? ? metalc6 metalc ? ? I CU . CU ? ? ? 1_555 O MES . O3S ? ? A CU 101 D MES 102 1_555 ? ? ? ? ? ? ? 1.857 ? ? metalc7 metalc ? ? I CU . CU ? ? ? 1_555 O MES . O1S ? ? A CU 101 D MES 102 1_555 ? ? ? ? ? ? ? 2.274 ? ? metalc8 metalc ? ? J CA . CA ? ? ? 1_555 Z HOH . O ? ? A CA 102 A HOH 201 1_555 ? ? ? ? ? ? ? 2.991 ? ? metalc9 metalc ? ? J CA . CA ? ? ? 1_555 Z HOH . O ? ? A CA 102 A HOH 202 1_555 ? ? ? ? ? ? ? 2.346 ? ? metalc10 metalc ? ? J CA . CA ? ? ? 2_545 G DG 2 OP1 ? ? A CA 102 G DG 2 1_555 ? ? ? ? ? ? ? 2.531 ? ? metalc11 metalc ? ? J CA . CA ? ? ? 1_555 H DG 4 OP1 ? ? A CA 102 H DG 4 1_555 ? ? ? ? ? ? ? 2.576 ? ? metalc12 metalc ? ? B DG 2 N7 ? ? ? 1_555 L CU . CU ? ? B DG 2 C CU 101 1_555 ? ? ? ? ? ? ? 1.920 ? ? metalc13 metalc ? ? AA HOH . O ? ? ? 1_555 L CU . CU ? ? B HOH 108 C CU 101 1_555 ? ? ? ? ? ? ? 2.308 ? ? metalc14 metalc ? ? C DG 2 N7 ? ? ? 1_555 L CU . CU ? ? C DG 2 C CU 101 1_555 ? ? ? ? ? ? ? 1.984 ? ? metalc15 metalc ? ? C DG 2 OP2 ? ? ? 1_555 S CA . CA ? ? C DG 2 E CA 102 2_656 ? ? ? ? ? ? ? 2.531 ? ? metalc16 metalc ? ? C DG 4 N7 ? ? ? 1_555 N CU . CU ? ? C DG 4 D CU 101 2_646 ? ? ? ? ? ? ? 2.083 ? ? metalc17 metalc ? ? BA HOH . O ? ? ? 2_656 N CU . CU ? ? C HOH 205 D CU 101 1_555 ? ? ? ? ? ? ? 2.522 ? ? metalc18 metalc ? ? D DC 3 OP1 ? ? ? 1_555 S CA . CA ? ? D DC 3 E CA 102 1_565 ? ? ? ? ? ? ? 2.416 ? ? metalc19 metalc ? ? D DG 6 N7 ? ? ? 1_555 N CU . CU ? ? D DG 6 D CU 101 1_555 ? ? ? ? ? ? ? 1.935 ? ? metalc20 metalc ? ? N CU . CU ? ? ? 1_555 CA HOH . O ? ? D CU 101 D HOH 203 1_555 ? ? ? ? ? ? ? 2.053 ? ? metalc21 metalc ? ? E DG 2 N7 ? ? ? 1_555 R CU . CU ? ? E DG 2 E CU 101 1_555 ? ? ? ? ? ? ? 2.163 ? ? metalc22 metalc ? ? E DG 2 OP1 ? ? ? 1_555 S CA . CA ? ? E DG 2 E CA 102 1_555 ? ? ? ? ? ? ? 2.825 ? ? metalc23 metalc ? ? R CU . CU ? ? ? 1_555 H DG 2 N7 ? ? E CU 101 H DG 2 1_555 ? ? ? ? ? ? ? 2.076 ? ? metalc24 metalc ? ? R CU . CU ? ? ? 1_555 Y CL . CL ? ? E CU 101 H CL 104 1_555 ? ? ? ? ? ? ? 2.590 ? ? metalc25 metalc ? ? R CU . CU ? ? ? 1_555 GA HOH . O ? ? E CU 101 H HOH 208 1_555 ? ? ? ? ? ? ? 2.284 ? ? metalc26 metalc ? ? S CA . CA ? ? ? 1_555 DA HOH . O ? ? E CA 102 E HOH 202 1_555 ? ? ? ? ? ? ? 2.425 ? ? metalc27 metalc ? ? F DG 2 N7 ? ? ? 1_555 U CU . CU ? ? F DG 2 G CU 101 1_555 ? ? ? ? ? ? ? 2.028 ? ? metalc28 metalc ? ? T CL . CL ? ? ? 1_555 U CU . CU ? ? F CL 101 G CU 101 1_555 ? ? ? ? ? ? ? 2.668 ? ? metalc29 metalc ? ? EA HOH . O ? ? ? 1_555 U CU . CU ? ? F HOH 206 G CU 101 1_555 ? ? ? ? ? ? ? 2.576 ? ? metalc30 metalc ? ? G DG 2 N7 ? ? ? 1_555 U CU . CU ? ? G DG 2 G CU 101 1_555 ? ? ? ? ? ? ? 1.850 ? ? metalc31 metalc ? ? G DG 4 N7 ? ? ? 1_555 V CU . CU ? ? G DG 4 H CU 101 2_545 ? ? ? ? ? ? ? 2.024 ? ? metalc32 metalc ? ? FA HOH . O ? ? ? 2_555 V CU . CU ? ? G HOH 202 H CU 101 1_555 ? ? ? ? ? ? ? 2.307 ? ? metalc33 metalc ? ? H DG 6 N7 ? ? ? 1_555 V CU . CU ? ? H DG 6 H CU 101 1_555 ? ? ? ? ? ? ? 2.042 ? ? metalc34 metalc ? ? V CU . CU ? ? ? 1_555 W CL . CL ? ? H CU 101 H CL 102 1_555 ? ? ? ? ? ? ? 2.526 ? ? hydrog1 hydrog ? ? A DC 1 N3 ? ? ? 1_555 B DG 6 N1 ? ? A DC 1 B DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DC 1 N4 ? ? ? 1_555 B DG 6 O6 ? ? A DC 1 B DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DC 1 O2 ? ? ? 1_555 B DG 6 N2 ? ? A DC 1 B DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DG 2 N1 ? ? ? 1_555 B DC 5 N3 ? ? A DG 2 B DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DG 2 N2 ? ? ? 1_555 B DC 5 O2 ? ? A DG 2 B DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DG 2 O6 ? ? ? 1_555 B DC 5 N4 ? ? A DG 2 B DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DC 3 N3 ? ? ? 1_555 B DG 4 N1 ? ? A DC 3 B DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DC 3 N4 ? ? ? 1_555 B DG 4 O6 ? ? A DC 3 B DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DC 3 O2 ? ? ? 1_555 B DG 4 N2 ? ? A DC 3 B DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DG 4 N1 ? ? ? 1_555 B DC 3 N3 ? ? A DG 4 B DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DG 4 N2 ? ? ? 1_555 B DC 3 O2 ? ? A DG 4 B DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DG 4 O6 ? ? ? 1_555 B DC 3 N4 ? ? A DG 4 B DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DC 5 N3 ? ? ? 1_555 B DG 2 N1 ? ? A DC 5 B DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DC 5 N4 ? ? ? 1_555 B DG 2 O6 ? ? A DC 5 B DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DC 5 O2 ? ? ? 1_555 B DG 2 N2 ? ? A DC 5 B DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DG 6 N1 ? ? ? 1_555 B DC 1 N3 ? ? A DG 6 B DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DG 6 N2 ? ? ? 1_555 B DC 1 O2 ? ? A DG 6 B DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DG 6 O6 ? ? ? 1_555 B DC 1 N4 ? ? A DG 6 B DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? C DC 1 N3 ? ? ? 1_555 D DG 6 N1 ? ? C DC 1 D DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? C DC 1 N4 ? ? ? 1_555 D DG 6 O6 ? ? C DC 1 D DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? C DC 1 O2 ? ? ? 1_555 D DG 6 N2 ? ? C DC 1 D DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? C DG 2 N1 ? ? ? 1_555 D DC 5 N3 ? ? C DG 2 D DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? C DG 2 N2 ? ? ? 1_555 D DC 5 O2 ? ? C DG 2 D DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? C DG 2 O6 ? ? ? 1_555 D DC 5 N4 ? ? C DG 2 D DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? C DC 3 N3 ? ? ? 1_555 D DG 4 N1 ? ? C DC 3 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? C DC 3 N4 ? ? ? 1_555 D DG 4 O6 ? ? C DC 3 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? C DC 3 O2 ? ? ? 1_555 D DG 4 N2 ? ? C DC 3 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? C DG 4 N1 ? ? ? 1_555 D DC 3 N3 ? ? C DG 4 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? C DG 4 N2 ? ? ? 1_555 D DC 3 O2 ? ? C DG 4 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? C DG 4 O6 ? ? ? 1_555 D DC 3 N4 ? ? C DG 4 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? C DC 5 N3 ? ? ? 1_555 D DG 2 N1 ? ? C DC 5 D DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? C DC 5 N4 ? ? ? 1_555 D DG 2 O6 ? ? C DC 5 D DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? C DC 5 O2 ? ? ? 1_555 D DG 2 N2 ? ? C DC 5 D DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? C DG 6 N1 ? ? ? 1_555 D DC 1 N3 ? ? C DG 6 D DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? C DG 6 N2 ? ? ? 1_555 D DC 1 O2 ? ? C DG 6 D DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? C DG 6 O6 ? ? ? 1_555 D DC 1 N4 ? ? C DG 6 D DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? E DC 1 N3 ? ? ? 1_555 F DG 6 N1 ? ? E DC 1 F DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? E DC 1 N4 ? ? ? 1_555 F DG 6 O6 ? ? E DC 1 F DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? E DC 1 O2 ? ? ? 1_555 F DG 6 N2 ? ? E DC 1 F DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? E DG 2 N1 ? ? ? 1_555 F DC 5 N3 ? ? E DG 2 F DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? E DG 2 N2 ? ? ? 1_555 F DC 5 O2 ? ? E DG 2 F DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? E DG 2 O6 ? ? ? 1_555 F DC 5 N4 ? ? E DG 2 F DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? E DC 3 N3 ? ? ? 1_555 F DG 4 N1 ? ? E DC 3 F DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? E DC 3 N4 ? ? ? 1_555 F DG 4 O6 ? ? E DC 3 F DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? E DC 3 O2 ? ? ? 1_555 F DG 4 N2 ? ? E DC 3 F DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? E DG 4 N1 ? ? ? 1_555 F DC 3 N3 ? ? E DG 4 F DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? E DG 4 N2 ? ? ? 1_555 F DC 3 O2 ? ? E DG 4 F DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? E DG 4 O6 ? ? ? 1_555 F DC 3 N4 ? ? E DG 4 F DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? E DC 5 N3 ? ? ? 1_555 F DG 2 N1 ? ? E DC 5 F DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? E DC 5 N4 ? ? ? 1_555 F DG 2 O6 ? ? E DC 5 F DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? E DC 5 O2 ? ? ? 1_555 F DG 2 N2 ? ? E DC 5 F DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? E DG 6 N1 ? ? ? 1_555 F DC 1 N3 ? ? E DG 6 F DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? E DG 6 N2 ? ? ? 1_555 F DC 1 O2 ? ? E DG 6 F DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? E DG 6 O6 ? ? ? 1_555 F DC 1 N4 ? ? E DG 6 F DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? G DC 1 N3 ? ? ? 1_555 H DG 6 N1 ? ? G DC 1 H DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? G DC 1 N4 ? ? ? 1_555 H DG 6 O6 ? ? G DC 1 H DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? G DC 1 O2 ? ? ? 1_555 H DG 6 N2 ? ? G DC 1 H DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? G DG 2 N1 ? ? ? 1_555 H DC 5 N3 ? ? G DG 2 H DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? G DG 2 N2 ? ? ? 1_555 H DC 5 O2 ? ? G DG 2 H DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? G DG 2 O6 ? ? ? 1_555 H DC 5 N4 ? ? G DG 2 H DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? G DC 3 N3 ? ? ? 1_555 H DG 4 N1 ? ? G DC 3 H DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? G DC 3 N4 ? ? ? 1_555 H DG 4 O6 ? ? G DC 3 H DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? G DC 3 O2 ? ? ? 1_555 H DG 4 N2 ? ? G DC 3 H DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? G DG 4 N1 ? ? ? 1_555 H DC 3 N3 ? ? G DG 4 H DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? G DG 4 N2 ? ? ? 1_555 H DC 3 O2 ? ? G DG 4 H DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? G DG 4 O6 ? ? ? 1_555 H DC 3 N4 ? ? G DG 4 H DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? G DC 5 N3 ? ? ? 1_555 H DG 2 N1 ? ? G DC 5 H DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? G DC 5 N4 ? ? ? 1_555 H DG 2 O6 ? ? G DC 5 H DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog69 hydrog ? ? G DC 5 O2 ? ? ? 1_555 H DG 2 N2 ? ? G DC 5 H DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog70 hydrog ? ? G DG 6 N1 ? ? ? 1_555 H DC 1 N3 ? ? G DG 6 H DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog71 hydrog ? ? G DG 6 N2 ? ? ? 1_555 H DC 1 O2 ? ? G DG 6 H DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog72 hydrog ? ? G DG 6 O6 ? ? ? 1_555 H DC 1 N4 ? ? G DG 6 H DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 N7 ? A DG 2 ? A DG 2 ? 1_555 CU ? I CU . ? A CU 101 ? 1_555 CL ? K CL . ? A CL 103 ? 1_555 80.9 ? 2 N7 ? A DG 2 ? A DG 2 ? 1_555 CU ? I CU . ? A CU 101 ? 1_555 N7 ? D DG 2 ? D DG 2 ? 1_555 162.6 ? 3 CL ? K CL . ? A CL 103 ? 1_555 CU ? I CU . ? A CU 101 ? 1_555 N7 ? D DG 2 ? D DG 2 ? 1_555 82.9 ? 4 N7 ? A DG 2 ? A DG 2 ? 1_555 CU ? I CU . ? A CU 101 ? 1_555 S ? O MES . ? D MES 102 ? 1_555 96.3 ? 5 CL ? K CL . ? A CL 103 ? 1_555 CU ? I CU . ? A CU 101 ? 1_555 S ? O MES . ? D MES 102 ? 1_555 157.1 ? 6 N7 ? D DG 2 ? D DG 2 ? 1_555 CU ? I CU . ? A CU 101 ? 1_555 S ? O MES . ? D MES 102 ? 1_555 101.0 ? 7 N7 ? A DG 2 ? A DG 2 ? 1_555 CU ? I CU . ? A CU 101 ? 1_555 O3S ? O MES . ? D MES 102 ? 1_555 96.4 ? 8 CL ? K CL . ? A CL 103 ? 1_555 CU ? I CU . ? A CU 101 ? 1_555 O3S ? O MES . ? D MES 102 ? 1_555 119.8 ? 9 N7 ? D DG 2 ? D DG 2 ? 1_555 CU ? I CU . ? A CU 101 ? 1_555 O3S ? O MES . ? D MES 102 ? 1_555 97.1 ? 10 S ? O MES . ? D MES 102 ? 1_555 CU ? I CU . ? A CU 101 ? 1_555 O3S ? O MES . ? D MES 102 ? 1_555 37.7 ? 11 N7 ? A DG 2 ? A DG 2 ? 1_555 CU ? I CU . ? A CU 101 ? 1_555 O1S ? O MES . ? D MES 102 ? 1_555 85.0 ? 12 CL ? K CL . ? A CL 103 ? 1_555 CU ? I CU . ? A CU 101 ? 1_555 O1S ? O MES . ? D MES 102 ? 1_555 161.5 ? 13 N7 ? D DG 2 ? D DG 2 ? 1_555 CU ? I CU . ? A CU 101 ? 1_555 O1S ? O MES . ? D MES 102 ? 1_555 109.4 ? 14 S ? O MES . ? D MES 102 ? 1_555 CU ? I CU . ? A CU 101 ? 1_555 O1S ? O MES . ? D MES 102 ? 1_555 36.7 ? 15 O3S ? O MES . ? D MES 102 ? 1_555 CU ? I CU . ? A CU 101 ? 1_555 O1S ? O MES . ? D MES 102 ? 1_555 73.6 ? 16 OP1 ? A DG 2 ? A DG 2 ? 1_555 CA ? J CA . ? A CA 102 ? 1_555 O ? Z HOH . ? A HOH 201 ? 1_555 71.1 ? 17 OP1 ? A DG 2 ? A DG 2 ? 1_555 CA ? J CA . ? A CA 102 ? 1_555 O ? Z HOH . ? A HOH 202 ? 1_555 65.0 ? 18 O ? Z HOH . ? A HOH 201 ? 1_555 CA ? J CA . ? A CA 102 ? 1_555 O ? Z HOH . ? A HOH 202 ? 1_555 130.0 ? 19 OP1 ? A DG 2 ? A DG 2 ? 1_555 CA ? J CA . ? A CA 102 ? 1_555 OP1 ? G DG 2 ? G DG 2 ? 1_555 146.7 ? 20 O ? Z HOH . ? A HOH 201 ? 1_555 CA ? J CA . ? A CA 102 ? 1_555 OP1 ? G DG 2 ? G DG 2 ? 1_555 135.5 ? 21 O ? Z HOH . ? A HOH 202 ? 1_555 CA ? J CA . ? A CA 102 ? 1_555 OP1 ? G DG 2 ? G DG 2 ? 1_555 94.4 ? 22 OP1 ? A DG 2 ? A DG 2 ? 1_555 CA ? J CA . ? A CA 102 ? 1_555 OP1 ? H DG 4 ? H DG 4 ? 1_555 120.3 ? 23 O ? Z HOH . ? A HOH 201 ? 1_555 CA ? J CA . ? A CA 102 ? 1_555 OP1 ? H DG 4 ? H DG 4 ? 1_555 110.4 ? 24 O ? Z HOH . ? A HOH 202 ? 1_555 CA ? J CA . ? A CA 102 ? 1_555 OP1 ? H DG 4 ? H DG 4 ? 1_555 111.7 ? 25 OP1 ? G DG 2 ? G DG 2 ? 1_555 CA ? J CA . ? A CA 102 ? 1_555 OP1 ? H DG 4 ? H DG 4 ? 1_555 40.9 ? 26 N7 ? B DG 2 ? B DG 2 ? 1_555 CU ? L CU . ? C CU 101 ? 1_555 O ? AA HOH . ? B HOH 108 ? 1_555 97.8 ? 27 N7 ? B DG 2 ? B DG 2 ? 1_555 CU ? L CU . ? C CU 101 ? 1_555 N7 ? C DG 2 ? C DG 2 ? 1_555 154.9 ? 28 O ? AA HOH . ? B HOH 108 ? 1_555 CU ? L CU . ? C CU 101 ? 1_555 N7 ? C DG 2 ? C DG 2 ? 1_555 105.7 ? 29 OP2 ? C DG 2 ? C DG 2 ? 1_555 CA ? S CA . ? E CA 102 ? 2_656 OP1 ? D DC 3 ? D DC 3 ? 1_555 35.1 ? 30 OP2 ? C DG 2 ? C DG 2 ? 1_555 CA ? S CA . ? E CA 102 ? 2_656 OP1 ? E DG 2 ? E DG 2 ? 1_555 124.5 ? 31 OP1 ? D DC 3 ? D DC 3 ? 1_555 CA ? S CA . ? E CA 102 ? 2_656 OP1 ? E DG 2 ? E DG 2 ? 1_555 95.0 ? 32 OP2 ? C DG 2 ? C DG 2 ? 1_555 CA ? S CA . ? E CA 102 ? 2_656 O ? DA HOH . ? E HOH 202 ? 1_555 131.3 ? 33 OP1 ? D DC 3 ? D DC 3 ? 1_555 CA ? S CA . ? E CA 102 ? 2_656 O ? DA HOH . ? E HOH 202 ? 1_555 102.0 ? 34 OP1 ? E DG 2 ? E DG 2 ? 1_555 CA ? S CA . ? E CA 102 ? 2_656 O ? DA HOH . ? E HOH 202 ? 1_555 7.0 ? 35 N7 ? C DG 4 ? C DG 4 ? 1_555 CU ? N CU . ? D CU 101 ? 2_646 O ? BA HOH . ? C HOH 205 ? 2_656 59.4 ? 36 N7 ? C DG 4 ? C DG 4 ? 1_555 CU ? N CU . ? D CU 101 ? 2_646 N7 ? D DG 6 ? D DG 6 ? 1_555 58.8 ? 37 O ? BA HOH . ? C HOH 205 ? 2_656 CU ? N CU . ? D CU 101 ? 2_646 N7 ? D DG 6 ? D DG 6 ? 1_555 2.3 ? 38 N7 ? C DG 4 ? C DG 4 ? 1_555 CU ? N CU . ? D CU 101 ? 2_646 O ? CA HOH . ? D HOH 203 ? 1_555 57.0 ? 39 O ? BA HOH . ? C HOH 205 ? 2_656 CU ? N CU . ? D CU 101 ? 2_646 O ? CA HOH . ? D HOH 203 ? 1_555 5.0 ? 40 N7 ? D DG 6 ? D DG 6 ? 1_555 CU ? N CU . ? D CU 101 ? 2_646 O ? CA HOH . ? D HOH 203 ? 1_555 6.8 ? 41 N7 ? E DG 2 ? E DG 2 ? 1_555 CU ? R CU . ? E CU 101 ? 1_555 N7 ? H DG 2 ? H DG 2 ? 1_555 132.1 ? 42 N7 ? E DG 2 ? E DG 2 ? 1_555 CU ? R CU . ? E CU 101 ? 1_555 CL ? Y CL . ? H CL 104 ? 1_555 104.4 ? 43 N7 ? H DG 2 ? H DG 2 ? 1_555 CU ? R CU . ? E CU 101 ? 1_555 CL ? Y CL . ? H CL 104 ? 1_555 74.6 ? 44 N7 ? E DG 2 ? E DG 2 ? 1_555 CU ? R CU . ? E CU 101 ? 1_555 O ? GA HOH . ? H HOH 208 ? 1_555 98.0 ? 45 N7 ? H DG 2 ? H DG 2 ? 1_555 CU ? R CU . ? E CU 101 ? 1_555 O ? GA HOH . ? H HOH 208 ? 1_555 95.1 ? 46 CL ? Y CL . ? H CL 104 ? 1_555 CU ? R CU . ? E CU 101 ? 1_555 O ? GA HOH . ? H HOH 208 ? 1_555 156.8 ? 47 N7 ? F DG 2 ? F DG 2 ? 1_555 CU ? U CU . ? G CU 101 ? 1_555 CL ? T CL . ? F CL 101 ? 1_555 82.7 ? 48 N7 ? F DG 2 ? F DG 2 ? 1_555 CU ? U CU . ? G CU 101 ? 1_555 O ? EA HOH . ? F HOH 206 ? 1_555 101.3 ? 49 CL ? T CL . ? F CL 101 ? 1_555 CU ? U CU . ? G CU 101 ? 1_555 O ? EA HOH . ? F HOH 206 ? 1_555 101.9 ? 50 N7 ? F DG 2 ? F DG 2 ? 1_555 CU ? U CU . ? G CU 101 ? 1_555 N7 ? G DG 2 ? G DG 2 ? 1_555 153.3 ? 51 CL ? T CL . ? F CL 101 ? 1_555 CU ? U CU . ? G CU 101 ? 1_555 N7 ? G DG 2 ? G DG 2 ? 1_555 102.9 ? 52 O ? EA HOH . ? F HOH 206 ? 1_555 CU ? U CU . ? G CU 101 ? 1_555 N7 ? G DG 2 ? G DG 2 ? 1_555 103.1 ? 53 N7 ? G DG 4 ? G DG 4 ? 1_555 CU ? V CU . ? H CU 101 ? 2_545 O ? FA HOH . ? G HOH 202 ? 2_555 54.2 ? 54 N7 ? G DG 4 ? G DG 4 ? 1_555 CU ? V CU . ? H CU 101 ? 2_545 N7 ? H DG 6 ? H DG 6 ? 1_555 56.6 ? 55 O ? FA HOH . ? G HOH 202 ? 2_555 CU ? V CU . ? H CU 101 ? 2_545 N7 ? H DG 6 ? H DG 6 ? 1_555 6.7 ? 56 N7 ? G DG 4 ? G DG 4 ? 1_555 CU ? V CU . ? H CU 101 ? 2_545 CL ? W CL . ? H CL 102 ? 1_555 60.2 ? 57 O ? FA HOH . ? G HOH 202 ? 2_555 CU ? V CU . ? H CU 101 ? 2_545 CL ? W CL . ? H CL 102 ? 1_555 8.4 ? 58 N7 ? H DG 6 ? H DG 6 ? 1_555 CU ? V CU . ? H CU 101 ? 2_545 CL ? W CL . ? H CL 102 ? 1_555 3.6 ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A CU 101 ? 5 'binding site for residue CU A 101' AC2 Software A CA 102 ? 4 'binding site for residue CA A 102' AC3 Software A CL 103 ? 5 'binding site for residue CL A 103' AC4 Software C CU 101 ? 5 'binding site for residue CU C 101' AC5 Software C CL 102 ? 4 'binding site for residue CL C 102' AC6 Software D CU 101 ? 2 'binding site for residue CU D 101' AC7 Software D MES 102 ? 6 'binding site for residue MES D 102' AC8 Software D CL 104 ? 5 'binding site for residue CL D 104' AC9 Software E CU 101 ? 4 'binding site for residue CU E 101' AD1 Software E CA 102 ? 3 'binding site for residue CA E 102' AD2 Software F CL 101 ? 4 'binding site for residue CL F 101' AD3 Software G CU 101 ? 5 'binding site for residue CU G 101' AD4 Software H CU 101 ? 3 'binding site for residue CU H 101' AD5 Software H CL 102 ? 3 'binding site for residue CL H 102' AD6 Software H CL 103 ? 3 'binding site for residue CL H 103' AD7 Software H CL 104 ? 3 'binding site for residue CL H 104' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 DG A 2 ? DG A 2 . ? 1_555 ? 2 AC1 5 CL K . ? CL A 103 . ? 1_555 ? 3 AC1 5 DG D 2 ? DG D 2 . ? 1_555 ? 4 AC1 5 MES O . ? MES D 102 . ? 1_555 ? 5 AC1 5 CL Q . ? CL D 104 . ? 1_555 ? 6 AC2 4 DG A 2 ? DG A 2 . ? 1_555 ? 7 AC2 4 HOH Z . ? HOH A 201 . ? 1_555 ? 8 AC2 4 HOH Z . ? HOH A 202 . ? 1_555 ? 9 AC2 4 DG H 4 ? DG H 4 . ? 1_555 ? 10 AC3 5 DG A 2 ? DG A 2 . ? 1_555 ? 11 AC3 5 DC A 3 ? DC A 3 . ? 1_555 ? 12 AC3 5 CU I . ? CU A 101 . ? 1_555 ? 13 AC3 5 DG D 2 ? DG D 2 . ? 1_555 ? 14 AC3 5 CL Q . ? CL D 104 . ? 1_555 ? 15 AC4 5 DG B 2 ? DG B 2 . ? 1_555 ? 16 AC4 5 HOH AA . ? HOH B 105 . ? 1_555 ? 17 AC4 5 HOH AA . ? HOH B 108 . ? 1_555 ? 18 AC4 5 DG C 2 ? DG C 2 . ? 1_555 ? 19 AC4 5 CL M . ? CL C 102 . ? 1_555 ? 20 AC5 4 DC B 1 ? DC B 1 . ? 1_555 ? 21 AC5 4 HOH AA . ? HOH B 108 . ? 1_555 ? 22 AC5 4 DC C 1 ? DC C 1 . ? 1_555 ? 23 AC5 4 CU L . ? CU C 101 . ? 1_555 ? 24 AC6 2 DG D 6 ? DG D 6 . ? 1_555 ? 25 AC6 2 HOH CA . ? HOH D 203 . ? 1_555 ? 26 AC7 6 DC A 1 ? DC A 1 . ? 1_555 ? 27 AC7 6 DG A 2 ? DG A 2 . ? 1_555 ? 28 AC7 6 CU I . ? CU A 101 . ? 1_555 ? 29 AC7 6 DC D 1 ? DC D 1 . ? 1_555 ? 30 AC7 6 DG D 2 ? DG D 2 . ? 1_555 ? 31 AC7 6 CL Q . ? CL D 104 . ? 1_555 ? 32 AC8 5 CU I . ? CU A 101 . ? 1_555 ? 33 AC8 5 CL K . ? CL A 103 . ? 1_555 ? 34 AC8 5 DG D 2 ? DG D 2 . ? 1_555 ? 35 AC8 5 DC D 3 ? DC D 3 . ? 1_555 ? 36 AC8 5 MES O . ? MES D 102 . ? 1_555 ? 37 AC9 4 DG E 2 ? DG E 2 . ? 1_555 ? 38 AC9 4 DG H 2 ? DG H 2 . ? 1_555 ? 39 AC9 4 CL Y . ? CL H 104 . ? 1_555 ? 40 AC9 4 HOH GA . ? HOH H 208 . ? 1_555 ? 41 AD1 3 DC D 3 ? DC D 3 . ? 1_545 ? 42 AD1 3 DG E 2 ? DG E 2 . ? 1_555 ? 43 AD1 3 HOH DA . ? HOH E 202 . ? 1_555 ? 44 AD2 4 DG F 2 ? DG F 2 . ? 1_555 ? 45 AD2 4 DC F 3 ? DC F 3 . ? 1_555 ? 46 AD2 4 DG G 2 ? DG G 2 . ? 1_555 ? 47 AD2 4 CU U . ? CU G 101 . ? 1_555 ? 48 AD3 5 DC F 1 ? DC F 1 . ? 1_555 ? 49 AD3 5 DG F 2 ? DG F 2 . ? 1_555 ? 50 AD3 5 CL T . ? CL F 101 . ? 1_555 ? 51 AD3 5 HOH EA . ? HOH F 206 . ? 1_555 ? 52 AD3 5 DG G 2 ? DG G 2 . ? 1_555 ? 53 AD4 3 DG H 6 ? DG H 6 . ? 1_555 ? 54 AD4 3 CL W . ? CL H 102 . ? 1_555 ? 55 AD4 3 CL X . ? CL H 103 . ? 1_555 ? 56 AD5 3 DG H 6 ? DG H 6 . ? 1_555 ? 57 AD5 3 CU V . ? CU H 101 . ? 1_555 ? 58 AD5 3 CL X . ? CL H 103 . ? 1_555 ? 59 AD6 3 DG H 6 ? DG H 6 . ? 1_555 ? 60 AD6 3 CU V . ? CU H 101 . ? 1_555 ? 61 AD6 3 CL W . ? CL H 102 . ? 1_555 ? 62 AD7 3 CU R . ? CU E 101 . ? 1_555 ? 63 AD7 3 DG H 2 ? DG H 2 . ? 1_555 ? 64 AD7 3 DC H 3 ? DC H 3 . ? 1_555 ? # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 "O3'" _pdbx_validate_rmsd_bond.auth_asym_id_1 G _pdbx_validate_rmsd_bond.auth_comp_id_1 DG _pdbx_validate_rmsd_bond.auth_seq_id_1 2 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 "C3'" _pdbx_validate_rmsd_bond.auth_asym_id_2 G _pdbx_validate_rmsd_bond.auth_comp_id_2 DG _pdbx_validate_rmsd_bond.auth_seq_id_2 2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.376 _pdbx_validate_rmsd_bond.bond_target_value 1.419 _pdbx_validate_rmsd_bond.bond_deviation -0.043 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.006 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" B DC 1 ? ? "C1'" B DC 1 ? ? N1 B DC 1 ? ? 111.03 108.30 2.73 0.30 N 2 1 "O4'" F DC 1 ? ? "C1'" F DC 1 ? ? N1 F DC 1 ? ? 110.37 108.30 2.07 0.30 N 3 1 "O4'" G DC 5 ? ? "C1'" G DC 5 ? ? N1 G DC 5 ? ? 110.26 108.30 1.96 0.30 N # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal CA CA CA N N 1 CL CL CL N N 2 CU CU CU N N 3 DC OP3 O N N 4 DC P P N N 5 DC OP1 O N N 6 DC OP2 O N N 7 DC "O5'" O N N 8 DC "C5'" C N N 9 DC "C4'" C N R 10 DC "O4'" O N N 11 DC "C3'" C N S 12 DC "O3'" O N N 13 DC "C2'" C N N 14 DC "C1'" C N R 15 DC N1 N N N 16 DC C2 C N N 17 DC O2 O N N 18 DC N3 N N N 19 DC C4 C N N 20 DC N4 N N N 21 DC C5 C N N 22 DC C6 C N N 23 DC HOP3 H N N 24 DC HOP2 H N N 25 DC "H5'" H N N 26 DC "H5''" H N N 27 DC "H4'" H N N 28 DC "H3'" H N N 29 DC "HO3'" H N N 30 DC "H2'" H N N 31 DC "H2''" H N N 32 DC "H1'" H N N 33 DC H41 H N N 34 DC H42 H N N 35 DC H5 H N N 36 DC H6 H N N 37 DG OP3 O N N 38 DG P P N N 39 DG OP1 O N N 40 DG OP2 O N N 41 DG "O5'" O N N 42 DG "C5'" C N N 43 DG "C4'" C N R 44 DG "O4'" O N N 45 DG "C3'" C N S 46 DG "O3'" O N N 47 DG "C2'" C N N 48 DG "C1'" C N R 49 DG N9 N Y N 50 DG C8 C Y N 51 DG N7 N Y N 52 DG C5 C Y N 53 DG C6 C N N 54 DG O6 O N N 55 DG N1 N N N 56 DG C2 C N N 57 DG N2 N N N 58 DG N3 N N N 59 DG C4 C Y N 60 DG HOP3 H N N 61 DG HOP2 H N N 62 DG "H5'" H N N 63 DG "H5''" H N N 64 DG "H4'" H N N 65 DG "H3'" H N N 66 DG "HO3'" H N N 67 DG "H2'" H N N 68 DG "H2''" H N N 69 DG "H1'" H N N 70 DG H8 H N N 71 DG H1 H N N 72 DG H21 H N N 73 DG H22 H N N 74 HOH O O N N 75 HOH H1 H N N 76 HOH H2 H N N 77 MES O1 O N N 78 MES C2 C N N 79 MES C3 C N N 80 MES N4 N N N 81 MES C5 C N N 82 MES C6 C N N 83 MES C7 C N N 84 MES C8 C N N 85 MES S S N N 86 MES O1S O N N 87 MES O2S O N N 88 MES O3S O N N 89 MES H21 H N N 90 MES H22 H N N 91 MES H31 H N N 92 MES H32 H N N 93 MES HN4 H N N 94 MES H51 H N N 95 MES H52 H N N 96 MES H61 H N N 97 MES H62 H N N 98 MES H71 H N N 99 MES H72 H N N 100 MES H81 H N N 101 MES H82 H N N 102 MOH C C N N 103 MOH O O N N 104 MOH H1 H N N 105 MOH H2 H N N 106 MOH H3 H N N 107 MOH HO H N N 108 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DC OP3 P sing N N 1 DC OP3 HOP3 sing N N 2 DC P OP1 doub N N 3 DC P OP2 sing N N 4 DC P "O5'" sing N N 5 DC OP2 HOP2 sing N N 6 DC "O5'" "C5'" sing N N 7 DC "C5'" "C4'" sing N N 8 DC "C5'" "H5'" sing N N 9 DC "C5'" "H5''" sing N N 10 DC "C4'" "O4'" sing N N 11 DC "C4'" "C3'" sing N N 12 DC "C4'" "H4'" sing N N 13 DC "O4'" "C1'" sing N N 14 DC "C3'" "O3'" sing N N 15 DC "C3'" "C2'" sing N N 16 DC "C3'" "H3'" sing N N 17 DC "O3'" "HO3'" sing N N 18 DC "C2'" "C1'" sing N N 19 DC "C2'" "H2'" sing N N 20 DC "C2'" "H2''" sing N N 21 DC "C1'" N1 sing N N 22 DC "C1'" "H1'" sing N N 23 DC N1 C2 sing N N 24 DC N1 C6 sing N N 25 DC C2 O2 doub N N 26 DC C2 N3 sing N N 27 DC N3 C4 doub N N 28 DC C4 N4 sing N N 29 DC C4 C5 sing N N 30 DC N4 H41 sing N N 31 DC N4 H42 sing N N 32 DC C5 C6 doub N N 33 DC C5 H5 sing N N 34 DC C6 H6 sing N N 35 DG OP3 P sing N N 36 DG OP3 HOP3 sing N N 37 DG P OP1 doub N N 38 DG P OP2 sing N N 39 DG P "O5'" sing N N 40 DG OP2 HOP2 sing N N 41 DG "O5'" "C5'" sing N N 42 DG "C5'" "C4'" sing N N 43 DG "C5'" "H5'" sing N N 44 DG "C5'" "H5''" sing N N 45 DG "C4'" "O4'" sing N N 46 DG "C4'" "C3'" sing N N 47 DG "C4'" "H4'" sing N N 48 DG "O4'" "C1'" sing N N 49 DG "C3'" "O3'" sing N N 50 DG "C3'" "C2'" sing N N 51 DG "C3'" "H3'" sing N N 52 DG "O3'" "HO3'" sing N N 53 DG "C2'" "C1'" sing N N 54 DG "C2'" "H2'" sing N N 55 DG "C2'" "H2''" sing N N 56 DG "C1'" N9 sing N N 57 DG "C1'" "H1'" sing N N 58 DG N9 C8 sing Y N 59 DG N9 C4 sing Y N 60 DG C8 N7 doub Y N 61 DG C8 H8 sing N N 62 DG N7 C5 sing Y N 63 DG C5 C6 sing N N 64 DG C5 C4 doub Y N 65 DG C6 O6 doub N N 66 DG C6 N1 sing N N 67 DG N1 C2 sing N N 68 DG N1 H1 sing N N 69 DG C2 N2 sing N N 70 DG C2 N3 doub N N 71 DG N2 H21 sing N N 72 DG N2 H22 sing N N 73 DG N3 C4 sing N N 74 HOH O H1 sing N N 75 HOH O H2 sing N N 76 MES O1 C2 sing N N 77 MES O1 C6 sing N N 78 MES C2 C3 sing N N 79 MES C2 H21 sing N N 80 MES C2 H22 sing N N 81 MES C3 N4 sing N N 82 MES C3 H31 sing N N 83 MES C3 H32 sing N N 84 MES N4 C5 sing N N 85 MES N4 C7 sing N N 86 MES N4 HN4 sing N N 87 MES C5 C6 sing N N 88 MES C5 H51 sing N N 89 MES C5 H52 sing N N 90 MES C6 H61 sing N N 91 MES C6 H62 sing N N 92 MES C7 C8 sing N N 93 MES C7 H71 sing N N 94 MES C7 H72 sing N N 95 MES C8 S sing N N 96 MES C8 H81 sing N N 97 MES C8 H82 sing N N 98 MES S O1S doub N N 99 MES S O2S doub N N 100 MES S O3S sing N N 101 MOH C O sing N N 102 MOH C H1 sing N N 103 MOH C H2 sing N N 104 MOH C H3 sing N N 105 MOH O HO sing N N 106 # _ndb_struct_conf_na.entry_id 4XQZ _ndb_struct_conf_na.feature 'z-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DC 1 1_555 B DG 6 1_555 -0.125 0.242 0.292 7.100 0.084 2.397 1 A_DC1:DG6_B A 1 ? B 6 ? 19 1 1 A DG 2 1_555 B DC 5 1_555 0.240 0.122 0.237 -3.828 9.682 -1.326 2 A_DG2:DC5_B A 2 ? B 5 ? 19 1 1 A DC 3 1_555 B DG 4 1_555 -0.383 -0.049 0.044 0.516 -10.574 0.577 3 A_DC3:DG4_B A 3 ? B 4 ? 19 1 1 A DG 4 1_555 B DC 3 1_555 0.128 0.285 0.043 -5.710 -5.904 -7.267 4 A_DG4:DC3_B A 4 ? B 3 ? 19 1 1 A DC 5 1_555 B DG 2 1_555 -0.047 -0.147 0.136 2.141 -7.892 0.945 5 A_DC5:DG2_B A 5 ? B 2 ? 19 1 1 A DG 6 1_555 B DC 1 1_555 0.332 -0.379 0.303 7.670 -2.370 3.651 6 A_DG6:DC1_B A 6 ? B 1 ? 19 1 1 C DC 1 1_555 D DG 6 1_555 -0.357 0.004 0.121 2.797 4.159 1.779 7 C_DC1:DG6_D C 1 ? D 6 ? 19 1 1 C DG 2 1_555 D DC 5 1_555 0.348 -0.084 0.196 0.944 -0.515 -0.853 8 C_DG2:DC5_D C 2 ? D 5 ? 19 1 1 C DC 3 1_555 D DG 4 1_555 -0.484 -0.049 -0.171 14.800 -5.226 2.629 9 C_DC3:DG4_D C 3 ? D 4 ? 19 1 1 C DG 4 1_555 D DC 3 1_555 0.640 0.121 -0.074 -3.535 -12.117 -2.115 10 C_DG4:DC3_D C 4 ? D 3 ? 19 1 1 C DC 5 1_555 D DG 2 1_555 -0.401 -0.154 0.357 -12.170 -11.893 0.528 11 C_DC5:DG2_D C 5 ? D 2 ? 19 1 1 C DG 6 1_555 D DC 1 1_555 -0.420 -0.159 0.643 11.755 -1.313 -0.868 12 C_DG6:DC1_D C 6 ? D 1 ? 19 1 1 E DC 1 1_555 F DG 6 1_555 0.029 -0.365 0.463 7.360 -7.421 5.033 13 E_DC1:DG6_F E 1 ? F 6 ? 19 1 1 E DG 2 1_555 F DC 5 1_555 0.737 -0.395 0.234 1.774 -5.600 -1.006 14 E_DG2:DC5_F E 2 ? F 5 ? 19 1 1 E DC 3 1_555 F DG 4 1_555 -0.258 -0.088 0.058 1.617 -14.723 3.342 15 E_DC3:DG4_F E 3 ? F 4 ? 19 1 1 E DG 4 1_555 F DC 3 1_555 0.604 -0.200 0.004 2.400 -15.015 -3.582 16 E_DG4:DC3_F E 4 ? F 3 ? 19 1 1 E DC 5 1_555 F DG 2 1_555 -0.886 0.079 0.127 -5.309 -16.528 -6.643 17 E_DC5:DG2_F E 5 ? F 2 ? 19 1 1 E DG 6 1_555 F DC 1 1_555 0.669 -0.322 0.703 13.193 -4.785 -4.742 18 E_DG6:DC1_F E 6 ? F 1 ? 19 1 1 G DC 1 1_555 H DG 6 1_555 -0.698 -0.200 0.319 -0.401 -2.884 -2.156 19 G_DC1:DG6_H G 1 ? H 6 ? 19 1 1 G DG 2 1_555 H DC 5 1_555 0.222 0.147 -0.107 -9.192 -0.097 -1.299 20 G_DG2:DC5_H G 2 ? H 5 ? 19 1 1 G DC 3 1_555 H DG 4 1_555 -0.013 -0.070 -0.043 15.800 -10.190 1.856 21 G_DC3:DG4_H G 3 ? H 4 ? 19 1 1 G DG 4 1_555 H DC 3 1_555 0.717 0.144 0.187 3.285 -11.990 -6.042 22 G_DG4:DC3_H G 4 ? H 3 ? 19 1 1 G DC 5 1_555 H DG 2 1_555 0.047 0.100 0.011 -4.202 -3.644 -1.453 23 G_DC5:DG2_H G 5 ? H 2 ? 19 1 1 G DG 6 1_555 H DC 1 1_555 -0.206 0.185 0.677 1.685 2.753 3.281 24 G_DG6:DC1_H G 6 ? H 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DC 1 1_555 B DG 6 1_555 A DG 2 1_555 B DC 5 1_555 0.181 5.445 3.745 3.294 1.871 -11.424 -28.404 5.142 2.663 -9.077 15.982 -12.033 1 AA_DC1DG2:DC5DG6_BB A 1 ? B 6 ? A 2 ? B 5 ? 1 A DG 2 1_555 B DC 5 1_555 A DC 3 1_555 B DG 4 1_555 -0.251 -1.283 3.433 0.564 -7.479 -49.038 2.095 -0.257 3.219 8.950 0.675 -49.573 2 AA_DG2DC3:DG4DC5_BB A 2 ? B 5 ? A 3 ? B 4 ? 1 A DC 3 1_555 B DG 4 1_555 A DG 4 1_555 B DC 3 1_555 -0.669 5.328 3.706 0.000 -0.976 -7.457 -36.613 -5.097 4.365 7.460 0.001 -7.521 3 AA_DC3DG4:DC3DG4_BB A 3 ? B 4 ? A 4 ? B 3 ? 1 A DG 4 1_555 B DC 3 1_555 A DC 5 1_555 B DG 2 1_555 0.255 -2.197 3.174 1.910 -8.656 -40.184 3.974 0.550 2.651 12.416 2.739 -41.111 4 AA_DG4DC5:DG2DC3_BB A 4 ? B 3 ? A 5 ? B 2 ? 1 A DC 5 1_555 B DG 2 1_555 A DG 6 1_555 B DC 1 1_555 -0.147 5.155 3.656 1.999 2.928 -12.399 -26.050 1.457 2.373 -13.206 9.017 -12.894 5 AA_DC5DG6:DC1DG2_BB A 5 ? B 2 ? A 6 ? B 1 ? 1 C DC 1 1_555 D DG 6 1_555 C DG 2 1_555 D DC 5 1_555 0.103 5.175 3.753 1.132 -1.793 -8.513 -28.125 4.278 4.684 11.838 7.472 -8.773 6 CC_DC1DG2:DC5DG6_DD C 1 ? D 6 ? C 2 ? D 5 ? 1 C DG 2 1_555 D DC 5 1_555 C DC 3 1_555 D DG 4 1_555 -0.012 -0.934 3.103 1.527 -7.102 -48.064 1.643 0.095 2.944 8.661 1.862 -48.578 7 CC_DG2DC3:DG4DC5_DD C 2 ? D 5 ? C 3 ? D 4 ? 1 C DC 3 1_555 D DG 4 1_555 C DG 4 1_555 D DC 3 1_555 -0.573 5.383 3.819 -0.136 -2.002 -2.272 -28.892 -15.791 6.392 41.363 -2.815 -3.031 8 CC_DC3DG4:DC3DG4_DD C 3 ? D 4 ? C 4 ? D 3 ? 1 C DG 4 1_555 D DC 3 1_555 C DC 5 1_555 D DG 2 1_555 -0.048 -2.127 3.680 -2.992 -11.737 -48.731 3.403 -0.284 3.114 13.975 -3.562 -50.125 9 CC_DG4DC5:DG2DC3_DD C 4 ? D 3 ? C 5 ? D 2 ? 1 C DC 5 1_555 D DG 2 1_555 C DG 6 1_555 D DC 1 1_555 -0.001 4.966 3.214 2.724 4.549 -15.280 -20.141 1.486 1.650 -16.473 9.865 -16.168 10 CC_DC5DG6:DC1DG2_DD C 5 ? D 2 ? C 6 ? D 1 ? 1 E DC 1 1_555 F DG 6 1_555 E DG 2 1_555 F DC 5 1_555 0.144 5.658 3.930 3.999 1.029 -10.180 -31.331 7.639 3.063 -5.510 21.417 -10.984 11 EE_DC1DG2:DC5DG6_FF E 1 ? F 6 ? E 2 ? F 5 ? 1 E DG 2 1_555 F DC 5 1_555 E DC 3 1_555 F DG 4 1_555 0.149 -1.489 3.432 1.536 -8.776 -46.468 2.579 0.313 3.111 11.004 1.926 -47.268 12 EE_DG2DC3:DG4DC5_FF E 2 ? F 5 ? E 3 ? F 4 ? 1 E DC 3 1_555 F DG 4 1_555 E DG 4 1_555 F DC 3 1_555 -0.426 5.190 3.513 1.343 -1.074 -2.874 -64.108 23.577 4.850 19.300 24.121 -3.349 13 EE_DC3DG4:DC3DG4_FF E 3 ? F 4 ? E 4 ? F 3 ? 1 E DG 4 1_555 F DC 3 1_555 E DC 5 1_555 F DG 2 1_555 -0.176 -1.880 3.603 -1.617 -6.567 -46.754 2.917 -0.360 3.318 8.224 -2.025 -47.213 14 EE_DG4DC5:DG2DC3_FF E 4 ? F 3 ? E 5 ? F 2 ? 1 E DC 5 1_555 F DG 2 1_555 E DG 6 1_555 F DC 1 1_555 0.370 4.878 3.253 3.043 -1.598 -12.498 -19.700 5.282 3.650 7.164 13.645 -12.961 15 EE_DC5DG6:DC1DG2_FF E 5 ? F 2 ? E 6 ? F 1 ? 1 G DC 1 1_555 H DG 6 1_555 G DG 2 1_555 H DC 5 1_555 0.204 5.204 3.809 6.107 -5.607 -5.072 -11.332 22.324 4.862 39.628 43.160 -9.716 16 GG_DC1DG2:DC5DG6_HH G 1 ? H 6 ? G 2 ? H 5 ? 1 G DG 2 1_555 H DC 5 1_555 G DC 3 1_555 H DG 4 1_555 -0.322 -0.778 2.975 -3.088 -5.330 -44.942 1.431 -0.662 2.843 6.934 -4.017 -45.340 17 GG_DG2DC3:DG4DC5_HH G 2 ? H 5 ? G 3 ? H 4 ? 1 G DC 3 1_555 H DG 4 1_555 G DG 4 1_555 H DC 3 1_555 -0.403 5.335 3.829 -0.136 -5.040 -6.518 -13.122 -3.450 6.284 37.742 -1.017 -8.239 18 GG_DC3DG4:DC3DG4_HH G 3 ? H 4 ? G 4 ? H 3 ? 1 G DG 4 1_555 H DC 3 1_555 G DC 5 1_555 H DG 2 1_555 0.141 -1.730 3.686 4.221 -7.857 -46.671 2.837 0.544 3.345 9.813 5.272 -47.469 19 GG_DG4DC5:DG2DC3_HH G 4 ? H 3 ? G 5 ? H 2 ? 1 G DC 5 1_555 H DG 2 1_555 G DG 6 1_555 H DC 1 1_555 0.283 5.024 3.422 -3.328 -0.786 -16.635 -16.460 -1.391 3.639 2.680 -11.347 -16.980 20 GG_DC5DG6:DC1DG2_HH G 5 ? H 2 ? G 6 ? H 1 ? # _pdbx_audit_support.funding_organization 'Swiss National Science Foundation' _pdbx_audit_support.country Switzerland _pdbx_audit_support.grant_number . _pdbx_audit_support.ordinal 1 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 4XQY _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 4XQZ _atom_sites.fract_transf_matrix[1][1] 0.030921 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.004498 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.028366 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.021210 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CA CL CU N O P S # loop_