data_4XW7 # _entry.id 4XW7 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4XW7 pdb_00004xw7 10.2210/pdb4xw7/pdb WWPDB D_1000206332 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-09-09 2 'Structure model' 1 1 2017-09-27 3 'Structure model' 1 2 2019-12-25 4 'Structure model' 1 3 2024-02-28 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Author supporting evidence' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Derived calculations' 4 2 'Structure model' 'Refinement description' 5 3 'Structure model' 'Author supporting evidence' 6 4 'Structure model' 'Data collection' 7 4 'Structure model' 'Database references' 8 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' pdbx_audit_support 3 2 'Structure model' pdbx_struct_oper_list 4 2 'Structure model' software 5 3 'Structure model' pdbx_audit_support 6 4 'Structure model' chem_comp_atom 7 4 'Structure model' chem_comp_bond 8 4 'Structure model' database_2 9 4 'Structure model' pdbx_struct_conn_angle 10 4 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_id_CSD' 2 2 'Structure model' '_pdbx_audit_support.funding_organization' 3 2 'Structure model' '_pdbx_struct_oper_list.symmetry_operation' 4 3 'Structure model' '_pdbx_audit_support.funding_organization' 5 4 'Structure model' '_database_2.pdbx_DOI' 6 4 'Structure model' '_database_2.pdbx_database_accession' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.value' 10 4 'Structure model' '_struct_conn.pdbx_dist_value' 11 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 4XW7 _pdbx_database_status.recvd_initial_deposition_date 2015-01-28 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # _pdbx_database_related.content_type unspecified _pdbx_database_related.db_id 4XWF _pdbx_database_related.db_name PDB _pdbx_database_related.details . # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Trausch, J.J.' 1 'Batey, R.T.' 2 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Chem.Biol. _citation.journal_id_ASTM CBOLE2 _citation.journal_id_CSD 2050 _citation.journal_id_ISSN 1074-5521 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 22 _citation.language ? _citation.page_first 829 _citation.page_last 837 _citation.title 'Metal Ion-Mediated Nucleobase Recognition by the ZTP Riboswitch.' _citation.year 2015 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.chembiol.2015.06.007 _citation.pdbx_database_id_PubMed 26144884 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Trausch, J.J.' 1 ? primary 'Marcano-Velazquez, J.G.' 2 ? primary 'Matyjasik, M.M.' 3 ? primary 'Batey, R.T.' 4 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'pfl RNA' 20782.453 1 ? ? ? ? 2 non-polymer syn 'AMINOIMIDAZOLE 4-CARBOXAMIDE RIBONUCLEOTIDE' 338.211 1 ? ? ? ? 3 non-polymer syn 'MAGNESIUM ION' 24.305 13 ? ? ? ? 4 non-polymer syn 'IRIDIUM HEXAMMINE ION' 294.400 4 ? ? ? ? 5 water nat water 18.015 31 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code GGGUCGUGACUGGCGAACAGGUGGGAAACCACCGGGGAGCGACCCUUGCCGCCCGCCUGGGCAA _entity_poly.pdbx_seq_one_letter_code_can GGGUCGUGACUGGCGAACAGGUGGGAAACCACCGGGGAGCGACCCUUGCCGCCCGCCUGGGCAA _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'AMINOIMIDAZOLE 4-CARBOXAMIDE RIBONUCLEOTIDE' AMZ 3 'MAGNESIUM ION' MG 4 'IRIDIUM HEXAMMINE ION' IRI 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 G n 1 2 G n 1 3 G n 1 4 U n 1 5 C n 1 6 G n 1 7 U n 1 8 G n 1 9 A n 1 10 C n 1 11 U n 1 12 G n 1 13 G n 1 14 C n 1 15 G n 1 16 A n 1 17 A n 1 18 C n 1 19 A n 1 20 G n 1 21 G n 1 22 U n 1 23 G n 1 24 G n 1 25 G n 1 26 A n 1 27 A n 1 28 A n 1 29 C n 1 30 C n 1 31 A n 1 32 C n 1 33 C n 1 34 G n 1 35 G n 1 36 G n 1 37 G n 1 38 A n 1 39 G n 1 40 C n 1 41 G n 1 42 A n 1 43 C n 1 44 C n 1 45 C n 1 46 U n 1 47 U n 1 48 G n 1 49 C n 1 50 C n 1 51 G n 1 52 C n 1 53 C n 1 54 C n 1 55 G n 1 56 C n 1 57 C n 1 58 U n 1 59 G n 1 60 G n 1 61 G n 1 62 C n 1 63 A n 1 64 A n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 64 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Actinomyces odontolyticus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1660 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Enterobacteria phage T7' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 10760 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 AMZ non-polymer . 'AMINOIMIDAZOLE 4-CARBOXAMIDE RIBONUCLEOTIDE' AICAR 'C9 H15 N4 O8 P' 338.211 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 HOH non-polymer . WATER ? 'H2 O' 18.015 IRI non-polymer . 'IRIDIUM HEXAMMINE ION' ? 'H18 Ir N6 3' 294.400 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 G 1 1 1 G G A . n A 1 2 G 2 2 2 G G A . n A 1 3 G 3 3 3 G G A . n A 1 4 U 4 4 4 U U A . n A 1 5 C 5 5 5 C C A . n A 1 6 G 6 6 6 G G A . n A 1 7 U 7 7 7 U U A . n A 1 8 G 8 8 8 G G A . n A 1 9 A 9 9 9 A A A . n A 1 10 C 10 10 10 C C A . n A 1 11 U 11 11 11 U U A . n A 1 12 G 12 12 12 G G A . n A 1 13 G 13 13 13 G G A . n A 1 14 C 14 14 14 C C A . n A 1 15 G 15 15 15 G G A . n A 1 16 A 16 16 16 A A A . n A 1 17 A 17 17 17 A A A . n A 1 18 C 18 18 18 C C A . n A 1 19 A 19 19 19 A A A . n A 1 20 G 20 20 20 G G A . n A 1 21 G 21 21 21 G G A . n A 1 22 U 22 22 22 U U A . n A 1 23 G 23 23 23 G G A . n A 1 24 G 24 24 24 G G A . n A 1 25 G 25 25 25 G G A . n A 1 26 A 26 26 26 A A A . n A 1 27 A 27 27 27 A A A . n A 1 28 A 28 28 28 A A A . n A 1 29 C 29 29 29 C C A . n A 1 30 C 30 30 30 C C A . n A 1 31 A 31 31 31 A A A . n A 1 32 C 32 32 32 C C A . n A 1 33 C 33 33 33 C C A . n A 1 34 G 34 34 34 G G A . n A 1 35 G 35 35 35 G G A . n A 1 36 G 36 36 36 G G A . n A 1 37 G 37 37 37 G G A . n A 1 38 A 38 38 38 A A A . n A 1 39 G 39 39 39 G G A . n A 1 40 C 40 40 40 C C A . n A 1 41 G 41 41 41 G G A . n A 1 42 A 42 42 42 A A A . n A 1 43 C 43 43 43 C C A . n A 1 44 C 44 44 44 C C A . n A 1 45 C 45 45 45 C C A . n A 1 46 U 46 46 46 U U A . n A 1 47 U 47 47 47 U U A . n A 1 48 G 48 48 48 G G A . n A 1 49 C 49 49 49 C C A . n A 1 50 C 50 50 50 C C A . n A 1 51 G 51 51 51 G G A . n A 1 52 C 52 52 52 C C A . n A 1 53 C 53 53 53 C C A . n A 1 54 C 54 54 54 C C A . n A 1 55 G 55 55 55 G G A . n A 1 56 C 56 56 56 C C A . n A 1 57 C 57 57 57 C C A . n A 1 58 U 58 58 58 U U A . n A 1 59 G 59 59 59 G G A . n A 1 60 G 60 60 60 G G A . n A 1 61 G 61 61 61 G G A . n A 1 62 C 62 62 62 C C A . n A 1 63 A 63 63 63 A A A . n A 1 64 A 64 64 64 A A A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 AMZ 1 101 101 AMZ AMZ A . C 3 MG 1 102 201 MG MG A . D 3 MG 1 103 202 MG MG A . E 3 MG 1 104 203 MG MG A . F 3 MG 1 105 204 MG MG A . G 3 MG 1 106 205 MG MG A . H 3 MG 1 107 206 MG MG A . I 3 MG 1 108 207 MG MG A . J 3 MG 1 109 208 MG MG A . K 3 MG 1 110 209 MG MG A . L 3 MG 1 111 210 MG MG A . M 3 MG 1 112 211 MG MG A . N 3 MG 1 113 212 MG MG A . O 3 MG 1 114 213 MG MG A . P 4 IRI 1 115 301 IRI IRI A . Q 4 IRI 1 116 302 IRI IRI A . R 4 IRI 1 117 303 IRI IRI A . S 4 IRI 1 118 304 IRI IRI A . T 5 HOH 1 401 401 HOH HOH A . T 5 HOH 2 402 424 HOH HOH A . T 5 HOH 3 403 423 HOH HOH A . T 5 HOH 4 404 409 HOH HOH A . T 5 HOH 5 405 431 HOH HOH A . T 5 HOH 6 406 405 HOH HOH A . T 5 HOH 7 407 417 HOH HOH A . T 5 HOH 8 408 413 HOH HOH A . T 5 HOH 9 409 406 HOH HOH A . T 5 HOH 10 410 411 HOH HOH A . T 5 HOH 11 411 416 HOH HOH A . T 5 HOH 12 412 407 HOH HOH A . T 5 HOH 13 413 430 HOH HOH A . T 5 HOH 14 414 426 HOH HOH A . T 5 HOH 15 415 402 HOH HOH A . T 5 HOH 16 416 403 HOH HOH A . T 5 HOH 17 417 404 HOH HOH A . T 5 HOH 18 418 408 HOH HOH A . T 5 HOH 19 419 410 HOH HOH A . T 5 HOH 20 420 412 HOH HOH A . T 5 HOH 21 421 414 HOH HOH A . T 5 HOH 22 422 415 HOH HOH A . T 5 HOH 23 423 418 HOH HOH A . T 5 HOH 24 424 419 HOH HOH A . T 5 HOH 25 425 420 HOH HOH A . T 5 HOH 26 426 421 HOH HOH A . T 5 HOH 27 427 422 HOH HOH A . T 5 HOH 28 428 425 HOH HOH A . T 5 HOH 29 429 427 HOH HOH A . T 5 HOH 30 430 428 HOH HOH A . T 5 HOH 31 431 429 HOH HOH A . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(phenix.refine: 1.9_1692)' 1 ? 'data collection' ? ? ? ? ? ? ? ? ? ? ? CrystalClear ? ? ? . 2 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? MOSFLM ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 4XW7 _cell.details ? _cell.formula_units_Z ? _cell.length_a 40.160 _cell.length_a_esd ? _cell.length_b 40.160 _cell.length_b_esd ? _cell.length_c 234.910 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 4XW7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 4XW7 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.28 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 46.02 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 303.15 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details 'PEG 8K, ammonium acetate, Magnesium acetate, cacodylate' _exptl_crystal_grow.pdbx_pH_range 7.0 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'RIGAKU RAXIS IV++' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2014-10-14 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.54 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source 'ROTATING ANODE' _diffrn_source.target ? _diffrn_source.type 'RIGAKU MICROMAX-007' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.54 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_synchrotron_site ? # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 4XW7 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.50 _reflns.d_resolution_low 30.53 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 7349 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.3 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 7.8 _reflns.pdbx_Rmerge_I_obs 0.062 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 4.2 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.Rmerge_I_obs 0.159 _reflns_shell.d_res_high 2.5 _reflns_shell.d_res_low ? _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_sigI_obs 4.2 _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_gt ? _reflns_shell.number_measured_obs 725 _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_gt ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_CC_half 0.979 _reflns_shell.pdbx_R_split ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_redundancy 5.5 _reflns_shell.pdbx_rejects ? _reflns_shell.percent_possible_all 93.9 _reflns_shell.percent_possible_gt ? _reflns_shell.percent_possible_obs ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 4XW7 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.500 _refine.ls_d_res_low 25.565 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 7144 _refine.ls_number_reflns_R_free 720 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 97.17 _refine.ls_percent_reflns_R_free 10.08 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2520 _refine.ls_R_factor_R_free 0.2735 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2495 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.00 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values MLHL _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 28.48 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.41 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 1379 _refine_hist.pdbx_number_atoms_ligand 63 _refine_hist.number_atoms_solvent 31 _refine_hist.number_atoms_total 1473 _refine_hist.d_res_high 2.500 _refine_hist.d_res_low 25.565 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.001 ? 1590 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.421 ? 2502 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 12.439 ? 767 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.021 ? 324 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.002 ? 66 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.5001 2.6930 . . 128 1158 91.00 . . . 0.4434 . 0.3813 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.6930 2.9636 . . 139 1228 97.00 . . . 0.4198 . 0.3588 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.9636 3.3916 . . 143 1276 98.00 . . . 0.2686 . 0.2628 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.3916 4.2698 . . 149 1326 100.00 . . . 0.2124 . 0.2096 . . . . . . . . . . 'X-RAY DIFFRACTION' 4.2698 25.5668 . . 161 1436 100.00 . . . 0.2446 . 0.2090 . . . . . . . . . . # _struct.entry_id 4XW7 _struct.title 'Crystal structure of the ZMP riboswitch at 2.50 angstrom' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 4XW7 _struct_keywords.text 'RNA, Riboswitch, ZMP, AICAR' _struct_keywords.pdbx_keywords RNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 3 ? I N N 3 ? J N N 3 ? K N N 3 ? L N N 3 ? M N N 3 ? N N N 3 ? O N N 3 ? P N N 4 ? Q N N 4 ? R N N 4 ? S N N 4 ? T N N 5 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 4XW7 _struct_ref.pdbx_db_accession 4XW7 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4XW7 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 64 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 4XW7 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 64 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 64 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A U 11 OP1 ? ? ? 1_555 C MG . MG ? ? A U 11 A MG 102 1_555 ? ? ? ? ? ? ? 2.011 ? ? metalc2 metalc ? ? A A 19 "O4'" ? ? ? 1_555 L MG . MG ? ? A A 19 A MG 111 1_555 ? ? ? ? ? ? ? 2.880 ? ? metalc3 metalc ? ? A G 21 OP2 ? ? ? 1_555 I MG . MG ? ? A G 21 A MG 108 1_555 ? ? ? ? ? ? ? 2.960 ? ? metalc4 metalc ? ? A G 21 O6 ? ? ? 1_555 J MG . MG ? ? A G 21 A MG 109 1_555 ? ? ? ? ? ? ? 2.650 ? ? metalc5 metalc ? ? A C 29 OP2 ? ? ? 1_555 C MG . MG ? ? A C 29 A MG 102 1_555 ? ? ? ? ? ? ? 2.124 ? ? metalc6 metalc ? ? A G 39 OP1 ? ? ? 1_555 F MG . MG ? ? A G 39 A MG 105 1_555 ? ? ? ? ? ? ? 2.832 ? ? metalc7 metalc ? ? A U 47 OP2 ? ? ? 1_555 O MG . MG ? ? A U 47 A MG 114 1_555 ? ? ? ? ? ? ? 2.928 ? ? metalc8 metalc ? ? A C 52 O2 ? ? ? 1_555 M MG . MG ? ? A C 52 A MG 112 1_555 ? ? ? ? ? ? ? 2.181 ? ? metalc9 metalc ? ? B AMZ . O5 ? ? ? 1_555 C MG . MG ? ? A AMZ 101 A MG 102 1_555 ? ? ? ? ? ? ? 2.844 ? ? metalc10 metalc ? ? C MG . MG ? ? ? 1_555 T HOH . O ? ? A MG 102 A HOH 401 1_555 ? ? ? ? ? ? ? 2.312 ? ? metalc11 metalc ? ? H MG . MG ? ? ? 1_555 T HOH . O ? ? A MG 107 A HOH 415 1_555 ? ? ? ? ? ? ? 2.797 ? ? metalc12 metalc ? ? H MG . MG ? ? ? 1_555 T HOH . O ? ? A MG 107 A HOH 416 1_555 ? ? ? ? ? ? ? 2.096 ? ? metalc13 metalc ? ? H MG . MG ? ? ? 1_555 T HOH . O ? ? A MG 107 A HOH 417 1_555 ? ? ? ? ? ? ? 2.140 ? ? metalc14 metalc ? ? M MG . MG ? ? ? 1_555 T HOH . O ? ? A MG 112 A HOH 406 1_555 ? ? ? ? ? ? ? 2.602 ? ? metalc15 metalc ? ? M MG . MG ? ? ? 1_555 T HOH . O ? ? A MG 112 A HOH 409 1_555 ? ? ? ? ? ? ? 2.534 ? ? metalc16 metalc ? ? M MG . MG ? ? ? 1_555 T HOH . O ? ? A MG 112 A HOH 412 1_555 ? ? ? ? ? ? ? 2.471 ? ? metalc17 metalc ? ? M MG . MG ? ? ? 1_555 T HOH . O ? ? A MG 112 A HOH 418 1_555 ? ? ? ? ? ? ? 2.279 ? ? hydrog1 hydrog ? ? A G 1 N1 ? ? ? 1_555 A C 45 N3 ? ? A G 1 A C 45 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A G 1 N2 ? ? ? 1_555 A C 45 O2 ? ? A G 1 A C 45 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A G 1 O6 ? ? ? 1_555 A C 45 N4 ? ? A G 1 A C 45 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A G 2 N1 ? ? ? 1_555 A C 44 N3 ? ? A G 2 A C 44 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A G 2 N2 ? ? ? 1_555 A C 44 O2 ? ? A G 2 A C 44 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A G 2 O6 ? ? ? 1_555 A C 44 N4 ? ? A G 2 A C 44 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A G 3 N1 ? ? ? 1_555 A C 43 N3 ? ? A G 3 A C 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A G 3 N2 ? ? ? 1_555 A C 43 O2 ? ? A G 3 A C 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A G 3 O6 ? ? ? 1_555 A C 43 N4 ? ? A G 3 A C 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A U 4 N3 ? ? ? 1_555 A A 42 N1 ? ? A U 4 A A 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A U 4 O4 ? ? ? 1_555 A A 42 N6 ? ? A U 4 A A 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A C 5 N3 ? ? ? 1_555 A G 41 N1 ? ? A C 5 A G 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A C 5 N4 ? ? ? 1_555 A G 41 O6 ? ? A C 5 A G 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A C 5 O2 ? ? ? 1_555 A G 41 N2 ? ? A C 5 A G 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A G 6 N1 ? ? ? 1_555 A C 40 N3 ? ? A G 6 A C 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A G 6 N2 ? ? ? 1_555 A C 40 O2 ? ? A G 6 A C 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A G 6 O6 ? ? ? 1_555 A C 40 N4 ? ? A G 6 A C 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A U 7 N3 ? ? ? 1_555 A G 39 O6 ? ? A U 7 A G 39 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog19 hydrog ? ? A U 7 O2 ? ? ? 1_555 A G 39 N1 ? ? A U 7 A G 39 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog20 hydrog ? ? A G 8 N2 ? ? ? 1_555 A A 38 N7 ? ? A G 8 A A 38 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog21 hydrog ? ? A G 8 N3 ? ? ? 1_555 A A 38 N6 ? ? A G 8 A A 38 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog22 hydrog ? ? A A 9 N6 ? ? ? 1_555 A G 37 N3 ? ? A A 9 A G 37 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog23 hydrog ? ? A A 9 N7 ? ? ? 1_555 A G 37 N2 ? ? A A 9 A G 37 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog24 hydrog ? ? A C 10 N3 ? ? ? 1_555 A G 36 N1 ? ? A C 10 A G 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A C 10 N4 ? ? ? 1_555 A G 36 O6 ? ? A C 10 A G 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A C 10 O2 ? ? ? 1_555 A G 36 N2 ? ? A C 10 A G 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A U 11 N3 ? ? ? 1_555 A G 35 O6 ? ? A U 11 A G 35 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog28 hydrog ? ? A U 11 O2 ? ? ? 1_555 A G 35 N1 ? ? A U 11 A G 35 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog29 hydrog ? ? A G 12 N2 ? ? ? 1_555 A A 28 N3 ? ? A G 12 A A 28 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog30 hydrog ? ? A A 19 N3 ? ? ? 1_555 A G 34 N2 ? ? A A 19 A G 34 1_555 ? ? ? ? ? ? 'A-G MISPAIR' ? ? ? hydrog31 hydrog ? ? A G 20 N1 ? ? ? 1_555 A C 33 N3 ? ? A G 20 A C 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A G 20 N2 ? ? ? 1_555 A C 33 O2 ? ? A G 20 A C 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A G 20 O6 ? ? ? 1_555 A C 33 N4 ? ? A G 20 A C 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A G 21 N1 ? ? ? 1_555 A C 32 N3 ? ? A G 21 A C 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A G 21 N2 ? ? ? 1_555 A C 32 O2 ? ? A G 21 A C 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A G 21 O6 ? ? ? 1_555 A C 32 N4 ? ? A G 21 A C 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A U 22 N3 ? ? ? 1_555 A A 31 N1 ? ? A U 22 A A 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A U 22 O4 ? ? ? 1_555 A A 31 N6 ? ? A U 22 A A 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A G 23 N1 ? ? ? 1_555 A C 30 N3 ? ? A G 23 A C 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A G 23 N2 ? ? ? 1_555 A C 30 O2 ? ? A G 23 A C 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A G 23 O6 ? ? ? 1_555 A C 30 N4 ? ? A G 23 A C 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A G 24 N1 ? ? ? 1_555 A C 29 N3 ? ? A G 24 A C 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? A G 24 N2 ? ? ? 1_555 A C 29 O2 ? ? A G 24 A C 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? A G 24 O6 ? ? ? 1_555 A C 29 N4 ? ? A G 24 A C 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? A U 46 N3 ? ? ? 1_555 A A 64 N1 ? ? A U 46 A A 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? A U 46 O4 ? ? ? 1_555 A A 64 N6 ? ? A U 46 A A 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? A U 47 N3 ? ? ? 1_555 A A 63 N1 ? ? A U 47 A A 63 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? A U 47 O4 ? ? ? 1_555 A A 63 N6 ? ? A U 47 A A 63 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? A G 48 N1 ? ? ? 1_555 A C 62 N3 ? ? A G 48 A C 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? A G 48 N2 ? ? ? 1_555 A C 62 O2 ? ? A G 48 A C 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? A G 48 O6 ? ? ? 1_555 A C 62 N4 ? ? A G 48 A C 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? A C 49 N3 ? ? ? 1_555 A G 61 N1 ? ? A C 49 A G 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? A C 49 N4 ? ? ? 1_555 A G 61 O6 ? ? A C 49 A G 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? A C 49 O2 ? ? ? 1_555 A G 61 N2 ? ? A C 49 A G 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? A C 50 N3 ? ? ? 1_555 A G 60 N1 ? ? A C 50 A G 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? A C 50 N4 ? ? ? 1_555 A G 60 O6 ? ? A C 50 A G 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? A C 50 O2 ? ? ? 1_555 A G 60 N2 ? ? A C 50 A G 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? A G 51 O6 ? ? ? 1_555 A G 59 N1 ? ? A G 51 A G 59 1_555 ? ? ? ? ? ? 'G-G MISPAIR' ? ? ? hydrog59 hydrog ? ? A G 51 O6 ? ? ? 1_555 A G 60 N1 ? ? A G 51 A G 60 1_555 ? ? ? ? ? ? 'G-G MISPAIR' ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OP1 ? A U 11 ? A U 11 ? 1_555 MG ? C MG . ? A MG 102 ? 1_555 OP2 ? A C 29 ? A C 29 ? 1_555 139.3 ? 2 OP1 ? A U 11 ? A U 11 ? 1_555 MG ? C MG . ? A MG 102 ? 1_555 O5 ? B AMZ . ? A AMZ 101 ? 1_555 67.4 ? 3 OP2 ? A C 29 ? A C 29 ? 1_555 MG ? C MG . ? A MG 102 ? 1_555 O5 ? B AMZ . ? A AMZ 101 ? 1_555 77.8 ? 4 OP1 ? A U 11 ? A U 11 ? 1_555 MG ? C MG . ? A MG 102 ? 1_555 O ? T HOH . ? A HOH 401 ? 1_555 72.8 ? 5 OP2 ? A C 29 ? A C 29 ? 1_555 MG ? C MG . ? A MG 102 ? 1_555 O ? T HOH . ? A HOH 401 ? 1_555 69.2 ? 6 O5 ? B AMZ . ? A AMZ 101 ? 1_555 MG ? C MG . ? A MG 102 ? 1_555 O ? T HOH . ? A HOH 401 ? 1_555 51.6 ? 7 O2 ? A C 52 ? A C 52 ? 1_555 MG ? M MG . ? A MG 112 ? 1_555 O ? T HOH . ? A HOH 406 ? 1_555 166.9 ? 8 O2 ? A C 52 ? A C 52 ? 1_555 MG ? M MG . ? A MG 112 ? 1_555 O ? T HOH . ? A HOH 409 ? 1_555 84.3 ? 9 O ? T HOH . ? A HOH 406 ? 1_555 MG ? M MG . ? A MG 112 ? 1_555 O ? T HOH . ? A HOH 409 ? 1_555 82.8 ? 10 O2 ? A C 52 ? A C 52 ? 1_555 MG ? M MG . ? A MG 112 ? 1_555 O ? T HOH . ? A HOH 412 ? 1_555 73.1 ? 11 O ? T HOH . ? A HOH 406 ? 1_555 MG ? M MG . ? A MG 112 ? 1_555 O ? T HOH . ? A HOH 412 ? 1_555 101.4 ? 12 O ? T HOH . ? A HOH 409 ? 1_555 MG ? M MG . ? A MG 112 ? 1_555 O ? T HOH . ? A HOH 412 ? 1_555 75.7 ? 13 O2 ? A C 52 ? A C 52 ? 1_555 MG ? M MG . ? A MG 112 ? 1_555 O ? T HOH . ? A HOH 418 ? 1_555 93.7 ? 14 O ? T HOH . ? A HOH 406 ? 1_555 MG ? M MG . ? A MG 112 ? 1_555 O ? T HOH . ? A HOH 418 ? 1_555 85.8 ? 15 O ? T HOH . ? A HOH 409 ? 1_555 MG ? M MG . ? A MG 112 ? 1_555 O ? T HOH . ? A HOH 418 ? 1_555 77.6 ? 16 O ? T HOH . ? A HOH 412 ? 1_555 MG ? M MG . ? A MG 112 ? 1_555 O ? T HOH . ? A HOH 418 ? 1_555 151.2 ? 17 O ? T HOH . ? A HOH 415 ? 1_555 MG ? H MG . ? A MG 107 ? 1_555 O ? T HOH . ? A HOH 416 ? 1_555 78.7 ? 18 O ? T HOH . ? A HOH 415 ? 1_555 MG ? H MG . ? A MG 107 ? 1_555 O ? T HOH . ? A HOH 417 ? 1_555 55.3 ? 19 O ? T HOH . ? A HOH 416 ? 1_555 MG ? H MG . ? A MG 107 ? 1_555 O ? T HOH . ? A HOH 417 ? 1_555 69.7 ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A AMZ 101 ? 12 'binding site for residue AMZ A 101' AC2 Software A MG 102 ? 5 'binding site for residue MG A 102' AC3 Software A MG 104 ? 2 'binding site for residue MG A 104' AC4 Software A MG 105 ? 2 'binding site for residue MG A 105' AC5 Software A MG 106 ? 1 'binding site for residue MG A 106' AC6 Software A MG 107 ? 3 'binding site for residue MG A 107' AC7 Software A MG 108 ? 2 'binding site for residue MG A 108' AC8 Software A MG 109 ? 2 'binding site for residue MG A 109' AC9 Software A MG 111 ? 3 'binding site for residue MG A 111' AD1 Software A MG 112 ? 5 'binding site for residue MG A 112' AD2 Software A MG 113 ? 2 'binding site for residue MG A 113' AD3 Software A MG 114 ? 1 'binding site for residue MG A 114' AD4 Software A IRI 115 ? 4 'binding site for residue IRI A 115' AD5 Software A IRI 116 ? 5 'binding site for residue IRI A 116' AD6 Software A IRI 117 ? 3 'binding site for residue IRI A 117' AD7 Software A IRI 118 ? 4 'binding site for residue IRI A 118' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 12 U A 11 ? U A 11 . ? 1_555 ? 2 AC1 12 G A 12 ? G A 12 . ? 1_555 ? 3 AC1 12 A A 28 ? A A 28 . ? 1_555 ? 4 AC1 12 C A 29 ? C A 29 . ? 1_555 ? 5 AC1 12 G A 51 ? G A 51 . ? 7_556 ? 6 AC1 12 C A 52 ? C A 52 . ? 7_556 ? 7 AC1 12 C A 57 ? C A 57 . ? 7_556 ? 8 AC1 12 U A 58 ? U A 58 . ? 7_556 ? 9 AC1 12 G A 59 ? G A 59 . ? 7_556 ? 10 AC1 12 MG C . ? MG A 102 . ? 1_555 ? 11 AC1 12 HOH T . ? HOH A 401 . ? 1_555 ? 12 AC1 12 HOH T . ? HOH A 412 . ? 7_556 ? 13 AC2 5 U A 11 ? U A 11 . ? 1_555 ? 14 AC2 5 C A 29 ? C A 29 . ? 1_555 ? 15 AC2 5 G A 59 ? G A 59 . ? 7_556 ? 16 AC2 5 AMZ B . ? AMZ A 101 . ? 1_555 ? 17 AC2 5 HOH T . ? HOH A 401 . ? 1_555 ? 18 AC3 2 G A 2 ? G A 2 . ? 1_555 ? 19 AC3 2 MG F . ? MG A 105 . ? 1_555 ? 20 AC4 2 G A 39 ? G A 39 . ? 1_555 ? 21 AC4 2 MG E . ? MG A 104 . ? 1_555 ? 22 AC5 1 C A 18 ? C A 18 . ? 1_555 ? 23 AC6 3 HOH T . ? HOH A 415 . ? 1_555 ? 24 AC6 3 HOH T . ? HOH A 416 . ? 1_555 ? 25 AC6 3 HOH T . ? HOH A 417 . ? 1_555 ? 26 AC7 2 G A 21 ? G A 21 . ? 1_555 ? 27 AC7 2 MG J . ? MG A 109 . ? 1_555 ? 28 AC8 2 G A 21 ? G A 21 . ? 1_555 ? 29 AC8 2 MG I . ? MG A 108 . ? 1_555 ? 30 AC9 3 A A 16 ? A A 16 . ? 5_655 ? 31 AC9 3 A A 19 ? A A 19 . ? 1_555 ? 32 AC9 3 G A 20 ? G A 20 . ? 1_555 ? 33 AD1 5 C A 52 ? C A 52 . ? 1_555 ? 34 AD1 5 HOH T . ? HOH A 406 . ? 1_555 ? 35 AD1 5 HOH T . ? HOH A 409 . ? 1_555 ? 36 AD1 5 HOH T . ? HOH A 412 . ? 1_555 ? 37 AD1 5 HOH T . ? HOH A 418 . ? 1_555 ? 38 AD2 2 A A 64 ? A A 64 . ? 1_555 ? 39 AD2 2 A A 64 ? A A 64 . ? 7_556 ? 40 AD3 1 U A 47 ? U A 47 . ? 1_555 ? 41 AD4 4 U A 7 ? U A 7 . ? 1_555 ? 42 AD4 4 G A 8 ? G A 8 . ? 1_555 ? 43 AD4 4 G A 37 ? G A 37 . ? 1_555 ? 44 AD4 4 HOH T . ? HOH A 428 . ? 1_555 ? 45 AD5 5 G A 48 ? G A 48 . ? 1_555 ? 46 AD5 5 C A 49 ? C A 49 . ? 1_555 ? 47 AD5 5 G A 60 ? G A 60 . ? 1_555 ? 48 AD5 5 G A 61 ? G A 61 . ? 1_555 ? 49 AD5 5 IRI R . ? IRI A 117 . ? 1_555 ? 50 AD6 3 U A 58 ? U A 58 . ? 1_555 ? 51 AD6 3 G A 59 ? G A 59 . ? 1_555 ? 52 AD6 3 IRI Q . ? IRI A 116 . ? 1_555 ? 53 AD7 4 G A 1 ? G A 1 . ? 1_655 ? 54 AD7 4 C A 10 ? C A 10 . ? 1_555 ? 55 AD7 4 C A 30 ? C A 30 . ? 1_555 ? 56 AD7 4 A A 31 ? A A 31 . ? 1_555 ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OP2 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 A _pdbx_validate_close_contact.auth_seq_id_1 16 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 421 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.18 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id MG _pdbx_struct_special_symmetry.auth_seq_id 113 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id N _pdbx_struct_special_symmetry.label_comp_id MG _pdbx_struct_special_symmetry.label_seq_id . # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 AMZ O5 O N N 38 AMZ C6 C N N 39 AMZ N2 N N N 40 AMZ C3A C Y N 41 AMZ C7A C Y N 42 AMZ N3 N N N 43 AMZ N1 N Y N 44 AMZ C5 C Y N 45 AMZ N N Y N 46 AMZ C1 C N R 47 AMZ C2 C N R 48 AMZ C3 C N S 49 AMZ O2 O N N 50 AMZ O1 O N N 51 AMZ O O N N 52 AMZ C C N R 53 AMZ C4 C N N 54 AMZ O3 O N N 55 AMZ P P N N 56 AMZ OP1 O N N 57 AMZ O4 O N N 58 AMZ OP2 O N N 59 AMZ H11 H N N 60 AMZ H12 H N N 61 AMZ H9 H N N 62 AMZ H10 H N N 63 AMZ H13 H N N 64 AMZ H2 H N N 65 AMZ H3 H N N 66 AMZ H4 H N N 67 AMZ H5 H N N 68 AMZ H1 H N N 69 AMZ H6 H N N 70 AMZ H7 H N N 71 AMZ H8 H N N 72 AMZ H15 H N N 73 AMZ H14 H N N 74 C OP3 O N N 75 C P P N N 76 C OP1 O N N 77 C OP2 O N N 78 C "O5'" O N N 79 C "C5'" C N N 80 C "C4'" C N R 81 C "O4'" O N N 82 C "C3'" C N S 83 C "O3'" O N N 84 C "C2'" C N R 85 C "O2'" O N N 86 C "C1'" C N R 87 C N1 N N N 88 C C2 C N N 89 C O2 O N N 90 C N3 N N N 91 C C4 C N N 92 C N4 N N N 93 C C5 C N N 94 C C6 C N N 95 C HOP3 H N N 96 C HOP2 H N N 97 C "H5'" H N N 98 C "H5''" H N N 99 C "H4'" H N N 100 C "H3'" H N N 101 C "HO3'" H N N 102 C "H2'" H N N 103 C "HO2'" H N N 104 C "H1'" H N N 105 C H41 H N N 106 C H42 H N N 107 C H5 H N N 108 C H6 H N N 109 G OP3 O N N 110 G P P N N 111 G OP1 O N N 112 G OP2 O N N 113 G "O5'" O N N 114 G "C5'" C N N 115 G "C4'" C N R 116 G "O4'" O N N 117 G "C3'" C N S 118 G "O3'" O N N 119 G "C2'" C N R 120 G "O2'" O N N 121 G "C1'" C N R 122 G N9 N Y N 123 G C8 C Y N 124 G N7 N Y N 125 G C5 C Y N 126 G C6 C N N 127 G O6 O N N 128 G N1 N N N 129 G C2 C N N 130 G N2 N N N 131 G N3 N N N 132 G C4 C Y N 133 G HOP3 H N N 134 G HOP2 H N N 135 G "H5'" H N N 136 G "H5''" H N N 137 G "H4'" H N N 138 G "H3'" H N N 139 G "HO3'" H N N 140 G "H2'" H N N 141 G "HO2'" H N N 142 G "H1'" H N N 143 G H8 H N N 144 G H1 H N N 145 G H21 H N N 146 G H22 H N N 147 HOH O O N N 148 HOH H1 H N N 149 HOH H2 H N N 150 IRI IR IR N N 151 IRI N1 N N N 152 IRI N2 N N N 153 IRI N3 N N N 154 IRI N4 N N N 155 IRI N5 N N N 156 IRI N6 N N N 157 IRI HN11 H N N 158 IRI HN12 H N N 159 IRI HN13 H N N 160 IRI HN21 H N N 161 IRI HN22 H N N 162 IRI HN23 H N N 163 IRI HN31 H N N 164 IRI HN32 H N N 165 IRI HN33 H N N 166 IRI HN41 H N N 167 IRI HN42 H N N 168 IRI HN43 H N N 169 IRI HN51 H N N 170 IRI HN52 H N N 171 IRI HN53 H N N 172 IRI HN61 H N N 173 IRI HN62 H N N 174 IRI HN63 H N N 175 MG MG MG N N 176 U OP3 O N N 177 U P P N N 178 U OP1 O N N 179 U OP2 O N N 180 U "O5'" O N N 181 U "C5'" C N N 182 U "C4'" C N R 183 U "O4'" O N N 184 U "C3'" C N S 185 U "O3'" O N N 186 U "C2'" C N R 187 U "O2'" O N N 188 U "C1'" C N R 189 U N1 N N N 190 U C2 C N N 191 U O2 O N N 192 U N3 N N N 193 U C4 C N N 194 U O4 O N N 195 U C5 C N N 196 U C6 C N N 197 U HOP3 H N N 198 U HOP2 H N N 199 U "H5'" H N N 200 U "H5''" H N N 201 U "H4'" H N N 202 U "H3'" H N N 203 U "HO3'" H N N 204 U "H2'" H N N 205 U "HO2'" H N N 206 U "H1'" H N N 207 U H3 H N N 208 U H5 H N N 209 U H6 H N N 210 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 AMZ O5 C6 doub N N 40 AMZ C6 N2 sing N N 41 AMZ C6 C3A sing N N 42 AMZ N2 H11 sing N N 43 AMZ N2 H12 sing N N 44 AMZ C3A C7A doub Y N 45 AMZ C3A N1 sing Y N 46 AMZ C7A N3 sing N N 47 AMZ C7A N sing Y N 48 AMZ N3 H9 sing N N 49 AMZ N3 H10 sing N N 50 AMZ N1 C5 doub Y N 51 AMZ C5 N sing Y N 52 AMZ C5 H13 sing N N 53 AMZ N C1 sing N N 54 AMZ C1 C2 sing N N 55 AMZ C1 O sing N N 56 AMZ C1 H2 sing N N 57 AMZ C2 C3 sing N N 58 AMZ C2 O1 sing N N 59 AMZ C2 H3 sing N N 60 AMZ C3 O2 sing N N 61 AMZ C3 C sing N N 62 AMZ C3 H4 sing N N 63 AMZ O2 H5 sing N N 64 AMZ O1 H1 sing N N 65 AMZ O C sing N N 66 AMZ C C4 sing N N 67 AMZ C H6 sing N N 68 AMZ C4 O3 sing N N 69 AMZ C4 H7 sing N N 70 AMZ C4 H8 sing N N 71 AMZ O3 P sing N N 72 AMZ P OP1 sing N N 73 AMZ P O4 sing N N 74 AMZ P OP2 doub N N 75 AMZ OP1 H15 sing N N 76 AMZ O4 H14 sing N N 77 C OP3 P sing N N 78 C OP3 HOP3 sing N N 79 C P OP1 doub N N 80 C P OP2 sing N N 81 C P "O5'" sing N N 82 C OP2 HOP2 sing N N 83 C "O5'" "C5'" sing N N 84 C "C5'" "C4'" sing N N 85 C "C5'" "H5'" sing N N 86 C "C5'" "H5''" sing N N 87 C "C4'" "O4'" sing N N 88 C "C4'" "C3'" sing N N 89 C "C4'" "H4'" sing N N 90 C "O4'" "C1'" sing N N 91 C "C3'" "O3'" sing N N 92 C "C3'" "C2'" sing N N 93 C "C3'" "H3'" sing N N 94 C "O3'" "HO3'" sing N N 95 C "C2'" "O2'" sing N N 96 C "C2'" "C1'" sing N N 97 C "C2'" "H2'" sing N N 98 C "O2'" "HO2'" sing N N 99 C "C1'" N1 sing N N 100 C "C1'" "H1'" sing N N 101 C N1 C2 sing N N 102 C N1 C6 sing N N 103 C C2 O2 doub N N 104 C C2 N3 sing N N 105 C N3 C4 doub N N 106 C C4 N4 sing N N 107 C C4 C5 sing N N 108 C N4 H41 sing N N 109 C N4 H42 sing N N 110 C C5 C6 doub N N 111 C C5 H5 sing N N 112 C C6 H6 sing N N 113 G OP3 P sing N N 114 G OP3 HOP3 sing N N 115 G P OP1 doub N N 116 G P OP2 sing N N 117 G P "O5'" sing N N 118 G OP2 HOP2 sing N N 119 G "O5'" "C5'" sing N N 120 G "C5'" "C4'" sing N N 121 G "C5'" "H5'" sing N N 122 G "C5'" "H5''" sing N N 123 G "C4'" "O4'" sing N N 124 G "C4'" "C3'" sing N N 125 G "C4'" "H4'" sing N N 126 G "O4'" "C1'" sing N N 127 G "C3'" "O3'" sing N N 128 G "C3'" "C2'" sing N N 129 G "C3'" "H3'" sing N N 130 G "O3'" "HO3'" sing N N 131 G "C2'" "O2'" sing N N 132 G "C2'" "C1'" sing N N 133 G "C2'" "H2'" sing N N 134 G "O2'" "HO2'" sing N N 135 G "C1'" N9 sing N N 136 G "C1'" "H1'" sing N N 137 G N9 C8 sing Y N 138 G N9 C4 sing Y N 139 G C8 N7 doub Y N 140 G C8 H8 sing N N 141 G N7 C5 sing Y N 142 G C5 C6 sing N N 143 G C5 C4 doub Y N 144 G C6 O6 doub N N 145 G C6 N1 sing N N 146 G N1 C2 sing N N 147 G N1 H1 sing N N 148 G C2 N2 sing N N 149 G C2 N3 doub N N 150 G N2 H21 sing N N 151 G N2 H22 sing N N 152 G N3 C4 sing N N 153 HOH O H1 sing N N 154 HOH O H2 sing N N 155 IRI IR N1 sing N N 156 IRI IR N2 sing N N 157 IRI IR N3 sing N N 158 IRI IR N4 sing N N 159 IRI IR N5 sing N N 160 IRI IR N6 sing N N 161 IRI N1 HN11 sing N N 162 IRI N1 HN12 sing N N 163 IRI N1 HN13 sing N N 164 IRI N2 HN21 sing N N 165 IRI N2 HN22 sing N N 166 IRI N2 HN23 sing N N 167 IRI N3 HN31 sing N N 168 IRI N3 HN32 sing N N 169 IRI N3 HN33 sing N N 170 IRI N4 HN41 sing N N 171 IRI N4 HN42 sing N N 172 IRI N4 HN43 sing N N 173 IRI N5 HN51 sing N N 174 IRI N5 HN52 sing N N 175 IRI N5 HN53 sing N N 176 IRI N6 HN61 sing N N 177 IRI N6 HN62 sing N N 178 IRI N6 HN63 sing N N 179 U OP3 P sing N N 180 U OP3 HOP3 sing N N 181 U P OP1 doub N N 182 U P OP2 sing N N 183 U P "O5'" sing N N 184 U OP2 HOP2 sing N N 185 U "O5'" "C5'" sing N N 186 U "C5'" "C4'" sing N N 187 U "C5'" "H5'" sing N N 188 U "C5'" "H5''" sing N N 189 U "C4'" "O4'" sing N N 190 U "C4'" "C3'" sing N N 191 U "C4'" "H4'" sing N N 192 U "O4'" "C1'" sing N N 193 U "C3'" "O3'" sing N N 194 U "C3'" "C2'" sing N N 195 U "C3'" "H3'" sing N N 196 U "O3'" "HO3'" sing N N 197 U "C2'" "O2'" sing N N 198 U "C2'" "C1'" sing N N 199 U "C2'" "H2'" sing N N 200 U "O2'" "HO2'" sing N N 201 U "C1'" N1 sing N N 202 U "C1'" "H1'" sing N N 203 U N1 C2 sing N N 204 U N1 C6 sing N N 205 U C2 O2 doub N N 206 U C2 N3 sing N N 207 U N3 C4 sing N N 208 U N3 H3 sing N N 209 U C4 O4 doub N N 210 U C4 C5 sing N N 211 U C5 C6 doub N N 212 U C5 H5 sing N N 213 U C6 H6 sing N N 214 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature _ndb_struct_conf_na.feature_count 4XW7 'double helix' ? 4XW7 'a-form double helix' ? 4XW7 'hairpin loop' ? 4XW7 'bulge loop' ? 4XW7 'mismatched base pair' ? # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A G 12 1_555 A A 28 1_555 -1.926 6.738 -1.865 -29.332 4.601 145.580 1 A_G12:A28_A A 12 ? A 28 ? ? 11 1 A C 29 1_555 A G 24 1_555 0.376 -0.483 -0.168 10.089 -23.449 0.870 2 A_C29:G24_A A 29 ? A 24 ? 19 1 1 A C 30 1_555 A G 23 1_555 -0.075 0.038 0.106 -4.280 -8.371 4.908 3 A_C30:G23_A A 30 ? A 23 ? 19 1 1 A A 31 1_555 A U 22 1_555 0.224 -0.157 0.109 2.015 -4.517 -2.200 4 A_A31:U22_A A 31 ? A 22 ? 20 1 1 A C 32 1_555 A G 21 1_555 -0.017 -0.125 -0.111 8.821 -8.132 2.996 5 A_C32:G21_A A 32 ? A 21 ? 19 1 1 A C 33 1_555 A G 20 1_555 0.703 -0.180 -0.727 16.183 -6.740 0.035 6 A_C33:G20_A A 33 ? A 20 ? 19 1 1 A G 34 1_555 A A 19 1_555 -2.431 -6.819 2.117 -55.820 4.331 -153.403 7 A_G34:A19_A A 34 ? A 19 ? ? 6 1 A G 35 1_555 A U 11 1_555 -2.268 -0.465 -0.531 -29.218 -15.544 9.667 8 A_G35:U11_A A 35 ? A 11 ? 28 1 1 A G 36 1_555 A C 10 1_555 -0.151 -0.175 0.248 -10.312 -7.717 -0.029 9 A_G36:C10_A A 36 ? A 10 ? 19 1 1 A G 37 1_555 A A 9 1_555 6.522 -4.324 -0.035 2.052 -10.602 -9.175 10 A_G37:A9_A A 37 ? A 9 ? 11 10 1 A A 38 1_555 A G 8 1_555 -7.016 -4.592 -0.271 8.611 -7.326 -9.792 11 A_A38:G8_A A 38 ? A 8 ? 11 10 1 A G 39 1_555 A U 7 1_555 -2.156 -0.496 0.240 7.710 -13.833 0.691 12 A_G39:U7_A A 39 ? A 7 ? 28 1 1 A C 40 1_555 A G 6 1_555 -0.041 -0.192 -0.003 6.570 -18.510 0.748 13 A_C40:G6_A A 40 ? A 6 ? 19 1 1 A G 41 1_555 A C 5 1_555 -0.082 -0.207 0.237 1.366 -8.981 2.197 14 A_G41:C5_A A 41 ? A 5 ? 19 1 1 A A 42 1_555 A U 4 1_555 -0.071 -0.187 0.010 8.588 -8.813 0.493 15 A_A42:U4_A A 42 ? A 4 ? 20 1 1 A C 43 1_555 A G 3 1_555 0.446 -0.248 -0.267 9.828 -12.415 2.454 16 A_C43:G3_A A 43 ? A 3 ? 19 1 1 A C 44 1_555 A G 2 1_555 0.083 -0.335 -0.327 7.890 -7.943 -0.007 17 A_C44:G2_A A 44 ? A 2 ? 19 1 1 A C 45 1_555 A G 1 1_555 0.142 -0.254 -0.051 1.043 -10.805 5.276 18 A_C45:G1_A A 45 ? A 1 ? 19 1 1 A U 46 1_555 A A 64 1_555 -0.447 -0.310 0.191 -11.448 -12.250 0.613 19 A_U46:A64_A A 46 ? A 64 ? 20 1 1 A U 47 1_555 A A 63 1_555 0.663 0.064 0.317 -0.220 -5.142 1.236 20 A_U47:A63_A A 47 ? A 63 ? 20 1 1 A G 48 1_555 A C 62 1_555 -0.242 -0.242 0.315 5.628 -11.363 -1.033 21 A_G48:C62_A A 48 ? A 62 ? 19 1 1 A C 49 1_555 A G 61 1_555 -0.210 -0.245 -0.197 7.479 -8.714 -3.318 22 A_C49:G61_A A 49 ? A 61 ? 19 1 1 A C 50 1_555 A G 60 1_555 -0.076 -0.244 0.070 7.214 11.314 -1.193 23 A_C50:G60_A A 50 ? A 60 ? 19 1 1 A G 51 1_555 A G 59 1_555 -2.270 -2.367 1.211 2.572 -50.577 117.603 24 A_G51:G59_A A 51 ? A 59 ? ? 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A C 29 1_555 A G 24 1_555 A C 30 1_555 A G 23 1_555 -0.539 -2.187 3.514 -4.819 11.793 30.267 -5.839 0.153 2.560 21.432 8.757 32.781 1 AA_C29C30:G23G24_AA A 29 ? A 24 ? A 30 ? A 23 ? 1 A C 30 1_555 A G 23 1_555 A A 31 1_555 A U 22 1_555 -0.679 -1.388 2.923 -0.736 11.909 30.948 -4.084 1.089 2.264 21.348 1.319 33.116 2 AA_C30A31:U22G23_AA A 30 ? A 23 ? A 31 ? A 22 ? 1 A A 31 1_555 A U 22 1_555 A C 32 1_555 A G 21 1_555 0.218 -1.279 3.091 1.755 10.436 28.501 -4.290 -0.105 2.487 20.332 -3.420 30.365 3 AA_A31C32:G21U22_AA A 31 ? A 22 ? A 32 ? A 21 ? 1 A C 32 1_555 A G 21 1_555 A C 33 1_555 A G 20 1_555 0.292 -1.471 3.103 2.727 4.042 34.641 -3.014 -0.105 2.932 6.747 -4.552 34.972 4 AA_C32C33:G20G21_AA A 32 ? A 21 ? A 33 ? A 20 ? 1 A C 33 1_555 A G 20 1_555 A G 34 1_555 A A 19 1_555 -3.275 1.100 3.836 18.744 31.627 111.315 0.248 2.178 3.598 18.860 -11.177 115.264 5 AA_C33G34:A19G20_AA A 33 ? A 20 ? A 34 ? A 19 ? 1 A G 34 1_555 A A 19 1_555 A G 35 1_555 A U 11 1_555 1.544 -4.742 4.897 -3.249 -7.847 -36.132 8.895 1.832 3.936 12.441 -5.152 -37.084 6 AA_G34G35:U11A19_AA A 34 ? A 19 ? A 35 ? A 11 ? 1 A G 35 1_555 A U 11 1_555 A G 36 1_555 A C 10 1_555 -1.389 -2.328 2.906 -5.889 1.151 23.178 -5.960 1.581 3.043 2.805 14.351 23.932 7 AA_G35G36:C10U11_AA A 35 ? A 11 ? A 36 ? A 10 ? 1 A G 36 1_555 A C 10 1_555 A G 37 1_555 A A 9 1_555 -1.118 -0.624 3.159 0.948 1.014 62.793 -0.643 1.114 3.135 0.973 -0.910 62.807 8 AA_G36G37:A9C10_AA A 36 ? A 10 ? A 37 ? A 9 ? 1 A G 37 1_555 A A 9 1_555 A A 38 1_555 A G 8 1_555 -0.073 -0.684 3.317 2.480 3.856 -28.101 0.483 0.435 3.372 -7.875 5.065 -28.465 9 AA_G37A38:G8A9_AA A 37 ? A 9 ? A 38 ? A 8 ? 1 A A 38 1_555 A G 8 1_555 A G 39 1_555 A U 7 1_555 0.985 -0.988 3.459 -4.253 -0.100 57.242 -1.023 -1.268 3.386 -0.104 4.432 57.386 10 AA_A38G39:U7G8_AA A 38 ? A 8 ? A 39 ? A 7 ? 1 A G 39 1_555 A U 7 1_555 A C 40 1_555 A G 6 1_555 -0.158 -1.201 3.209 -0.524 1.025 43.022 -1.736 0.164 3.183 1.398 0.714 43.036 11 AA_G39C40:G6U7_AA A 39 ? A 7 ? A 40 ? A 6 ? 1 A C 40 1_555 A G 6 1_555 A G 41 1_555 A C 5 1_555 -0.426 -2.025 3.297 -4.500 10.599 29.255 -5.562 0.014 2.468 20.033 8.505 31.393 12 AA_C40G41:C5G6_AA A 40 ? A 6 ? A 41 ? A 5 ? 1 A G 41 1_555 A C 5 1_555 A A 42 1_555 A U 4 1_555 -0.455 -1.196 3.067 -0.573 8.615 31.455 -3.470 0.722 2.662 15.528 1.032 32.589 13 AA_G41A42:U4C5_AA A 41 ? A 5 ? A 42 ? A 4 ? 1 A A 42 1_555 A U 4 1_555 A C 43 1_555 A G 3 1_555 0.203 -1.258 3.241 2.433 9.502 32.947 -3.532 0.015 2.789 16.309 -4.176 34.337 14 AA_A42C43:G3U4_AA A 42 ? A 4 ? A 43 ? A 3 ? 1 A C 43 1_555 A G 3 1_555 A C 44 1_555 A G 2 1_555 -0.346 -2.044 3.292 -1.247 12.068 29.212 -5.750 0.429 2.300 22.731 2.350 31.580 15 AA_C43C44:G2G3_AA A 43 ? A 3 ? A 44 ? A 2 ? 1 A C 44 1_555 A G 2 1_555 A C 45 1_555 A G 1 1_555 0.406 -1.546 3.321 0.237 7.338 31.501 -4.029 -0.688 2.899 13.291 -0.430 32.324 16 AA_C44C45:G1G2_AA A 44 ? A 2 ? A 45 ? A 1 ? 1 A C 45 1_555 A G 1 1_555 A U 46 1_555 A A 64 1_555 1.773 -1.094 3.361 3.649 10.655 43.514 -2.411 -1.987 3.154 14.093 -4.826 44.879 17 AA_C45U46:A64G1_AA A 45 ? A 1 ? A 46 ? A 64 ? 1 A U 46 1_555 A A 64 1_555 A U 47 1_555 A A 63 1_555 0.406 -1.609 2.961 0.338 3.465 33.314 -3.296 -0.656 2.788 6.024 -0.588 33.490 18 AA_U46U47:A63A64_AA A 46 ? A 64 ? A 47 ? A 63 ? 1 A U 47 1_555 A A 63 1_555 A G 48 1_555 A C 62 1_555 0.126 -1.957 2.999 0.131 3.072 25.026 -5.275 -0.256 2.744 7.056 -0.301 25.211 19 AA_U47G48:C62A63_AA A 47 ? A 63 ? A 48 ? A 62 ? 1 A G 48 1_555 A C 62 1_555 A C 49 1_555 A G 61 1_555 -0.452 -1.950 3.155 0.275 -1.520 33.870 -3.105 0.817 3.233 -2.607 -0.472 33.905 20 AA_G48C49:G61C62_AA A 48 ? A 62 ? A 49 ? A 61 ? 1 A C 49 1_555 A G 61 1_555 A C 50 1_555 A G 60 1_555 -0.235 -2.131 3.371 -2.211 10.240 30.820 -5.476 0.059 2.561 18.605 4.017 32.511 21 AA_C49C50:G60G61_AA A 49 ? A 61 ? A 50 ? A 60 ? 1 A C 50 1_555 A G 60 1_555 A G 51 1_555 A G 59 1_555 -1.367 -2.799 -0.109 -162.175 50.970 107.968 -1.405 0.672 0.185 25.771 81.996 174.123 22 AA_C50G51:G59G60_AA A 50 ? A 60 ? A 51 ? A 59 ? # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number GM073850 _pdbx_audit_support.ordinal 1 # _atom_sites.entry_id 4XW7 _atom_sites.fract_transf_matrix[1][1] 0.024900 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.024900 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.004257 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C IR MG N O P # loop_