HEADER SIGNALING PROTEIN/TRANSFERASE 22-JAN-15 4XSH TITLE THE COMPLEX STRUCTURE OF C3CER EXOENZYME AND GTP BOUND RHOA (NADH- TITLE 2 BOUND STATE) COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSFORMING PROTEIN RHOA; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 1-179; COMPND 5 SYNONYM: RHO CDNA CLONE 12,H12; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: ADP-RIBOSYLTRANSFERASE; COMPND 10 CHAIN: B; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: RHOA, ARH12, ARHA, RHO12; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PGEX4T-1; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: BACILLUS CEREUS; SOURCE 13 ORGANISM_TAXID: 1396; SOURCE 14 GENE: C3CER; SOURCE 15 EXPRESSION_SYSTEM: ESCHERICHIA COLI DH10B; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 316385; SOURCE 17 EXPRESSION_SYSTEM_STRAIN: DH10B; SOURCE 18 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 19 EXPRESSION_SYSTEM_PLASMID: PRHAM KEYWDS ADP RIBOSE TRANSFERASES, BACTERIAL TOXINS, SIGNALING PROTEIN- KEYWDS 2 TRANSFERASE COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR A.TODA,T.TSURUMURA,T.YOSHIDA,H.TSUGE REVDAT 3 08-NOV-23 4XSH 1 JRNL REMARK LINK REVDAT 2 19-AUG-15 4XSH 1 JRNL REVDAT 1 24-JUN-15 4XSH 0 JRNL AUTH A.TODA,T.TSURUMURA,T.YOSHIDA,Y.TSUMORI,H.TSUGE JRNL TITL RHO GTPASE RECOGNITION BY C3 EXOENZYME BASED ON C3-RHOA JRNL TITL 2 COMPLEX STRUCTURE. JRNL REF J.BIOL.CHEM. V. 290 19423 2015 JRNL REFN ESSN 1083-351X JRNL PMID 26067270 JRNL DOI 10.1074/JBC.M115.653220 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0103 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.56 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 12085 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.196 REMARK 3 R VALUE (WORKING SET) : 0.190 REMARK 3 FREE R VALUE : 0.254 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1334 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.57 REMARK 3 REFLECTION IN BIN (WORKING SET) : 902 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.90 REMARK 3 BIN R VALUE (WORKING SET) : 0.3270 REMARK 3 BIN FREE R VALUE SET COUNT : 95 REMARK 3 BIN FREE R VALUE : 0.3880 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3074 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 89 REMARK 3 SOLVENT ATOMS : 55 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 68.20 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.18000 REMARK 3 B22 (A**2) : 0.18000 REMARK 3 B33 (A**2) : -0.58000 REMARK 3 B12 (A**2) : 0.09000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.339 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.294 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 27.386 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.963 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.930 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3223 ; 0.011 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 3078 ; 0.003 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4348 ; 1.259 ; 1.999 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7128 ; 1.098 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 380 ; 5.267 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 148 ;36.035 ;24.932 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 601 ;20.005 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 18 ;23.329 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 466 ; 0.051 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3532 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 694 ; 0.003 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1526 ; 2.985 ; 4.649 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1525 ; 2.983 ; 4.648 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1904 ; 4.546 ; 6.973 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1905 ; 4.545 ; 6.974 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1697 ; 3.639 ; 5.218 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1697 ; 3.639 ; 5.218 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2445 ; 5.740 ; 7.653 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 13440 ; 8.909 ;44.899 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 13441 ; 8.909 ;44.902 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 3 A 114 REMARK 3 ORIGIN FOR THE GROUP (A): -6.4074 25.1518 28.2164 REMARK 3 T TENSOR REMARK 3 T11: 0.1297 T22: 0.1253 REMARK 3 T33: 0.0757 T12: -0.0791 REMARK 3 T13: -0.0129 T23: 0.0053 REMARK 3 L TENSOR REMARK 3 L11: 1.7592 L22: 0.9755 REMARK 3 L33: 3.4702 L12: -0.2287 REMARK 3 L13: 0.6084 L23: -0.0485 REMARK 3 S TENSOR REMARK 3 S11: 0.0844 S12: -0.1836 S13: -0.0214 REMARK 3 S21: 0.1224 S22: -0.1950 S23: -0.0366 REMARK 3 S31: -0.2251 S32: -0.0295 S33: 0.1106 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 115 A 179 REMARK 3 ORIGIN FOR THE GROUP (A): 2.8703 18.3295 37.6187 REMARK 3 T TENSOR REMARK 3 T11: 0.1465 T22: 0.2888 REMARK 3 T33: 0.1243 T12: -0.0489 REMARK 3 T13: -0.0584 T23: 0.1310 REMARK 3 L TENSOR REMARK 3 L11: 2.7804 L22: 2.3884 REMARK 3 L33: 3.3498 L12: -1.1291 REMARK 3 L13: -0.1945 L23: -0.3471 REMARK 3 S TENSOR REMARK 3 S11: -0.0429 S12: -0.6435 S13: -0.2420 REMARK 3 S21: 0.3017 S22: -0.1299 S23: -0.1219 REMARK 3 S31: 0.1807 S32: 0.5314 S33: 0.1728 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 15 B 61 REMARK 3 ORIGIN FOR THE GROUP (A): -24.0970 27.7696 12.7864 REMARK 3 T TENSOR REMARK 3 T11: 0.0083 T22: 0.3089 REMARK 3 T33: 0.1198 T12: 0.0071 REMARK 3 T13: -0.0177 T23: 0.0273 REMARK 3 L TENSOR REMARK 3 L11: 2.1054 L22: 3.2276 REMARK 3 L33: 4.0645 L12: 1.1488 REMARK 3 L13: -0.9413 L23: -0.4298 REMARK 3 S TENSOR REMARK 3 S11: 0.0102 S12: -0.2499 S13: 0.3193 REMARK 3 S21: 0.0702 S22: 0.0542 S23: 0.0435 REMARK 3 S31: -0.1199 S32: -0.5832 S33: -0.0644 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 62 B 146 REMARK 3 ORIGIN FOR THE GROUP (A): -17.5914 16.1720 7.1723 REMARK 3 T TENSOR REMARK 3 T11: 0.1107 T22: 0.1341 REMARK 3 T33: 0.1053 T12: -0.0914 REMARK 3 T13: -0.0108 T23: -0.0001 REMARK 3 L TENSOR REMARK 3 L11: 2.3277 L22: 0.9970 REMARK 3 L33: 3.1227 L12: -0.1564 REMARK 3 L13: -0.4111 L23: -0.2112 REMARK 3 S TENSOR REMARK 3 S11: -0.1055 S12: 0.0703 S13: -0.1214 REMARK 3 S21: -0.1308 S22: 0.1328 S23: 0.0470 REMARK 3 S31: 0.4251 S32: -0.3282 S33: -0.0273 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 147 B 155 REMARK 3 ORIGIN FOR THE GROUP (A): -8.4179 25.9815 11.4855 REMARK 3 T TENSOR REMARK 3 T11: 0.4533 T22: 0.1810 REMARK 3 T33: 0.2780 T12: 0.1336 REMARK 3 T13: 0.1220 T23: 0.1063 REMARK 3 L TENSOR REMARK 3 L11: 0.0566 L22: 1.0760 REMARK 3 L33: 8.7071 L12: 0.1344 REMARK 3 L13: 0.4368 L23: 3.0462 REMARK 3 S TENSOR REMARK 3 S11: -0.1140 S12: 0.0085 S13: -0.0677 REMARK 3 S21: 0.1203 S22: 0.3617 S23: -0.0475 REMARK 3 S31: 0.1693 S32: 0.9658 S33: -0.2477 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 156 B 196 REMARK 3 ORIGIN FOR THE GROUP (A): -20.9375 25.0888 8.1867 REMARK 3 T TENSOR REMARK 3 T11: 0.0484 T22: 0.2165 REMARK 3 T33: 0.1001 T12: -0.0366 REMARK 3 T13: -0.0125 T23: 0.0306 REMARK 3 L TENSOR REMARK 3 L11: 2.7666 L22: 1.1050 REMARK 3 L33: 3.4438 L12: -0.0904 REMARK 3 L13: 0.2026 L23: 0.3835 REMARK 3 S TENSOR REMARK 3 S11: -0.0752 S12: 0.0318 S13: 0.2425 REMARK 3 S21: -0.0764 S22: 0.0925 S23: 0.1044 REMARK 3 S31: 0.0263 S32: -0.4982 S33: -0.0174 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 197 B 219 REMARK 3 ORIGIN FOR THE GROUP (A): -5.3231 21.6773 0.8309 REMARK 3 T TENSOR REMARK 3 T11: 0.1531 T22: 0.1808 REMARK 3 T33: 0.0690 T12: -0.0656 REMARK 3 T13: 0.0736 T23: -0.0351 REMARK 3 L TENSOR REMARK 3 L11: 4.5415 L22: 2.3066 REMARK 3 L33: 2.9745 L12: -0.3091 REMARK 3 L13: 2.8672 L23: -0.4861 REMARK 3 S TENSOR REMARK 3 S11: -0.2242 S12: 0.3309 S13: 0.0304 REMARK 3 S21: 0.0165 S22: 0.1595 S23: -0.1023 REMARK 3 S31: 0.1141 S32: 0.1939 S33: 0.0647 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4XSH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 05-FEB-15. REMARK 100 THE DEPOSITION ID IS D_1000206235. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-SEP-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS VII REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13464 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 5.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 21.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX 1.9 REMARK 200 STARTING MODEL: 1A2B AND 3BW8 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.08 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.28 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM MES (PH 6.4), 20% PEG1500, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 91.11133 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 45.55567 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5180 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17530 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -17.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 GLY B 1 REMARK 465 ASN B 2 REMARK 465 ILE B 3 REMARK 465 PRO B 4 REMARK 465 THR B 5 REMARK 465 LYS B 6 REMARK 465 PRO B 7 REMARK 465 LYS B 8 REMARK 465 ASP B 9 REMARK 465 CYS B 10 REMARK 465 ASN B 11 REMARK 465 ASN B 12 REMARK 465 VAL B 13 REMARK 465 ASP B 14 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CE1 HIS A 126 OE2 GLU A 130 2.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 26 -67.96 -100.70 REMARK 500 TYR A 34 54.24 -114.84 REMARK 500 ASN A 123 58.46 -109.50 REMARK 500 ASN B 34 -7.84 -144.22 REMARK 500 TYR B 54 -72.36 -65.99 REMARK 500 ASN B 173 20.61 -155.23 REMARK 500 ASN B 206 -71.50 -104.54 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 202 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 19 OG1 REMARK 620 2 THR A 37 O 85.5 REMARK 620 3 GSP A 201 O2G 178.7 93.3 REMARK 620 4 GSP A 201 O1B 84.3 159.4 97.1 REMARK 620 5 HOH A 307 O 86.0 88.4 93.4 108.7 REMARK 620 6 HOH A 310 O 88.4 81.5 91.9 80.3 168.9 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GSP A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NAI B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 304 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4GY2 RELATED DB: PDB REMARK 900 RELATED ID: 4H03 RELATED DB: PDB REMARK 900 RELATED ID: 4XSG RELATED DB: PDB REMARK 900 RELATED ID: 5BWM RELATED DB: PDB DBREF 4XSH A 1 179 UNP P61586 RHOA_HUMAN 1 179 DBREF 4XSH B 1 219 UNP Q8KNY0 Q8KNY0_BACCE 1 219 SEQADV 4XSH ASN A 25 UNP P61586 PHE 25 ENGINEERED MUTATION SEQRES 1 A 179 MET ALA ALA ILE ARG LYS LYS LEU VAL ILE VAL GLY ASP SEQRES 2 A 179 GLY ALA CYS GLY LYS THR CYS LEU LEU ILE VAL ASN SER SEQRES 3 A 179 LYS ASP GLN PHE PRO GLU VAL TYR VAL PRO THR VAL PHE SEQRES 4 A 179 GLU ASN TYR VAL ALA ASP ILE GLU VAL ASP GLY LYS GLN SEQRES 5 A 179 VAL GLU LEU ALA LEU TRP ASP THR ALA GLY GLN GLU ASP SEQRES 6 A 179 TYR ASP ARG LEU ARG PRO LEU SER TYR PRO ASP THR ASP SEQRES 7 A 179 VAL ILE LEU MET CYS PHE SER ILE ASP SER PRO ASP SER SEQRES 8 A 179 LEU GLU ASN ILE PRO GLU LYS TRP THR PRO GLU VAL LYS SEQRES 9 A 179 HIS PHE CYS PRO ASN VAL PRO ILE ILE LEU VAL GLY ASN SEQRES 10 A 179 LYS LYS ASP LEU ARG ASN ASP GLU HIS THR ARG ARG GLU SEQRES 11 A 179 LEU ALA LYS MET LYS GLN GLU PRO VAL LYS PRO GLU GLU SEQRES 12 A 179 GLY ARG ASP MET ALA ASN ARG ILE GLY ALA PHE GLY TYR SEQRES 13 A 179 MET GLU CYS SER ALA LYS THR LYS ASP GLY VAL ARG GLU SEQRES 14 A 179 VAL PHE GLU MET ALA THR ARG ALA ALA LEU SEQRES 1 B 219 GLY ASN ILE PRO THR LYS PRO LYS ASP CYS ASN ASN VAL SEQRES 2 B 219 ASP LYS TYR LYS LEU CYS THR ASN LYS GLU GLU ALA ASP SEQRES 3 B 219 ALA TRP GLY LYS LYS GLN PHE ASN LYS TRP SER LYS GLU SEQRES 4 B 219 GLU LYS SER ALA ILE ARG ASP TYR THR LYS ASN ALA ARG SEQRES 5 B 219 PRO TYR ASN GLU PHE LEU ARG MET HIS ALA GLY LYS LEU SEQRES 6 B 219 ASP SER ASP PRO THR MET LYS LYS LYS ILE GLU SER LEU SEQRES 7 B 219 ASP LYS ALA LEU ASN ARG LYS GLU ALA LYS VAL ASN ASP SEQRES 8 B 219 ASN ILE LYS VAL TYR ARG GLY ASP ASP ALA TRP ILE PHE SEQRES 9 B 219 GLY LYS GLU TYR ASP ASN SER ILE ILE LYS ASN GLY LYS SEQRES 10 B 219 VAL ASP ARG GLU LYS PHE LYS GLU ILE GLN LYS LYS PHE SEQRES 11 B 219 GLN GLY LYS THR THR THR GLU PHE GLY TYR ILE SER THR SEQRES 12 B 219 SER ILE LEU ILE ASP ALA GLY TYR ALA LYS THR ARG PRO SEQRES 13 B 219 VAL MET THR GLU PHE LYS VAL GLY SER GLY THR HIS GLY SEQRES 14 B 219 ALA TYR MET ASN SER ASP ASP LEU THR ALA TYR PRO GLY SEQRES 15 B 219 GLN TYR GLU LEU LEU LEU PRO ARG ASN THR VAL TYR LYS SEQRES 16 B 219 ILE GLU LYS ILE TYR ILE ALA ILE ASP ASN ASN THR GLN SEQRES 17 B 219 LYS GLU GLN ILE LYS VAL GLU ALA THR ILE LYS HET GSP A 201 32 HET MG A 202 1 HET NAI B 301 44 HET EDO B 302 4 HET EDO B 303 4 HET EDO B 304 4 HETNAM GSP 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE HETNAM MG MAGNESIUM ION HETNAM NAI 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE HETNAM EDO 1,2-ETHANEDIOL HETSYN NAI NADH HETSYN EDO ETHYLENE GLYCOL FORMUL 3 GSP C10 H16 N5 O13 P3 S FORMUL 4 MG MG 2+ FORMUL 5 NAI C21 H29 N7 O14 P2 FORMUL 6 EDO 3(C2 H6 O2) FORMUL 9 HOH *55(H2 O) HELIX 1 AA1 GLY A 17 ASP A 28 1 12 HELIX 2 AA2 GLN A 63 ASP A 67 5 5 HELIX 3 AA3 LEU A 69 TYR A 74 5 6 HELIX 4 AA4 SER A 88 LYS A 98 1 11 HELIX 5 AA5 LYS A 98 CYS A 107 1 10 HELIX 6 AA6 LYS A 118 ARG A 122 5 5 HELIX 7 AA7 ASP A 124 LYS A 133 1 10 HELIX 8 AA8 LYS A 140 ILE A 151 1 12 HELIX 9 AA9 GLY A 166 LEU A 179 1 14 HELIX 10 AB1 ASN B 21 LYS B 31 1 11 HELIX 11 AB2 SER B 37 ASN B 50 1 14 HELIX 12 AB3 ALA B 51 HIS B 61 1 11 HELIX 13 AB4 ASP B 68 ARG B 84 1 17 HELIX 14 AB5 ASP B 100 GLY B 105 5 6 HELIX 15 AB6 ASP B 109 SER B 111 5 3 HELIX 16 AB7 ASP B 119 GLN B 131 1 13 SHEET 1 AA1 6 TYR A 42 VAL A 48 0 SHEET 2 AA1 6 LYS A 51 TRP A 58 -1 O VAL A 53 N ILE A 46 SHEET 3 AA1 6 ILE A 4 GLY A 12 1 N ILE A 10 O TRP A 58 SHEET 4 AA1 6 VAL A 79 SER A 85 1 O CYS A 83 N VAL A 11 SHEET 5 AA1 6 ILE A 112 ASN A 117 1 O VAL A 115 N MET A 82 SHEET 6 AA1 6 GLY A 155 GLU A 158 1 O MET A 157 N GLY A 116 SHEET 1 AA2 5 ILE B 93 ASP B 99 0 SHEET 2 AA2 5 VAL B 157 VAL B 163 -1 O THR B 159 N ARG B 97 SHEET 3 AA2 5 GLU B 210 ILE B 218 1 O VAL B 214 N GLU B 160 SHEET 4 AA2 5 VAL B 193 ILE B 203 -1 N TYR B 200 O LYS B 213 SHEET 5 AA2 5 THR B 134 THR B 136 -1 N THR B 135 O TYR B 194 SHEET 1 AA3 2 ILE B 113 LYS B 114 0 SHEET 2 AA3 2 LYS B 117 VAL B 118 -1 O LYS B 117 N LYS B 114 SHEET 1 AA4 3 ILE B 141 SER B 144 0 SHEET 2 AA4 3 GLU B 185 LEU B 188 -1 O LEU B 188 N ILE B 141 SHEET 3 AA4 3 ALA B 170 MET B 172 -1 N MET B 172 O GLU B 185 LINK OG1 THR A 19 MG MG A 202 1555 1555 2.12 LINK O THR A 37 MG MG A 202 1555 1555 2.11 LINK O2G GSP A 201 MG MG A 202 1555 1555 1.93 LINK O1B GSP A 201 MG MG A 202 1555 1555 2.04 LINK MG MG A 202 O HOH A 307 1555 1555 1.85 LINK MG MG A 202 O HOH A 310 1555 1555 2.37 SITE 1 AC1 20 GLY A 14 ALA A 15 GLY A 17 LYS A 18 SITE 2 AC1 20 THR A 19 CYS A 20 PHE A 30 THR A 37 SITE 3 AC1 20 GLY A 62 GLN A 63 LYS A 118 ASP A 120 SITE 4 AC1 20 LEU A 121 SER A 160 ALA A 161 LYS A 162 SITE 5 AC1 20 MG A 202 HOH A 307 HOH A 310 HOH A 318 SITE 1 AC2 5 THR A 19 THR A 37 GSP A 201 HOH A 307 SITE 2 AC2 5 HOH A 310 SITE 1 AC3 21 ASN A 41 THR B 48 ALA B 51 ARG B 52 SITE 2 AC3 21 ASN B 55 ARG B 59 ARG B 97 GLY B 98 SITE 3 AC3 21 ASP B 99 ASP B 100 TRP B 102 ILE B 103 SITE 4 AC3 21 GLU B 137 SER B 142 THR B 143 TYR B 151 SITE 5 AC3 21 ARG B 155 GLN B 183 GLU B 185 EDO B 302 SITE 6 AC3 21 HOH B 409 SITE 1 AC4 5 ARG B 59 ARG B 97 GLU B 137 TYR B 194 SITE 2 AC4 5 NAI B 301 SITE 1 AC5 4 LYS B 17 LEU B 18 CYS B 19 GLU B 24 SITE 1 AC6 7 PHE B 33 ASN B 34 TRP B 36 TYR B 171 SITE 2 AC6 7 LEU B 177 HOH B 401 HOH B 406 CRYST1 50.424 50.424 136.667 90.00 90.00 120.00 P 32 3 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019832 0.011450 0.000000 0.00000 SCALE2 0.000000 0.022900 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007317 0.00000