HEADER HYDROLASE 07-FEB-15 4Y1F TITLE SAV1875-E17D COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN SAV1875; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS SUBSP. AUREUS MU50; SOURCE 3 ORGANISM_TAXID: 158878; SOURCE 4 STRAIN: MU50; SOURCE 5 GENE: SAV1875; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET21A KEYWDS DJ-1/PFPI/THIJ FAMILY, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR H.J.KIM,A.R.KWON,B.J.LEE REVDAT 2 08-NOV-23 4Y1F 1 JRNL REMARK REVDAT 1 06-JAN-16 4Y1F 0 JRNL AUTH H.J.KIM,A.R.KWON,B.J.LEE JRNL TITL STRUCTURAL AND FUNCTIONAL INSIGHT INTO THE DIFFERENT JRNL TITL 2 OXIDATION STATES OF SAV1875 FROM STAPHYLOCOCCUS AUREUS JRNL REF BIOCHEM.J. V. 473 55 2016 JRNL REFN ESSN 1470-8728 JRNL PMID 26487697 JRNL DOI 10.1042/BJ20150256 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.31 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 29169 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.195 REMARK 3 R VALUE (WORKING SET) : 0.194 REMARK 3 FREE R VALUE : 0.224 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1546 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.84 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1961 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.61 REMARK 3 BIN R VALUE (WORKING SET) : 0.2130 REMARK 3 BIN FREE R VALUE SET COUNT : 94 REMARK 3 BIN FREE R VALUE : 0.2840 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2619 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 68 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 20.53 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.04000 REMARK 3 B22 (A**2) : 0.11000 REMARK 3 B33 (A**2) : -0.16000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.136 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.125 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.078 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.450 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.945 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.932 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2661 ; 0.009 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3618 ; 1.330 ; 1.966 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 339 ; 6.987 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 128 ;37.691 ;25.781 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 439 ;15.551 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;17.538 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 426 ; 0.128 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2026 ; 0.021 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 172 REMARK 3 ORIGIN FOR THE GROUP (A): 4.4540 18.0600 18.7470 REMARK 3 T TENSOR REMARK 3 T11: 0.0356 T22: 0.0357 REMARK 3 T33: 0.0638 T12: -0.0078 REMARK 3 T13: 0.0022 T23: 0.0070 REMARK 3 L TENSOR REMARK 3 L11: 0.6982 L22: 0.7870 REMARK 3 L33: 0.1961 L12: 0.1921 REMARK 3 L13: -0.0265 L23: -0.1589 REMARK 3 S TENSOR REMARK 3 S11: -0.0033 S12: -0.0126 S13: -0.0212 REMARK 3 S21: -0.0435 S22: 0.0036 S23: 0.0015 REMARK 3 S31: 0.0032 S32: 0.0049 S33: -0.0004 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 3 B 172 REMARK 3 ORIGIN FOR THE GROUP (A): 17.3010 41.2050 5.4580 REMARK 3 T TENSOR REMARK 3 T11: 0.0850 T22: 0.0979 REMARK 3 T33: 0.0839 T12: -0.0294 REMARK 3 T13: -0.0237 T23: -0.0181 REMARK 3 L TENSOR REMARK 3 L11: 0.6285 L22: 0.8463 REMARK 3 L33: 0.5851 L12: 0.6632 REMARK 3 L13: -0.0535 L23: -0.0095 REMARK 3 S TENSOR REMARK 3 S11: -0.1688 S12: 0.0831 S13: 0.0617 REMARK 3 S21: -0.1483 S22: 0.1695 S23: -0.0136 REMARK 3 S31: 0.0682 S32: -0.0600 S33: -0.0007 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 201 A 240 REMARK 3 RESIDUE RANGE : B 201 B 228 REMARK 3 ORIGIN FOR THE GROUP (A): 8.8190 28.6910 16.0950 REMARK 3 T TENSOR REMARK 3 T11: 0.0375 T22: 0.0389 REMARK 3 T33: 0.0685 T12: -0.0083 REMARK 3 T13: 0.0030 T23: 0.0050 REMARK 3 L TENSOR REMARK 3 L11: 0.6998 L22: 0.5704 REMARK 3 L33: 0.1091 L12: 0.4960 REMARK 3 L13: -0.1827 L23: -0.1468 REMARK 3 S TENSOR REMARK 3 S11: -0.0421 S12: -0.0062 S13: -0.0087 REMARK 3 S21: -0.0122 S22: 0.0199 S23: 0.0213 REMARK 3 S31: -0.0302 S32: 0.0000 S33: 0.0222 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT REMARK 4 REMARK 4 4Y1F COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 25-FEB-15. REMARK 100 THE DEPOSITION ID IS D_1000206690. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-APR-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PAL/PLS REMARK 200 BEAMLINE : 5C (4A) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97960 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30762 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 7.200 REMARK 200 R MERGE (I) : 0.06800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 26.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.83 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 8.20 REMARK 200 R MERGE FOR SHELL (I) : 0.16300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 4Y0N REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.87 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.05 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PPG400, BIS-TRIS, PH 6.0, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 40.65650 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 47.07500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 40.65650 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 47.07500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLU A 173 REMARK 465 HIS A 174 REMARK 465 HIS A 175 REMARK 465 HIS A 176 REMARK 465 HIS A 177 REMARK 465 HIS A 178 REMARK 465 HIS A 179 REMARK 465 MET B 1 REMARK 465 THR B 2 REMARK 465 GLU B 173 REMARK 465 HIS B 174 REMARK 465 HIS B 175 REMARK 465 HIS B 176 REMARK 465 HIS B 177 REMARK 465 HIS B 178 REMARK 465 HIS B 179 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE1 GLN A 171 OE1 GLN A 171 2555 1.75 REMARK 500 NE2 GLN A 171 NE2 GLN A 171 2555 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU B 122 CA - CB - CG ANGL. DEV. = 14.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CSD A 105 -112.74 81.37 REMARK 500 ASN A 148 -99.85 52.72 REMARK 500 CSD B 105 -112.47 77.32 REMARK 500 ASN B 148 -105.02 48.44 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4Y0N RELATED DB: PDB REMARK 900 RELATED ID: 4Y1E RELATED DB: PDB REMARK 900 RELATED ID: 4Y1G RELATED DB: PDB REMARK 900 RELATED ID: 4Y1R RELATED DB: PDB DBREF 4Y1F A 1 171 UNP P0A0K0 Y1875_STAAM 1 171 DBREF 4Y1F B 1 171 UNP P0A0K0 Y1875_STAAM 1 171 SEQADV 4Y1F ASP A 17 UNP P0A0K0 GLU 17 ENGINEERED MUTATION SEQADV 4Y1F LEU A 172 UNP P0A0K0 EXPRESSION TAG SEQADV 4Y1F GLU A 173 UNP P0A0K0 EXPRESSION TAG SEQADV 4Y1F HIS A 174 UNP P0A0K0 EXPRESSION TAG SEQADV 4Y1F HIS A 175 UNP P0A0K0 EXPRESSION TAG SEQADV 4Y1F HIS A 176 UNP P0A0K0 EXPRESSION TAG SEQADV 4Y1F HIS A 177 UNP P0A0K0 EXPRESSION TAG SEQADV 4Y1F HIS A 178 UNP P0A0K0 EXPRESSION TAG SEQADV 4Y1F HIS A 179 UNP P0A0K0 EXPRESSION TAG SEQADV 4Y1F ASP B 17 UNP P0A0K0 GLU 17 ENGINEERED MUTATION SEQADV 4Y1F LEU B 172 UNP P0A0K0 EXPRESSION TAG SEQADV 4Y1F GLU B 173 UNP P0A0K0 EXPRESSION TAG SEQADV 4Y1F HIS B 174 UNP P0A0K0 EXPRESSION TAG SEQADV 4Y1F HIS B 175 UNP P0A0K0 EXPRESSION TAG SEQADV 4Y1F HIS B 176 UNP P0A0K0 EXPRESSION TAG SEQADV 4Y1F HIS B 177 UNP P0A0K0 EXPRESSION TAG SEQADV 4Y1F HIS B 178 UNP P0A0K0 EXPRESSION TAG SEQADV 4Y1F HIS B 179 UNP P0A0K0 EXPRESSION TAG SEQRES 1 A 179 MET THR LYS LYS VAL ALA ILE ILE LEU ALA ASN GLU PHE SEQRES 2 A 179 GLU ASP ILE ASP TYR SER SER PRO LYS GLU ALA LEU GLU SEQRES 3 A 179 ASN ALA GLY PHE ASN THR VAL VAL ILE GLY ASP THR ALA SEQRES 4 A 179 ASN SER GLU VAL VAL GLY LYS HIS GLY GLU LYS VAL THR SEQRES 5 A 179 VAL ASP VAL GLY ILE ALA GLU ALA LYS PRO GLU ASP TYR SEQRES 6 A 179 ASP ALA LEU LEU ILE PRO GLY GLY PHE SER PRO ASP HIS SEQRES 7 A 179 LEU ARG GLY ASP THR GLU GLY ARG TYR GLY THR PHE ALA SEQRES 8 A 179 LYS TYR PHE THR LYS ASN ASP VAL PRO THR PHE ALA ILE SEQRES 9 A 179 CSD HIS GLY PRO GLN ILE LEU ILE ASP THR ASP ASP LEU SEQRES 10 A 179 LYS GLY ARG THR LEU THR ALA VAL LEU ASN VAL ARG LYS SEQRES 11 A 179 ASP LEU SER ASN ALA GLY ALA HIS VAL VAL ASP GLU SER SEQRES 12 A 179 VAL VAL VAL ASP ASN ASN ILE VAL THR SER ARG VAL PRO SEQRES 13 A 179 ASP ASP LEU ASP ASP PHE ASN ARG GLU ILE VAL LYS GLN SEQRES 14 A 179 LEU GLN LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 B 179 MET THR LYS LYS VAL ALA ILE ILE LEU ALA ASN GLU PHE SEQRES 2 B 179 GLU ASP ILE ASP TYR SER SER PRO LYS GLU ALA LEU GLU SEQRES 3 B 179 ASN ALA GLY PHE ASN THR VAL VAL ILE GLY ASP THR ALA SEQRES 4 B 179 ASN SER GLU VAL VAL GLY LYS HIS GLY GLU LYS VAL THR SEQRES 5 B 179 VAL ASP VAL GLY ILE ALA GLU ALA LYS PRO GLU ASP TYR SEQRES 6 B 179 ASP ALA LEU LEU ILE PRO GLY GLY PHE SER PRO ASP HIS SEQRES 7 B 179 LEU ARG GLY ASP THR GLU GLY ARG TYR GLY THR PHE ALA SEQRES 8 B 179 LYS TYR PHE THR LYS ASN ASP VAL PRO THR PHE ALA ILE SEQRES 9 B 179 CSD HIS GLY PRO GLN ILE LEU ILE ASP THR ASP ASP LEU SEQRES 10 B 179 LYS GLY ARG THR LEU THR ALA VAL LEU ASN VAL ARG LYS SEQRES 11 B 179 ASP LEU SER ASN ALA GLY ALA HIS VAL VAL ASP GLU SER SEQRES 12 B 179 VAL VAL VAL ASP ASN ASN ILE VAL THR SER ARG VAL PRO SEQRES 13 B 179 ASP ASP LEU ASP ASP PHE ASN ARG GLU ILE VAL LYS GLN SEQRES 14 B 179 LEU GLN LEU GLU HIS HIS HIS HIS HIS HIS MODRES 4Y1F CSD A 105 CYS MODIFIED RESIDUE MODRES 4Y1F CSD B 105 CYS MODIFIED RESIDUE HET CSD A 105 8 HET CSD B 105 8 HETNAM CSD 3-SULFINOALANINE HETSYN CSD S-CYSTEINESULFINIC ACID; S-SULFINOCYSTEINE FORMUL 1 CSD 2(C3 H7 N O4 S) FORMUL 3 HOH *68(H2 O) HELIX 1 AA1 GLU A 14 ALA A 28 1 15 HELIX 2 AA2 LYS A 61 TYR A 65 5 5 HELIX 3 AA3 PHE A 74 GLY A 81 1 8 HELIX 4 AA4 GLY A 85 ASN A 97 1 13 HELIX 5 AA5 PRO A 108 ASP A 113 1 6 HELIX 6 AA6 VAL A 125 ASN A 127 5 3 HELIX 7 AA7 VAL A 128 ALA A 135 1 8 HELIX 8 AA8 VAL A 155 ASP A 157 5 3 HELIX 9 AA9 ASP A 158 LEU A 172 1 15 HELIX 10 AB1 GLU B 14 ALA B 28 1 15 HELIX 11 AB2 LYS B 61 TYR B 65 5 5 HELIX 12 AB3 PHE B 74 ARG B 80 1 7 HELIX 13 AB4 GLY B 85 ASP B 98 1 14 HELIX 14 AB5 GLY B 107 ASP B 113 1 7 HELIX 15 AB6 VAL B 125 ASN B 127 5 3 HELIX 16 AB7 VAL B 128 ALA B 135 1 8 HELIX 17 AB8 VAL B 155 ASP B 157 5 3 HELIX 18 AB9 ASP B 158 GLN B 171 1 14 SHEET 1 AA1 7 VAL A 55 GLY A 56 0 SHEET 2 AA1 7 ASN A 31 GLY A 36 1 N VAL A 34 O VAL A 55 SHEET 3 AA1 7 LYS A 4 ILE A 8 1 N ILE A 7 O ILE A 35 SHEET 4 AA1 7 ALA A 67 ILE A 70 1 O LEU A 69 N ALA A 6 SHEET 5 AA1 7 THR A 101 ILE A 104 1 O PHE A 102 N LEU A 68 SHEET 6 AA1 7 ILE A 150 SER A 153 1 O VAL A 151 N THR A 101 SHEET 7 AA1 7 VAL A 144 ASP A 147 -1 N ASP A 147 O ILE A 150 SHEET 1 AA2 2 GLU A 42 VAL A 44 0 SHEET 2 AA2 2 LYS A 50 THR A 52 -1 O VAL A 51 N VAL A 43 SHEET 1 AA3 2 THR A 121 LEU A 122 0 SHEET 2 AA3 2 HIS A 138 VAL A 139 1 O HIS A 138 N LEU A 122 SHEET 1 AA4 7 VAL B 55 GLY B 56 0 SHEET 2 AA4 7 ASN B 31 GLY B 36 1 N VAL B 34 O VAL B 55 SHEET 3 AA4 7 LYS B 4 ILE B 8 1 N ILE B 7 O ILE B 35 SHEET 4 AA4 7 ALA B 67 ILE B 70 1 O LEU B 69 N ALA B 6 SHEET 5 AA4 7 THR B 101 ILE B 104 1 O PHE B 102 N LEU B 68 SHEET 6 AA4 7 ILE B 150 SER B 153 1 O VAL B 151 N THR B 101 SHEET 7 AA4 7 VAL B 144 ASP B 147 -1 N ASP B 147 O ILE B 150 SHEET 1 AA5 2 GLU B 42 VAL B 44 0 SHEET 2 AA5 2 LYS B 50 THR B 52 -1 O VAL B 51 N VAL B 43 SHEET 1 AA6 2 THR B 121 LEU B 122 0 SHEET 2 AA6 2 HIS B 138 VAL B 139 1 O HIS B 138 N LEU B 122 LINK C ILE A 104 N CSD A 105 1555 1555 1.35 LINK C CSD A 105 N HIS A 106 1555 1555 1.33 LINK C ILE B 104 N CSD B 105 1555 1555 1.35 LINK C CSD B 105 N HIS B 106 1555 1555 1.33 CRYST1 81.313 94.150 42.198 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012298 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010621 0.000000 0.00000 SCALE3 0.000000 0.000000 0.023698 0.00000