data_4XXE # _entry.id 4XXE # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4XXE pdb_00004xxe 10.2210/pdb4xxe/pdb WWPDB D_1000206427 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2016-04-06 2 'Structure model' 1 1 2019-12-18 3 'Structure model' 1 2 2024-03-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 2 'Structure model' 'Derived calculations' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 2 'Structure model' pdbx_struct_oper_list 4 3 'Structure model' chem_comp_atom 5 3 'Structure model' chem_comp_bond 6 3 'Structure model' database_2 7 3 'Structure model' struct_ncs_dom_lim # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' 4 2 'Structure model' '_citation.pdbx_database_id_PubMed' 5 2 'Structure model' '_citation.title' 6 2 'Structure model' '_pdbx_struct_oper_list.symmetry_operation' 7 3 'Structure model' '_database_2.pdbx_DOI' 8 3 'Structure model' '_database_2.pdbx_database_accession' 9 3 'Structure model' '_struct_ncs_dom_lim.beg_auth_comp_id' 10 3 'Structure model' '_struct_ncs_dom_lim.beg_label_asym_id' 11 3 'Structure model' '_struct_ncs_dom_lim.beg_label_comp_id' 12 3 'Structure model' '_struct_ncs_dom_lim.beg_label_seq_id' 13 3 'Structure model' '_struct_ncs_dom_lim.end_auth_comp_id' 14 3 'Structure model' '_struct_ncs_dom_lim.end_label_asym_id' 15 3 'Structure model' '_struct_ncs_dom_lim.end_label_comp_id' 16 3 'Structure model' '_struct_ncs_dom_lim.end_label_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 4XXE _pdbx_database_status.recvd_initial_deposition_date 2015-01-30 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Gopal, B.' 1 'Rajasree, K.' 2 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country NE _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Biochem Biophys Rep' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2405-5808 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 6 _citation.language ? _citation.page_first 124 _citation.page_last 134 _citation.title 'Conformational features of theStaphylococcus aureusAgrA-promoter interactions rationalize quorum-sensing triggered gene expression.' _citation.year 2016 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.bbrep.2016.03.012 _citation.pdbx_database_id_PubMed 28955870 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Rajasree, K.' 1 ? primary 'Fasim, A.' 2 ? primary 'Gopal, B.' 3 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Accessory gene regulator A' 11910.455 2 ? ? 'UNP RESIDUES 140-238' ? 2 polymer syn ;DNA (5'-D(P*TP*AP*CP*AP*GP*TP*TP*AP*GP*GP*CP*AP*A)-3') ; 3999.635 1 ? ? ? ? 3 polymer syn ;DNA (5'-D(*AP*TP*TP*GP*CP*CP*TP*AP*AP*CP*TP*GP*TP*AP*G)-3') ; 4583.997 2 ? ? ? ? 4 polymer syn ;DNA (5'-D(P*TP*AP*CP*AP*GP*TP*TP*AP*GP*GP*CP*AP*T)-3') ; 3990.621 1 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;VETIELKRGSNSVYVQYDDIMFFESSTKSHRLIAHLDNRQIEFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKERI VYFKNKEHCYASVRNVKKI ; ;VETIELKRGSNSVYVQYDDIMFFESSTKSHRLIAHLDNRQIEFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKERI VYFKNKEHCYASVRNVKKI ; A,D ? 2 polydeoxyribonucleotide no no '(DT)(DA)(DC)(DA)(DG)(DT)(DT)(DA)(DG)(DG)(DC)(DA)(DA)' TACAGTTAGGCAA B ? 3 polydeoxyribonucleotide no no '(DA)(DT)(DT)(DG)(DC)(DC)(DT)(DA)(DA)(DC)(DT)(DG)(DT)(DA)(DG)' ATTGCCTAACTGTAG C,F ? 4 polydeoxyribonucleotide no no '(DT)(DA)(DC)(DA)(DG)(DT)(DT)(DA)(DG)(DG)(DC)(DA)(DT)' TACAGTTAGGCAT E ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 VAL n 1 2 GLU n 1 3 THR n 1 4 ILE n 1 5 GLU n 1 6 LEU n 1 7 LYS n 1 8 ARG n 1 9 GLY n 1 10 SER n 1 11 ASN n 1 12 SER n 1 13 VAL n 1 14 TYR n 1 15 VAL n 1 16 GLN n 1 17 TYR n 1 18 ASP n 1 19 ASP n 1 20 ILE n 1 21 MET n 1 22 PHE n 1 23 PHE n 1 24 GLU n 1 25 SER n 1 26 SER n 1 27 THR n 1 28 LYS n 1 29 SER n 1 30 HIS n 1 31 ARG n 1 32 LEU n 1 33 ILE n 1 34 ALA n 1 35 HIS n 1 36 LEU n 1 37 ASP n 1 38 ASN n 1 39 ARG n 1 40 GLN n 1 41 ILE n 1 42 GLU n 1 43 PHE n 1 44 TYR n 1 45 GLY n 1 46 ASN n 1 47 LEU n 1 48 LYS n 1 49 GLU n 1 50 LEU n 1 51 SER n 1 52 GLN n 1 53 LEU n 1 54 ASP n 1 55 ASP n 1 56 ARG n 1 57 PHE n 1 58 PHE n 1 59 ARG n 1 60 CYS n 1 61 HIS n 1 62 ASN n 1 63 SER n 1 64 PHE n 1 65 VAL n 1 66 VAL n 1 67 ASN n 1 68 ARG n 1 69 HIS n 1 70 ASN n 1 71 ILE n 1 72 GLU n 1 73 SER n 1 74 ILE n 1 75 ASP n 1 76 SER n 1 77 LYS n 1 78 GLU n 1 79 ARG n 1 80 ILE n 1 81 VAL n 1 82 TYR n 1 83 PHE n 1 84 LYS n 1 85 ASN n 1 86 LYS n 1 87 GLU n 1 88 HIS n 1 89 CYS n 1 90 TYR n 1 91 ALA n 1 92 SER n 1 93 VAL n 1 94 ARG n 1 95 ASN n 1 96 VAL n 1 97 LYS n 1 98 LYS n 1 99 ILE n 2 1 DT n 2 2 DA n 2 3 DC n 2 4 DA n 2 5 DG n 2 6 DT n 2 7 DT n 2 8 DA n 2 9 DG n 2 10 DG n 2 11 DC n 2 12 DA n 2 13 DA n 3 1 DA n 3 2 DT n 3 3 DT n 3 4 DG n 3 5 DC n 3 6 DC n 3 7 DT n 3 8 DA n 3 9 DA n 3 10 DC n 3 11 DT n 3 12 DG n 3 13 DT n 3 14 DA n 3 15 DG n 4 1 DT n 4 2 DA n 4 3 DC n 4 4 DA n 4 5 DG n 4 6 DT n 4 7 DT n 4 8 DA n 4 9 DG n 4 10 DG n 4 11 DC n 4 12 DA n 4 13 DT n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 99 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'agrA, SACOL2026' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain COL _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Staphylococcus aureus (strain COL)' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 93062 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain RosettapLysS _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET22b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample 1 13 'synthetic construct' ? 32630 ? 3 1 sample 1 15 'synthetic construct' ? 32630 ? 4 1 sample 1 13 'synthetic construct' ? 32630 ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 VAL 1 140 140 VAL VAL A . n A 1 2 GLU 2 141 141 GLU GLU A . n A 1 3 THR 3 142 142 THR THR A . n A 1 4 ILE 4 143 143 ILE ILE A . n A 1 5 GLU 5 144 144 GLU GLU A . n A 1 6 LEU 6 145 145 LEU LEU A . n A 1 7 LYS 7 146 146 LYS LYS A . n A 1 8 ARG 8 147 147 ARG ARG A . n A 1 9 GLY 9 148 148 GLY GLY A . n A 1 10 SER 10 149 149 SER SER A . n A 1 11 ASN 11 150 150 ASN ASN A . n A 1 12 SER 12 151 151 SER SER A . n A 1 13 VAL 13 152 152 VAL VAL A . n A 1 14 TYR 14 153 153 TYR TYR A . n A 1 15 VAL 15 154 154 VAL VAL A . n A 1 16 GLN 16 155 155 GLN GLN A . n A 1 17 TYR 17 156 156 TYR TYR A . n A 1 18 ASP 18 157 157 ASP ASP A . n A 1 19 ASP 19 158 158 ASP ASP A . n A 1 20 ILE 20 159 159 ILE ILE A . n A 1 21 MET 21 160 160 MET MET A . n A 1 22 PHE 22 161 161 PHE PHE A . n A 1 23 PHE 23 162 162 PHE PHE A . n A 1 24 GLU 24 163 163 GLU GLU A . n A 1 25 SER 25 164 164 SER SER A . n A 1 26 SER 26 165 165 SER SER A . n A 1 27 THR 27 166 166 THR THR A . n A 1 28 LYS 28 167 167 LYS LYS A . n A 1 29 SER 29 168 168 SER SER A . n A 1 30 HIS 30 169 169 HIS HIS A . n A 1 31 ARG 31 170 170 ARG ARG A . n A 1 32 LEU 32 171 171 LEU LEU A . n A 1 33 ILE 33 172 172 ILE ILE A . n A 1 34 ALA 34 173 173 ALA ALA A . n A 1 35 HIS 35 174 174 HIS HIS A . n A 1 36 LEU 36 175 175 LEU LEU A . n A 1 37 ASP 37 176 176 ASP ASP A . n A 1 38 ASN 38 177 177 ASN ASN A . n A 1 39 ARG 39 178 178 ARG ARG A . n A 1 40 GLN 40 179 179 GLN GLN A . n A 1 41 ILE 41 180 180 ILE ILE A . n A 1 42 GLU 42 181 181 GLU GLU A . n A 1 43 PHE 43 182 182 PHE PHE A . n A 1 44 TYR 44 183 183 TYR TYR A . n A 1 45 GLY 45 184 184 GLY GLY A . n A 1 46 ASN 46 185 185 ASN ASN A . n A 1 47 LEU 47 186 186 LEU LEU A . n A 1 48 LYS 48 187 187 LYS LYS A . n A 1 49 GLU 49 188 188 GLU GLU A . n A 1 50 LEU 50 189 189 LEU LEU A . n A 1 51 SER 51 190 190 SER SER A . n A 1 52 GLN 52 191 191 GLN GLN A . n A 1 53 LEU 53 192 192 LEU LEU A . n A 1 54 ASP 54 193 193 ASP ASP A . n A 1 55 ASP 55 194 194 ASP ASP A . n A 1 56 ARG 56 195 195 ARG ARG A . n A 1 57 PHE 57 196 196 PHE PHE A . n A 1 58 PHE 58 197 197 PHE PHE A . n A 1 59 ARG 59 198 198 ARG ARG A . n A 1 60 CYS 60 199 199 CYS CYS A . n A 1 61 HIS 61 200 200 HIS HIS A . n A 1 62 ASN 62 201 201 ASN ASN A . n A 1 63 SER 63 202 202 SER SER A . n A 1 64 PHE 64 203 203 PHE PHE A . n A 1 65 VAL 65 204 204 VAL VAL A . n A 1 66 VAL 66 205 205 VAL VAL A . n A 1 67 ASN 67 206 206 ASN ASN A . n A 1 68 ARG 68 207 207 ARG ARG A . n A 1 69 HIS 69 208 208 HIS HIS A . n A 1 70 ASN 70 209 209 ASN ASN A . n A 1 71 ILE 71 210 210 ILE ILE A . n A 1 72 GLU 72 211 211 GLU GLU A . n A 1 73 SER 73 212 212 SER SER A . n A 1 74 ILE 74 213 213 ILE ILE A . n A 1 75 ASP 75 214 214 ASP ASP A . n A 1 76 SER 76 215 215 SER SER A . n A 1 77 LYS 77 216 216 LYS LYS A . n A 1 78 GLU 78 217 217 GLU GLU A . n A 1 79 ARG 79 218 218 ARG ARG A . n A 1 80 ILE 80 219 219 ILE ILE A . n A 1 81 VAL 81 220 220 VAL VAL A . n A 1 82 TYR 82 221 221 TYR TYR A . n A 1 83 PHE 83 222 222 PHE PHE A . n A 1 84 LYS 84 223 223 LYS LYS A . n A 1 85 ASN 85 224 224 ASN ASN A . n A 1 86 LYS 86 225 225 LYS LYS A . n A 1 87 GLU 87 226 226 GLU GLU A . n A 1 88 HIS 88 227 227 HIS HIS A . n A 1 89 CYS 89 228 228 CYS CYS A . n A 1 90 TYR 90 229 229 TYR TYR A . n A 1 91 ALA 91 230 230 ALA ALA A . n A 1 92 SER 92 231 231 SER SER A . n A 1 93 VAL 93 232 232 VAL VAL A . n A 1 94 ARG 94 233 233 ARG ARG A . n A 1 95 ASN 95 234 234 ASN ASN A . n A 1 96 VAL 96 235 235 VAL VAL A . n A 1 97 LYS 97 236 236 LYS LYS A . n A 1 98 LYS 98 237 237 LYS LYS A . n A 1 99 ILE 99 238 238 ILE ILE A . n B 2 1 DT 1 4 4 DT DT B . n B 2 2 DA 2 5 5 DA DA B . n B 2 3 DC 3 6 6 DC DC B . n B 2 4 DA 4 7 7 DA DA B . n B 2 5 DG 5 8 8 DG DG B . n B 2 6 DT 6 9 9 DT DT B . n B 2 7 DT 7 10 10 DT DT B . n B 2 8 DA 8 11 11 DA DA B . n B 2 9 DG 9 12 12 DG DG B . n B 2 10 DG 10 13 13 DG DG B . n B 2 11 DC 11 14 14 DC DC B . n B 2 12 DA 12 15 15 DA DA B . n B 2 13 DA 13 16 16 DA DA B . n C 3 1 DA 1 1 1 DA DA C . n C 3 2 DT 2 2 2 DT DT C . n C 3 3 DT 3 3 3 DT DT C . n C 3 4 DG 4 4 4 DG DG C . n C 3 5 DC 5 5 5 DC DC C . n C 3 6 DC 6 6 6 DC DC C . n C 3 7 DT 7 7 7 DT DT C . n C 3 8 DA 8 8 8 DA DA C . n C 3 9 DA 9 9 9 DA DA C . n C 3 10 DC 10 10 10 DC DC C . n C 3 11 DT 11 11 11 DT DT C . n C 3 12 DG 12 12 12 DG DG C . n C 3 13 DT 13 13 13 DT DT C . n C 3 14 DA 14 14 14 DA DA C . n C 3 15 DG 15 15 15 DG DG C . n D 1 1 VAL 1 140 140 VAL VAL D . n D 1 2 GLU 2 141 141 GLU GLU D . n D 1 3 THR 3 142 142 THR THR D . n D 1 4 ILE 4 143 143 ILE ILE D . n D 1 5 GLU 5 144 144 GLU GLU D . n D 1 6 LEU 6 145 145 LEU LEU D . n D 1 7 LYS 7 146 146 LYS LYS D . n D 1 8 ARG 8 147 147 ARG ARG D . n D 1 9 GLY 9 148 148 GLY GLY D . n D 1 10 SER 10 149 149 SER SER D . n D 1 11 ASN 11 150 150 ASN ASN D . n D 1 12 SER 12 151 151 SER SER D . n D 1 13 VAL 13 152 152 VAL VAL D . n D 1 14 TYR 14 153 153 TYR TYR D . n D 1 15 VAL 15 154 154 VAL VAL D . n D 1 16 GLN 16 155 155 GLN GLN D . n D 1 17 TYR 17 156 156 TYR TYR D . n D 1 18 ASP 18 157 157 ASP ASP D . n D 1 19 ASP 19 158 158 ASP ASP D . n D 1 20 ILE 20 159 159 ILE ILE D . n D 1 21 MET 21 160 160 MET MET D . n D 1 22 PHE 22 161 161 PHE PHE D . n D 1 23 PHE 23 162 162 PHE PHE D . n D 1 24 GLU 24 163 163 GLU GLU D . n D 1 25 SER 25 164 164 SER SER D . n D 1 26 SER 26 165 165 SER SER D . n D 1 27 THR 27 166 166 THR THR D . n D 1 28 LYS 28 167 167 LYS LYS D . n D 1 29 SER 29 168 168 SER SER D . n D 1 30 HIS 30 169 169 HIS HIS D . n D 1 31 ARG 31 170 170 ARG ARG D . n D 1 32 LEU 32 171 171 LEU LEU D . n D 1 33 ILE 33 172 172 ILE ILE D . n D 1 34 ALA 34 173 173 ALA ALA D . n D 1 35 HIS 35 174 174 HIS HIS D . n D 1 36 LEU 36 175 175 LEU LEU D . n D 1 37 ASP 37 176 176 ASP ASP D . n D 1 38 ASN 38 177 177 ASN ASN D . n D 1 39 ARG 39 178 178 ARG ARG D . n D 1 40 GLN 40 179 179 GLN GLN D . n D 1 41 ILE 41 180 180 ILE ILE D . n D 1 42 GLU 42 181 181 GLU GLU D . n D 1 43 PHE 43 182 182 PHE PHE D . n D 1 44 TYR 44 183 183 TYR TYR D . n D 1 45 GLY 45 184 184 GLY GLY D . n D 1 46 ASN 46 185 185 ASN ASN D . n D 1 47 LEU 47 186 186 LEU LEU D . n D 1 48 LYS 48 187 187 LYS LYS D . n D 1 49 GLU 49 188 188 GLU GLU D . n D 1 50 LEU 50 189 189 LEU LEU D . n D 1 51 SER 51 190 190 SER SER D . n D 1 52 GLN 52 191 191 GLN GLN D . n D 1 53 LEU 53 192 192 LEU LEU D . n D 1 54 ASP 54 193 193 ASP ASP D . n D 1 55 ASP 55 194 194 ASP ASP D . n D 1 56 ARG 56 195 195 ARG ARG D . n D 1 57 PHE 57 196 196 PHE PHE D . n D 1 58 PHE 58 197 197 PHE PHE D . n D 1 59 ARG 59 198 198 ARG ARG D . n D 1 60 CYS 60 199 199 CYS CYS D . n D 1 61 HIS 61 200 200 HIS HIS D . n D 1 62 ASN 62 201 201 ASN ASN D . n D 1 63 SER 63 202 202 SER SER D . n D 1 64 PHE 64 203 203 PHE PHE D . n D 1 65 VAL 65 204 204 VAL VAL D . n D 1 66 VAL 66 205 205 VAL VAL D . n D 1 67 ASN 67 206 206 ASN ASN D . n D 1 68 ARG 68 207 207 ARG ARG D . n D 1 69 HIS 69 208 208 HIS HIS D . n D 1 70 ASN 70 209 209 ASN ASN D . n D 1 71 ILE 71 210 210 ILE ILE D . n D 1 72 GLU 72 211 211 GLU GLU D . n D 1 73 SER 73 212 212 SER SER D . n D 1 74 ILE 74 213 213 ILE ILE D . n D 1 75 ASP 75 214 214 ASP ASP D . n D 1 76 SER 76 215 215 SER SER D . n D 1 77 LYS 77 216 216 LYS LYS D . n D 1 78 GLU 78 217 217 GLU GLU D . n D 1 79 ARG 79 218 218 ARG ARG D . n D 1 80 ILE 80 219 219 ILE ILE D . n D 1 81 VAL 81 220 220 VAL VAL D . n D 1 82 TYR 82 221 221 TYR TYR D . n D 1 83 PHE 83 222 222 PHE PHE D . n D 1 84 LYS 84 223 223 LYS LYS D . n D 1 85 ASN 85 224 224 ASN ASN D . n D 1 86 LYS 86 225 225 LYS LYS D . n D 1 87 GLU 87 226 226 GLU GLU D . n D 1 88 HIS 88 227 227 HIS HIS D . n D 1 89 CYS 89 228 228 CYS CYS D . n D 1 90 TYR 90 229 229 TYR TYR D . n D 1 91 ALA 91 230 230 ALA ALA D . n D 1 92 SER 92 231 231 SER SER D . n D 1 93 VAL 93 232 232 VAL VAL D . n D 1 94 ARG 94 233 233 ARG ARG D . n D 1 95 ASN 95 234 234 ASN ASN D . n D 1 96 VAL 96 235 235 VAL VAL D . n D 1 97 LYS 97 236 236 LYS LYS D . n D 1 98 LYS 98 237 237 LYS LYS D . n D 1 99 ILE 99 238 238 ILE ILE D . n E 4 1 DT 1 4 4 DT DT E . n E 4 2 DA 2 5 5 DA DA E . n E 4 3 DC 3 6 6 DC DC E . n E 4 4 DA 4 7 7 DA DA E . n E 4 5 DG 5 8 8 DG DG E . n E 4 6 DT 6 9 9 DT DT E . n E 4 7 DT 7 10 10 DT DT E . n E 4 8 DA 8 11 11 DA DA E . n E 4 9 DG 9 12 12 DG DG E . n E 4 10 DG 10 13 13 DG DG E . n E 4 11 DC 11 14 14 DC DC E . n E 4 12 DA 12 15 15 DA DA E . n E 4 13 DT 13 16 16 DT DT E . n F 3 1 DA 1 1 1 DA DA F . n F 3 2 DT 2 2 2 DT DT F . n F 3 3 DT 3 3 3 DT DT F . n F 3 4 DG 4 4 4 DG DG F . n F 3 5 DC 5 5 5 DC DC F . n F 3 6 DC 6 6 6 DC DC F . n F 3 7 DT 7 7 7 DT DT F . n F 3 8 DA 8 8 8 DA DA F . n F 3 9 DA 9 9 9 DA DA F . n F 3 10 DC 10 10 10 DC DC F . n F 3 11 DT 11 11 11 DT DT F . n F 3 12 DG 12 12 12 DG DG F . n F 3 13 DT 13 13 13 DT DT F . n F 3 14 DA 14 14 14 DA DA F . n F 3 15 DG 15 15 15 DG DG F . n # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 178 ? CG ? A ARG 39 CG 2 1 Y 1 A ARG 178 ? CD ? A ARG 39 CD 3 1 Y 1 A ARG 178 ? NE ? A ARG 39 NE 4 1 Y 1 A ARG 178 ? CZ ? A ARG 39 CZ 5 1 Y 1 A ARG 178 ? NH1 ? A ARG 39 NH1 6 1 Y 1 A ARG 178 ? NH2 ? A ARG 39 NH2 7 1 Y 1 A LYS 187 ? CG ? A LYS 48 CG 8 1 Y 1 A LYS 187 ? CD ? A LYS 48 CD 9 1 Y 1 A LYS 187 ? CE ? A LYS 48 CE 10 1 Y 1 A LYS 187 ? NZ ? A LYS 48 NZ 11 1 Y 1 A GLN 191 ? CG ? A GLN 52 CG 12 1 Y 1 A GLN 191 ? CD ? A GLN 52 CD 13 1 Y 1 A GLN 191 ? OE1 ? A GLN 52 OE1 14 1 Y 1 A GLN 191 ? NE2 ? A GLN 52 NE2 15 1 Y 1 A LEU 192 ? CG ? A LEU 53 CG 16 1 Y 1 A LEU 192 ? CD1 ? A LEU 53 CD1 17 1 Y 1 A LEU 192 ? CD2 ? A LEU 53 CD2 18 1 Y 1 A ASP 194 ? CG ? A ASP 55 CG 19 1 Y 1 A ASP 194 ? OD1 ? A ASP 55 OD1 20 1 Y 1 A ASP 194 ? OD2 ? A ASP 55 OD2 21 1 Y 1 A ARG 207 ? CG ? A ARG 68 CG 22 1 Y 1 A ARG 207 ? CD ? A ARG 68 CD 23 1 Y 1 A ARG 207 ? NE ? A ARG 68 NE 24 1 Y 1 A ARG 207 ? CZ ? A ARG 68 CZ 25 1 Y 1 A ARG 207 ? NH1 ? A ARG 68 NH1 26 1 Y 1 A ARG 207 ? NH2 ? A ARG 68 NH2 27 1 Y 1 A HIS 208 ? CG ? A HIS 69 CG 28 1 Y 1 A HIS 208 ? ND1 ? A HIS 69 ND1 29 1 Y 1 A HIS 208 ? CD2 ? A HIS 69 CD2 30 1 Y 1 A HIS 208 ? CE1 ? A HIS 69 CE1 31 1 Y 1 A HIS 208 ? NE2 ? A HIS 69 NE2 32 1 Y 1 A GLU 211 ? CG ? A GLU 72 CG 33 1 Y 1 A GLU 211 ? CD ? A GLU 72 CD 34 1 Y 1 A GLU 211 ? OE1 ? A GLU 72 OE1 35 1 Y 1 A GLU 211 ? OE2 ? A GLU 72 OE2 36 1 Y 1 A LYS 216 ? CG ? A LYS 77 CG 37 1 Y 1 A LYS 216 ? CD ? A LYS 77 CD 38 1 Y 1 A LYS 216 ? CE ? A LYS 77 CE 39 1 Y 1 A LYS 216 ? NZ ? A LYS 77 NZ 40 1 Y 1 A VAL 232 ? CG1 ? A VAL 93 CG1 41 1 Y 1 A VAL 232 ? CG2 ? A VAL 93 CG2 42 1 Y 1 A LYS 236 ? CG ? A LYS 97 CG 43 1 Y 1 A LYS 236 ? CD ? A LYS 97 CD 44 1 Y 1 A LYS 236 ? CE ? A LYS 97 CE 45 1 Y 1 A LYS 236 ? NZ ? A LYS 97 NZ 46 1 Y 1 D VAL 140 ? CG1 ? D VAL 1 CG1 47 1 Y 1 D VAL 140 ? CG2 ? D VAL 1 CG2 48 1 Y 1 D LYS 146 ? CG ? D LYS 7 CG 49 1 Y 1 D LYS 146 ? CD ? D LYS 7 CD 50 1 Y 1 D LYS 146 ? CE ? D LYS 7 CE 51 1 Y 1 D LYS 146 ? NZ ? D LYS 7 NZ 52 1 Y 1 D VAL 154 ? CG1 ? D VAL 15 CG1 53 1 Y 1 D VAL 154 ? CG2 ? D VAL 15 CG2 54 1 Y 1 D LYS 187 ? CG ? D LYS 48 CG 55 1 Y 1 D LYS 187 ? CD ? D LYS 48 CD 56 1 Y 1 D LYS 187 ? CE ? D LYS 48 CE 57 1 Y 1 D LYS 187 ? NZ ? D LYS 48 NZ 58 1 Y 1 D GLN 191 ? CG ? D GLN 52 CG 59 1 Y 1 D GLN 191 ? CD ? D GLN 52 CD 60 1 Y 1 D GLN 191 ? OE1 ? D GLN 52 OE1 61 1 Y 1 D GLN 191 ? NE2 ? D GLN 52 NE2 62 1 Y 1 D LEU 192 ? CG ? D LEU 53 CG 63 1 Y 1 D LEU 192 ? CD1 ? D LEU 53 CD1 64 1 Y 1 D LEU 192 ? CD2 ? D LEU 53 CD2 65 1 Y 1 D ASP 193 ? CG ? D ASP 54 CG 66 1 Y 1 D ASP 193 ? OD1 ? D ASP 54 OD1 67 1 Y 1 D ASP 193 ? OD2 ? D ASP 54 OD2 68 1 Y 1 D ASP 194 ? CG ? D ASP 55 CG 69 1 Y 1 D ASP 194 ? OD1 ? D ASP 55 OD1 70 1 Y 1 D ASP 194 ? OD2 ? D ASP 55 OD2 71 1 Y 1 D ARG 207 ? CG ? D ARG 68 CG 72 1 Y 1 D ARG 207 ? CD ? D ARG 68 CD 73 1 Y 1 D ARG 207 ? NE ? D ARG 68 NE 74 1 Y 1 D ARG 207 ? CZ ? D ARG 68 CZ 75 1 Y 1 D ARG 207 ? NH1 ? D ARG 68 NH1 76 1 Y 1 D ARG 207 ? NH2 ? D ARG 68 NH2 77 1 Y 1 D HIS 208 ? CG ? D HIS 69 CG 78 1 Y 1 D HIS 208 ? ND1 ? D HIS 69 ND1 79 1 Y 1 D HIS 208 ? CD2 ? D HIS 69 CD2 80 1 Y 1 D HIS 208 ? CE1 ? D HIS 69 CE1 81 1 Y 1 D HIS 208 ? NE2 ? D HIS 69 NE2 82 1 Y 1 D LYS 216 ? CG ? D LYS 77 CG 83 1 Y 1 D LYS 216 ? CD ? D LYS 77 CD 84 1 Y 1 D LYS 216 ? CE ? D LYS 77 CE 85 1 Y 1 D LYS 216 ? NZ ? D LYS 77 NZ 86 1 Y 1 D VAL 232 ? CG1 ? D VAL 93 CG1 87 1 Y 1 D VAL 232 ? CG2 ? D VAL 93 CG2 88 1 Y 1 D ARG 233 ? CG ? D ARG 94 CG 89 1 Y 1 D ARG 233 ? CD ? D ARG 94 CD 90 1 Y 1 D ARG 233 ? NE ? D ARG 94 NE 91 1 Y 1 D ARG 233 ? CZ ? D ARG 94 CZ 92 1 Y 1 D ARG 233 ? NH1 ? D ARG 94 NH1 93 1 Y 1 D ARG 233 ? NH2 ? D ARG 94 NH2 94 1 Y 1 D LYS 236 ? CG ? D LYS 97 CG 95 1 Y 1 D LYS 236 ? CD ? D LYS 97 CD 96 1 Y 1 D LYS 236 ? CE ? D LYS 97 CE 97 1 Y 1 D LYS 236 ? NZ ? D LYS 97 NZ # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0103 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? SCALA ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? SCALA ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 4XXE _cell.details ? _cell.formula_units_Z ? _cell.length_a 96.760 _cell.length_a_esd ? _cell.length_b 96.760 _cell.length_b_esd ? _cell.length_c 51.110 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 4XXE _symmetry.cell_setting ? _symmetry.Int_Tables_number 77 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 42' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 4XXE _exptl.crystals_number ? _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.92 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 57.87 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 6.0 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;6% Tacsimate pH 7.0 0.1M MES monohydrate pH 6.0 25% PEG4000 0.1M CoCl2 hexahydrate ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'MAR CCD 165 mm' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2013-07-06 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.95372 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'ESRF BEAMLINE BM14' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.95372 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BM14 _diffrn_source.pdbx_synchrotron_site ESRF # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 4XXE _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 3.2 _reflns.d_resolution_low 97.03 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 8048 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 100 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 8.1 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value 0.127 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 8.6 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 3.2 _reflns_shell.d_res_low 3.37 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 1.6 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all 100 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 8.2 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] -2.95 _refine.aniso_B[1][2] -0.00 _refine.aniso_B[1][3] -0.00 _refine.aniso_B[2][2] -2.95 _refine.aniso_B[2][3] -0.00 _refine.aniso_B[3][3] 5.90 _refine.B_iso_max ? _refine.B_iso_mean 131.789 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.812 _refine.correlation_coeff_Fo_to_Fc_free 0.873 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 4XXE _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 3.20 _refine.ls_d_res_low 96.76 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 7228 _refine.ls_number_reflns_R_free 759 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.94 _refine.ls_percent_reflns_R_free 9.5 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.31870 _refine.ls_R_factor_R_free 0.35517 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.31477 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details MASK _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct ? _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free 0.722 _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 58.993 _refine.overall_SU_ML 0.931 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1581 _refine_hist.pdbx_number_atoms_nucleic_acid 1145 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 2726 _refine_hist.d_res_high 3.20 _refine_hist.d_res_low 96.76 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.009 0.015 2893 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.003 0.020 2071 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.436 1.566 4144 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 1.641 3.000 4777 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 7.785 5.000 196 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 33.539 23.636 88 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 14.657 15.000 265 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 11.610 15.000 12 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.114 0.200 404 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.006 0.020 2547 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.003 0.020 690 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? 10.226 12.619 790 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? 10.215 12.616 789 ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? 15.690 18.876 984 ? r_mcangle_it ? ? 'X-RAY DIFFRACTION' ? 15.685 18.882 985 ? r_mcangle_other ? ? 'X-RAY DIFFRACTION' ? 11.479 14.352 2103 ? r_scbond_it ? ? 'X-RAY DIFFRACTION' ? 11.475 14.350 2102 ? r_scbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_scangle_it ? ? 'X-RAY DIFFRACTION' ? 18.229 21.515 3159 ? r_scangle_other ? ? 'X-RAY DIFFRACTION' ? 26.626 ? 11854 ? r_long_range_B_refined ? ? 'X-RAY DIFFRACTION' ? 26.626 ? 11855 ? r_long_range_B_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_rigid_bond_restr ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_free ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_bonded ? ? # loop_ _refine_ls_restr_ncs.pdbx_refine_id _refine_ls_restr_ncs.dom_id _refine_ls_restr_ncs.pdbx_ens_id _refine_ls_restr_ncs.pdbx_ordinal _refine_ls_restr_ncs.ncs_model_details _refine_ls_restr_ncs.rms_dev_position _refine_ls_restr_ncs.weight_position _refine_ls_restr_ncs.rms_dev_B_iso _refine_ls_restr_ncs.weight_B_iso _refine_ls_restr_ncs.pdbx_auth_asym_id _refine_ls_restr_ncs.pdbx_number _refine_ls_restr_ncs.pdbx_type _refine_ls_restr_ncs.pdbx_asym_id _refine_ls_restr_ncs.pdbx_rms _refine_ls_restr_ncs.pdbx_weight 'X-RAY DIFFRACTION' 1 1 1 ? 0.03 0.05 ? ? A 11058 'interatomic distance' ? ? ? 'X-RAY DIFFRACTION' 2 1 2 ? 0.03 0.05 ? ? D 11058 'interatomic distance' ? ? ? 'X-RAY DIFFRACTION' 1 2 3 ? 0.05 0.05 ? ? B 1972 'interatomic distance' ? ? ? 'X-RAY DIFFRACTION' 2 2 4 ? 0.05 0.05 ? ? E 1972 'interatomic distance' ? ? ? 'X-RAY DIFFRACTION' 1 3 5 ? 0.01 0.05 ? ? C 2340 'interatomic distance' ? ? ? 'X-RAY DIFFRACTION' 2 3 6 ? 0.01 0.05 ? ? F 2340 'interatomic distance' ? ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 3.200 _refine_ls_shell.d_res_low 3.283 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 58 _refine_ls_shell.number_reflns_R_work 501 _refine_ls_shell.percent_reflns_obs 100.00 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.518 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.457 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # loop_ _struct_ncs_dom.id _struct_ncs_dom.details _struct_ncs_dom.pdbx_ens_id 1 A 1 2 D 1 1 B 2 2 E 2 1 C 3 2 F 3 # loop_ _struct_ncs_dom_lim.pdbx_ens_id _struct_ncs_dom_lim.dom_id _struct_ncs_dom_lim.pdbx_component_id _struct_ncs_dom_lim.beg_label_asym_id _struct_ncs_dom_lim.beg_label_comp_id _struct_ncs_dom_lim.beg_label_seq_id _struct_ncs_dom_lim.beg_label_alt_id _struct_ncs_dom_lim.end_label_asym_id _struct_ncs_dom_lim.end_label_comp_id _struct_ncs_dom_lim.end_label_seq_id _struct_ncs_dom_lim.end_label_alt_id _struct_ncs_dom_lim.beg_auth_asym_id _struct_ncs_dom_lim.beg_auth_comp_id _struct_ncs_dom_lim.beg_auth_seq_id _struct_ncs_dom_lim.end_auth_asym_id _struct_ncs_dom_lim.end_auth_comp_id _struct_ncs_dom_lim.end_auth_seq_id _struct_ncs_dom_lim.pdbx_refine_code _struct_ncs_dom_lim.selection_details 1 1 0 A VAL 1 . A ILE 99 . A VAL 140 A ILE 238 0 ? 1 2 0 D VAL 1 . D ILE 99 . D VAL 140 D ILE 238 0 ? 2 1 0 B DT 1 . B DA 13 . B DT 4 B DA 16 0 ? 2 2 0 E DT 1 . E DT 13 . E DT 4 E DT 16 0 ? 3 1 0 C DA 1 . C DG 15 . C DA 1 C DG 15 0 ? 3 2 0 F DA 1 . F DG 15 . F DA 1 F DG 15 0 ? # loop_ _struct_ncs_ens.id _struct_ncs_ens.details 1 ? 2 ? 3 ? # _struct.entry_id 4XXE _struct.title 'Structure of AgrA LytTR domain in complex with promoters' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 4XXE _struct_keywords.text 'Protein-DNA complex, TRANSCRIPTION-DNA complex' _struct_keywords.pdbx_keywords TRANSCRIPTION/DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 1 ? E N N 4 ? F N N 3 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP AGRA_STAAC Q5HEG2 ? 1 ;VETIELKRGSNSVYVQYDDIMFFESSTKSHRLIAHLDNRQIEFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKERI VYFKNKEHCYASVRNVKKI ; 140 2 PDB 4XXE 4XXE ? 2 ? 1 3 PDB 4XXE 4XXE ? 3 ? 1 4 PDB 4XXE 4XXE ? 4 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4XXE A 1 ? 99 ? Q5HEG2 140 ? 238 ? 140 238 2 2 4XXE B 1 ? 13 ? 4XXE 4 ? 16 ? 4 16 3 3 4XXE C 1 ? 15 ? 4XXE 1 ? 15 ? 1 15 4 1 4XXE D 1 ? 99 ? Q5HEG2 140 ? 238 ? 140 238 5 4 4XXE E 1 ? 13 ? 4XXE 4 ? 16 ? 4 16 6 3 4XXE F 1 ? 15 ? 4XXE 1 ? 15 ? 1 15 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 7000 ? 1 MORE -43 ? 1 'SSA (A^2)' 17750 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASN A 46 ? GLN A 52 ? ASN A 185 GLN A 191 1 ? 7 HELX_P HELX_P2 AA2 SER A 92 ? LYS A 97 ? SER A 231 LYS A 236 1 ? 6 HELX_P HELX_P3 AA3 ASN D 46 ? GLN D 52 ? ASN D 185 GLN D 191 1 ? 7 HELX_P HELX_P4 AA4 SER D 92 ? LYS D 97 ? SER D 231 LYS D 236 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? B DT 1 N3 ? ? ? 1_555 C DA 14 N1 ? ? B DT 4 C DA 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B DT 1 O4 ? ? ? 1_555 C DA 14 N6 ? ? B DT 4 C DA 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B DT 1 O2 ? ? ? 1_555 C DG 15 N2 ? ? B DT 4 C DG 15 1_555 ? ? ? ? ? ? 'DT-DG MISPAIR' ? ? ? hydrog4 hydrog ? ? B DA 2 N1 ? ? ? 1_555 C DT 13 N3 ? ? B DA 5 C DT 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B DA 2 N6 ? ? ? 1_555 C DT 13 O4 ? ? B DA 5 C DT 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B DC 3 N4 ? ? ? 1_555 C DG 12 O6 ? ? B DC 6 C DG 12 1_555 ? ? ? ? ? ? 'DC-DG PAIR' ? ? ? hydrog7 hydrog ? ? B DG 5 N1 ? ? ? 1_555 C DC 10 N3 ? ? B DG 8 C DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B DG 5 N2 ? ? ? 1_555 C DC 10 O2 ? ? B DG 8 C DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B DG 5 O6 ? ? ? 1_555 C DC 10 N4 ? ? B DG 8 C DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B DT 6 N3 ? ? ? 1_555 C DA 9 N1 ? ? B DT 9 C DA 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B DT 6 O4 ? ? ? 1_555 C DA 9 N6 ? ? B DT 9 C DA 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B DT 7 N3 ? ? ? 1_555 C DA 8 N1 ? ? B DT 10 C DA 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B DT 7 O4 ? ? ? 1_555 C DA 8 N6 ? ? B DT 10 C DA 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B DA 8 N1 ? ? ? 1_555 C DT 7 N3 ? ? B DA 11 C DT 7 1_555 ? ? ? ? ? ? 'DA-DT PAIR' ? ? ? hydrog15 hydrog ? ? B DG 9 N1 ? ? ? 1_555 C DC 6 N3 ? ? B DG 12 C DC 6 1_555 ? ? ? ? ? ? 'DG-DC PAIR' ? ? ? hydrog16 hydrog ? ? B DG 10 N1 ? ? ? 1_555 C DC 5 N3 ? ? B DG 13 C DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B DG 10 N2 ? ? ? 1_555 C DC 5 O2 ? ? B DG 13 C DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B DG 10 O6 ? ? ? 1_555 C DC 5 N4 ? ? B DG 13 C DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B DC 11 N3 ? ? ? 1_555 C DG 4 N1 ? ? B DC 14 C DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? B DC 11 N4 ? ? ? 1_555 C DG 4 O6 ? ? B DC 14 C DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? B DC 11 O2 ? ? ? 1_555 C DG 4 N2 ? ? B DC 14 C DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? B DA 12 N1 ? ? ? 1_555 C DT 3 N3 ? ? B DA 15 C DT 3 1_555 ? ? ? ? ? ? 'DA-DT PAIR' ? ? ? hydrog23 hydrog ? ? B DA 13 N1 ? ? ? 1_555 C DT 2 N3 ? ? B DA 16 C DT 2 1_555 ? ? ? ? ? ? 'DA-DT PAIR' ? ? ? hydrog24 hydrog ? ? E DT 1 O4 ? ? ? 1_555 F DA 14 N6 ? ? E DT 4 F DA 14 1_555 ? ? ? ? ? ? 'DT-DA PAIR' ? ? ? hydrog25 hydrog ? ? E DA 2 N6 ? ? ? 1_555 F DT 13 O4 ? ? E DA 5 F DT 13 1_555 ? ? ? ? ? ? 'DA-DT PAIR' ? ? ? hydrog26 hydrog ? ? E DC 3 N4 ? ? ? 1_555 F DG 12 O6 ? ? E DC 6 F DG 12 1_555 ? ? ? ? ? ? 'DC-DG PAIR' ? ? ? hydrog27 hydrog ? ? E DA 4 N1 ? ? ? 1_555 F DT 11 N3 ? ? E DA 7 F DT 11 1_555 ? ? ? ? ? ? 'DA-DT PAIR' ? ? ? hydrog28 hydrog ? ? E DG 5 N1 ? ? ? 1_555 F DC 10 N3 ? ? E DG 8 F DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? E DG 5 N2 ? ? ? 1_555 F DC 10 O2 ? ? E DG 8 F DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? E DG 5 O6 ? ? ? 1_555 F DC 10 N4 ? ? E DG 8 F DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? E DT 6 N3 ? ? ? 1_555 F DA 9 N1 ? ? E DT 9 F DA 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? E DT 6 O4 ? ? ? 1_555 F DA 9 N6 ? ? E DT 9 F DA 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? E DT 7 N3 ? ? ? 1_555 F DA 8 N1 ? ? E DT 10 F DA 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? E DT 7 O4 ? ? ? 1_555 F DA 8 N6 ? ? E DT 10 F DA 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? E DA 8 N6 ? ? ? 1_555 F DC 6 N3 ? ? E DA 11 F DC 6 1_555 ? ? ? ? ? ? 'DA-DC MISPAIR' ? ? ? hydrog36 hydrog ? ? E DA 8 N1 ? ? ? 1_555 F DT 7 N3 ? ? E DA 11 F DT 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? E DA 8 N6 ? ? ? 1_555 F DT 7 O4 ? ? E DA 11 F DT 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? E DG 9 N1 ? ? ? 1_555 F DC 6 N3 ? ? E DG 12 F DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? E DG 9 N2 ? ? ? 1_555 F DC 6 O2 ? ? E DG 12 F DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? E DG 9 O6 ? ? ? 1_555 F DC 6 N4 ? ? E DG 12 F DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? E DG 10 N1 ? ? ? 1_555 F DC 5 N3 ? ? E DG 13 F DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? E DG 10 N2 ? ? ? 1_555 F DC 5 O2 ? ? E DG 13 F DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? E DG 10 O6 ? ? ? 1_555 F DC 5 N4 ? ? E DG 13 F DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? E DC 11 N3 ? ? ? 1_555 F DG 4 N1 ? ? E DC 14 F DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? E DC 11 N4 ? ? ? 1_555 F DG 4 O6 ? ? E DC 14 F DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? E DC 11 O2 ? ? ? 1_555 F DG 4 N2 ? ? E DC 14 F DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? E DA 12 N1 ? ? ? 1_555 F DT 3 N3 ? ? E DA 15 F DT 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? E DA 12 N6 ? ? ? 1_555 F DT 3 O4 ? ? E DA 15 F DT 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 2 ? AA2 ? 5 ? AA3 ? 3 ? AA4 ? 2 ? AA5 ? 5 ? AA6 ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA4 1 2 ? anti-parallel AA5 1 2 ? anti-parallel AA5 2 3 ? anti-parallel AA5 3 4 ? anti-parallel AA5 4 5 ? anti-parallel AA6 1 2 ? anti-parallel AA6 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 THR A 3 ? LYS A 7 ? THR A 142 LYS A 146 AA1 2 SER A 12 ? GLN A 16 ? SER A 151 GLN A 155 AA2 1 GLN A 40 ? TYR A 44 ? GLN A 179 TYR A 183 AA2 2 ARG A 31 ? LEU A 36 ? ARG A 170 LEU A 175 AA2 3 ILE A 20 ? SER A 25 ? ILE A 159 SER A 164 AA2 4 PHE A 64 ? ASN A 67 ? PHE A 203 ASN A 206 AA2 5 PHE A 57 ? HIS A 61 ? PHE A 196 HIS A 200 AA3 1 ILE A 71 ? ASP A 75 ? ILE A 210 ASP A 214 AA3 2 ILE A 80 ? PHE A 83 ? ILE A 219 PHE A 222 AA3 3 HIS A 88 ? TYR A 90 ? HIS A 227 TYR A 229 AA4 1 THR D 3 ? LYS D 7 ? THR D 142 LYS D 146 AA4 2 SER D 12 ? GLN D 16 ? SER D 151 GLN D 155 AA5 1 GLN D 40 ? TYR D 44 ? GLN D 179 TYR D 183 AA5 2 ARG D 31 ? LEU D 36 ? ARG D 170 LEU D 175 AA5 3 ILE D 20 ? SER D 25 ? ILE D 159 SER D 164 AA5 4 PHE D 64 ? ASN D 67 ? PHE D 203 ASN D 206 AA5 5 PHE D 57 ? HIS D 61 ? PHE D 196 HIS D 200 AA6 1 ILE D 71 ? ASP D 75 ? ILE D 210 ASP D 214 AA6 2 ILE D 80 ? PHE D 83 ? ILE D 219 PHE D 222 AA6 3 HIS D 88 ? TYR D 90 ? HIS D 227 TYR D 229 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N LEU A 6 ? N LEU A 145 O VAL A 13 ? O VAL A 152 AA2 1 2 O PHE A 43 ? O PHE A 182 N LEU A 32 ? N LEU A 171 AA2 2 3 O HIS A 35 ? O HIS A 174 N PHE A 22 ? N PHE A 161 AA2 3 4 N PHE A 23 ? N PHE A 162 O VAL A 65 ? O VAL A 204 AA2 4 5 O VAL A 66 ? O VAL A 205 N PHE A 58 ? N PHE A 197 AA3 1 2 N SER A 73 ? N SER A 212 O TYR A 82 ? O TYR A 221 AA3 2 3 N VAL A 81 ? N VAL A 220 O CYS A 89 ? O CYS A 228 AA4 1 2 N LEU D 6 ? N LEU D 145 O VAL D 13 ? O VAL D 152 AA5 1 2 O PHE D 43 ? O PHE D 182 N LEU D 32 ? N LEU D 171 AA5 2 3 O HIS D 35 ? O HIS D 174 N PHE D 22 ? N PHE D 161 AA5 3 4 N PHE D 23 ? N PHE D 162 O VAL D 65 ? O VAL D 204 AA5 4 5 O VAL D 66 ? O VAL D 205 N PHE D 58 ? N PHE D 197 AA6 1 2 N SER D 73 ? N SER D 212 O TYR D 82 ? O TYR D 221 AA6 2 3 N VAL D 81 ? N VAL D 220 O CYS D 89 ? O CYS D 228 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "C5'" C DA 1 ? ? "C4'" C DA 1 ? ? "C3'" C DA 1 ? ? 125.05 115.70 9.35 1.20 N 2 1 "C5'" C DA 1 ? ? "C4'" C DA 1 ? ? "O4'" C DA 1 ? ? 119.94 109.80 10.14 1.10 N 3 1 "C5'" F DA 1 ? ? "C4'" F DA 1 ? ? "C3'" F DA 1 ? ? 124.94 115.70 9.24 1.20 N 4 1 "C5'" F DA 1 ? ? "C4'" F DA 1 ? ? "O4'" F DA 1 ? ? 119.89 109.80 10.09 1.10 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 177 ? ? -146.34 39.40 2 1 ASN D 177 ? ? -145.97 39.26 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DC OP3 O N N 124 DC P P N N 125 DC OP1 O N N 126 DC OP2 O N N 127 DC "O5'" O N N 128 DC "C5'" C N N 129 DC "C4'" C N R 130 DC "O4'" O N N 131 DC "C3'" C N S 132 DC "O3'" O N N 133 DC "C2'" C N N 134 DC "C1'" C N R 135 DC N1 N N N 136 DC C2 C N N 137 DC O2 O N N 138 DC N3 N N N 139 DC C4 C N N 140 DC N4 N N N 141 DC C5 C N N 142 DC C6 C N N 143 DC HOP3 H N N 144 DC HOP2 H N N 145 DC "H5'" H N N 146 DC "H5''" H N N 147 DC "H4'" H N N 148 DC "H3'" H N N 149 DC "HO3'" H N N 150 DC "H2'" H N N 151 DC "H2''" H N N 152 DC "H1'" H N N 153 DC H41 H N N 154 DC H42 H N N 155 DC H5 H N N 156 DC H6 H N N 157 DG OP3 O N N 158 DG P P N N 159 DG OP1 O N N 160 DG OP2 O N N 161 DG "O5'" O N N 162 DG "C5'" C N N 163 DG "C4'" C N R 164 DG "O4'" O N N 165 DG "C3'" C N S 166 DG "O3'" O N N 167 DG "C2'" C N N 168 DG "C1'" C N R 169 DG N9 N Y N 170 DG C8 C Y N 171 DG N7 N Y N 172 DG C5 C Y N 173 DG C6 C N N 174 DG O6 O N N 175 DG N1 N N N 176 DG C2 C N N 177 DG N2 N N N 178 DG N3 N N N 179 DG C4 C Y N 180 DG HOP3 H N N 181 DG HOP2 H N N 182 DG "H5'" H N N 183 DG "H5''" H N N 184 DG "H4'" H N N 185 DG "H3'" H N N 186 DG "HO3'" H N N 187 DG "H2'" H N N 188 DG "H2''" H N N 189 DG "H1'" H N N 190 DG H8 H N N 191 DG H1 H N N 192 DG H21 H N N 193 DG H22 H N N 194 DT OP3 O N N 195 DT P P N N 196 DT OP1 O N N 197 DT OP2 O N N 198 DT "O5'" O N N 199 DT "C5'" C N N 200 DT "C4'" C N R 201 DT "O4'" O N N 202 DT "C3'" C N S 203 DT "O3'" O N N 204 DT "C2'" C N N 205 DT "C1'" C N R 206 DT N1 N N N 207 DT C2 C N N 208 DT O2 O N N 209 DT N3 N N N 210 DT C4 C N N 211 DT O4 O N N 212 DT C5 C N N 213 DT C7 C N N 214 DT C6 C N N 215 DT HOP3 H N N 216 DT HOP2 H N N 217 DT "H5'" H N N 218 DT "H5''" H N N 219 DT "H4'" H N N 220 DT "H3'" H N N 221 DT "HO3'" H N N 222 DT "H2'" H N N 223 DT "H2''" H N N 224 DT "H1'" H N N 225 DT H3 H N N 226 DT H71 H N N 227 DT H72 H N N 228 DT H73 H N N 229 DT H6 H N N 230 GLN N N N N 231 GLN CA C N S 232 GLN C C N N 233 GLN O O N N 234 GLN CB C N N 235 GLN CG C N N 236 GLN CD C N N 237 GLN OE1 O N N 238 GLN NE2 N N N 239 GLN OXT O N N 240 GLN H H N N 241 GLN H2 H N N 242 GLN HA H N N 243 GLN HB2 H N N 244 GLN HB3 H N N 245 GLN HG2 H N N 246 GLN HG3 H N N 247 GLN HE21 H N N 248 GLN HE22 H N N 249 GLN HXT H N N 250 GLU N N N N 251 GLU CA C N S 252 GLU C C N N 253 GLU O O N N 254 GLU CB C N N 255 GLU CG C N N 256 GLU CD C N N 257 GLU OE1 O N N 258 GLU OE2 O N N 259 GLU OXT O N N 260 GLU H H N N 261 GLU H2 H N N 262 GLU HA H N N 263 GLU HB2 H N N 264 GLU HB3 H N N 265 GLU HG2 H N N 266 GLU HG3 H N N 267 GLU HE2 H N N 268 GLU HXT H N N 269 GLY N N N N 270 GLY CA C N N 271 GLY C C N N 272 GLY O O N N 273 GLY OXT O N N 274 GLY H H N N 275 GLY H2 H N N 276 GLY HA2 H N N 277 GLY HA3 H N N 278 GLY HXT H N N 279 HIS N N N N 280 HIS CA C N S 281 HIS C C N N 282 HIS O O N N 283 HIS CB C N N 284 HIS CG C Y N 285 HIS ND1 N Y N 286 HIS CD2 C Y N 287 HIS CE1 C Y N 288 HIS NE2 N Y N 289 HIS OXT O N N 290 HIS H H N N 291 HIS H2 H N N 292 HIS HA H N N 293 HIS HB2 H N N 294 HIS HB3 H N N 295 HIS HD1 H N N 296 HIS HD2 H N N 297 HIS HE1 H N N 298 HIS HE2 H N N 299 HIS HXT H N N 300 ILE N N N N 301 ILE CA C N S 302 ILE C C N N 303 ILE O O N N 304 ILE CB C N S 305 ILE CG1 C N N 306 ILE CG2 C N N 307 ILE CD1 C N N 308 ILE OXT O N N 309 ILE H H N N 310 ILE H2 H N N 311 ILE HA H N N 312 ILE HB H N N 313 ILE HG12 H N N 314 ILE HG13 H N N 315 ILE HG21 H N N 316 ILE HG22 H N N 317 ILE HG23 H N N 318 ILE HD11 H N N 319 ILE HD12 H N N 320 ILE HD13 H N N 321 ILE HXT H N N 322 LEU N N N N 323 LEU CA C N S 324 LEU C C N N 325 LEU O O N N 326 LEU CB C N N 327 LEU CG C N N 328 LEU CD1 C N N 329 LEU CD2 C N N 330 LEU OXT O N N 331 LEU H H N N 332 LEU H2 H N N 333 LEU HA H N N 334 LEU HB2 H N N 335 LEU HB3 H N N 336 LEU HG H N N 337 LEU HD11 H N N 338 LEU HD12 H N N 339 LEU HD13 H N N 340 LEU HD21 H N N 341 LEU HD22 H N N 342 LEU HD23 H N N 343 LEU HXT H N N 344 LYS N N N N 345 LYS CA C N S 346 LYS C C N N 347 LYS O O N N 348 LYS CB C N N 349 LYS CG C N N 350 LYS CD C N N 351 LYS CE C N N 352 LYS NZ N N N 353 LYS OXT O N N 354 LYS H H N N 355 LYS H2 H N N 356 LYS HA H N N 357 LYS HB2 H N N 358 LYS HB3 H N N 359 LYS HG2 H N N 360 LYS HG3 H N N 361 LYS HD2 H N N 362 LYS HD3 H N N 363 LYS HE2 H N N 364 LYS HE3 H N N 365 LYS HZ1 H N N 366 LYS HZ2 H N N 367 LYS HZ3 H N N 368 LYS HXT H N N 369 MET N N N N 370 MET CA C N S 371 MET C C N N 372 MET O O N N 373 MET CB C N N 374 MET CG C N N 375 MET SD S N N 376 MET CE C N N 377 MET OXT O N N 378 MET H H N N 379 MET H2 H N N 380 MET HA H N N 381 MET HB2 H N N 382 MET HB3 H N N 383 MET HG2 H N N 384 MET HG3 H N N 385 MET HE1 H N N 386 MET HE2 H N N 387 MET HE3 H N N 388 MET HXT H N N 389 PHE N N N N 390 PHE CA C N S 391 PHE C C N N 392 PHE O O N N 393 PHE CB C N N 394 PHE CG C Y N 395 PHE CD1 C Y N 396 PHE CD2 C Y N 397 PHE CE1 C Y N 398 PHE CE2 C Y N 399 PHE CZ C Y N 400 PHE OXT O N N 401 PHE H H N N 402 PHE H2 H N N 403 PHE HA H N N 404 PHE HB2 H N N 405 PHE HB3 H N N 406 PHE HD1 H N N 407 PHE HD2 H N N 408 PHE HE1 H N N 409 PHE HE2 H N N 410 PHE HZ H N N 411 PHE HXT H N N 412 SER N N N N 413 SER CA C N S 414 SER C C N N 415 SER O O N N 416 SER CB C N N 417 SER OG O N N 418 SER OXT O N N 419 SER H H N N 420 SER H2 H N N 421 SER HA H N N 422 SER HB2 H N N 423 SER HB3 H N N 424 SER HG H N N 425 SER HXT H N N 426 THR N N N N 427 THR CA C N S 428 THR C C N N 429 THR O O N N 430 THR CB C N R 431 THR OG1 O N N 432 THR CG2 C N N 433 THR OXT O N N 434 THR H H N N 435 THR H2 H N N 436 THR HA H N N 437 THR HB H N N 438 THR HG1 H N N 439 THR HG21 H N N 440 THR HG22 H N N 441 THR HG23 H N N 442 THR HXT H N N 443 TYR N N N N 444 TYR CA C N S 445 TYR C C N N 446 TYR O O N N 447 TYR CB C N N 448 TYR CG C Y N 449 TYR CD1 C Y N 450 TYR CD2 C Y N 451 TYR CE1 C Y N 452 TYR CE2 C Y N 453 TYR CZ C Y N 454 TYR OH O N N 455 TYR OXT O N N 456 TYR H H N N 457 TYR H2 H N N 458 TYR HA H N N 459 TYR HB2 H N N 460 TYR HB3 H N N 461 TYR HD1 H N N 462 TYR HD2 H N N 463 TYR HE1 H N N 464 TYR HE2 H N N 465 TYR HH H N N 466 TYR HXT H N N 467 VAL N N N N 468 VAL CA C N S 469 VAL C C N N 470 VAL O O N N 471 VAL CB C N N 472 VAL CG1 C N N 473 VAL CG2 C N N 474 VAL OXT O N N 475 VAL H H N N 476 VAL H2 H N N 477 VAL HA H N N 478 VAL HB H N N 479 VAL HG11 H N N 480 VAL HG12 H N N 481 VAL HG13 H N N 482 VAL HG21 H N N 483 VAL HG22 H N N 484 VAL HG23 H N N 485 VAL HXT H N N 486 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 GLN N CA sing N N 232 GLN N H sing N N 233 GLN N H2 sing N N 234 GLN CA C sing N N 235 GLN CA CB sing N N 236 GLN CA HA sing N N 237 GLN C O doub N N 238 GLN C OXT sing N N 239 GLN CB CG sing N N 240 GLN CB HB2 sing N N 241 GLN CB HB3 sing N N 242 GLN CG CD sing N N 243 GLN CG HG2 sing N N 244 GLN CG HG3 sing N N 245 GLN CD OE1 doub N N 246 GLN CD NE2 sing N N 247 GLN NE2 HE21 sing N N 248 GLN NE2 HE22 sing N N 249 GLN OXT HXT sing N N 250 GLU N CA sing N N 251 GLU N H sing N N 252 GLU N H2 sing N N 253 GLU CA C sing N N 254 GLU CA CB sing N N 255 GLU CA HA sing N N 256 GLU C O doub N N 257 GLU C OXT sing N N 258 GLU CB CG sing N N 259 GLU CB HB2 sing N N 260 GLU CB HB3 sing N N 261 GLU CG CD sing N N 262 GLU CG HG2 sing N N 263 GLU CG HG3 sing N N 264 GLU CD OE1 doub N N 265 GLU CD OE2 sing N N 266 GLU OE2 HE2 sing N N 267 GLU OXT HXT sing N N 268 GLY N CA sing N N 269 GLY N H sing N N 270 GLY N H2 sing N N 271 GLY CA C sing N N 272 GLY CA HA2 sing N N 273 GLY CA HA3 sing N N 274 GLY C O doub N N 275 GLY C OXT sing N N 276 GLY OXT HXT sing N N 277 HIS N CA sing N N 278 HIS N H sing N N 279 HIS N H2 sing N N 280 HIS CA C sing N N 281 HIS CA CB sing N N 282 HIS CA HA sing N N 283 HIS C O doub N N 284 HIS C OXT sing N N 285 HIS CB CG sing N N 286 HIS CB HB2 sing N N 287 HIS CB HB3 sing N N 288 HIS CG ND1 sing Y N 289 HIS CG CD2 doub Y N 290 HIS ND1 CE1 doub Y N 291 HIS ND1 HD1 sing N N 292 HIS CD2 NE2 sing Y N 293 HIS CD2 HD2 sing N N 294 HIS CE1 NE2 sing Y N 295 HIS CE1 HE1 sing N N 296 HIS NE2 HE2 sing N N 297 HIS OXT HXT sing N N 298 ILE N CA sing N N 299 ILE N H sing N N 300 ILE N H2 sing N N 301 ILE CA C sing N N 302 ILE CA CB sing N N 303 ILE CA HA sing N N 304 ILE C O doub N N 305 ILE C OXT sing N N 306 ILE CB CG1 sing N N 307 ILE CB CG2 sing N N 308 ILE CB HB sing N N 309 ILE CG1 CD1 sing N N 310 ILE CG1 HG12 sing N N 311 ILE CG1 HG13 sing N N 312 ILE CG2 HG21 sing N N 313 ILE CG2 HG22 sing N N 314 ILE CG2 HG23 sing N N 315 ILE CD1 HD11 sing N N 316 ILE CD1 HD12 sing N N 317 ILE CD1 HD13 sing N N 318 ILE OXT HXT sing N N 319 LEU N CA sing N N 320 LEU N H sing N N 321 LEU N H2 sing N N 322 LEU CA C sing N N 323 LEU CA CB sing N N 324 LEU CA HA sing N N 325 LEU C O doub N N 326 LEU C OXT sing N N 327 LEU CB CG sing N N 328 LEU CB HB2 sing N N 329 LEU CB HB3 sing N N 330 LEU CG CD1 sing N N 331 LEU CG CD2 sing N N 332 LEU CG HG sing N N 333 LEU CD1 HD11 sing N N 334 LEU CD1 HD12 sing N N 335 LEU CD1 HD13 sing N N 336 LEU CD2 HD21 sing N N 337 LEU CD2 HD22 sing N N 338 LEU CD2 HD23 sing N N 339 LEU OXT HXT sing N N 340 LYS N CA sing N N 341 LYS N H sing N N 342 LYS N H2 sing N N 343 LYS CA C sing N N 344 LYS CA CB sing N N 345 LYS CA HA sing N N 346 LYS C O doub N N 347 LYS C OXT sing N N 348 LYS CB CG sing N N 349 LYS CB HB2 sing N N 350 LYS CB HB3 sing N N 351 LYS CG CD sing N N 352 LYS CG HG2 sing N N 353 LYS CG HG3 sing N N 354 LYS CD CE sing N N 355 LYS CD HD2 sing N N 356 LYS CD HD3 sing N N 357 LYS CE NZ sing N N 358 LYS CE HE2 sing N N 359 LYS CE HE3 sing N N 360 LYS NZ HZ1 sing N N 361 LYS NZ HZ2 sing N N 362 LYS NZ HZ3 sing N N 363 LYS OXT HXT sing N N 364 MET N CA sing N N 365 MET N H sing N N 366 MET N H2 sing N N 367 MET CA C sing N N 368 MET CA CB sing N N 369 MET CA HA sing N N 370 MET C O doub N N 371 MET C OXT sing N N 372 MET CB CG sing N N 373 MET CB HB2 sing N N 374 MET CB HB3 sing N N 375 MET CG SD sing N N 376 MET CG HG2 sing N N 377 MET CG HG3 sing N N 378 MET SD CE sing N N 379 MET CE HE1 sing N N 380 MET CE HE2 sing N N 381 MET CE HE3 sing N N 382 MET OXT HXT sing N N 383 PHE N CA sing N N 384 PHE N H sing N N 385 PHE N H2 sing N N 386 PHE CA C sing N N 387 PHE CA CB sing N N 388 PHE CA HA sing N N 389 PHE C O doub N N 390 PHE C OXT sing N N 391 PHE CB CG sing N N 392 PHE CB HB2 sing N N 393 PHE CB HB3 sing N N 394 PHE CG CD1 doub Y N 395 PHE CG CD2 sing Y N 396 PHE CD1 CE1 sing Y N 397 PHE CD1 HD1 sing N N 398 PHE CD2 CE2 doub Y N 399 PHE CD2 HD2 sing N N 400 PHE CE1 CZ doub Y N 401 PHE CE1 HE1 sing N N 402 PHE CE2 CZ sing Y N 403 PHE CE2 HE2 sing N N 404 PHE CZ HZ sing N N 405 PHE OXT HXT sing N N 406 SER N CA sing N N 407 SER N H sing N N 408 SER N H2 sing N N 409 SER CA C sing N N 410 SER CA CB sing N N 411 SER CA HA sing N N 412 SER C O doub N N 413 SER C OXT sing N N 414 SER CB OG sing N N 415 SER CB HB2 sing N N 416 SER CB HB3 sing N N 417 SER OG HG sing N N 418 SER OXT HXT sing N N 419 THR N CA sing N N 420 THR N H sing N N 421 THR N H2 sing N N 422 THR CA C sing N N 423 THR CA CB sing N N 424 THR CA HA sing N N 425 THR C O doub N N 426 THR C OXT sing N N 427 THR CB OG1 sing N N 428 THR CB CG2 sing N N 429 THR CB HB sing N N 430 THR OG1 HG1 sing N N 431 THR CG2 HG21 sing N N 432 THR CG2 HG22 sing N N 433 THR CG2 HG23 sing N N 434 THR OXT HXT sing N N 435 TYR N CA sing N N 436 TYR N H sing N N 437 TYR N H2 sing N N 438 TYR CA C sing N N 439 TYR CA CB sing N N 440 TYR CA HA sing N N 441 TYR C O doub N N 442 TYR C OXT sing N N 443 TYR CB CG sing N N 444 TYR CB HB2 sing N N 445 TYR CB HB3 sing N N 446 TYR CG CD1 doub Y N 447 TYR CG CD2 sing Y N 448 TYR CD1 CE1 sing Y N 449 TYR CD1 HD1 sing N N 450 TYR CD2 CE2 doub Y N 451 TYR CD2 HD2 sing N N 452 TYR CE1 CZ doub Y N 453 TYR CE1 HE1 sing N N 454 TYR CE2 CZ sing Y N 455 TYR CE2 HE2 sing N N 456 TYR CZ OH sing N N 457 TYR OH HH sing N N 458 TYR OXT HXT sing N N 459 VAL N CA sing N N 460 VAL N H sing N N 461 VAL N H2 sing N N 462 VAL CA C sing N N 463 VAL CA CB sing N N 464 VAL CA HA sing N N 465 VAL C O doub N N 466 VAL C OXT sing N N 467 VAL CB CG1 sing N N 468 VAL CB CG2 sing N N 469 VAL CB HB sing N N 470 VAL CG1 HG11 sing N N 471 VAL CG1 HG12 sing N N 472 VAL CG1 HG13 sing N N 473 VAL CG2 HG21 sing N N 474 VAL CG2 HG22 sing N N 475 VAL CG2 HG23 sing N N 476 VAL OXT HXT sing N N 477 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 4XXE 'double helix' 4XXE 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DT 1 1_555 C DA 14 1_555 -1.024 -0.141 -1.255 4.532 -3.323 -19.640 1 B_DT4:DA14_C B 4 ? C 14 ? 20 1 1 B DA 2 1_555 C DT 13 1_555 0.527 0.107 -1.119 5.803 -10.421 -16.383 2 B_DA5:DT13_C B 5 ? C 13 ? 20 1 1 B DC 3 1_555 C DG 12 1_555 0.827 -0.232 -0.853 3.090 -11.740 -11.847 3 B_DC6:DG12_C B 6 ? C 12 ? ? 1 1 B DG 5 1_555 C DC 10 1_555 0.343 0.058 0.131 -0.632 -24.156 -2.444 4 B_DG8:DC10_C B 8 ? C 10 ? 19 1 1 B DT 6 1_555 C DA 9 1_555 0.449 -0.374 0.269 -14.395 -9.965 0.879 5 B_DT9:DA9_C B 9 ? C 9 ? 20 1 1 B DT 7 1_555 C DA 8 1_555 0.099 -0.122 0.535 -9.456 -14.212 7.103 6 B_DT10:DA8_C B 10 ? C 8 ? 20 1 1 B DA 8 1_555 C DT 7 1_555 -0.603 0.151 0.613 -2.302 -9.811 5.539 7 B_DA11:DT7_C B 11 ? C 7 ? ? ? 1 B DG 9 1_555 C DC 6 1_555 -0.410 0.154 0.842 10.905 -12.146 7.055 8 B_DG12:DC6_C B 12 ? C 6 ? ? 1 1 B DG 10 1_555 C DC 5 1_555 -0.230 -0.093 0.449 1.875 -14.966 -1.491 9 B_DG13:DC5_C B 13 ? C 5 ? 19 1 1 B DC 11 1_555 C DG 4 1_555 0.631 -0.178 0.556 1.074 -14.520 -2.042 10 B_DC14:DG4_C B 14 ? C 4 ? 19 1 1 B DA 12 1_555 C DT 3 1_555 0.242 0.088 0.928 9.275 -15.298 5.787 11 B_DA15:DT3_C B 15 ? C 3 ? ? ? 1 B DA 13 1_555 C DT 2 1_555 0.408 0.120 0.428 17.038 -8.977 20.002 12 B_DA16:DT2_C B 16 ? C 2 ? ? 1 1 E DT 1 1_555 F DA 14 1_555 -1.657 0.149 -1.112 0.565 0.014 -26.092 13 E_DT4:DA14_F E 4 ? F 14 ? ? ? 1 E DA 2 1_555 F DT 13 1_555 0.479 0.284 -1.057 7.259 -9.078 -15.828 14 E_DA5:DT13_F E 5 ? F 13 ? ? ? 1 E DC 3 1_555 F DG 12 1_555 0.926 -0.229 -0.815 5.367 -11.607 -10.605 15 E_DC6:DG12_F E 6 ? F 12 ? ? 1 1 E DA 4 1_555 F DT 11 1_555 0.290 0.560 0.180 17.566 -25.711 5.566 16 E_DA7:DT11_F E 7 ? F 11 ? ? ? 1 E DG 5 1_555 F DC 10 1_555 0.061 0.055 0.220 0.831 -24.937 -1.853 17 E_DG8:DC10_F E 8 ? F 10 ? 19 1 1 E DT 6 1_555 F DA 9 1_555 0.427 -0.277 0.337 -13.001 -11.468 0.463 18 E_DT9:DA9_F E 9 ? F 9 ? 20 1 1 E DT 7 1_555 F DA 8 1_555 0.309 -0.036 0.581 -8.038 -14.823 5.831 19 E_DT10:DA8_F E 10 ? F 8 ? 20 1 1 E DA 8 1_555 F DT 7 1_555 -0.407 0.013 0.579 -2.155 -9.610 4.001 20 E_DA11:DT7_F E 11 ? F 7 ? 20 1 1 E DG 9 1_555 F DC 6 1_555 -0.348 0.051 0.772 11.697 -12.330 6.570 21 E_DG12:DC6_F E 12 ? F 6 ? 19 1 1 E DG 10 1_555 F DC 5 1_555 -0.216 -0.171 0.316 1.790 -14.994 -0.990 22 E_DG13:DC5_F E 13 ? F 5 ? 19 1 1 E DC 11 1_555 F DG 4 1_555 0.795 -0.296 0.379 1.897 -14.469 -0.848 23 E_DC14:DG4_F E 14 ? F 4 ? 19 1 1 E DA 12 1_555 F DT 3 1_555 0.364 -0.041 0.795 9.268 -14.784 6.780 24 E_DA15:DT3_F E 15 ? F 3 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DT 1 1_555 C DA 14 1_555 B DA 2 1_555 C DT 13 1_555 0.212 0.541 3.696 0.069 8.042 41.795 -0.186 -0.285 3.733 11.148 -0.095 42.528 1 BB_DT4DA5:DT13DA14_CC B 4 ? C 14 ? B 5 ? C 13 ? 1 B DA 2 1_555 C DT 13 1_555 B DC 3 1_555 C DG 12 1_555 -0.054 -0.422 3.530 -2.688 4.807 36.493 -1.364 -0.304 3.443 7.623 4.263 36.893 2 BB_DA5DC6:DG12DT13_CC B 5 ? C 13 ? B 6 ? C 12 ? 1 B DC 3 1_555 C DG 12 1_555 B DG 5 1_555 C DC 10 1_555 0.942 -0.190 6.821 -7.973 12.231 69.390 -1.047 -1.390 6.588 10.625 6.926 70.720 3 BB_DC6DG8:DC10DG12_CC B 6 ? C 12 ? B 8 ? C 10 ? 1 B DG 5 1_555 C DC 10 1_555 B DT 6 1_555 C DA 9 1_555 -0.354 -0.707 3.762 -0.927 -8.129 37.962 0.101 0.400 3.835 -12.321 1.405 38.802 4 BB_DG8DT9:DA9DC10_CC B 8 ? C 10 ? B 9 ? C 9 ? 1 B DT 6 1_555 C DA 9 1_555 B DT 7 1_555 C DA 8 1_555 0.115 -0.478 3.193 1.112 -0.955 32.580 -0.688 -0.016 3.208 -1.702 -1.981 32.612 5 BB_DT9DT10:DA8DA9_CC B 9 ? C 9 ? B 10 ? C 8 ? 1 B DT 7 1_555 C DA 8 1_555 B DA 8 1_555 C DT 7 1_555 -0.334 2.233 3.197 -0.226 -8.043 45.391 3.491 0.409 2.785 -10.327 0.291 46.061 6 BB_DT10DA11:DT7DA8_CC B 10 ? C 8 ? B 11 ? C 7 ? 1 B DA 8 1_555 C DT 7 1_555 B DG 9 1_555 C DC 6 1_555 0.582 0.573 3.098 -3.557 7.632 28.326 -0.433 -1.868 3.051 15.176 7.073 29.526 7 BB_DA11DG12:DC6DT7_CC B 11 ? C 7 ? B 12 ? C 6 ? 1 B DG 9 1_555 C DC 6 1_555 B DG 10 1_555 C DC 5 1_555 -1.443 0.198 3.413 -3.079 2.558 42.663 0.001 1.650 3.510 3.506 4.221 42.842 8 BB_DG12DG13:DC5DC6_CC B 12 ? C 6 ? B 13 ? C 5 ? 1 B DG 10 1_555 C DC 5 1_555 B DC 11 1_555 C DG 4 1_555 0.126 0.052 3.438 0.033 3.486 39.467 -0.352 -0.182 3.430 5.150 -0.049 39.615 9 BB_DG13DC14:DG4DC5_CC B 13 ? C 5 ? B 14 ? C 4 ? 1 B DC 11 1_555 C DG 4 1_555 B DA 12 1_555 C DT 3 1_555 0.628 -0.339 3.195 -3.387 4.285 30.033 -1.461 -1.840 3.031 8.184 6.469 30.514 10 BB_DC14DA15:DT3DG4_CC B 14 ? C 4 ? B 15 ? C 3 ? 1 B DA 12 1_555 C DT 3 1_555 B DA 13 1_555 C DT 2 1_555 0.612 -0.469 3.142 5.061 4.889 30.674 -1.749 -0.216 3.091 9.093 -9.411 31.452 11 BB_DA15DA16:DT2DT3_CC B 15 ? C 3 ? B 16 ? C 2 ? 1 E DT 1 1_555 F DA 14 1_555 E DA 2 1_555 F DT 13 1_555 0.291 0.430 3.523 0.676 6.394 45.773 -0.045 -0.309 3.552 8.173 -0.864 46.198 12 EE_DT4DA5:DT13DA14_FF E 4 ? F 14 ? E 5 ? F 13 ? 1 E DA 2 1_555 F DT 13 1_555 E DC 3 1_555 F DG 12 1_555 -0.042 -0.428 3.500 -2.916 5.375 36.679 -1.432 -0.347 3.399 8.469 4.594 37.168 13 EE_DA5DC6:DG12DT13_FF E 5 ? F 13 ? E 6 ? F 12 ? 1 E DC 3 1_555 F DG 12 1_555 E DA 4 1_555 F DT 11 1_555 0.259 0.758 3.181 -5.146 9.134 31.766 -0.195 -1.303 3.192 16.146 9.096 33.409 14 EE_DC6DA7:DT11DG12_FF E 6 ? F 12 ? E 7 ? F 11 ? 1 E DA 4 1_555 F DT 11 1_555 E DG 5 1_555 F DC 10 1_555 -0.091 -0.796 3.587 -5.371 4.734 36.207 -1.954 -0.644 3.438 7.527 8.540 36.885 15 EE_DA7DG8:DC10DT11_FF E 7 ? F 11 ? E 8 ? F 10 ? 1 E DG 5 1_555 F DC 10 1_555 E DT 6 1_555 F DA 9 1_555 -0.450 -0.682 3.734 -0.996 -7.901 38.726 0.073 0.529 3.805 -11.764 1.483 39.505 16 EE_DG8DT9:DA9DC10_FF E 8 ? F 10 ? E 9 ? F 9 ? 1 E DT 6 1_555 F DA 9 1_555 E DT 7 1_555 F DA 8 1_555 0.018 -0.484 3.161 1.151 -1.707 33.261 -0.569 0.155 3.180 -2.979 -2.008 33.322 17 EE_DT9DT10:DA8DA9_FF E 9 ? F 9 ? E 10 ? F 8 ? 1 E DT 7 1_555 F DA 8 1_555 E DA 8 1_555 F DT 7 1_555 -0.356 2.258 3.185 0.010 -7.341 45.127 3.499 0.459 2.804 -9.491 -0.013 45.690 18 EE_DT10DA11:DT7DA8_FF E 10 ? F 8 ? E 11 ? F 7 ? 1 E DA 8 1_555 F DT 7 1_555 E DG 9 1_555 F DC 6 1_555 0.624 0.631 3.069 -3.258 7.491 28.229 -0.291 -1.899 3.043 14.967 6.510 29.364 19 EE_DA11DG12:DC6DT7_FF E 11 ? F 7 ? E 12 ? F 6 ? 1 E DG 9 1_555 F DC 6 1_555 E DG 10 1_555 F DC 5 1_555 -1.368 0.237 3.425 -2.932 3.313 42.756 -0.026 1.559 3.514 4.530 4.009 42.974 20 EE_DG12DG13:DC5DC6_FF E 12 ? F 6 ? E 13 ? F 5 ? 1 E DG 10 1_555 F DC 5 1_555 E DC 11 1_555 F DG 4 1_555 0.183 0.062 3.409 0.204 3.639 40.203 -0.337 -0.242 3.403 5.281 -0.296 40.361 21 EE_DG13DC14:DG4DC5_FF E 13 ? F 5 ? E 14 ? F 4 ? 1 E DC 11 1_555 F DG 4 1_555 E DA 12 1_555 F DT 3 1_555 0.603 -0.387 3.208 -3.609 4.518 30.016 -1.596 -1.832 3.028 8.623 6.888 30.556 22 EE_DC14DA15:DT3DG4_FF E 14 ? F 4 ? E 15 ? F 3 ? # _atom_sites.entry_id 4XXE _atom_sites.fract_transf_matrix[1][1] 0.010335 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010335 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.019566 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_