HEADER HYDROLASE/HYDROLASE INHIBITOR 06-FEB-15 4Y10 TITLE TRYPSIN IN COMPLEX WITH WITH BPTI MUTANT (2S)-2-AMINO-4,4- TITLE 2 DIFLUOROBUTANOIC ACID COMPND MOL_ID: 1; COMPND 2 MOLECULE: CATIONIC TRYPSIN; COMPND 3 CHAIN: E; COMPND 4 SYNONYM: BETA-TRYPSIN, TRYPSIN; COMPND 5 EC: 3.4.21.4; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: PANCREATIC TRYPSIN INHIBITOR; COMPND 8 CHAIN: I; COMPND 9 FRAGMENT: UNP RESIDUES 36-93; COMPND 10 SYNONYM: APROTININ,BASIC PROTEASE INHIBITOR,BPTI; COMPND 11 ENGINEERED: YES; COMPND 12 OTHER_DETAILS: NON-CANONICAL AMINO ACID INCORPORATED (OBF) SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BOS TAURUS; SOURCE 3 ORGANISM_COMMON: CATTLE; SOURCE 4 ORGANISM_TAXID: 9913; SOURCE 5 MOL_ID: 2; SOURCE 6 SYNTHETIC: YES; SOURCE 7 ORGANISM_SCIENTIFIC: BOS TAURUS; SOURCE 8 ORGANISM_COMMON: CATTLE; SOURCE 9 ORGANISM_TAXID: 9913 KEYWDS HYDROLASE INHIBITORS, DIGESTION, METAL-BINDING, PROTEASE, SECRETED, KEYWDS 2 SERINE PROTEASE, ZYMOGEN, HYDROLASE-HYDROLASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR B.LOLL,S.YE,A.A.BERGER,U.MUELOW,C.ALINGS,M.C.WAHL,B.KOKSCH REVDAT 4 15-NOV-23 4Y10 1 LINK ATOM REVDAT 3 18-APR-18 4Y10 1 JRNL REMARK LINK SITE REVDAT 3 2 1 ATOM REVDAT 2 26-AUG-15 4Y10 1 JRNL REVDAT 1 24-JUN-15 4Y10 0 JRNL AUTH S.YE,B.LOLL,A.A.BERGER,U.MULOW,C.ALINGS,M.C.WAHL,B.KOKSCH JRNL TITL FLUORINE TEAMS UP WITH WATER TO RESTORE INHIBITOR ACTIVITY JRNL TITL 2 TO MUTANT BPTI. JRNL REF CHEM SCI V. 6 5246 2015 JRNL REFN ISSN 2041-6520 JRNL PMID 29449928 JRNL DOI 10.1039/C4SC03227F REMARK 2 REMARK 2 RESOLUTION. 1.37 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.9_1692) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.37 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.12 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 79833 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.139 REMARK 3 R VALUE (WORKING SET) : 0.138 REMARK 3 FREE R VALUE : 0.165 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3992 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 34.1344 - 4.1971 0.99 2788 148 0.1541 0.1849 REMARK 3 2 4.1971 - 3.3323 1.00 2690 141 0.1229 0.1254 REMARK 3 3 3.3323 - 2.9113 1.00 2672 141 0.1385 0.1803 REMARK 3 4 2.9113 - 2.6452 1.00 2652 139 0.1436 0.1726 REMARK 3 5 2.6452 - 2.4557 1.00 2642 139 0.1322 0.1379 REMARK 3 6 2.4557 - 2.3109 1.00 2626 139 0.1292 0.1479 REMARK 3 7 2.3109 - 2.1952 1.00 2626 138 0.1236 0.1418 REMARK 3 8 2.1952 - 2.0997 1.00 2625 138 0.1222 0.1633 REMARK 3 9 2.0997 - 2.0189 1.00 2611 137 0.1242 0.1626 REMARK 3 10 2.0189 - 1.9492 1.00 2611 138 0.1244 0.1600 REMARK 3 11 1.9492 - 1.8883 1.00 2629 138 0.1262 0.1445 REMARK 3 12 1.8883 - 1.8343 0.99 2613 138 0.1251 0.1617 REMARK 3 13 1.8343 - 1.7860 1.00 2600 137 0.1235 0.1768 REMARK 3 14 1.7860 - 1.7424 1.00 2603 136 0.1262 0.1432 REMARK 3 15 1.7424 - 1.7028 1.00 2613 138 0.1251 0.1537 REMARK 3 16 1.7028 - 1.6666 1.00 2603 137 0.1238 0.1517 REMARK 3 17 1.6666 - 1.6332 1.00 2592 136 0.1279 0.1688 REMARK 3 18 1.6332 - 1.6024 1.00 2623 139 0.1342 0.1750 REMARK 3 19 1.6024 - 1.5738 1.00 2615 137 0.1367 0.1528 REMARK 3 20 1.5738 - 1.5471 1.00 2579 136 0.1496 0.2038 REMARK 3 21 1.5471 - 1.5222 1.00 2615 137 0.1516 0.1723 REMARK 3 22 1.5222 - 1.4988 1.00 2594 137 0.1522 0.1839 REMARK 3 23 1.4988 - 1.4767 1.00 2590 136 0.1618 0.1884 REMARK 3 24 1.4767 - 1.4559 1.00 2578 136 0.1716 0.2244 REMARK 3 25 1.4559 - 1.4362 1.00 2612 138 0.1782 0.2521 REMARK 3 26 1.4362 - 1.4176 1.00 2620 137 0.2010 0.2631 REMARK 3 27 1.4176 - 1.3999 1.00 2594 137 0.2144 0.2656 REMARK 3 28 1.3999 - 1.3830 1.00 2554 134 0.2245 0.2556 REMARK 3 29 1.3830 - 1.3669 0.94 2471 130 0.2514 0.2658 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.120 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 16.070 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.019 2330 REMARK 3 ANGLE : 1.691 3177 REMARK 3 CHIRALITY : 0.100 343 REMARK 3 PLANARITY : 0.011 408 REMARK 3 DIHEDRAL : 11.950 864 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4Y10 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 06-FEB-15. REMARK 100 THE DEPOSITION ID IS D_1000206597. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-JUL-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91841 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-225 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 79871 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.370 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 8.000 REMARK 200 R MERGE (I) : 0.06800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.37 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.48 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.6 REMARK 200 DATA REDUNDANCY IN SHELL : 8.00 REMARK 200 R MERGE FOR SHELL (I) : 0.94000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.14 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.17 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.8 TO 2.2 M AMMONIUM SULFATE, VAPOR REMARK 280 DIFFUSION, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 37.34700 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 40.92700 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 61.80600 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 37.34700 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 40.92700 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 61.80600 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 37.34700 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 40.92700 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 61.80600 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 37.34700 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 40.92700 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 61.80600 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3230 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11790 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -128.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, I REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG I 1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HZ1 LYS E 107 O4 SO4 E 303 1.54 REMARK 500 O HOH I 204 O HOH I 223 2.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 HH TYR I 21 HH TYR I 21 4559 1.28 REMARK 500 HD22 ASN E 221 HZ2 LYS E 237 8459 1.35 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 VAL E 75 C VAL E 75 O -0.200 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 VAL E 75 CA - C - N ANGL. DEV. = -15.4 DEGREES REMARK 500 ARG E 117 NE - CZ - NH2 ANGL. DEV. = -3.6 DEGREES REMARK 500 ASP E 191 CB - CG - OD1 ANGL. DEV. = 5.5 DEGREES REMARK 500 ARG I 53 NE - CZ - NH2 ANGL. DEV. = -3.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP E 71 -75.71 -122.28 REMARK 500 SER E 212 -71.15 -122.45 REMARK 500 ASN I 44 109.86 -160.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 VAL E 75 -13.53 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA E 308 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU E 70 OE2 REMARK 620 2 ASN E 72 O 89.7 REMARK 620 3 VAL E 75 O 166.2 83.4 REMARK 620 4 GLU E 80 OE2 101.3 164.0 88.0 REMARK 620 5 HOH E 408 O 82.8 88.8 109.0 81.2 REMARK 620 6 HOH E 476 O 79.1 101.7 90.5 91.9 158.9 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 E 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 E 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 E 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 E 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 E 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 E 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL E 307 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA E 308 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 I 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 I 102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 I 103 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4Y0Y RELATED DB: PDB REMARK 900 RELATED ID: 4Y0Z RELATED DB: PDB REMARK 900 RELATED ID: 4Y11 RELATED DB: PDB DBREF 4Y10 E 16 243 UNP P00760 TRY1_BOVIN 24 246 DBREF 4Y10 I 1 58 UNP P00974 BPT1_BOVIN 36 93 SEQADV 4Y10 OBF I 15 UNP P00974 LYS 50 ENGINEERED MUTATION SEQRES 1 E 223 ILE VAL GLY GLY TYR THR CYS GLY ALA ASN THR VAL PRO SEQRES 2 E 223 TYR GLN VAL SER LEU ASN SER GLY TYR HIS PHE CYS GLY SEQRES 3 E 223 GLY SER LEU ILE ASN SER GLN TRP VAL VAL SER ALA ALA SEQRES 4 E 223 HIS CYS TYR LYS SER GLY ILE GLN VAL ARG LEU GLY GLU SEQRES 5 E 223 ASP ASN ILE ASN VAL VAL GLU GLY ASN GLU GLN PHE ILE SEQRES 6 E 223 SER ALA SER LYS SER ILE VAL HIS PRO SER TYR ASN SER SEQRES 7 E 223 ASN THR LEU ASN ASN ASP ILE MET LEU ILE LYS LEU LYS SEQRES 8 E 223 SER ALA ALA SER LEU ASN SER ARG VAL ALA SER ILE SER SEQRES 9 E 223 LEU PRO THR SER CYS ALA SER ALA GLY THR GLN CYS LEU SEQRES 10 E 223 ILE SER GLY TRP GLY ASN THR LYS SER SER GLY THR SER SEQRES 11 E 223 TYR PRO ASP VAL LEU LYS CYS LEU LYS ALA PRO ILE LEU SEQRES 12 E 223 SER ASP SER SER CYS LYS SER ALA TYR PRO GLY GLN ILE SEQRES 13 E 223 THR SER ASN MET PHE CYS ALA GLY TYR LEU GLU GLY GLY SEQRES 14 E 223 LYS ASP SER CYS GLN GLY ASP SER GLY GLY PRO VAL VAL SEQRES 15 E 223 CYS SER GLY LYS LEU GLN GLY ILE VAL SER TRP GLY SER SEQRES 16 E 223 GLY CYS ALA GLN LYS ASN LYS PRO GLY VAL TYR THR LYS SEQRES 17 E 223 VAL CYS ASN TYR VAL SER TRP ILE LYS GLN THR ILE ALA SEQRES 18 E 223 SER ASN SEQRES 1 I 58 ARG PRO ASP PHE CYS LEU GLU PRO PRO TYR THR GLY PRO SEQRES 2 I 58 CYS OBF ALA ARG ILE ILE ARG TYR PHE TYR ASN ALA LYS SEQRES 3 I 58 ALA GLY LEU CYS GLN THR PHE VAL TYR GLY GLY CYS ARG SEQRES 4 I 58 ALA LYS ARG ASN ASN PHE LYS SER ALA GLU ASP CYS MET SEQRES 5 I 58 ARG THR CYS GLY GLY ALA HET OBF I 15 13 HET SO4 E 301 5 HET SO4 E 302 5 HET SO4 E 303 5 HET SO4 E 304 5 HET SO4 E 305 5 HET SO4 E 306 5 HET GOL E 307 14 HET CA E 308 1 HET SO4 I 101 5 HET SO4 I 102 5 HET SO4 I 103 5 HETNAM OBF (2S)-2-AMINO-4,4-DIFLUOROBUTANOIC ACID HETNAM SO4 SULFATE ION HETNAM GOL GLYCEROL HETNAM CA CALCIUM ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 OBF C4 H7 F2 N O2 FORMUL 3 SO4 9(O4 S 2-) FORMUL 9 GOL C3 H8 O3 FORMUL 10 CA CA 2+ FORMUL 14 HOH *346(H2 O) HELIX 1 AA1 ALA E 55 TYR E 59 5 5 HELIX 2 AA2 SER E 164 TYR E 172 1 9 HELIX 3 AA3 TYR E 232 SER E 242 1 11 HELIX 4 AA4 ASP I 3 GLU I 7 5 5 HELIX 5 AA5 SER I 47 GLY I 56 1 10 SHEET 1 AA1 7 TYR E 20 THR E 21 0 SHEET 2 AA1 7 LYS E 156 PRO E 161 -1 O CYS E 157 N TYR E 20 SHEET 3 AA1 7 GLN E 135 GLY E 140 -1 N ILE E 138 O LEU E 158 SHEET 4 AA1 7 PRO E 200 CYS E 203 -1 O VAL E 202 N LEU E 137 SHEET 5 AA1 7 LYS E 206 TRP E 213 -1 O LYS E 206 N CYS E 203 SHEET 6 AA1 7 GLY E 224 LYS E 228 -1 O VAL E 225 N TRP E 213 SHEET 7 AA1 7 MET E 180 ALA E 183 -1 N PHE E 181 O TYR E 226 SHEET 1 AA2 7 GLN E 30 ASN E 34 0 SHEET 2 AA2 7 HIS E 40 ASN E 48 -1 O CYS E 42 N LEU E 33 SHEET 3 AA2 7 TRP E 51 SER E 54 -1 O TRP E 51 N ILE E 47 SHEET 4 AA2 7 MET E 104 LEU E 108 -1 O ILE E 106 N VAL E 52 SHEET 5 AA2 7 GLN E 81 VAL E 90 -1 N ILE E 89 O LEU E 105 SHEET 6 AA2 7 GLN E 64 LEU E 67 -1 N LEU E 67 O GLN E 81 SHEET 7 AA2 7 GLN E 30 ASN E 34 -1 N SER E 32 O ARG E 66 SHEET 1 AA3 2 ILE I 18 ASN I 24 0 SHEET 2 AA3 2 LEU I 29 TYR I 35 -1 O TYR I 35 N ILE I 18 SSBOND 1 CYS E 22 CYS E 157 1555 1555 2.09 SSBOND 2 CYS E 42 CYS E 58 1555 1555 2.05 SSBOND 3 CYS E 128 CYS E 230 1555 1555 2.01 SSBOND 4 CYS E 136 CYS E 203 1555 1555 2.03 SSBOND 5 CYS E 168 CYS E 182 1555 1555 2.04 SSBOND 6 CYS E 193 CYS E 217 1555 1555 2.07 SSBOND 7 CYS I 5 CYS I 55 1555 1555 2.04 SSBOND 8 CYS I 14 CYS I 38 1555 1555 2.09 SSBOND 9 CYS I 30 CYS I 51 1555 1555 2.13 LINK C CYS I 14 N OBF I 15 1555 1555 1.33 LINK C OBF I 15 N ALA I 16 1555 1555 1.33 LINK OE2 GLU E 70 CA CA E 308 1555 1555 2.33 LINK O ASN E 72 CA CA E 308 1555 1555 2.33 LINK O VAL E 75 CA CA E 308 1555 1555 2.21 LINK OE2 GLU E 80 CA CA E 308 1555 1555 2.35 LINK CA CA E 308 O HOH E 408 1555 1555 2.40 LINK CA CA E 308 O HOH E 476 1555 1555 2.37 SITE 1 AC1 6 LYS E 169 PRO E 173 GLY E 174 HOH E 473 SITE 2 AC1 6 HOH E 481 HOH E 510 SITE 1 AC2 9 TYR E 59 LYS E 60 SER E 61 HOH E 409 SITE 2 AC2 9 HOH E 434 HOH E 515 HOH E 566 HOH E 412 SITE 3 AC2 9 LYS I 46 SITE 1 AC3 3 LYS E 87 LYS E 107 HOH E 446 SITE 1 AC4 4 ASN E 95 THR E 98 ASN E 100 HOH E 417 SITE 1 AC5 5 THR E 177 SER E 178 SO4 E 306 HOH E 490 SITE 2 AC5 5 HOH E 595 SITE 1 AC6 5 ASN E 100 ASN E 179 SO4 E 305 HOH E 401 SITE 2 AC6 5 HOH E 423 SITE 1 AC7 4 TYR E 20 CYS E 22 THR E 26 VAL E 27 SITE 1 AC8 6 GLU E 70 ASN E 72 VAL E 75 GLU E 80 SITE 2 AC8 6 HOH E 476 HOH E 408 SITE 1 AC9 7 GLU I 7 ARG I 42 HOH I 209 HOH I 236 SITE 2 AC9 7 HOH I 202 HOH I 224 HOH I 255 SITE 1 AD1 7 PRO I 9 TYR I 10 THR I 11 GLY I 12 SITE 2 AD1 7 HOH I 263 HOH I 241 HOH I 253 SITE 1 AD2 7 ARG I 20 TYR I 35 HOH I 205 HOH I 234 SITE 2 AD2 7 HOH I 246 HOH I 207 HOH I 264 CRYST1 74.694 81.854 123.612 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013388 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012217 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008090 0.00000