HEADER MEMBRANE PROTEIN 23-JAN-15 4XTO TITLE CRYSTAL STRUCTURE OF THE LIGHT-DRIVEN SODIUM PUMP KR2 IN THE TITLE 2 PENTAMERIC RED FORM, PH 5.6 COMPND MOL_ID: 1; COMPND 2 MOLECULE: SODIUM PUMPING RHODOPSIN; COMPND 3 CHAIN: A, B, C, D, E; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DOKDONIA EIKASTA; SOURCE 3 ORGANISM_TAXID: 308116; SOURCE 4 GENE: NAR; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ION PUMP, MEMBRANE PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR I.GUSHCHIN,V.SHEVCHENKO,V.POLOVINKIN,V.GORDELIY REVDAT 6 10-JAN-24 4XTO 1 LINK REVDAT 5 13-MAY-15 4XTO 1 JRNL REVDAT 4 29-APR-15 4XTO 1 JRNL REVDAT 3 22-APR-15 4XTO 1 JRNL REVDAT 2 08-APR-15 4XTO 1 JRNL REVDAT 1 01-APR-15 4XTO 0 JRNL AUTH I.GUSHCHIN,V.SHEVCHENKO,V.POLOVINKIN,K.KOVALEV,A.ALEKSEEV, JRNL AUTH 2 E.ROUND,V.BORSHCHEVSKIY,T.BALANDIN,A.POPOV,T.GENSCH, JRNL AUTH 3 C.FAHLKE,C.BAMANN,D.WILLBOLD,G.BULDT,E.BAMBERG,V.GORDELIY JRNL TITL CRYSTAL STRUCTURE OF A LIGHT-DRIVEN SODIUM PUMP. JRNL REF NAT.STRUCT.MOL.BIOL. V. 22 390 2015 JRNL REFN ESSN 1545-9985 JRNL PMID 25849142 JRNL DOI 10.1038/NSMB.3002 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0049 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.30 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 47136 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.233 REMARK 3 R VALUE (WORKING SET) : 0.230 REMARK 3 FREE R VALUE : 0.280 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2482 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.87 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3484 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.22 REMARK 3 BIN R VALUE (WORKING SET) : 0.4040 REMARK 3 BIN FREE R VALUE SET COUNT : 188 REMARK 3 BIN FREE R VALUE : 0.4680 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 10544 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 113 REMARK 3 SOLVENT ATOMS : 15 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 81.28 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 9.25000 REMARK 3 B22 (A**2) : -8.69000 REMARK 3 B33 (A**2) : -0.56000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 1.017 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.381 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.445 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 25.683 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.931 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.899 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 10927 ; 0.002 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 10478 ; 0.004 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 14825 ; 0.603 ; 1.955 REMARK 3 BOND ANGLES OTHERS (DEGREES): 23628 ; 1.059 ; 3.003 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1315 ; 3.538 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 440 ;31.040 ;23.795 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1640 ;12.396 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 20 ;13.831 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1671 ; 0.034 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 12193 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 2716 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 5293 ; 6.449 ; 8.018 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 5292 ; 6.442 ; 8.018 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 6597 ; 9.558 ;12.023 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 6598 ; 9.559 ;12.024 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 5634 ; 6.440 ; 8.451 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 5635 ; 6.440 ; 8.451 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 8229 ; 9.887 ;12.490 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 13969 ;12.645 ;67.747 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 13970 ;12.645 ;67.749 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4XTO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 27-JAN-15. REMARK 100 THE DEPOSITION ID IS D_1000206284. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-JUL-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.969 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 47136 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 47.300 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 4.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.6 REMARK 200 DATA REDUNDANCY IN SHELL : 4.10 REMARK 200 R MERGE FOR SHELL (I) : 1.22300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.180 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 4XTN REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.80 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.06 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: THE CRYSTALS WERE GROWN USING IN MESO REMARK 280 CRYSTALLIZATION TECHNIQUE, LIPIDIC CUBIC PHASE, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 66.24000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 66.24000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 63.55000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 119.49000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 63.55000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 119.49000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 66.24000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 63.55000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 119.49000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 66.24000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 63.55000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 119.49000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: PENTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 18950 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 42180 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -125.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 GLN A 3 REMARK 465 VAL A 230 REMARK 465 LYS A 271 REMARK 465 ASN A 272 REMARK 465 LYS A 273 REMARK 465 GLU A 274 REMARK 465 LEU A 275 REMARK 465 VAL A 276 REMARK 465 GLU A 277 REMARK 465 ALA A 278 REMARK 465 ASN A 279 REMARK 465 SER A 280 REMARK 465 LEU A 281 REMARK 465 GLU A 282 REMARK 465 HIS A 283 REMARK 465 HIS A 284 REMARK 465 HIS A 285 REMARK 465 HIS A 286 REMARK 465 HIS A 287 REMARK 465 HIS A 288 REMARK 465 MET B 1 REMARK 465 THR B 2 REMARK 465 VAL B 230 REMARK 465 LYS B 271 REMARK 465 ASN B 272 REMARK 465 LYS B 273 REMARK 465 GLU B 274 REMARK 465 LEU B 275 REMARK 465 VAL B 276 REMARK 465 GLU B 277 REMARK 465 ALA B 278 REMARK 465 ASN B 279 REMARK 465 SER B 280 REMARK 465 LEU B 281 REMARK 465 GLU B 282 REMARK 465 HIS B 283 REMARK 465 HIS B 284 REMARK 465 HIS B 285 REMARK 465 HIS B 286 REMARK 465 HIS B 287 REMARK 465 HIS B 288 REMARK 465 MET C 1 REMARK 465 THR C 2 REMARK 465 GLN C 3 REMARK 465 VAL C 230 REMARK 465 ASP C 231 REMARK 465 GLY C 232 REMARK 465 LYS C 271 REMARK 465 ASN C 272 REMARK 465 LYS C 273 REMARK 465 GLU C 274 REMARK 465 LEU C 275 REMARK 465 VAL C 276 REMARK 465 GLU C 277 REMARK 465 ALA C 278 REMARK 465 ASN C 279 REMARK 465 SER C 280 REMARK 465 LEU C 281 REMARK 465 GLU C 282 REMARK 465 HIS C 283 REMARK 465 HIS C 284 REMARK 465 HIS C 285 REMARK 465 HIS C 286 REMARK 465 HIS C 287 REMARK 465 HIS C 288 REMARK 465 MET D 1 REMARK 465 THR D 2 REMARK 465 GLN D 3 REMARK 465 VAL D 53 REMARK 465 ASP D 54 REMARK 465 VAL D 230 REMARK 465 SER D 270 REMARK 465 LYS D 271 REMARK 465 ASN D 272 REMARK 465 LYS D 273 REMARK 465 GLU D 274 REMARK 465 LEU D 275 REMARK 465 VAL D 276 REMARK 465 GLU D 277 REMARK 465 ALA D 278 REMARK 465 ASN D 279 REMARK 465 SER D 280 REMARK 465 LEU D 281 REMARK 465 GLU D 282 REMARK 465 HIS D 283 REMARK 465 HIS D 284 REMARK 465 HIS D 285 REMARK 465 HIS D 286 REMARK 465 HIS D 287 REMARK 465 HIS D 288 REMARK 465 MET E 1 REMARK 465 THR E 2 REMARK 465 VAL E 230 REMARK 465 SER E 270 REMARK 465 LYS E 271 REMARK 465 ASN E 272 REMARK 465 LYS E 273 REMARK 465 GLU E 274 REMARK 465 LEU E 275 REMARK 465 VAL E 276 REMARK 465 GLU E 277 REMARK 465 ALA E 278 REMARK 465 ASN E 279 REMARK 465 SER E 280 REMARK 465 LEU E 281 REMARK 465 GLU E 282 REMARK 465 HIS E 283 REMARK 465 HIS E 284 REMARK 465 HIS E 285 REMARK 465 HIS E 286 REMARK 465 HIS E 287 REMARK 465 HIS E 288 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 4 CG CD OE1 OE2 REMARK 470 GLU A 18 OE1 OE2 REMARK 470 LYS A 51 CG CD CE NZ REMARK 470 LYS A 55 CE NZ REMARK 470 GLU A 90 OE1 OE2 REMARK 470 LYS A 186 CD CE NZ REMARK 470 LYS A 187 CE NZ REMARK 470 ASP A 231 CG OD1 OD2 REMARK 470 GLN B 3 CG CD OE1 NE2 REMARK 470 GLU B 4 CG CD OE1 OE2 REMARK 470 LYS B 51 CD CE NZ REMARK 470 LYS B 55 CG CD CE NZ REMARK 470 GLU B 90 CG CD OE1 OE2 REMARK 470 TRP B 183 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP B 183 CZ3 CH2 REMARK 470 LYS B 186 CD CE NZ REMARK 470 LYS B 187 CE NZ REMARK 470 GLU B 194 CG CD OE1 OE2 REMARK 470 GLN B 201 CG CD OE1 NE2 REMARK 470 LYS B 202 CD CE NZ REMARK 470 ASP B 231 CG OD1 OD2 REMARK 470 GLU C 4 OE1 OE2 REMARK 470 LYS C 51 CE NZ REMARK 470 LYS C 55 CE NZ REMARK 470 LYS C 186 CE NZ REMARK 470 LYS C 187 CG CD CE NZ REMARK 470 PHE C 233 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLU D 4 CD OE1 OE2 REMARK 470 LYS D 51 CE NZ REMARK 470 ASN D 52 CG OD1 ND2 REMARK 470 LYS D 55 CD CE NZ REMARK 470 LYS D 186 CE NZ REMARK 470 LYS D 187 CG CD CE NZ REMARK 470 ASP D 231 CG OD1 OD2 REMARK 470 GLN E 3 CG CD OE1 NE2 REMARK 470 LYS E 51 CG CD CE NZ REMARK 470 LYS E 55 CD CE NZ REMARK 470 TRP E 183 CZ2 CH2 REMARK 470 LYS E 186 CE NZ REMARK 470 LYS E 187 CD CE NZ REMARK 470 LYS E 193 CG CD CE NZ REMARK 470 GLU E 194 CG CD OE1 OE2 REMARK 470 GLN E 201 CG CD OE1 NE2 REMARK 470 ASP E 231 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OH TYR A 25 OD2 ASP B 102 2.14 REMARK 500 OH TYR C 25 OD2 ASP D 102 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LYR A 255 C - N - CA ANGL. DEV. = 17.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 17 -83.67 -123.51 REMARK 500 ASP A 54 173.44 -59.87 REMARK 500 ASP A 102 151.89 71.23 REMARK 500 ASN A 163 92.35 -171.39 REMARK 500 SER A 197 148.63 -39.06 REMARK 500 LEU A 227 7.20 -66.13 REMARK 500 THR A 228 38.78 -144.45 REMARK 500 TYR A 235 44.38 -103.28 REMARK 500 SER A 236 -159.00 -142.33 REMARK 500 LYR A 255 -76.41 -126.63 REMARK 500 GLU B 4 61.09 -101.94 REMARK 500 THR B 17 -74.23 -121.81 REMARK 500 ASP B 102 160.22 54.84 REMARK 500 GLU B 160 -2.10 -57.95 REMARK 500 VAL B 161 -50.56 -140.43 REMARK 500 ASN B 163 77.11 -156.13 REMARK 500 VAL B 169 -70.80 -55.31 REMARK 500 SER B 236 -162.27 -170.03 REMARK 500 VAL B 256 -70.28 -73.21 REMARK 500 THR B 268 3.78 -65.73 REMARK 500 THR C 17 -77.82 -126.71 REMARK 500 ASP C 102 152.48 67.79 REMARK 500 LEU C 130 -178.98 -68.84 REMARK 500 THR C 131 -48.08 -132.68 REMARK 500 VAL C 161 -56.28 -134.37 REMARK 500 MET C 224 -65.59 -13.73 REMARK 500 THR C 228 36.09 -148.21 REMARK 500 TYR C 235 49.22 -90.40 REMARK 500 THR D 17 -76.38 -136.98 REMARK 500 LYS D 51 -76.37 -55.62 REMARK 500 ASP D 102 151.68 65.36 REMARK 500 THR D 131 -97.90 -88.72 REMARK 500 GLU D 160 -4.39 -58.92 REMARK 500 VAL D 161 -42.65 -136.95 REMARK 500 SER D 197 159.73 -49.30 REMARK 500 TYR D 226 41.99 -104.98 REMARK 500 THR D 228 25.21 -150.66 REMARK 500 TYR D 235 55.86 -104.21 REMARK 500 VAL D 256 -72.47 -79.60 REMARK 500 THR E 17 -92.64 -122.67 REMARK 500 ASP E 102 148.31 68.85 REMARK 500 THR E 131 -56.45 -132.84 REMARK 500 ASN E 163 97.62 -170.43 REMARK 500 MET E 224 -65.88 -24.90 REMARK 500 THR E 228 42.96 -142.38 REMARK 500 TYR E 235 55.30 -93.04 REMARK 500 THR E 268 2.92 -57.35 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 LFA A 302 REMARK 610 LFA A 303 REMARK 610 LFA B 302 REMARK 610 LFA B 303 REMARK 610 LFA B 304 REMARK 610 LFA C 302 REMARK 610 LFA C 303 REMARK 610 LFA D 302 REMARK 610 LFA D 303 REMARK 610 LFA E 302 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 301 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TYR A 25 OH REMARK 620 2 THR A 83 O 95.2 REMARK 620 3 PHE A 86 O 101.4 98.2 REMARK 620 4 ASP B 102 OD1 90.5 150.6 108.8 REMARK 620 5 ASP B 102 OD2 47.6 119.8 129.6 48.5 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA E 301 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 102 OD1 REMARK 620 2 TYR E 25 OH 78.0 REMARK 620 3 THR E 83 O 139.1 78.1 REMARK 620 4 PHE E 86 O 116.8 90.5 96.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 301 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TYR B 25 OH REMARK 620 2 THR B 83 O 91.6 REMARK 620 3 PHE B 86 O 103.9 98.2 REMARK 620 4 ASP C 102 OD1 81.4 150.7 111.0 REMARK 620 5 ASP C 102 OD2 49.5 113.3 137.1 42.5 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA C 301 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TYR C 25 OH REMARK 620 2 THR C 83 O 72.1 REMARK 620 3 PHE C 86 O 81.0 84.6 REMARK 620 4 ASP D 102 OD1 76.3 146.0 102.8 REMARK 620 5 ASP D 102 OD2 40.2 102.6 109.4 43.4 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA D 301 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TYR D 25 OH REMARK 620 2 THR D 83 O 80.9 REMARK 620 3 PHE D 86 O 95.1 89.5 REMARK 620 4 ASP E 102 OD1 85.7 155.5 112.1 REMARK 620 5 ASP E 102 OD2 48.9 107.1 134.7 49.6 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue LFA A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue LFA A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue LFA B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue LFA B 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue LFA B 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA C 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA D 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue LFA D 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue LFA D 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA E 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue LFA E 302 DBREF 4XTO A 1 280 UNP N0DKS8 N0DKS8_9FLAO 1 280 DBREF 4XTO B 1 280 UNP N0DKS8 N0DKS8_9FLAO 1 280 DBREF 4XTO C 1 280 UNP N0DKS8 N0DKS8_9FLAO 1 280 DBREF 4XTO D 1 280 UNP N0DKS8 N0DKS8_9FLAO 1 280 DBREF 4XTO E 1 280 UNP N0DKS8 N0DKS8_9FLAO 1 280 SEQADV 4XTO LEU A 281 UNP N0DKS8 EXPRESSION TAG SEQADV 4XTO GLU A 282 UNP N0DKS8 EXPRESSION TAG SEQADV 4XTO HIS A 283 UNP N0DKS8 EXPRESSION TAG SEQADV 4XTO HIS A 284 UNP N0DKS8 EXPRESSION TAG SEQADV 4XTO HIS A 285 UNP N0DKS8 EXPRESSION TAG SEQADV 4XTO HIS A 286 UNP N0DKS8 EXPRESSION TAG SEQADV 4XTO HIS A 287 UNP N0DKS8 EXPRESSION TAG SEQADV 4XTO HIS A 288 UNP N0DKS8 EXPRESSION TAG SEQADV 4XTO LEU B 281 UNP N0DKS8 EXPRESSION TAG SEQADV 4XTO GLU B 282 UNP N0DKS8 EXPRESSION TAG SEQADV 4XTO HIS B 283 UNP N0DKS8 EXPRESSION TAG SEQADV 4XTO HIS B 284 UNP N0DKS8 EXPRESSION TAG SEQADV 4XTO HIS B 285 UNP N0DKS8 EXPRESSION TAG SEQADV 4XTO HIS B 286 UNP N0DKS8 EXPRESSION TAG SEQADV 4XTO HIS B 287 UNP N0DKS8 EXPRESSION TAG SEQADV 4XTO HIS B 288 UNP N0DKS8 EXPRESSION TAG SEQADV 4XTO LEU C 281 UNP N0DKS8 EXPRESSION TAG SEQADV 4XTO GLU C 282 UNP N0DKS8 EXPRESSION TAG SEQADV 4XTO HIS C 283 UNP N0DKS8 EXPRESSION TAG SEQADV 4XTO HIS C 284 UNP N0DKS8 EXPRESSION TAG SEQADV 4XTO HIS C 285 UNP N0DKS8 EXPRESSION TAG SEQADV 4XTO HIS C 286 UNP N0DKS8 EXPRESSION TAG SEQADV 4XTO HIS C 287 UNP N0DKS8 EXPRESSION TAG SEQADV 4XTO HIS C 288 UNP N0DKS8 EXPRESSION TAG SEQADV 4XTO LEU D 281 UNP N0DKS8 EXPRESSION TAG SEQADV 4XTO GLU D 282 UNP N0DKS8 EXPRESSION TAG SEQADV 4XTO HIS D 283 UNP N0DKS8 EXPRESSION TAG SEQADV 4XTO HIS D 284 UNP N0DKS8 EXPRESSION TAG SEQADV 4XTO HIS D 285 UNP N0DKS8 EXPRESSION TAG SEQADV 4XTO HIS D 286 UNP N0DKS8 EXPRESSION TAG SEQADV 4XTO HIS D 287 UNP N0DKS8 EXPRESSION TAG SEQADV 4XTO HIS D 288 UNP N0DKS8 EXPRESSION TAG SEQADV 4XTO LEU E 281 UNP N0DKS8 EXPRESSION TAG SEQADV 4XTO GLU E 282 UNP N0DKS8 EXPRESSION TAG SEQADV 4XTO HIS E 283 UNP N0DKS8 EXPRESSION TAG SEQADV 4XTO HIS E 284 UNP N0DKS8 EXPRESSION TAG SEQADV 4XTO HIS E 285 UNP N0DKS8 EXPRESSION TAG SEQADV 4XTO HIS E 286 UNP N0DKS8 EXPRESSION TAG SEQADV 4XTO HIS E 287 UNP N0DKS8 EXPRESSION TAG SEQADV 4XTO HIS E 288 UNP N0DKS8 EXPRESSION TAG SEQRES 1 A 288 MET THR GLN GLU LEU GLY ASN ALA ASN PHE GLU ASN PHE SEQRES 2 A 288 ILE GLY ALA THR GLU GLY PHE SER GLU ILE ALA TYR GLN SEQRES 3 A 288 PHE THR SER HIS ILE LEU THR LEU GLY TYR ALA VAL MET SEQRES 4 A 288 LEU ALA GLY LEU LEU TYR PHE ILE LEU THR ILE LYS ASN SEQRES 5 A 288 VAL ASP LYS LYS PHE GLN MET SER ASN ILE LEU SER ALA SEQRES 6 A 288 VAL VAL MET VAL SER ALA PHE LEU LEU LEU TYR ALA GLN SEQRES 7 A 288 ALA GLN ASN TRP THR SER SER PHE THR PHE ASN GLU GLU SEQRES 8 A 288 VAL GLY ARG TYR PHE LEU ASP PRO SER GLY ASP LEU PHE SEQRES 9 A 288 ASN ASN GLY TYR ARG TYR LEU ASN TRP LEU ILE ASP VAL SEQRES 10 A 288 PRO MET LEU LEU PHE GLN ILE LEU PHE VAL VAL SER LEU SEQRES 11 A 288 THR THR SER LYS PHE SER SER VAL ARG ASN GLN PHE TRP SEQRES 12 A 288 PHE SER GLY ALA MET MET ILE ILE THR GLY TYR ILE GLY SEQRES 13 A 288 GLN PHE TYR GLU VAL SER ASN LEU THR ALA PHE LEU VAL SEQRES 14 A 288 TRP GLY ALA ILE SER SER ALA PHE PHE PHE HIS ILE LEU SEQRES 15 A 288 TRP VAL MET LYS LYS VAL ILE ASN GLU GLY LYS GLU GLY SEQRES 16 A 288 ILE SER PRO ALA GLY GLN LYS ILE LEU SER ASN ILE TRP SEQRES 17 A 288 ILE LEU PHE LEU ILE SER TRP THR LEU TYR PRO GLY ALA SEQRES 18 A 288 TYR LEU MET PRO TYR LEU THR GLY VAL ASP GLY PHE LEU SEQRES 19 A 288 TYR SER GLU ASP GLY VAL MET ALA ARG GLN LEU VAL TYR SEQRES 20 A 288 THR ILE ALA ASP VAL SER SER LYR VAL ILE TYR GLY VAL SEQRES 21 A 288 LEU LEU GLY ASN LEU ALA ILE THR LEU SER LYS ASN LYS SEQRES 22 A 288 GLU LEU VAL GLU ALA ASN SER LEU GLU HIS HIS HIS HIS SEQRES 23 A 288 HIS HIS SEQRES 1 B 288 MET THR GLN GLU LEU GLY ASN ALA ASN PHE GLU ASN PHE SEQRES 2 B 288 ILE GLY ALA THR GLU GLY PHE SER GLU ILE ALA TYR GLN SEQRES 3 B 288 PHE THR SER HIS ILE LEU THR LEU GLY TYR ALA VAL MET SEQRES 4 B 288 LEU ALA GLY LEU LEU TYR PHE ILE LEU THR ILE LYS ASN SEQRES 5 B 288 VAL ASP LYS LYS PHE GLN MET SER ASN ILE LEU SER ALA SEQRES 6 B 288 VAL VAL MET VAL SER ALA PHE LEU LEU LEU TYR ALA GLN SEQRES 7 B 288 ALA GLN ASN TRP THR SER SER PHE THR PHE ASN GLU GLU SEQRES 8 B 288 VAL GLY ARG TYR PHE LEU ASP PRO SER GLY ASP LEU PHE SEQRES 9 B 288 ASN ASN GLY TYR ARG TYR LEU ASN TRP LEU ILE ASP VAL SEQRES 10 B 288 PRO MET LEU LEU PHE GLN ILE LEU PHE VAL VAL SER LEU SEQRES 11 B 288 THR THR SER LYS PHE SER SER VAL ARG ASN GLN PHE TRP SEQRES 12 B 288 PHE SER GLY ALA MET MET ILE ILE THR GLY TYR ILE GLY SEQRES 13 B 288 GLN PHE TYR GLU VAL SER ASN LEU THR ALA PHE LEU VAL SEQRES 14 B 288 TRP GLY ALA ILE SER SER ALA PHE PHE PHE HIS ILE LEU SEQRES 15 B 288 TRP VAL MET LYS LYS VAL ILE ASN GLU GLY LYS GLU GLY SEQRES 16 B 288 ILE SER PRO ALA GLY GLN LYS ILE LEU SER ASN ILE TRP SEQRES 17 B 288 ILE LEU PHE LEU ILE SER TRP THR LEU TYR PRO GLY ALA SEQRES 18 B 288 TYR LEU MET PRO TYR LEU THR GLY VAL ASP GLY PHE LEU SEQRES 19 B 288 TYR SER GLU ASP GLY VAL MET ALA ARG GLN LEU VAL TYR SEQRES 20 B 288 THR ILE ALA ASP VAL SER SER LYR VAL ILE TYR GLY VAL SEQRES 21 B 288 LEU LEU GLY ASN LEU ALA ILE THR LEU SER LYS ASN LYS SEQRES 22 B 288 GLU LEU VAL GLU ALA ASN SER LEU GLU HIS HIS HIS HIS SEQRES 23 B 288 HIS HIS SEQRES 1 C 288 MET THR GLN GLU LEU GLY ASN ALA ASN PHE GLU ASN PHE SEQRES 2 C 288 ILE GLY ALA THR GLU GLY PHE SER GLU ILE ALA TYR GLN SEQRES 3 C 288 PHE THR SER HIS ILE LEU THR LEU GLY TYR ALA VAL MET SEQRES 4 C 288 LEU ALA GLY LEU LEU TYR PHE ILE LEU THR ILE LYS ASN SEQRES 5 C 288 VAL ASP LYS LYS PHE GLN MET SER ASN ILE LEU SER ALA SEQRES 6 C 288 VAL VAL MET VAL SER ALA PHE LEU LEU LEU TYR ALA GLN SEQRES 7 C 288 ALA GLN ASN TRP THR SER SER PHE THR PHE ASN GLU GLU SEQRES 8 C 288 VAL GLY ARG TYR PHE LEU ASP PRO SER GLY ASP LEU PHE SEQRES 9 C 288 ASN ASN GLY TYR ARG TYR LEU ASN TRP LEU ILE ASP VAL SEQRES 10 C 288 PRO MET LEU LEU PHE GLN ILE LEU PHE VAL VAL SER LEU SEQRES 11 C 288 THR THR SER LYS PHE SER SER VAL ARG ASN GLN PHE TRP SEQRES 12 C 288 PHE SER GLY ALA MET MET ILE ILE THR GLY TYR ILE GLY SEQRES 13 C 288 GLN PHE TYR GLU VAL SER ASN LEU THR ALA PHE LEU VAL SEQRES 14 C 288 TRP GLY ALA ILE SER SER ALA PHE PHE PHE HIS ILE LEU SEQRES 15 C 288 TRP VAL MET LYS LYS VAL ILE ASN GLU GLY LYS GLU GLY SEQRES 16 C 288 ILE SER PRO ALA GLY GLN LYS ILE LEU SER ASN ILE TRP SEQRES 17 C 288 ILE LEU PHE LEU ILE SER TRP THR LEU TYR PRO GLY ALA SEQRES 18 C 288 TYR LEU MET PRO TYR LEU THR GLY VAL ASP GLY PHE LEU SEQRES 19 C 288 TYR SER GLU ASP GLY VAL MET ALA ARG GLN LEU VAL TYR SEQRES 20 C 288 THR ILE ALA ASP VAL SER SER LYR VAL ILE TYR GLY VAL SEQRES 21 C 288 LEU LEU GLY ASN LEU ALA ILE THR LEU SER LYS ASN LYS SEQRES 22 C 288 GLU LEU VAL GLU ALA ASN SER LEU GLU HIS HIS HIS HIS SEQRES 23 C 288 HIS HIS SEQRES 1 D 288 MET THR GLN GLU LEU GLY ASN ALA ASN PHE GLU ASN PHE SEQRES 2 D 288 ILE GLY ALA THR GLU GLY PHE SER GLU ILE ALA TYR GLN SEQRES 3 D 288 PHE THR SER HIS ILE LEU THR LEU GLY TYR ALA VAL MET SEQRES 4 D 288 LEU ALA GLY LEU LEU TYR PHE ILE LEU THR ILE LYS ASN SEQRES 5 D 288 VAL ASP LYS LYS PHE GLN MET SER ASN ILE LEU SER ALA SEQRES 6 D 288 VAL VAL MET VAL SER ALA PHE LEU LEU LEU TYR ALA GLN SEQRES 7 D 288 ALA GLN ASN TRP THR SER SER PHE THR PHE ASN GLU GLU SEQRES 8 D 288 VAL GLY ARG TYR PHE LEU ASP PRO SER GLY ASP LEU PHE SEQRES 9 D 288 ASN ASN GLY TYR ARG TYR LEU ASN TRP LEU ILE ASP VAL SEQRES 10 D 288 PRO MET LEU LEU PHE GLN ILE LEU PHE VAL VAL SER LEU SEQRES 11 D 288 THR THR SER LYS PHE SER SER VAL ARG ASN GLN PHE TRP SEQRES 12 D 288 PHE SER GLY ALA MET MET ILE ILE THR GLY TYR ILE GLY SEQRES 13 D 288 GLN PHE TYR GLU VAL SER ASN LEU THR ALA PHE LEU VAL SEQRES 14 D 288 TRP GLY ALA ILE SER SER ALA PHE PHE PHE HIS ILE LEU SEQRES 15 D 288 TRP VAL MET LYS LYS VAL ILE ASN GLU GLY LYS GLU GLY SEQRES 16 D 288 ILE SER PRO ALA GLY GLN LYS ILE LEU SER ASN ILE TRP SEQRES 17 D 288 ILE LEU PHE LEU ILE SER TRP THR LEU TYR PRO GLY ALA SEQRES 18 D 288 TYR LEU MET PRO TYR LEU THR GLY VAL ASP GLY PHE LEU SEQRES 19 D 288 TYR SER GLU ASP GLY VAL MET ALA ARG GLN LEU VAL TYR SEQRES 20 D 288 THR ILE ALA ASP VAL SER SER LYR VAL ILE TYR GLY VAL SEQRES 21 D 288 LEU LEU GLY ASN LEU ALA ILE THR LEU SER LYS ASN LYS SEQRES 22 D 288 GLU LEU VAL GLU ALA ASN SER LEU GLU HIS HIS HIS HIS SEQRES 23 D 288 HIS HIS SEQRES 1 E 288 MET THR GLN GLU LEU GLY ASN ALA ASN PHE GLU ASN PHE SEQRES 2 E 288 ILE GLY ALA THR GLU GLY PHE SER GLU ILE ALA TYR GLN SEQRES 3 E 288 PHE THR SER HIS ILE LEU THR LEU GLY TYR ALA VAL MET SEQRES 4 E 288 LEU ALA GLY LEU LEU TYR PHE ILE LEU THR ILE LYS ASN SEQRES 5 E 288 VAL ASP LYS LYS PHE GLN MET SER ASN ILE LEU SER ALA SEQRES 6 E 288 VAL VAL MET VAL SER ALA PHE LEU LEU LEU TYR ALA GLN SEQRES 7 E 288 ALA GLN ASN TRP THR SER SER PHE THR PHE ASN GLU GLU SEQRES 8 E 288 VAL GLY ARG TYR PHE LEU ASP PRO SER GLY ASP LEU PHE SEQRES 9 E 288 ASN ASN GLY TYR ARG TYR LEU ASN TRP LEU ILE ASP VAL SEQRES 10 E 288 PRO MET LEU LEU PHE GLN ILE LEU PHE VAL VAL SER LEU SEQRES 11 E 288 THR THR SER LYS PHE SER SER VAL ARG ASN GLN PHE TRP SEQRES 12 E 288 PHE SER GLY ALA MET MET ILE ILE THR GLY TYR ILE GLY SEQRES 13 E 288 GLN PHE TYR GLU VAL SER ASN LEU THR ALA PHE LEU VAL SEQRES 14 E 288 TRP GLY ALA ILE SER SER ALA PHE PHE PHE HIS ILE LEU SEQRES 15 E 288 TRP VAL MET LYS LYS VAL ILE ASN GLU GLY LYS GLU GLY SEQRES 16 E 288 ILE SER PRO ALA GLY GLN LYS ILE LEU SER ASN ILE TRP SEQRES 17 E 288 ILE LEU PHE LEU ILE SER TRP THR LEU TYR PRO GLY ALA SEQRES 18 E 288 TYR LEU MET PRO TYR LEU THR GLY VAL ASP GLY PHE LEU SEQRES 19 E 288 TYR SER GLU ASP GLY VAL MET ALA ARG GLN LEU VAL TYR SEQRES 20 E 288 THR ILE ALA ASP VAL SER SER LYR VAL ILE TYR GLY VAL SEQRES 21 E 288 LEU LEU GLY ASN LEU ALA ILE THR LEU SER LYS ASN LYS SEQRES 22 E 288 GLU LEU VAL GLU ALA ASN SER LEU GLU HIS HIS HIS HIS SEQRES 23 E 288 HIS HIS MODRES 4XTO LYR A 255 LYS MODIFIED RESIDUE MODRES 4XTO LYR B 255 LYS MODIFIED RESIDUE MODRES 4XTO LYR C 255 LYS MODIFIED RESIDUE MODRES 4XTO LYR D 255 LYS MODIFIED RESIDUE MODRES 4XTO LYR E 255 LYS MODIFIED RESIDUE HET LYR A 255 29 HET LYR B 255 29 HET LYR C 255 29 HET LYR D 255 29 HET LYR E 255 29 HET NA A 301 1 HET LFA A 302 8 HET LFA A 303 8 HET NA B 301 1 HET LFA B 302 8 HET LFA B 303 14 HET LFA B 304 14 HET NA C 301 1 HET LFA C 302 8 HET LFA C 303 12 HET NA D 301 1 HET LFA D 302 8 HET LFA D 303 14 HET NA E 301 1 HET LFA E 302 14 HETNAM LYR N~6~-[(2Z,4E,6E,8E)-3,7-DIMETHYL-9-(2,6,6- HETNAM 2 LYR TRIMETHYLCYCLOHEX-1-EN-1-YL)NONA-2,4,6,8- HETNAM 3 LYR TETRAENYL]LYSINE HETNAM NA SODIUM ION HETNAM LFA EICOSANE HETSYN LFA LIPID FRAGMENT FORMUL 1 LYR 5(C26 H42 N2 O2) FORMUL 6 NA 5(NA 1+) FORMUL 7 LFA 10(C20 H42) FORMUL 21 HOH *15(H2 O) HELIX 1 AA1 ASN A 9 THR A 17 1 9 HELIX 2 AA2 SER A 21 THR A 49 1 29 HELIX 3 AA3 ILE A 50 VAL A 53 5 4 HELIX 4 AA4 ASP A 54 LYS A 56 5 3 HELIX 5 AA5 PHE A 57 SER A 85 1 29 HELIX 6 AA6 PRO A 99 ASP A 102 5 4 HELIX 7 AA7 ASN A 106 GLN A 123 1 18 HELIX 8 AA8 ILE A 124 VAL A 127 5 4 HELIX 9 AA9 LYS A 134 PHE A 158 1 25 HELIX 10 AB1 ASN A 163 GLU A 194 1 32 HELIX 11 AB2 SER A 197 MET A 224 1 28 HELIX 12 AB3 PRO A 225 LEU A 227 5 3 HELIX 13 AB4 SER A 236 LEU A 269 1 34 HELIX 14 AB5 ASN B 9 ALA B 16 1 8 HELIX 15 AB6 SER B 21 THR B 49 1 29 HELIX 16 AB7 ILE B 50 VAL B 53 5 4 HELIX 17 AB8 PHE B 57 SER B 85 1 29 HELIX 18 AB9 PRO B 99 ASP B 102 5 4 HELIX 19 AC1 ASN B 106 ILE B 124 1 19 HELIX 20 AC2 LEU B 125 VAL B 127 5 3 HELIX 21 AC3 LYS B 134 GLN B 157 1 24 HELIX 22 AC4 PHE B 158 GLU B 160 5 3 HELIX 23 AC5 ASN B 163 GLU B 194 1 32 HELIX 24 AC6 ALA B 199 LEU B 223 1 25 HELIX 25 AC7 MET B 224 GLY B 229 5 6 HELIX 26 AC8 SER B 236 THR B 268 1 33 HELIX 27 AC9 ASN C 9 ALA C 16 1 8 HELIX 28 AD1 SER C 21 THR C 49 1 29 HELIX 29 AD2 ILE C 50 VAL C 53 5 4 HELIX 30 AD3 GLN C 58 SER C 85 1 28 HELIX 31 AD4 PRO C 99 ASP C 102 5 4 HELIX 32 AD5 ASN C 106 ILE C 124 1 19 HELIX 33 AD6 LEU C 125 VAL C 127 5 3 HELIX 34 AD7 LYS C 134 GLN C 157 1 24 HELIX 35 AD8 PHE C 158 GLU C 160 5 3 HELIX 36 AD9 ASN C 163 GLU C 194 1 32 HELIX 37 AE1 SER C 197 MET C 224 1 28 HELIX 38 AE2 PRO C 225 LEU C 227 5 3 HELIX 39 AE3 SER C 236 LEU C 269 1 34 HELIX 40 AE4 ASN D 9 ALA D 16 1 8 HELIX 41 AE5 SER D 21 THR D 49 1 29 HELIX 42 AE6 PHE D 57 SER D 85 1 29 HELIX 43 AE7 PRO D 99 ASP D 102 5 4 HELIX 44 AE8 ASN D 106 LEU D 125 1 20 HELIX 45 AE9 LYS D 134 GLN D 157 1 24 HELIX 46 AF1 PHE D 158 GLU D 160 5 3 HELIX 47 AF2 ASN D 163 GLU D 194 1 32 HELIX 48 AF3 SER D 197 LEU D 223 1 27 HELIX 49 AF4 MET D 224 LEU D 227 5 4 HELIX 50 AF5 SER D 236 LEU D 269 1 34 HELIX 51 AF6 ASN E 9 GLY E 15 1 7 HELIX 52 AF7 GLU E 22 THR E 49 1 28 HELIX 53 AF8 ILE E 50 VAL E 53 5 4 HELIX 54 AF9 PHE E 57 SER E 85 1 29 HELIX 55 AG1 PRO E 99 ASP E 102 5 4 HELIX 56 AG2 ASN E 106 ILE E 124 1 19 HELIX 57 AG3 LEU E 125 VAL E 127 5 3 HELIX 58 AG4 LYS E 134 GLN E 157 1 24 HELIX 59 AG5 ASN E 163 GLU E 194 1 32 HELIX 60 AG6 SER E 197 MET E 224 1 28 HELIX 61 AG7 PRO E 225 LEU E 227 5 3 HELIX 62 AG8 SER E 236 THR E 268 1 33 SHEET 1 AA1 2 PHE A 86 PHE A 88 0 SHEET 2 AA1 2 TYR A 95 LEU A 97 -1 O PHE A 96 N THR A 87 SHEET 1 AA2 2 PHE B 86 PHE B 88 0 SHEET 2 AA2 2 TYR B 95 LEU B 97 -1 O PHE B 96 N THR B 87 SHEET 1 AA3 2 PHE C 86 PHE C 88 0 SHEET 2 AA3 2 TYR C 95 LEU C 97 -1 O PHE C 96 N THR C 87 SHEET 1 AA4 2 PHE D 86 ASN D 89 0 SHEET 2 AA4 2 ARG D 94 LEU D 97 -1 O PHE D 96 N THR D 87 SHEET 1 AA5 3 PHE E 20 SER E 21 0 SHEET 2 AA5 3 ARG E 94 LEU E 97 -1 O TYR E 95 N PHE E 20 SHEET 3 AA5 3 PHE E 86 ASN E 89 -1 N THR E 87 O PHE E 96 LINK C SER A 254 N LYR A 255 1555 1555 1.33 LINK C LYR A 255 N VAL A 256 1555 1555 1.33 LINK C SER B 254 N LYR B 255 1555 1555 1.33 LINK C LYR B 255 N VAL B 256 1555 1555 1.33 LINK C SER C 254 N LYR C 255 1555 1555 1.33 LINK C LYR C 255 N VAL C 256 1555 1555 1.33 LINK C SER D 254 N LYR D 255 1555 1555 1.33 LINK C LYR D 255 N VAL D 256 1555 1555 1.33 LINK C SER E 254 N LYR E 255 1555 1555 1.33 LINK C LYR E 255 N VAL E 256 1555 1555 1.33 LINK OH TYR A 25 NA NA A 301 1555 1555 2.54 LINK O THR A 83 NA NA A 301 1555 1555 2.18 LINK O PHE A 86 NA NA A 301 1555 1555 2.33 LINK OD1 ASP A 102 NA NA E 301 1555 1555 2.61 LINK NA NA A 301 OD1 ASP B 102 1555 1555 2.60 LINK NA NA A 301 OD2 ASP B 102 1555 1555 2.75 LINK OH TYR B 25 NA NA B 301 1555 1555 2.66 LINK O THR B 83 NA NA B 301 1555 1555 2.11 LINK O PHE B 86 NA NA B 301 1555 1555 2.28 LINK NA NA B 301 OD1 ASP C 102 1555 1555 2.80 LINK NA NA B 301 OD2 ASP C 102 1555 1555 3.19 LINK OH TYR C 25 NA NA C 301 1555 1555 3.14 LINK O THR C 83 NA NA C 301 1555 1555 2.34 LINK O PHE C 86 NA NA C 301 1555 1555 2.53 LINK NA NA C 301 OD1 ASP D 102 1555 1555 2.53 LINK NA NA C 301 OD2 ASP D 102 1555 1555 3.19 LINK OH TYR D 25 NA NA D 301 1555 1555 2.67 LINK O THR D 83 NA NA D 301 1555 1555 2.25 LINK O PHE D 86 NA NA D 301 1555 1555 2.45 LINK NA NA D 301 OD1 ASP E 102 1555 1555 2.38 LINK NA NA D 301 OD2 ASP E 102 1555 1555 2.79 LINK OH TYR E 25 NA NA E 301 1555 1555 2.99 LINK O THR E 83 NA NA E 301 1555 1555 2.17 LINK O PHE E 86 NA NA E 301 1555 1555 2.25 SITE 1 AC1 4 TYR A 25 THR A 83 PHE A 86 ASP B 102 SITE 1 AC2 2 LEU A 63 VAL E 256 SITE 1 AC3 2 TYR A 45 VAL A 256 SITE 1 AC4 4 TYR B 25 THR B 83 PHE B 86 ASP C 102 SITE 1 AC5 1 TYR B 45 SITE 1 AC6 2 ILE B 47 LFA E 302 SITE 1 AC7 1 LEU B 44 SITE 1 AC8 4 TYR C 25 THR C 83 PHE C 86 ASP D 102 SITE 1 AC9 4 TYR D 25 THR D 83 PHE D 86 ASP E 102 SITE 1 AD1 2 TYR D 45 PHE E 122 SITE 1 AD2 1 ILE D 47 SITE 1 AD3 4 ASP A 102 TYR E 25 THR E 83 PHE E 86 SITE 1 AD4 1 LFA B 303 CRYST1 127.100 238.980 132.480 90.00 90.00 90.00 C 2 2 21 40 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007868 0.000000 0.000000 0.00000 SCALE2 0.000000 0.004184 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007548 0.00000