HEADER TRANSCRIPTION 22-JAN-15 4XT2 TITLE CRYSTAL STRUCTURE OF THE HIGH AFFINITY HETERODIMER OF HIF2 ALPHA AND TITLE 2 ARNT C-TERMINAL PAS DOMAINS IN COMPLEX WITH A TETRAZOLE-CONTAINING TITLE 3 ANTAGONIST COMPND MOL_ID: 1; COMPND 2 MOLECULE: ARYL HYDROCARBON RECEPTOR NUCLEAR TRANSLOCATOR; COMPND 3 CHAIN: B, D; COMPND 4 FRAGMENT: C-TERMINAL PAS DOMAIN (UNP RESIDUES 342-456); COMPND 5 SYNONYM: ARNT PROTEIN, CLASS E BASIC HELIX-LOOP-HELIX PROTEIN 2, COMPND 6 BHLHE2,DIOXIN RECEPTOR, NUCLEAR TRANSLOCATOR, HYPOXIA-INDUCIBLE COMPND 7 FACTOR 1-BETA, HIF1-BETA; COMPND 8 ENGINEERED: YES; COMPND 9 MUTATION: YES; COMPND 10 MOL_ID: 2; COMPND 11 MOLECULE: ENDOTHELIAL PAS DOMAIN-CONTAINING PROTEIN 1; COMPND 12 CHAIN: A, C; COMPND 13 FRAGMENT: C-TERMINAL PAS DOMAIN (UNP RESIDUES 239-350); COMPND 14 SYNONYM: EPAS-1, BASIC-HELIX-LOOP-HELIX-PAS PROTEIN MOP2, CLASS E COMPND 15 BASIC HELIX-LOOP-HELIX PROTEIN 73, BHLHE73, HIF-1-ALPHA-LIKE FACTOR, COMPND 16 HLF, HYPOXIA-INDUCIBLE FACTOR 2-ALPHA, HIF2-ALPHA, MEMBER OF PAS COMPND 17 PROTEIN 2, PAS DOMAIN-CONTAINING PROTEIN 2; COMPND 18 ENGINEERED: YES; COMPND 19 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ARNT, BHLHE2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PHIS-GB1 CON29; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 12 ORGANISM_COMMON: HUMAN; SOURCE 13 ORGANISM_TAXID: 9606; SOURCE 14 GENE: EPAS1, BHLHE73, HIF2A, MOP2, PASD2; SOURCE 15 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 16 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 17 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 18 EXPRESSION_SYSTEM_PLASMID: PHIS-GB1 CON30 KEYWDS TRANSCRIPTION FACTOR, HYPOXIA INDUCIBLE FACTOR, INHIBITOR, CANCER, KEYWDS 2 TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR T.H.SCHEUERMANN,K.H.GARDNER REVDAT 5 27-SEP-23 4XT2 1 REMARK REVDAT 4 04-DEC-19 4XT2 1 REMARK REVDAT 3 06-SEP-17 4XT2 1 REMARK REVDAT 2 23-DEC-15 4XT2 1 REMARK REVDAT 1 09-DEC-15 4XT2 0 JRNL AUTH T.H.SCHEUERMANN,D.STROUD,C.E.SLEET,L.BAYEH,C.SHOKRI,H.WANG, JRNL AUTH 2 C.G.CALDWELL,J.LONGGOOD,J.B.MACMILLAN,R.K.BRUICK, JRNL AUTH 3 K.H.GARDNER,U.K.TAMBAR JRNL TITL ISOFORM-SELECTIVE AND STEREOSELECTIVE INHIBITION OF HYPOXIA JRNL TITL 2 INDUCIBLE FACTOR-2. JRNL REF J.MED.CHEM. V. 58 5930 2015 JRNL REFN ISSN 0022-2623 JRNL PMID 26226049 JRNL DOI 10.1021/ACS.JMEDCHEM.5B00529 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.2_1309 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.69 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 54336 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.161 REMARK 3 R VALUE (WORKING SET) : 0.159 REMARK 3 FREE R VALUE : 0.192 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.040 REMARK 3 FREE R VALUE TEST SET COUNT : 2741 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 41.7004 - 4.6080 0.98 2602 139 0.1831 0.2088 REMARK 3 2 4.6080 - 3.6582 1.00 2624 127 0.1325 0.1528 REMARK 3 3 3.6582 - 3.1960 1.00 2587 148 0.1566 0.1856 REMARK 3 4 3.1960 - 2.9039 1.00 2590 130 0.1637 0.1741 REMARK 3 5 2.9039 - 2.6958 1.00 2577 148 0.1613 0.1995 REMARK 3 6 2.6958 - 2.5368 1.00 2590 138 0.1515 0.1680 REMARK 3 7 2.5368 - 2.4098 1.00 2598 120 0.1490 0.1798 REMARK 3 8 2.4098 - 2.3049 1.00 2580 149 0.1452 0.1934 REMARK 3 9 2.3049 - 2.2162 1.00 2591 130 0.1514 0.2251 REMARK 3 10 2.2162 - 2.1397 1.00 2581 123 0.1494 0.1915 REMARK 3 11 2.1397 - 2.0728 1.00 2563 145 0.1495 0.1837 REMARK 3 12 2.0728 - 2.0136 1.00 2588 127 0.1494 0.1571 REMARK 3 13 2.0136 - 1.9606 1.00 2575 143 0.1549 0.2057 REMARK 3 14 1.9606 - 1.9127 1.00 2578 143 0.1553 0.2014 REMARK 3 15 1.9127 - 1.8692 1.00 2585 134 0.1689 0.2374 REMARK 3 16 1.8692 - 1.8295 1.00 2541 144 0.1755 0.2058 REMARK 3 17 1.8295 - 1.7929 1.00 2592 150 0.1913 0.2017 REMARK 3 18 1.7929 - 1.7590 1.00 2531 135 0.1976 0.2995 REMARK 3 19 1.7590 - 1.7276 1.00 2597 129 0.2150 0.2768 REMARK 3 20 1.7276 - 1.6983 0.97 2525 139 0.2230 0.2257 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.760 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 3923 REMARK 3 ANGLE : 1.345 5322 REMARK 3 CHIRALITY : 0.083 564 REMARK 3 PLANARITY : 0.006 687 REMARK 3 DIHEDRAL : 15.142 1459 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 25 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 358 THROUGH 367 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.7679 -10.9143 15.7687 REMARK 3 T TENSOR REMARK 3 T11: 0.2055 T22: 0.1438 REMARK 3 T33: 0.1729 T12: -0.0164 REMARK 3 T13: -0.0092 T23: 0.0301 REMARK 3 L TENSOR REMARK 3 L11: 3.2266 L22: 8.0595 REMARK 3 L33: 6.2630 L12: 0.4313 REMARK 3 L13: -0.4389 L23: -3.8826 REMARK 3 S TENSOR REMARK 3 S11: 0.0720 S12: 0.1301 S13: 0.4802 REMARK 3 S21: 0.1317 S22: -0.2733 S23: 0.0737 REMARK 3 S31: -0.7425 S32: 0.1868 S33: 0.0215 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 368 THROUGH 390 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.0598 -19.2242 15.7742 REMARK 3 T TENSOR REMARK 3 T11: 0.0828 T22: 0.1569 REMARK 3 T33: 0.1674 T12: -0.0079 REMARK 3 T13: -0.0075 T23: -0.0226 REMARK 3 L TENSOR REMARK 3 L11: 2.8235 L22: 4.1719 REMARK 3 L33: 4.3602 L12: 0.0486 REMARK 3 L13: -1.1660 L23: -0.0821 REMARK 3 S TENSOR REMARK 3 S11: 0.0522 S12: 0.2525 S13: -0.0726 REMARK 3 S21: -0.1440 S22: -0.0444 S23: 0.4804 REMARK 3 S31: -0.0225 S32: -0.4562 S33: -0.0778 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 391 THROUGH 401 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.4375 -26.2835 14.7690 REMARK 3 T TENSOR REMARK 3 T11: 0.1486 T22: 0.0994 REMARK 3 T33: 0.1524 T12: -0.0295 REMARK 3 T13: 0.0121 T23: -0.0151 REMARK 3 L TENSOR REMARK 3 L11: 7.3394 L22: 1.5123 REMARK 3 L33: 4.3814 L12: 1.2325 REMARK 3 L13: -3.2348 L23: 0.0239 REMARK 3 S TENSOR REMARK 3 S11: -0.2354 S12: -0.1483 S13: -0.2130 REMARK 3 S21: 0.0432 S22: -0.0688 S23: 0.2820 REMARK 3 S31: 0.3643 S32: -0.1600 S33: 0.2903 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 402 THROUGH 417 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.3839 -24.5667 21.5121 REMARK 3 T TENSOR REMARK 3 T11: 0.1036 T22: 0.1904 REMARK 3 T33: 0.1201 T12: -0.0056 REMARK 3 T13: 0.0020 T23: 0.0509 REMARK 3 L TENSOR REMARK 3 L11: 1.9580 L22: 6.4357 REMARK 3 L33: 6.8599 L12: -0.5398 REMARK 3 L13: 0.6318 L23: 5.1696 REMARK 3 S TENSOR REMARK 3 S11: -0.1506 S12: -0.4555 S13: -0.2420 REMARK 3 S21: 0.3173 S22: 0.1266 S23: 0.0894 REMARK 3 S31: 0.3228 S32: 0.1662 S33: -0.0134 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 418 THROUGH 422 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.0195 -14.2699 31.2931 REMARK 3 T TENSOR REMARK 3 T11: 0.2118 T22: 0.4554 REMARK 3 T33: 0.0900 T12: -0.0090 REMARK 3 T13: -0.0100 T23: -0.0598 REMARK 3 L TENSOR REMARK 3 L11: 0.7042 L22: 4.3688 REMARK 3 L33: 7.5052 L12: -0.0596 REMARK 3 L13: -1.5986 L23: -3.4151 REMARK 3 S TENSOR REMARK 3 S11: 0.1452 S12: -0.7380 S13: 0.0303 REMARK 3 S21: 0.3689 S22: -0.4602 S23: -0.0877 REMARK 3 S31: -0.0896 S32: 0.8531 S33: -0.6400 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 423 THROUGH 435 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.3950 -20.8760 9.1770 REMARK 3 T TENSOR REMARK 3 T11: 0.1105 T22: 0.1318 REMARK 3 T33: 0.0866 T12: -0.0210 REMARK 3 T13: -0.0042 T23: 0.0147 REMARK 3 L TENSOR REMARK 3 L11: 2.7112 L22: 2.4841 REMARK 3 L33: 1.9791 L12: -0.5510 REMARK 3 L13: -2.0525 L23: -0.1632 REMARK 3 S TENSOR REMARK 3 S11: -0.1217 S12: 0.2150 S13: -0.2588 REMARK 3 S21: -0.1885 S22: 0.0968 S23: 0.0565 REMARK 3 S31: 0.0865 S32: -0.0899 S33: 0.0439 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 436 THROUGH 446 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.4795 -16.2634 17.1216 REMARK 3 T TENSOR REMARK 3 T11: 0.0829 T22: 0.1492 REMARK 3 T33: 0.0902 T12: -0.0001 REMARK 3 T13: -0.0005 T23: 0.0167 REMARK 3 L TENSOR REMARK 3 L11: 1.8624 L22: 1.0561 REMARK 3 L33: 3.4028 L12: -0.1142 REMARK 3 L13: -2.4946 L23: 0.4343 REMARK 3 S TENSOR REMARK 3 S11: 0.1110 S12: -0.1366 S13: 0.0794 REMARK 3 S21: 0.0517 S22: 0.1187 S23: 0.0619 REMARK 3 S31: -0.1544 S32: 0.1009 S33: -0.1190 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 447 THROUGH 455 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.9026 -17.5232 38.6037 REMARK 3 T TENSOR REMARK 3 T11: 0.3452 T22: 0.2801 REMARK 3 T33: 0.1675 T12: 0.0603 REMARK 3 T13: 0.0839 T23: 0.0214 REMARK 3 L TENSOR REMARK 3 L11: 0.4626 L22: 2.6511 REMARK 3 L33: 7.3531 L12: -0.2071 REMARK 3 L13: -1.0420 L23: 3.8464 REMARK 3 S TENSOR REMARK 3 S11: 0.0577 S12: 0.0598 S13: -0.0701 REMARK 3 S21: -0.1596 S22: -0.0910 S23: -0.0916 REMARK 3 S31: 0.5385 S32: 0.3012 S33: 0.0735 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 456 THROUGH 468 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.3626 -13.3155 14.7028 REMARK 3 T TENSOR REMARK 3 T11: 0.0753 T22: 0.1035 REMARK 3 T33: 0.0838 T12: -0.0202 REMARK 3 T13: -0.0140 T23: -0.0086 REMARK 3 L TENSOR REMARK 3 L11: 2.2451 L22: 2.7015 REMARK 3 L33: 6.9608 L12: -0.4284 REMARK 3 L13: -2.6366 L23: -1.2538 REMARK 3 S TENSOR REMARK 3 S11: 0.2484 S12: -0.0549 S13: 0.2356 REMARK 3 S21: -0.0033 S22: 0.0464 S23: 0.0449 REMARK 3 S31: -0.3408 S32: -0.0237 S33: -0.3140 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 360 THROUGH 372 ) REMARK 3 ORIGIN FOR THE GROUP (A): 49.0531 -17.3451 19.0095 REMARK 3 T TENSOR REMARK 3 T11: 0.0626 T22: 0.1182 REMARK 3 T33: 0.1020 T12: -0.0179 REMARK 3 T13: 0.0200 T23: -0.0061 REMARK 3 L TENSOR REMARK 3 L11: 3.8083 L22: 6.3923 REMARK 3 L33: 7.2298 L12: -0.5734 REMARK 3 L13: -0.4703 L23: 1.6326 REMARK 3 S TENSOR REMARK 3 S11: 0.1004 S12: -0.1250 S13: 0.1468 REMARK 3 S21: -0.0832 S22: -0.0286 S23: -0.2357 REMARK 3 S31: -0.1159 S32: -0.0554 S33: -0.0889 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 373 THROUGH 391 ) REMARK 3 ORIGIN FOR THE GROUP (A): 56.2461 -17.1488 24.6453 REMARK 3 T TENSOR REMARK 3 T11: 0.0943 T22: 0.1856 REMARK 3 T33: 0.1460 T12: -0.0054 REMARK 3 T13: -0.0206 T23: -0.0102 REMARK 3 L TENSOR REMARK 3 L11: 1.5990 L22: 2.4965 REMARK 3 L33: 4.0371 L12: 0.3668 REMARK 3 L13: 0.0152 L23: 1.3259 REMARK 3 S TENSOR REMARK 3 S11: -0.0266 S12: -0.1079 S13: 0.0372 REMARK 3 S21: 0.1732 S22: 0.0680 S23: -0.3298 REMARK 3 S31: -0.0060 S32: 0.6227 S33: -0.0483 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 392 THROUGH 401 ) REMARK 3 ORIGIN FOR THE GROUP (A): 48.2517 -26.3358 24.2182 REMARK 3 T TENSOR REMARK 3 T11: 0.2034 T22: 0.1357 REMARK 3 T33: 0.1264 T12: -0.0155 REMARK 3 T13: -0.0047 T23: 0.0192 REMARK 3 L TENSOR REMARK 3 L11: 8.7571 L22: 0.8188 REMARK 3 L33: 8.9475 L12: -0.9277 REMARK 3 L13: -8.1580 L23: 0.0432 REMARK 3 S TENSOR REMARK 3 S11: -0.5294 S12: 0.2119 S13: -0.0776 REMARK 3 S21: -0.0990 S22: 0.2245 S23: 0.0837 REMARK 3 S31: 1.0777 S32: -0.1363 S33: 0.3083 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 402 THROUGH 417 ) REMARK 3 ORIGIN FOR THE GROUP (A): 37.0261 -23.8683 19.8848 REMARK 3 T TENSOR REMARK 3 T11: 0.1045 T22: 0.1367 REMARK 3 T33: 0.1659 T12: -0.0369 REMARK 3 T13: 0.0023 T23: 0.0041 REMARK 3 L TENSOR REMARK 3 L11: 3.1103 L22: 5.8578 REMARK 3 L33: 3.6892 L12: -0.7338 REMARK 3 L13: 1.7561 L23: -4.2949 REMARK 3 S TENSOR REMARK 3 S11: 0.1187 S12: -0.0100 S13: -0.3300 REMARK 3 S21: -0.0131 S22: 0.1588 S23: 0.1725 REMARK 3 S31: 0.2413 S32: -0.0682 S33: -0.2866 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 418 THROUGH 446 ) REMARK 3 ORIGIN FOR THE GROUP (A): 42.9189 -17.5524 25.1198 REMARK 3 T TENSOR REMARK 3 T11: 0.1007 T22: 0.1406 REMARK 3 T33: 0.1059 T12: -0.0302 REMARK 3 T13: 0.0215 T23: -0.0049 REMARK 3 L TENSOR REMARK 3 L11: 0.6163 L22: 1.7599 REMARK 3 L33: 4.5025 L12: -0.3512 REMARK 3 L13: 0.2290 L23: -1.5746 REMARK 3 S TENSOR REMARK 3 S11: -0.0323 S12: -0.0531 S13: -0.0747 REMARK 3 S21: 0.1937 S22: 0.1414 S23: 0.0234 REMARK 3 S31: -0.1988 S32: -0.0604 S33: -0.0893 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 447 THROUGH 466 ) REMARK 3 ORIGIN FOR THE GROUP (A): 46.2143 -14.9332 13.8880 REMARK 3 T TENSOR REMARK 3 T11: 0.1043 T22: 0.1555 REMARK 3 T33: 0.0926 T12: -0.0238 REMARK 3 T13: 0.0207 T23: -0.0202 REMARK 3 L TENSOR REMARK 3 L11: 0.1739 L22: 0.4792 REMARK 3 L33: 8.3313 L12: -0.1818 REMARK 3 L13: -0.5152 L23: 0.6415 REMARK 3 S TENSOR REMARK 3 S11: 0.0551 S12: 0.0192 S13: 0.0629 REMARK 3 S21: 0.0972 S22: -0.0034 S23: 0.0128 REMARK 3 S31: 0.1693 S32: -0.3811 S33: 0.0027 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 234 THROUGH 272 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.0710 -5.2885 26.4749 REMARK 3 T TENSOR REMARK 3 T11: 0.1340 T22: 0.1615 REMARK 3 T33: 0.2452 T12: -0.0006 REMARK 3 T13: -0.0262 T23: -0.0132 REMARK 3 L TENSOR REMARK 3 L11: 2.2162 L22: 4.6405 REMARK 3 L33: 4.4266 L12: -0.5652 REMARK 3 L13: -0.4683 L23: 0.6904 REMARK 3 S TENSOR REMARK 3 S11: 0.1110 S12: 0.0647 S13: -0.0081 REMARK 3 S21: -0.1566 S22: -0.0409 S23: 0.5666 REMARK 3 S31: -0.0341 S32: -0.4691 S33: -0.0614 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 273 THROUGH 333 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.1080 1.6434 30.2313 REMARK 3 T TENSOR REMARK 3 T11: 0.1503 T22: 0.1786 REMARK 3 T33: 0.1560 T12: -0.0309 REMARK 3 T13: -0.0202 T23: -0.0290 REMARK 3 L TENSOR REMARK 3 L11: 1.8981 L22: 4.9279 REMARK 3 L33: 3.0407 L12: -2.3918 REMARK 3 L13: -1.8703 L23: 1.5279 REMARK 3 S TENSOR REMARK 3 S11: -0.0951 S12: -0.2609 S13: 0.1244 REMARK 3 S21: 0.0905 S22: 0.3730 S23: -0.2492 REMARK 3 S31: -0.2108 S32: 0.2951 S33: -0.1939 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 334 THROUGH 349 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.8322 -4.0132 31.1387 REMARK 3 T TENSOR REMARK 3 T11: 0.1849 T22: 0.1374 REMARK 3 T33: 0.2140 T12: 0.0341 REMARK 3 T13: 0.0407 T23: 0.0539 REMARK 3 L TENSOR REMARK 3 L11: 3.5964 L22: 4.6661 REMARK 3 L33: 2.6580 L12: -1.3950 REMARK 3 L13: 0.1322 L23: 1.4722 REMARK 3 S TENSOR REMARK 3 S11: -0.0045 S12: -0.1014 S13: 0.2072 REMARK 3 S21: 0.3166 S22: 0.3071 S23: 0.4419 REMARK 3 S31: -0.2681 S32: -0.2259 S33: -0.2610 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 236 THROUGH 248 ) REMARK 3 ORIGIN FOR THE GROUP (A): 57.2621 -10.2281 7.4607 REMARK 3 T TENSOR REMARK 3 T11: 0.1187 T22: 0.2191 REMARK 3 T33: 0.1780 T12: -0.0198 REMARK 3 T13: 0.0082 T23: -0.0367 REMARK 3 L TENSOR REMARK 3 L11: 3.3249 L22: 4.6811 REMARK 3 L33: 2.1079 L12: -1.2437 REMARK 3 L13: -0.2060 L23: 0.1302 REMARK 3 S TENSOR REMARK 3 S11: 0.1652 S12: 0.3806 S13: -0.0712 REMARK 3 S21: -0.3531 S22: -0.0053 S23: -0.3769 REMARK 3 S31: 0.0831 S32: 0.3702 S33: -0.0686 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 249 THROUGH 272 ) REMARK 3 ORIGIN FOR THE GROUP (A): 58.7904 -2.4060 15.0214 REMARK 3 T TENSOR REMARK 3 T11: 0.1342 T22: 0.1296 REMARK 3 T33: 0.1901 T12: -0.0535 REMARK 3 T13: -0.0325 T23: 0.0170 REMARK 3 L TENSOR REMARK 3 L11: 5.8096 L22: 3.9718 REMARK 3 L33: 3.7055 L12: 0.6708 REMARK 3 L13: -2.3851 L23: 1.1659 REMARK 3 S TENSOR REMARK 3 S11: 0.0490 S12: -0.0680 S13: -0.0183 REMARK 3 S21: 0.2577 S22: 0.0078 S23: -0.3823 REMARK 3 S31: -0.0014 S32: 0.2094 S33: -0.0640 REMARK 3 TLS GROUP : 21 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 273 THROUGH 282 ) REMARK 3 ORIGIN FOR THE GROUP (A): 56.3495 6.8500 12.1293 REMARK 3 T TENSOR REMARK 3 T11: 0.1392 T22: 0.0864 REMARK 3 T33: 0.1632 T12: -0.0303 REMARK 3 T13: 0.0166 T23: -0.0165 REMARK 3 L TENSOR REMARK 3 L11: 4.1549 L22: 5.1393 REMARK 3 L33: 7.9126 L12: 0.8744 REMARK 3 L13: 1.0519 L23: -3.9873 REMARK 3 S TENSOR REMARK 3 S11: -0.0856 S12: 0.1703 S13: 0.0542 REMARK 3 S21: 0.0526 S22: -0.0399 S23: -0.2959 REMARK 3 S31: -0.1544 S32: 0.0837 S33: 0.0924 REMARK 3 TLS GROUP : 22 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 283 THROUGH 315 ) REMARK 3 ORIGIN FOR THE GROUP (A): 49.5408 3.8503 5.4267 REMARK 3 T TENSOR REMARK 3 T11: 0.1737 T22: 0.1493 REMARK 3 T33: 0.1169 T12: 0.0136 REMARK 3 T13: -0.0178 T23: -0.0032 REMARK 3 L TENSOR REMARK 3 L11: 4.3609 L22: 3.5079 REMARK 3 L33: 2.4341 L12: 1.6375 REMARK 3 L13: -0.7421 L23: -0.4423 REMARK 3 S TENSOR REMARK 3 S11: -0.0237 S12: 0.0578 S13: 0.0955 REMARK 3 S21: -0.1896 S22: 0.1034 S23: 0.2108 REMARK 3 S31: -0.4075 S32: -0.1417 S33: -0.0875 REMARK 3 TLS GROUP : 23 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 316 THROUGH 327 ) REMARK 3 ORIGIN FOR THE GROUP (A): 49.5097 -2.3803 7.3852 REMARK 3 T TENSOR REMARK 3 T11: 0.0968 T22: 0.1444 REMARK 3 T33: 0.0987 T12: -0.0292 REMARK 3 T13: -0.0075 T23: -0.0169 REMARK 3 L TENSOR REMARK 3 L11: 8.2749 L22: 3.3545 REMARK 3 L33: 6.5703 L12: 2.2799 REMARK 3 L13: -6.0707 L23: -2.4688 REMARK 3 S TENSOR REMARK 3 S11: -0.0143 S12: -0.0162 S13: 0.0999 REMARK 3 S21: -0.1307 S22: 0.0499 S23: 0.0180 REMARK 3 S31: -0.0761 S32: 0.0878 S33: -0.0529 REMARK 3 TLS GROUP : 24 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 328 THROUGH 333 ) REMARK 3 ORIGIN FOR THE GROUP (A): 35.0292 -4.0235 25.9368 REMARK 3 T TENSOR REMARK 3 T11: 0.3620 T22: 0.8444 REMARK 3 T33: 0.4248 T12: -0.0014 REMARK 3 T13: 0.1472 T23: -0.1024 REMARK 3 L TENSOR REMARK 3 L11: 3.1670 L22: 3.7980 REMARK 3 L33: 6.5892 L12: 0.8628 REMARK 3 L13: -1.8867 L23: -2.4847 REMARK 3 S TENSOR REMARK 3 S11: -0.4482 S12: -1.0979 S13: -0.0380 REMARK 3 S21: 1.0822 S22: 0.3463 S23: 0.8227 REMARK 3 S31: 0.2528 S32: 0.7442 S33: -0.0464 REMARK 3 TLS GROUP : 25 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 334 THROUGH 349 ) REMARK 3 ORIGIN FOR THE GROUP (A): 53.8072 -3.8193 7.7217 REMARK 3 T TENSOR REMARK 3 T11: 0.1204 T22: 0.0995 REMARK 3 T33: 0.1731 T12: -0.0235 REMARK 3 T13: 0.0010 T23: -0.0354 REMARK 3 L TENSOR REMARK 3 L11: 3.7010 L22: 4.0178 REMARK 3 L33: 3.4617 L12: 0.8987 REMARK 3 L13: 0.3671 L23: -0.3966 REMARK 3 S TENSOR REMARK 3 S11: 0.0579 S12: -0.0493 S13: 0.2242 REMARK 3 S21: -0.1600 S22: 0.0811 S23: -0.3167 REMARK 3 S31: -0.0642 S32: 0.3081 S33: -0.0814 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4XT2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-JAN-15. REMARK 100 THE DEPOSITION ID IS D_1000206192. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-JUL-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97926 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 V704 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 V704 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 54343 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.698 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 3.100 REMARK 200 R MERGE (I) : 0.05900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.73 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 3.00 REMARK 200 R MERGE FOR SHELL (I) : 0.56200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3F1P REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.59 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.26 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2 UL 500 UM PROTEIN AGAINST 100 MM BIS REMARK 280 -TRIS, 25% PEG3350, PH 6.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 37.12650 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 42.19500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 37.12650 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 42.19500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1970 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11130 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -9.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1870 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11060 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -12.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY B 350 REMARK 465 GLU B 351 REMARK 465 PHE B 352 REMARK 465 LYS B 353 REMARK 465 GLY B 354 REMARK 465 LEU B 355 REMARK 465 ASN B 356 REMARK 465 VAL B 357 REMARK 465 GLN B 469 REMARK 465 GLU B 470 REMARK 465 GLY D 350 REMARK 465 GLU D 351 REMARK 465 PHE D 352 REMARK 465 LYS D 353 REMARK 465 GLY D 354 REMARK 465 LEU D 355 REMARK 465 ASN D 356 REMARK 465 VAL D 357 REMARK 465 CYS D 358 REMARK 465 GLN D 359 REMARK 465 SER D 467 REMARK 465 SER D 468 REMARK 465 GLN D 469 REMARK 465 GLU D 470 REMARK 465 ASN A 350 REMARK 465 GLY C 234 REMARK 465 GLU C 235 REMARK 465 ASN C 350 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 GLN B 359 CB CG CD OE1 NE2 REMARK 480 GLN B 389 CG CD OE1 REMARK 480 LYS B 394 CE NZ REMARK 480 LYS B 417 NZ REMARK 480 LYS B 419 CD CE NZ REMARK 480 LYS D 394 NZ REMARK 480 LYS D 419 CE NZ REMARK 480 ASP A 240 CG OD1 OD2 REMARK 480 LYS A 253 NZ REMARK 480 ARG A 260 CD NE CZ NH1 NH2 REMARK 480 GLU A 263 CG CD OE1 OE2 REMARK 480 ARG A 275 NH1 NH2 REMARK 480 LYS A 291 CG CD CE NZ REMARK 480 GLN A 294 CG CD OE1 NE2 REMARK 480 LYS A 299 CD CE NZ REMARK 480 GLN A 301 CD OE1 NE2 REMARK 480 GLN A 333 CG CD OE1 NE2 REMARK 480 PHE C 236 CB CG CD1 CD2 CE1 CE2 CZ REMARK 480 LYS C 237 CD CE NZ REMARK 480 GLU C 263 CD OE1 OE2 REMARK 480 GLN C 294 CG CD OE1 NE2 REMARK 480 LYS C 299 CD CE NZ REMARK 480 LEU C 310 CG CD1 CD2 REMARK 480 ARG C 330 NE CZ NH1 NH2 REMARK 480 GLN C 333 CB CG CD OE1 NE2 REMARK 480 GLN C 335 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG1 THR D 361 ND2 ASN D 463 2.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE2 GLU A 270 HE2 HIS C 268 1455 1.46 REMARK 500 O HOH B 543 O HOH C 551 3445 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP D 377 CB - CG - OD1 ANGL. DEV. = 6.8 DEGREES REMARK 500 ASP D 377 CB - CG - OD2 ANGL. DEV. = -5.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP B 452 40.34 -109.15 REMARK 500 GLN D 434 38.26 70.56 REMARK 500 ASN C 331 -4.83 113.99 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 43L A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 43L C 401 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3F1P RELATED DB: PDB REMARK 900 HIF2 ALPHA/ARNT C-TERMINAL PAS DOMAIN HETERODIMER WITH WATER IN THE REMARK 900 HIF-2 ALPHA PAS-B INTERNAL CAVITY REMARK 900 RELATED ID: 3F1O RELATED DB: PDB REMARK 900 HIF2 ALPHA/ARNT C-TERMINAL PAS DOMAIN HETERODIMER WITH THE HIF-2 REMARK 900 ALPHA PAS-B INTERNAL CAVITY OCCUPIED BY A MEDICINAL CHEMISTRY- REMARK 900 OPTIMIZED SMALL MOLECULE IDENTIFIED FROM AN NMR SCREEN OF A DRUG REMARK 900 FRAGMENT LIBRARY REMARK 900 RELATED ID: 3HW7 RELATED DB: PDB REMARK 900 HIF2 ALPHA/ARNT C-TERMINAL PAS DOMAIN HETERODIMER WITH THE HIF-2 REMARK 900 ALPHA PAS-B INTERNAL CAVITY OCCUPIED BY A MEDICINAL CHEMISTRY- REMARK 900 OPTIMIZED SMALL MOLECULE IDENTIFIED FROM AN NMR SCREEN OF A DRUG REMARK 900 FRAGMENT LIBRARY REMARK 900 RELATED ID: 3H82 RELATED DB: PDB REMARK 900 HIF2 ALPHA/ARNT C-TERMINAL PAS DOMAIN HETERODIMER WITH THE HIF-2 REMARK 900 ALPHA PAS-B INTERNAL CAVITY OCCUPIED BY A MEDICINAL CHEMISTRY- REMARK 900 OPTIMIZED SMALL MOLECULE IDENTIFIED FROM AN NMR SCREEN OF A DRUG REMARK 900 FRAGMENT LIBRARY REMARK 900 RELATED ID: 4GHI RELATED DB: PDB REMARK 900 HIF2 ALPHA/ARNT C-TERMINAL PAS DOMAIN HETERODIMER WITH THE HIF-2 REMARK 900 ALPHA PAS-B INTERNAL CAVITY OCCUPIED BY A MEDICINAL CHEMISTRY- REMARK 900 OPTIMIZED SMALL MOLECULE IDENTIFIED FROM AN HTS SCREEN OF PROTEIN REMARK 900 HETERODIMER DISRUPTION THAT ATTENUATES HIF TRANSCRIPTION IN CELLS REMARK 900 RELATED ID: 4GS9 RELATED DB: PDB REMARK 900 HIF2 ALPHA/ARNT C-TERMINAL PAS DOMAIN HETERODIMER WITH THE HIF-2 REMARK 900 ALPHA PAS-B INTERNAL CAVITY OCCUPIED BY AN INACTIVE ANALOG OF THE REMARK 900 SMALL MOLECULE IN PDB ENTRY 4GHI REMARK 900 RELATED ID: 4LPZ RELATED DB: PDB REMARK 900 ARNT PAS-B DOMAIN IN COMPLEX WITH A COILED-COIL COACTIVATER DBREF 4XT2 B 356 470 UNP P27540 ARNT_HUMAN 342 456 DBREF 4XT2 D 356 470 UNP P27540 ARNT_HUMAN 342 456 DBREF 4XT2 C 239 350 UNP Q99814 EPAS1_HUMAN 239 350 DBREF 4XT2 A 239 350 UNP Q99814 EPAS1_HUMAN 239 350 SEQADV 4XT2 GLY B 350 UNP P27540 EXPRESSION TAG SEQADV 4XT2 GLU B 351 UNP P27540 EXPRESSION TAG SEQADV 4XT2 PHE B 352 UNP P27540 EXPRESSION TAG SEQADV 4XT2 LYS B 353 UNP P27540 EXPRESSION TAG SEQADV 4XT2 GLY B 354 UNP P27540 EXPRESSION TAG SEQADV 4XT2 LEU B 355 UNP P27540 EXPRESSION TAG SEQADV 4XT2 ARG B 362 UNP P27540 GLU 348 ENGINEERED MUTATION SEQADV 4XT2 GLY D 350 UNP P27540 EXPRESSION TAG SEQADV 4XT2 GLU D 351 UNP P27540 EXPRESSION TAG SEQADV 4XT2 PHE D 352 UNP P27540 EXPRESSION TAG SEQADV 4XT2 LYS D 353 UNP P27540 EXPRESSION TAG SEQADV 4XT2 GLY D 354 UNP P27540 EXPRESSION TAG SEQADV 4XT2 LEU D 355 UNP P27540 EXPRESSION TAG SEQADV 4XT2 ARG D 362 UNP P27540 GLU 348 ENGINEERED MUTATION SEQADV 4XT2 GLY C 234 UNP Q99814 EXPRESSION TAG SEQADV 4XT2 GLU C 235 UNP Q99814 EXPRESSION TAG SEQADV 4XT2 PHE C 236 UNP Q99814 EXPRESSION TAG SEQADV 4XT2 LYS C 237 UNP Q99814 EXPRESSION TAG SEQADV 4XT2 GLY C 238 UNP Q99814 EXPRESSION TAG SEQADV 4XT2 GLU C 247 UNP Q99814 ARG 247 ENGINEERED MUTATION SEQADV 4XT2 GLY A 234 UNP Q99814 EXPRESSION TAG SEQADV 4XT2 GLU A 235 UNP Q99814 EXPRESSION TAG SEQADV 4XT2 PHE A 236 UNP Q99814 EXPRESSION TAG SEQADV 4XT2 LYS A 237 UNP Q99814 EXPRESSION TAG SEQADV 4XT2 GLY A 238 UNP Q99814 EXPRESSION TAG SEQADV 4XT2 GLU A 247 UNP Q99814 ARG 247 ENGINEERED MUTATION SEQRES 1 B 121 GLY GLU PHE LYS GLY LEU ASN VAL CYS GLN PRO THR ARG SEQRES 2 B 121 PHE ILE SER ARG HIS ASN ILE GLU GLY ILE PHE THR PHE SEQRES 3 B 121 VAL ASP HIS ARG CYS VAL ALA THR VAL GLY TYR GLN PRO SEQRES 4 B 121 GLN GLU LEU LEU GLY LYS ASN ILE VAL GLU PHE CYS HIS SEQRES 5 B 121 PRO GLU ASP GLN GLN LEU LEU ARG ASP SER PHE GLN GLN SEQRES 6 B 121 VAL VAL LYS LEU LYS GLY GLN VAL LEU SER VAL MET PHE SEQRES 7 B 121 ARG PHE ARG SER LYS ASN GLN GLU TRP LEU TRP MET ARG SEQRES 8 B 121 THR SER SER PHE THR PHE GLN ASN PRO TYR SER ASP GLU SEQRES 9 B 121 ILE GLU TYR ILE ILE CYS THR ASN THR ASN VAL LYS ASN SEQRES 10 B 121 SER SER GLN GLU SEQRES 1 D 121 GLY GLU PHE LYS GLY LEU ASN VAL CYS GLN PRO THR ARG SEQRES 2 D 121 PHE ILE SER ARG HIS ASN ILE GLU GLY ILE PHE THR PHE SEQRES 3 D 121 VAL ASP HIS ARG CYS VAL ALA THR VAL GLY TYR GLN PRO SEQRES 4 D 121 GLN GLU LEU LEU GLY LYS ASN ILE VAL GLU PHE CYS HIS SEQRES 5 D 121 PRO GLU ASP GLN GLN LEU LEU ARG ASP SER PHE GLN GLN SEQRES 6 D 121 VAL VAL LYS LEU LYS GLY GLN VAL LEU SER VAL MET PHE SEQRES 7 D 121 ARG PHE ARG SER LYS ASN GLN GLU TRP LEU TRP MET ARG SEQRES 8 D 121 THR SER SER PHE THR PHE GLN ASN PRO TYR SER ASP GLU SEQRES 9 D 121 ILE GLU TYR ILE ILE CYS THR ASN THR ASN VAL LYS ASN SEQRES 10 D 121 SER SER GLN GLU SEQRES 1 A 117 GLY GLU PHE LYS GLY LEU ASP SER LYS THR PHE LEU SER SEQRES 2 A 117 GLU HIS SER MET ASP MET LYS PHE THR TYR CYS ASP ASP SEQRES 3 A 117 ARG ILE THR GLU LEU ILE GLY TYR HIS PRO GLU GLU LEU SEQRES 4 A 117 LEU GLY ARG SER ALA TYR GLU PHE TYR HIS ALA LEU ASP SEQRES 5 A 117 SER GLU ASN MET THR LYS SER HIS GLN ASN LEU CYS THR SEQRES 6 A 117 LYS GLY GLN VAL VAL SER GLY GLN TYR ARG MET LEU ALA SEQRES 7 A 117 LYS HIS GLY GLY TYR VAL TRP LEU GLU THR GLN GLY THR SEQRES 8 A 117 VAL ILE TYR ASN PRO ARG ASN LEU GLN PRO GLN CYS ILE SEQRES 9 A 117 MET CYS VAL ASN TYR VAL LEU SER GLU ILE GLU LYS ASN SEQRES 1 C 117 GLY GLU PHE LYS GLY LEU ASP SER LYS THR PHE LEU SER SEQRES 2 C 117 GLU HIS SER MET ASP MET LYS PHE THR TYR CYS ASP ASP SEQRES 3 C 117 ARG ILE THR GLU LEU ILE GLY TYR HIS PRO GLU GLU LEU SEQRES 4 C 117 LEU GLY ARG SER ALA TYR GLU PHE TYR HIS ALA LEU ASP SEQRES 5 C 117 SER GLU ASN MET THR LYS SER HIS GLN ASN LEU CYS THR SEQRES 6 C 117 LYS GLY GLN VAL VAL SER GLY GLN TYR ARG MET LEU ALA SEQRES 7 C 117 LYS HIS GLY GLY TYR VAL TRP LEU GLU THR GLN GLY THR SEQRES 8 C 117 VAL ILE TYR ASN PRO ARG ASN LEU GLN PRO GLN CYS ILE SEQRES 9 C 117 MET CYS VAL ASN TYR VAL LEU SER GLU ILE GLU LYS ASN HET 43L A 401 36 HET 43L C 401 36 HETNAM 43L (5S,7R)-5,7-BIS(3-BROMOPHENYL)-4,5,6,7- HETNAM 2 43L TETRAHYDROTETRAZOLO[1,5-A]PYRIMIDINE FORMUL 5 43L 2(C16 H13 BR2 N5) FORMUL 7 HOH *310(H2 O) HELIX 1 AA1 ARG B 379 GLY B 385 1 7 HELIX 2 AA2 GLN B 387 LEU B 392 1 6 HELIX 3 AA3 ASN B 395 CYS B 400 5 6 HELIX 4 AA4 ASP B 404 LEU B 418 1 15 HELIX 5 AA5 ARG D 379 GLY D 385 1 7 HELIX 6 AA6 GLN D 387 LEU D 392 1 6 HELIX 7 AA7 ASN D 395 CYS D 400 5 6 HELIX 8 AA8 ASP D 404 LEU D 418 1 15 HELIX 9 AA9 GLY A 238 SER A 241 5 4 HELIX 10 AB1 ARG A 260 ILE A 265 1 6 HELIX 11 AB2 HIS A 268 LEU A 273 1 6 HELIX 12 AB3 SER A 276 PHE A 280 5 5 HELIX 13 AB4 ASP A 285 GLY A 300 1 16 HELIX 14 AB5 GLY C 238 SER C 241 5 4 HELIX 15 AB6 ARG C 260 GLY C 266 1 7 HELIX 16 AB7 HIS C 268 LEU C 272 5 5 HELIX 17 AB8 SER C 276 PHE C 280 5 5 HELIX 18 AB9 ASP C 285 GLY C 300 1 16 SHEET 1 AA1 5 PHE B 373 VAL B 376 0 SHEET 2 AA1 5 ARG B 362 HIS B 367 -1 N ARG B 366 O THR B 374 SHEET 3 AA1 5 TYR B 456 ASN B 463 -1 O CYS B 459 N SER B 365 SHEET 4 AA1 5 TRP B 436 PHE B 446 -1 N PHE B 444 O ILE B 458 SHEET 5 AA1 5 LEU B 423 ARG B 430 -1 N LEU B 423 O SER B 443 SHEET 1 AA2 5 PHE D 373 VAL D 376 0 SHEET 2 AA2 5 ARG D 362 HIS D 367 -1 N ARG D 366 O THR D 374 SHEET 3 AA2 5 TYR D 456 ASN D 463 -1 O CYS D 459 N SER D 365 SHEET 4 AA2 5 TRP D 436 PHE D 446 -1 N PHE D 444 O ILE D 458 SHEET 5 AA2 5 LEU D 423 ARG D 430 -1 N LEU D 423 O SER D 443 SHEET 1 AA3 5 PHE A 254 CYS A 257 0 SHEET 2 AA3 5 THR A 243 HIS A 248 -1 N GLU A 247 O THR A 255 SHEET 3 AA3 5 PRO A 334 VAL A 343 -1 O CYS A 339 N SER A 246 SHEET 4 AA3 5 TYR A 316 TYR A 327 -1 N ILE A 326 O GLN A 335 SHEET 5 AA3 5 GLN A 301 VAL A 303 -1 N VAL A 302 O GLY A 323 SHEET 1 AA4 5 PHE A 254 CYS A 257 0 SHEET 2 AA4 5 THR A 243 HIS A 248 -1 N GLU A 247 O THR A 255 SHEET 3 AA4 5 PRO A 334 VAL A 343 -1 O CYS A 339 N SER A 246 SHEET 4 AA4 5 TYR A 316 TYR A 327 -1 N ILE A 326 O GLN A 335 SHEET 5 AA4 5 TYR A 307 LEU A 310 -1 N TYR A 307 O LEU A 319 SHEET 1 AA5 5 PHE C 254 CYS C 257 0 SHEET 2 AA5 5 THR C 243 HIS C 248 -1 N GLU C 247 O THR C 255 SHEET 3 AA5 5 PRO C 334 VAL C 343 -1 O CYS C 339 N SER C 246 SHEET 4 AA5 5 TYR C 316 TYR C 327 -1 N ILE C 326 O GLN C 335 SHEET 5 AA5 5 GLN C 301 VAL C 303 -1 N VAL C 302 O GLY C 323 SHEET 1 AA6 5 PHE C 254 CYS C 257 0 SHEET 2 AA6 5 THR C 243 HIS C 248 -1 N GLU C 247 O THR C 255 SHEET 3 AA6 5 PRO C 334 VAL C 343 -1 O CYS C 339 N SER C 246 SHEET 4 AA6 5 TYR C 316 TYR C 327 -1 N ILE C 326 O GLN C 335 SHEET 5 AA6 5 TYR C 307 LEU C 310 -1 N TYR C 307 O LEU C 319 SITE 1 AC1 12 HIS A 248 MET A 252 PHE A 280 TYR A 281 SITE 2 AC1 12 MET A 289 SER A 292 HIS A 293 VAL A 302 SITE 3 AC1 12 TYR A 307 GLY A 323 ASN A 341 HOH A 505 SITE 1 AC2 13 HIS C 248 MET C 252 TYR C 281 MET C 289 SITE 2 AC2 13 SER C 292 HIS C 293 VAL C 302 TYR C 307 SITE 3 AC2 13 GLY C 323 CYS C 339 ASN C 341 HOH C 515 SITE 4 AC2 13 HOH C 519 CRYST1 74.253 84.390 82.784 90.00 104.39 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013467 0.000000 0.003455 0.00000 SCALE2 0.000000 0.011850 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012471 0.00000