HEADER HYDROLASE 29-JAN-15 4XWM TITLE COMPLEX STRUCTURE OF CATALYTIC DOMAIN OF CLOSTRIDIUM CELLULOVORANS TITLE 2 EXGS AND CELLOBIOSE COMPND MOL_ID: 1; COMPND 2 MOLECULE: EXOGLUCANASE S; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: CATALYTIC DOMAIN, UNP RESIDUES 32-674; COMPND 5 EC: 3.2.1.91; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CLOSTRIDIUM CELLULOVORANS; SOURCE 3 ORGANISM_TAXID: 1493; SOURCE 4 GENE: EXGS; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: JM109; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PHTPP13 KEYWDS HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.-C.LIAW REVDAT 3 08-NOV-23 4XWM 1 HETSYN REVDAT 2 29-JUL-20 4XWM 1 COMPND REMARK HET HETNAM REVDAT 2 2 1 HETSYN FORMUL LINK SITE REVDAT 2 3 1 ATOM REVDAT 1 28-OCT-15 4XWM 0 SPRSDE 28-OCT-15 4XWM 4KKF JRNL AUTH L.-C.TSAI,I.AMIRASLANOV,H.R.CHEN,Y.W.CHEN,H.L.LEE,P.H.LIANG, JRNL AUTH 2 Y.-C.LIAW JRNL TITL STRUCTURES OF EXOGLUCANASE FROM CLOSTRIDIUM CELLULOVORANS: JRNL TITL 2 CELLOTETRAOSE BINDING AND CLEAVAGE JRNL REF ACTA CRYSTALLOGR.,SECT.F V. 71 1264 2015 JRNL REFN ESSN 2053-230X JRNL PMID 26457517 JRNL DOI 10.1107/S2053230X15015915 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.9_1692) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 27.51 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 119727 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.146 REMARK 3 R VALUE (WORKING SET) : 0.146 REMARK 3 FREE R VALUE : 0.163 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 1.670 REMARK 3 FREE R VALUE TEST SET COUNT : 2000 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 27.5091 - 4.1001 0.97 8686 148 0.1480 0.1525 REMARK 3 2 4.1001 - 3.2560 0.99 8494 144 0.1359 0.1433 REMARK 3 3 3.2560 - 2.8449 0.99 8451 143 0.1552 0.1767 REMARK 3 4 2.8449 - 2.5850 1.00 8468 144 0.1555 0.1782 REMARK 3 5 2.5850 - 2.3999 1.00 8443 144 0.1535 0.1717 REMARK 3 6 2.3999 - 2.2584 1.00 8373 142 0.1433 0.1789 REMARK 3 7 2.2584 - 2.1454 1.00 8396 143 0.1416 0.1600 REMARK 3 8 2.1454 - 2.0520 1.00 8406 142 0.1368 0.1618 REMARK 3 9 2.0520 - 1.9731 1.00 8367 143 0.1369 0.1556 REMARK 3 10 1.9731 - 1.9050 1.00 8343 141 0.1399 0.1515 REMARK 3 11 1.9050 - 1.8454 1.00 8337 142 0.1397 0.1649 REMARK 3 12 1.8454 - 1.7927 1.00 8335 141 0.1507 0.1618 REMARK 3 13 1.7927 - 1.7455 1.00 8371 143 0.1510 0.1935 REMARK 3 14 1.7455 - 1.7029 0.99 8257 140 0.1530 0.1703 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.120 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 13.920 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 11.76 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 14.47 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 5431 REMARK 3 ANGLE : 1.186 7461 REMARK 3 CHIRALITY : 0.058 772 REMARK 3 PLANARITY : 0.007 959 REMARK 3 DIHEDRAL : 14.454 1967 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 2 THROUGH 45 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.0808 25.9649 -31.2075 REMARK 3 T TENSOR REMARK 3 T11: 0.0532 T22: 0.0973 REMARK 3 T33: 0.0794 T12: -0.0174 REMARK 3 T13: 0.0098 T23: 0.0175 REMARK 3 L TENSOR REMARK 3 L11: 1.2806 L22: 0.6267 REMARK 3 L33: 1.6025 L12: 0.2201 REMARK 3 L13: 0.8105 L23: 0.6937 REMARK 3 S TENSOR REMARK 3 S11: -0.0143 S12: 0.0906 S13: 0.0115 REMARK 3 S21: -0.0760 S22: 0.0463 S23: -0.0797 REMARK 3 S31: -0.1099 S32: 0.1849 S33: -0.0331 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 46 THROUGH 82 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.9428 14.9444 -28.6382 REMARK 3 T TENSOR REMARK 3 T11: 0.0277 T22: 0.0964 REMARK 3 T33: 0.0871 T12: 0.0081 REMARK 3 T13: -0.0090 T23: 0.0016 REMARK 3 L TENSOR REMARK 3 L11: 0.7499 L22: 1.0348 REMARK 3 L33: 2.2087 L12: 0.4900 REMARK 3 L13: 0.4811 L23: 0.6408 REMARK 3 S TENSOR REMARK 3 S11: 0.0317 S12: 0.0464 S13: -0.0686 REMARK 3 S21: -0.0370 S22: 0.0245 S23: -0.1061 REMARK 3 S31: 0.1059 S32: 0.1201 S33: -0.0491 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 83 THROUGH 220 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.8173 23.1142 -6.3492 REMARK 3 T TENSOR REMARK 3 T11: 0.0678 T22: 0.1100 REMARK 3 T33: 0.0607 T12: 0.0085 REMARK 3 T13: -0.0140 T23: 0.0099 REMARK 3 L TENSOR REMARK 3 L11: 0.7746 L22: 0.5867 REMARK 3 L33: 0.4156 L12: 0.1980 REMARK 3 L13: 0.1106 L23: 0.1338 REMARK 3 S TENSOR REMARK 3 S11: -0.0081 S12: -0.1193 S13: 0.0436 REMARK 3 S21: 0.0646 S22: 0.0262 S23: 0.0083 REMARK 3 S31: 0.0218 S32: -0.0054 S33: -0.0191 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 221 THROUGH 440 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.1592 20.5100 -24.7070 REMARK 3 T TENSOR REMARK 3 T11: 0.0413 T22: 0.0640 REMARK 3 T33: 0.0603 T12: -0.0062 REMARK 3 T13: -0.0123 T23: 0.0008 REMARK 3 L TENSOR REMARK 3 L11: 0.5343 L22: 0.3357 REMARK 3 L33: 0.5716 L12: -0.1193 REMARK 3 L13: 0.1088 L23: -0.1026 REMARK 3 S TENSOR REMARK 3 S11: -0.0024 S12: -0.0108 S13: -0.0227 REMARK 3 S21: -0.0027 S22: -0.0009 S23: 0.0169 REMARK 3 S31: -0.0105 S32: -0.0241 S33: 0.0017 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 441 THROUGH 485 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.7702 38.1032 -36.2506 REMARK 3 T TENSOR REMARK 3 T11: 0.0959 T22: 0.0819 REMARK 3 T33: 0.1051 T12: 0.0023 REMARK 3 T13: -0.0237 T23: 0.0262 REMARK 3 L TENSOR REMARK 3 L11: 4.4704 L22: 0.3831 REMARK 3 L33: 1.8540 L12: 0.1144 REMARK 3 L13: -1.9448 L23: -0.0563 REMARK 3 S TENSOR REMARK 3 S11: 0.1878 S12: 0.0525 S13: 0.3675 REMARK 3 S21: -0.0583 S22: -0.0011 S23: 0.0217 REMARK 3 S31: -0.2292 S32: -0.0456 S33: -0.1560 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 486 THROUGH 627 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.3367 34.5068 -30.4035 REMARK 3 T TENSOR REMARK 3 T11: 0.0817 T22: 0.0739 REMARK 3 T33: 0.1002 T12: -0.0018 REMARK 3 T13: -0.0021 T23: 0.0112 REMARK 3 L TENSOR REMARK 3 L11: 0.4678 L22: 0.2252 REMARK 3 L33: 1.3240 L12: 0.1510 REMARK 3 L13: 0.5576 L23: 0.2996 REMARK 3 S TENSOR REMARK 3 S11: -0.0684 S12: 0.0455 S13: 0.1144 REMARK 3 S21: -0.0492 S22: 0.0136 S23: 0.0063 REMARK 3 S31: -0.2019 S32: 0.0902 S33: 0.0659 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: TLS REMARK 4 REMARK 4 4XWM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 04-FEB-15. REMARK 100 THE DEPOSITION ID IS D_1000206279. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-APR-09; 09-FEB-09 REMARK 200 TEMPERATURE (KELVIN) : 100.0; 100.0 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : NSRRC; NSRRC REMARK 200 BEAMLINE : BL13B1; BL13C1 REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0; 1.0 REMARK 200 MONOCHROMATOR : LN2-COOLED DOUBLE CRYSTAL; REMARK 200 SINGLE CRYSTAL SI(111) BENT REMARK 200 MONOCHROMOTOR REMARK 200 OPTICS : MONOCHROMATOR; MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD; CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315; ADSC QUANTUM REMARK 200 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 119873 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 6.600 REMARK 200 R MERGE (I) : 0.05100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.76 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 6.60 REMARK 200 R MERGE FOR SHELL (I) : 0.26500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.5.3, RESOLVE 2.15 REMARK 200 STARTING MODEL: PDB ENTRY 1F9O REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 67.80 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.80 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG3350, SODIUM TARTRATE, PH 7.5, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 91.07250 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 54.57000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 54.57000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 45.53625 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 54.57000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 54.57000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 136.60875 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 54.57000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 54.57000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 45.53625 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 54.57000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 54.57000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 136.60875 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 91.07250 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: BIOLOGICAL UNIT IS THE SAME AS ASYM. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1310 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21260 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 3.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 919 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 922 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 949 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -43 REMARK 465 GLY A -42 REMARK 465 SER A -41 REMARK 465 SER A -40 REMARK 465 HIS A -39 REMARK 465 HIS A -38 REMARK 465 HIS A -37 REMARK 465 HIS A -36 REMARK 465 HIS A -35 REMARK 465 HIS A -34 REMARK 465 SER A -33 REMARK 465 SER A -32 REMARK 465 GLY A -31 REMARK 465 LEU A -30 REMARK 465 VAL A -29 REMARK 465 PRO A -28 REMARK 465 ARG A -27 REMARK 465 GLY A -26 REMARK 465 SER A -25 REMARK 465 HIS A -24 REMARK 465 MET A -23 REMARK 465 ALA A -22 REMARK 465 SER A -21 REMARK 465 MET A -20 REMARK 465 THR A -19 REMARK 465 GLY A -18 REMARK 465 GLY A -17 REMARK 465 GLN A -16 REMARK 465 GLN A -15 REMARK 465 MET A -14 REMARK 465 GLY A -13 REMARK 465 ARG A -12 REMARK 465 ILE A -11 REMARK 465 GLU A -10 REMARK 465 GLY A -9 REMARK 465 ARG A -8 REMARK 465 GLU A -7 REMARK 465 PHE A -6 REMARK 465 ALA A -5 REMARK 465 ALA A -4 REMARK 465 PRO A -3 REMARK 465 VAL A -2 REMARK 465 ASP A 629 REMARK 465 PRO A 630 REMARK 465 THR A 631 REMARK 465 PRO A 632 REMARK 465 GLY A 633 REMARK 465 LEU A 634 REMARK 465 LYS A 635 REMARK 465 GLY A 636 REMARK 465 ASP A 637 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 102 CD CE NZ REMARK 470 LYS A 194 CD CE NZ REMARK 470 LYS A 216 CG CD CE NZ REMARK 470 LYS A 478 CG CD CE NZ REMARK 470 GLU A 520 CD OE1 OE2 REMARK 470 LYS A 549 CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 39 -36.71 -163.02 REMARK 500 ALA A 40 -60.48 -143.85 REMARK 500 THR A 172 -77.31 -128.61 REMARK 500 GLN A 174 -21.02 -147.62 REMARK 500 GLN A 174 -20.34 -148.01 REMARK 500 ASN A 273 53.63 -147.79 REMARK 500 ASN A 317 82.56 -154.34 REMARK 500 VAL A 394 -51.85 71.95 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 HIS A 45 GLU A 46 149.95 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ASN A 599 0.08 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 706 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 26 OE1 REMARK 620 2 GLU A 26 OE2 52.5 REMARK 620 3 VAL A 153 O 102.5 114.6 REMARK 620 4 ASP A 154 OD1 106.4 152.5 85.0 REMARK 620 5 THR A 165 O 148.0 95.7 85.8 105.2 REMARK 620 6 HOH A 901 O 97.6 83.9 158.5 81.9 81.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 705 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLN A 178 O REMARK 620 2 GLN A 178 OE1 86.4 REMARK 620 3 GLU A 183 OE1 86.6 142.4 REMARK 620 4 GLU A 183 OE2 82.3 165.9 45.4 REMARK 620 5 ASP A 397 OD2 116.6 97.0 119.0 80.6 REMARK 620 6 HOH A1276 O 81.7 89.6 52.9 97.1 160.8 REMARK 620 7 HOH A1386 O 150.7 103.8 68.5 90.1 89.7 71.2 REMARK 620 N 1 2 3 4 5 6 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4XWL RELATED DB: PDB REMARK 900 RELATED ID: 4XWN RELATED DB: PDB DBREF 4XWM A -5 637 UNP O65986 O65986_CLOCL 32 674 SEQADV 4XWM MET A -43 UNP O65986 EXPRESSION TAG SEQADV 4XWM GLY A -42 UNP O65986 EXPRESSION TAG SEQADV 4XWM SER A -41 UNP O65986 EXPRESSION TAG SEQADV 4XWM SER A -40 UNP O65986 EXPRESSION TAG SEQADV 4XWM HIS A -39 UNP O65986 EXPRESSION TAG SEQADV 4XWM HIS A -38 UNP O65986 EXPRESSION TAG SEQADV 4XWM HIS A -37 UNP O65986 EXPRESSION TAG SEQADV 4XWM HIS A -36 UNP O65986 EXPRESSION TAG SEQADV 4XWM HIS A -35 UNP O65986 EXPRESSION TAG SEQADV 4XWM HIS A -34 UNP O65986 EXPRESSION TAG SEQADV 4XWM SER A -33 UNP O65986 EXPRESSION TAG SEQADV 4XWM SER A -32 UNP O65986 EXPRESSION TAG SEQADV 4XWM GLY A -31 UNP O65986 EXPRESSION TAG SEQADV 4XWM LEU A -30 UNP O65986 EXPRESSION TAG SEQADV 4XWM VAL A -29 UNP O65986 EXPRESSION TAG SEQADV 4XWM PRO A -28 UNP O65986 EXPRESSION TAG SEQADV 4XWM ARG A -27 UNP O65986 EXPRESSION TAG SEQADV 4XWM GLY A -26 UNP O65986 EXPRESSION TAG SEQADV 4XWM SER A -25 UNP O65986 EXPRESSION TAG SEQADV 4XWM HIS A -24 UNP O65986 EXPRESSION TAG SEQADV 4XWM MET A -23 UNP O65986 EXPRESSION TAG SEQADV 4XWM ALA A -22 UNP O65986 EXPRESSION TAG SEQADV 4XWM SER A -21 UNP O65986 EXPRESSION TAG SEQADV 4XWM MET A -20 UNP O65986 EXPRESSION TAG SEQADV 4XWM THR A -19 UNP O65986 EXPRESSION TAG SEQADV 4XWM GLY A -18 UNP O65986 EXPRESSION TAG SEQADV 4XWM GLY A -17 UNP O65986 EXPRESSION TAG SEQADV 4XWM GLN A -16 UNP O65986 EXPRESSION TAG SEQADV 4XWM GLN A -15 UNP O65986 EXPRESSION TAG SEQADV 4XWM MET A -14 UNP O65986 EXPRESSION TAG SEQADV 4XWM GLY A -13 UNP O65986 EXPRESSION TAG SEQADV 4XWM ARG A -12 UNP O65986 EXPRESSION TAG SEQADV 4XWM ILE A -11 UNP O65986 EXPRESSION TAG SEQADV 4XWM GLU A -10 UNP O65986 EXPRESSION TAG SEQADV 4XWM GLY A -9 UNP O65986 EXPRESSION TAG SEQADV 4XWM ARG A -8 UNP O65986 EXPRESSION TAG SEQADV 4XWM GLU A -7 UNP O65986 EXPRESSION TAG SEQADV 4XWM PHE A -6 UNP O65986 EXPRESSION TAG SEQRES 1 A 681 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 681 LEU VAL PRO ARG GLY SER HIS MET ALA SER MET THR GLY SEQRES 3 A 681 GLY GLN GLN MET GLY ARG ILE GLU GLY ARG GLU PHE ALA SEQRES 4 A 681 ALA PRO VAL VAL PRO ASN ASN GLU TYR VAL GLN HIS PHE SEQRES 5 A 681 LYS ASP MET TYR ALA LYS ILE HIS ASN ALA ASN ASN GLY SEQRES 6 A 681 TYR PHE SER ASP GLU GLY ILE PRO TYR HIS ALA VAL GLU SEQRES 7 A 681 THR LEU MET VAL GLU ALA PRO ASP TYR GLY HIS GLU THR SEQRES 8 A 681 THR SER GLU ALA PHE SER TYR TYR MET TRP LEU GLU ALA SEQRES 9 A 681 MET ASN ALA LYS LEU THR GLY ASP PHE SER GLY PHE LYS SEQRES 10 A 681 LYS ALA TRP ASP VAL THR GLU LYS TYR ILE ILE PRO GLY SEQRES 11 A 681 GLU THR ASP GLN PRO SER ALA SER MET SER ASN TYR ASP SEQRES 12 A 681 PRO ASN LYS PRO ALA THR TYR ALA ALA GLU HIS PRO ASP SEQRES 13 A 681 PRO SER MET TYR PRO SER GLN LEU GLN PHE GLY ALA ALA SEQRES 14 A 681 VAL GLY LYS ASP PRO LEU TYR ASN GLU LEU LYS SER THR SEQRES 15 A 681 TYR GLY THR SER GLN VAL TYR GLY MET HIS TRP LEU LEU SEQRES 16 A 681 ASP VAL ASP ASN TRP TYR GLY PHE GLY GLY ALA THR SER SEQRES 17 A 681 THR SER PRO VAL TYR ILE ASN THR PHE GLN ARG GLY VAL SEQRES 18 A 681 GLN GLU SER CYS TRP GLU THR VAL PRO GLN PRO CYS LYS SEQRES 19 A 681 ASP GLU MET LYS TYR GLY GLY ARG ASN GLY PHE LEU ASP SEQRES 20 A 681 LEU PHE THR GLY ASP SER GLN TYR ALA THR GLN PHE LYS SEQRES 21 A 681 TYR THR ASN ALA PRO ASP ALA ASP ALA ARG ALA VAL GLN SEQRES 22 A 681 ALA THR TYR TYR ALA GLN LEU ALA ALA LYS GLU TRP GLY SEQRES 23 A 681 VAL ASP ILE SER SER TYR VAL ALA LYS SER THR LYS MET SEQRES 24 A 681 GLY ASP PHE LEU ARG TYR SER PHE PHE ASP LYS TYR PHE SEQRES 25 A 681 ARG LYS VAL GLY ASN SER THR GLN ALA GLY THR GLY TYR SEQRES 26 A 681 ASP SER ALA GLN TYR LEU LEU ASN TRP TYR TYR ALA TRP SEQRES 27 A 681 GLY GLY GLY ILE SER SER ASN TRP SER TRP ARG ILE GLY SEQRES 28 A 681 SER SER HIS ASN HIS PHE GLY TYR GLN ASN PRO MET ALA SEQRES 29 A 681 ALA TRP ILE LEU SER ASN THR SER ASP PHE LYS PRO LYS SEQRES 30 A 681 SER PRO ASN ALA ALA THR ASP TRP ASN ASN SER LEU LYS SEQRES 31 A 681 ARG GLN ILE GLU PHE TYR GLN TRP LEU GLN SER ALA GLU SEQRES 32 A 681 GLY GLY ILE ALA GLY GLY ALA SER ASN SER ASN GLY GLY SEQRES 33 A 681 SER TYR GLN ALA TRP PRO ALA GLY THR ARG THR PHE TYR SEQRES 34 A 681 GLY MET GLY TYR THR PRO HIS PRO VAL TYR GLU ASP PRO SEQRES 35 A 681 GLY SER ASN GLU TRP PHE GLY MET GLN ALA TRP SER MET SEQRES 36 A 681 GLN ARG VAL ALA GLU TYR TYR TYR SER SER LYS ASP PRO SEQRES 37 A 681 ALA ALA LYS SER LEU LEU ASP LYS TRP ALA LYS TRP ALA SEQRES 38 A 681 CYS ALA ASN VAL GLN PHE ASP ASP ALA ALA LYS LYS PHE SEQRES 39 A 681 LYS ILE PRO ALA LYS LEU VAL TRP THR GLY GLN PRO ASP SEQRES 40 A 681 THR TRP THR GLY SER TYR THR GLY ASN SER ASN LEU HIS SEQRES 41 A 681 VAL LYS VAL GLU ALA TYR GLY GLU ASP LEU GLY VAL ALA SEQRES 42 A 681 GLY SER LEU SER ASN ALA LEU SER TYR TYR ALA LYS ALA SEQRES 43 A 681 LEU GLU SER SER THR ASP ALA ALA ASP LYS VAL ALA TYR SEQRES 44 A 681 ASN THR ALA LYS GLU THR SER ARG LYS ILE LEU ASP TYR SEQRES 45 A 681 LEU TRP ALA SER TYR GLN ASP ASP LYS GLY ILE ALA VAL SEQRES 46 A 681 THR GLU THR ARG ASN ASP PHE LYS ARG PHE ASN GLN SER SEQRES 47 A 681 VAL TYR ILE PRO SER GLY TRP THR GLY LYS MET PRO ASN SEQRES 48 A 681 GLY ASP VAL ILE GLN SER GLY ALA THR PHE LEU SER ILE SEQRES 49 A 681 ARG SER LYS TYR LYS GLN ASP PRO SER TRP PRO ASN VAL SEQRES 50 A 681 GLU ALA ALA LEU ALA ASN GLY THR GLY VAL ASP MET THR SEQRES 51 A 681 TYR HIS ARG PHE TRP GLY GLN SER ASP ILE ALA ILE ALA SEQRES 52 A 681 PHE GLY THR TYR GLY THR LEU PHE THR ASP PRO THR PRO SEQRES 53 A 681 GLY LEU LYS GLY ASP HET GLC B 1 12 HET BGC B 2 11 HET BGC C 1 12 HET BGC C 2 11 HET BGC D 1 12 HET BGC D 2 11 HET EDO A 702 4 HET CA A 705 1 HET CA A 706 1 HETNAM GLC ALPHA-D-GLUCOPYRANOSE HETNAM BGC BETA-D-GLUCOPYRANOSE HETNAM EDO 1,2-ETHANEDIOL HETNAM CA CALCIUM ION HETSYN GLC ALPHA-D-GLUCOSE; D-GLUCOSE; GLUCOSE HETSYN BGC BETA-D-GLUCOSE; D-GLUCOSE; GLUCOSE HETSYN EDO ETHYLENE GLYCOL FORMUL 2 GLC C6 H12 O6 FORMUL 2 BGC 5(C6 H12 O6) FORMUL 5 EDO C2 H6 O2 FORMUL 6 CA 2(CA 2+) FORMUL 8 HOH *597(H2 O) HELIX 1 AA1 ASN A 2 ASN A 17 1 16 HELIX 2 AA2 ALA A 18 GLY A 21 5 4 HELIX 3 AA3 SER A 49 GLY A 67 1 19 HELIX 4 AA4 PHE A 69 ILE A 83 1 15 HELIX 5 AA5 PRO A 91 SER A 96 1 6 HELIX 6 AA6 ASP A 112 TYR A 116 5 5 HELIX 7 AA7 LEU A 131 GLY A 140 1 10 HELIX 8 AA8 PHE A 201 LEU A 204 5 4 HELIX 9 AA9 ALA A 220 GLY A 242 1 23 HELIX 10 AB1 ILE A 245 LEU A 259 1 15 HELIX 11 AB2 ARG A 260 PHE A 264 5 5 HELIX 12 AB3 GLY A 280 ALA A 284 5 5 HELIX 13 AB4 GLY A 314 GLN A 316 5 3 HELIX 14 AB5 ASN A 317 THR A 327 1 11 HELIX 15 AB6 ASN A 336 LEU A 355 1 20 HELIX 16 AB7 SER A 369 SER A 373 5 5 HELIX 17 AB8 PHE A 404 LYS A 422 1 19 HELIX 18 AB9 ASP A 423 ALA A 425 5 3 HELIX 19 AC1 ALA A 426 ASN A 440 1 15 HELIX 20 AC2 ASP A 485 GLU A 504 1 20 HELIX 21 AC3 ASP A 508 TYR A 533 1 26 HELIX 22 AC4 ASN A 546 GLN A 553 5 8 HELIX 23 AC5 ARG A 581 ASP A 587 5 7 HELIX 24 AC6 SER A 589 ASN A 599 1 11 HELIX 25 AC7 ARG A 609 PHE A 627 1 19 SHEET 1 AA1 4 GLU A 46 THR A 48 0 SHEET 2 AA1 4 LEU A 150 ASP A 152 -1 O LEU A 151 N THR A 47 SHEET 3 AA1 4 VAL A 168 ASN A 171 -1 O VAL A 168 N ASP A 152 SHEET 4 AA1 4 GLN A 187 PRO A 188 -1 O GLN A 187 N ASN A 171 SHEET 1 AA2 2 SER A 118 GLN A 119 0 SHEET 2 AA2 2 THR A 206 GLY A 207 1 O GLY A 207 N SER A 118 SHEET 1 AA3 4 LYS A 190 ASP A 191 0 SHEET 2 AA3 4 GLN A 214 THR A 218 -1 O GLN A 214 N ASP A 191 SHEET 3 AA3 4 ALA A 293 GLY A 297 -1 O TRP A 294 N TYR A 217 SHEET 4 AA3 4 SER A 303 ILE A 306 -1 O ILE A 306 N ALA A 293 SHEET 1 AA4 4 HIS A 310 HIS A 312 0 SHEET 2 AA4 4 GLY A 365 SER A 367 -1 O ALA A 366 N ASN A 311 SHEET 3 AA4 4 MET A 387 THR A 390 -1 O THR A 390 N GLY A 365 SHEET 4 AA4 4 THR A 383 PHE A 384 -1 N PHE A 384 O MET A 387 SHEET 1 AA5 3 GLN A 442 ASP A 444 0 SHEET 2 AA5 3 LYS A 449 GLY A 460 -1 O LYS A 449 N ASP A 444 SHEET 3 AA5 3 LEU A 475 GLY A 483 -1 O ALA A 481 N ALA A 454 SHEET 1 AA6 2 THR A 542 ARG A 545 0 SHEET 2 AA6 2 VAL A 603 THR A 606 -1 O VAL A 603 N ARG A 545 SHEET 1 AA7 2 GLY A 563 LYS A 564 0 SHEET 2 AA7 2 VAL A 570 ILE A 571 -1 O ILE A 571 N GLY A 563 LINK O4 GLC B 1 C1 BGC B 2 1555 1555 1.41 LINK O4 BGC C 1 C1 BGC C 2 1555 1555 1.42 LINK O4 BGC D 1 C1 BGC D 2 1555 1555 1.42 LINK OE1 GLU A 26 CA CA A 706 1555 1555 2.58 LINK OE2 GLU A 26 CA CA A 706 1555 1555 2.38 LINK O VAL A 153 CA CA A 706 1555 1555 2.50 LINK OD1 ASP A 154 CA CA A 706 1555 1555 2.35 LINK O THR A 165 CA CA A 706 1555 1555 2.30 LINK O GLN A 178 CA CA A 705 1555 1555 2.35 LINK OE1 GLN A 178 CA CA A 705 1555 1555 2.62 LINK OE1 GLU A 183 CA CA A 705 1555 1555 3.02 LINK OE2 GLU A 183 CA CA A 705 1555 1555 2.50 LINK OD2 ASP A 397 CA CA A 705 1555 1555 2.39 LINK CA CA A 705 O HOH A1276 1555 1555 2.47 LINK CA CA A 705 O HOH A1386 1555 1555 2.63 LINK CA CA A 706 O HOH A 901 1555 1555 2.55 CISPEP 1 TYR A 116 PRO A 117 0 7.85 CISPEP 2 ASP A 397 PRO A 398 0 1.14 CRYST1 109.140 109.140 182.145 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009163 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009163 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005490 0.00000