HEADER HYDROLASE 08-FEB-15 4Y1R TITLE SAV1875-CYSTEINESULFONIC ACID COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN SAV1875; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: UNCHARACTERIZED PROTEIN SAV1875; COMPND 7 CHAIN: B; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS SUBSP. AUREUS MU50; SOURCE 3 ORGANISM_TAXID: 158878; SOURCE 4 STRAIN: MU50; SOURCE 5 GENE: SAV1875; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET21A; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS SUBSP. AUREUS MU50; SOURCE 13 ORGANISM_TAXID: 158878; SOURCE 14 STRAIN: MU50; SOURCE 15 GENE: SAV1875; SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 17 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 18 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: PET21A KEYWDS DJ-1/PFPI/THIJ FAMILY, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR H.J.KIM,A.R.KWON,B.J.LEE REVDAT 3 15-NOV-23 4Y1R 1 REMARK REVDAT 2 08-NOV-23 4Y1R 1 JRNL REMARK REVDAT 1 06-JAN-16 4Y1R 0 JRNL AUTH H.J.KIM,A.R.KWON,B.J.LEE JRNL TITL STRUCTURAL AND FUNCTIONAL INSIGHT INTO THE DIFFERENT JRNL TITL 2 OXIDATION STATES OF SAV1875 FROM STAPHYLOCOCCUS AUREUS JRNL REF BIOCHEM.J. V. 473 55 2016 JRNL REFN ESSN 1470-8728 JRNL PMID 26487697 JRNL DOI 10.1042/BJ20150256 REMARK 2 REMARK 2 RESOLUTION. 1.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.33 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 3 NUMBER OF REFLECTIONS : 37806 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.191 REMARK 3 R VALUE (WORKING SET) : 0.190 REMARK 3 FREE R VALUE : 0.217 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1993 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.65 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.69 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2236 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 83.29 REMARK 3 BIN R VALUE (WORKING SET) : 0.2100 REMARK 3 BIN FREE R VALUE SET COUNT : 111 REMARK 3 BIN FREE R VALUE : 0.2380 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2613 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 114 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 17.24 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.12000 REMARK 3 B22 (A**2) : -0.11000 REMARK 3 B33 (A**2) : -0.01000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.103 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.099 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.059 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.737 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.952 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.942 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2678 ; 0.009 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3648 ; 1.379 ; 1.965 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 344 ; 7.150 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 131 ;37.543 ;25.802 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 442 ;13.514 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;16.719 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 428 ; 0.303 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2048 ; 0.019 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 172 REMARK 3 ORIGIN FOR THE GROUP (A): 4.6280 18.0970 18.7370 REMARK 3 T TENSOR REMARK 3 T11: 0.0436 T22: 0.0819 REMARK 3 T33: 0.0763 T12: -0.0039 REMARK 3 T13: 0.0029 T23: 0.0062 REMARK 3 L TENSOR REMARK 3 L11: 0.4965 L22: 0.7343 REMARK 3 L33: 0.1405 L12: 0.1983 REMARK 3 L13: 0.0170 L23: -0.1896 REMARK 3 S TENSOR REMARK 3 S11: 0.0071 S12: -0.0224 S13: -0.0388 REMARK 3 S21: -0.0390 S22: 0.0037 S23: -0.0190 REMARK 3 S31: -0.0052 S32: -0.0083 S33: -0.0108 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 4 B 172 REMARK 3 ORIGIN FOR THE GROUP (A): 17.5090 41.1190 5.7130 REMARK 3 T TENSOR REMARK 3 T11: 0.1398 T22: 0.1348 REMARK 3 T33: 0.0540 T12: -0.0579 REMARK 3 T13: -0.0096 T23: -0.0019 REMARK 3 L TENSOR REMARK 3 L11: 0.8290 L22: 1.4368 REMARK 3 L33: 0.0196 L12: 1.0818 REMARK 3 L13: 0.0562 L23: 0.0760 REMARK 3 S TENSOR REMARK 3 S11: -0.2565 S12: 0.1602 S13: 0.0063 REMARK 3 S21: -0.3039 S22: 0.2410 S23: 0.0010 REMARK 3 S31: -0.0077 S32: 0.0091 S33: 0.0155 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 201 A 265 REMARK 3 RESIDUE RANGE : B 201 B 249 REMARK 3 ORIGIN FOR THE GROUP (A): 8.1570 29.1340 16.6390 REMARK 3 T TENSOR REMARK 3 T11: 0.0636 T22: 0.0676 REMARK 3 T33: 0.0759 T12: -0.0067 REMARK 3 T13: 0.0000 T23: -0.0048 REMARK 3 L TENSOR REMARK 3 L11: 0.6393 L22: 0.8472 REMARK 3 L33: 0.1089 L12: 0.6258 REMARK 3 L13: -0.1055 L23: -0.2323 REMARK 3 S TENSOR REMARK 3 S11: -0.0317 S12: -0.0297 S13: 0.0141 REMARK 3 S21: -0.0389 S22: 0.0286 S23: 0.0170 REMARK 3 S31: -0.0255 S32: -0.0146 S33: 0.0031 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT REMARK 4 REMARK 4 4Y1R COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 25-FEB-15. REMARK 100 THE DEPOSITION ID IS D_1000206692. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-OCT-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PAL/PLS REMARK 200 BEAMLINE : 5C (4A) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97960 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 39845 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.650 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 200 DATA REDUNDANCY : 11.80 REMARK 200 R MERGE (I) : 0.05700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 23.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.65 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.68 REMARK 200 COMPLETENESS FOR SHELL (%) : 83.1 REMARK 200 DATA REDUNDANCY IN SHELL : 7.60 REMARK 200 R MERGE FOR SHELL (I) : 0.23600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 4Y0N REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.53 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.07 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PPG400, BIS-TRIS, PH 5.5, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 40.71450 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 47.35750 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 40.71450 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 47.35750 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLU A 173 REMARK 465 HIS A 174 REMARK 465 HIS A 175 REMARK 465 HIS A 176 REMARK 465 HIS A 177 REMARK 465 HIS A 178 REMARK 465 HIS A 179 REMARK 465 MET B 1 REMARK 465 THR B 2 REMARK 465 LYS B 3 REMARK 465 GLU B 173 REMARK 465 HIS B 174 REMARK 465 HIS B 175 REMARK 465 HIS B 176 REMARK 465 HIS B 177 REMARK 465 HIS B 178 REMARK 465 HIS B 179 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NE2 GLN A 169 O HOH A 201 1.87 REMARK 500 CG GLN A 169 O HOH A 201 1.90 REMARK 500 CD GLN A 169 O HOH A 201 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE1 GLN A 171 OE1 GLN A 171 2555 1.35 REMARK 500 NE2 GLN A 171 NE2 GLN A 171 2555 1.75 REMARK 500 OD2 ASP B 157 OD2 ASP B 157 2565 1.81 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 OCS A 105 -107.82 75.63 REMARK 500 ASN A 148 -100.04 57.30 REMARK 500 CSD B 105 -109.96 75.59 REMARK 500 ASN B 148 -103.40 50.68 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4Y0N RELATED DB: PDB REMARK 900 RELATED ID: 4Y1E RELATED DB: PDB REMARK 900 RELATED ID: 4Y1F RELATED DB: PDB REMARK 900 RELATED ID: 4Y1G RELATED DB: PDB DBREF 4Y1R A 1 171 UNP P0A0K0 Y1875_STAAM 1 171 DBREF 4Y1R B 1 171 UNP P0A0K0 Y1875_STAAM 1 171 SEQADV 4Y1R LEU A 172 UNP P0A0K0 EXPRESSION TAG SEQADV 4Y1R GLU A 173 UNP P0A0K0 EXPRESSION TAG SEQADV 4Y1R HIS A 174 UNP P0A0K0 EXPRESSION TAG SEQADV 4Y1R HIS A 175 UNP P0A0K0 EXPRESSION TAG SEQADV 4Y1R HIS A 176 UNP P0A0K0 EXPRESSION TAG SEQADV 4Y1R HIS A 177 UNP P0A0K0 EXPRESSION TAG SEQADV 4Y1R HIS A 178 UNP P0A0K0 EXPRESSION TAG SEQADV 4Y1R HIS A 179 UNP P0A0K0 EXPRESSION TAG SEQADV 4Y1R LEU B 172 UNP P0A0K0 EXPRESSION TAG SEQADV 4Y1R GLU B 173 UNP P0A0K0 EXPRESSION TAG SEQADV 4Y1R HIS B 174 UNP P0A0K0 EXPRESSION TAG SEQADV 4Y1R HIS B 175 UNP P0A0K0 EXPRESSION TAG SEQADV 4Y1R HIS B 176 UNP P0A0K0 EXPRESSION TAG SEQADV 4Y1R HIS B 177 UNP P0A0K0 EXPRESSION TAG SEQADV 4Y1R HIS B 178 UNP P0A0K0 EXPRESSION TAG SEQADV 4Y1R HIS B 179 UNP P0A0K0 EXPRESSION TAG SEQRES 1 A 179 MET THR LYS LYS VAL ALA ILE ILE LEU ALA ASN GLU PHE SEQRES 2 A 179 GLU ASP ILE GLU TYR SER SER PRO LYS GLU ALA LEU GLU SEQRES 3 A 179 ASN ALA GLY PHE ASN THR VAL VAL ILE GLY ASP THR ALA SEQRES 4 A 179 ASN SER GLU VAL VAL GLY LYS HIS GLY GLU LYS VAL THR SEQRES 5 A 179 VAL ASP VAL GLY ILE ALA GLU ALA LYS PRO GLU ASP TYR SEQRES 6 A 179 ASP ALA LEU LEU ILE PRO GLY GLY PHE SER PRO ASP HIS SEQRES 7 A 179 LEU ARG GLY ASP THR GLU GLY ARG TYR GLY THR PHE ALA SEQRES 8 A 179 LYS TYR PHE THR LYS ASN ASP VAL PRO THR PHE ALA ILE SEQRES 9 A 179 OCS HIS GLY PRO GLN ILE LEU ILE ASP THR ASP ASP LEU SEQRES 10 A 179 LYS GLY ARG THR LEU THR ALA VAL LEU ASN VAL ARG LYS SEQRES 11 A 179 ASP LEU SER ASN ALA GLY ALA HIS VAL VAL ASP GLU SER SEQRES 12 A 179 VAL VAL VAL ASP ASN ASN ILE VAL THR SER ARG VAL PRO SEQRES 13 A 179 ASP ASP LEU ASP ASP PHE ASN ARG GLU ILE VAL LYS GLN SEQRES 14 A 179 LEU GLN LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 B 179 MET THR LYS LYS VAL ALA ILE ILE LEU ALA ASN GLU PHE SEQRES 2 B 179 GLU ASP ILE GLU TYR SER SER PRO LYS GLU ALA LEU GLU SEQRES 3 B 179 ASN ALA GLY PHE ASN THR VAL VAL ILE GLY ASP THR ALA SEQRES 4 B 179 ASN SER GLU VAL VAL GLY LYS HIS GLY GLU LYS VAL THR SEQRES 5 B 179 VAL ASP VAL GLY ILE ALA GLU ALA LYS PRO GLU ASP TYR SEQRES 6 B 179 ASP ALA LEU LEU ILE PRO GLY GLY PHE SER PRO ASP HIS SEQRES 7 B 179 LEU ARG GLY ASP THR GLU GLY ARG TYR GLY THR PHE ALA SEQRES 8 B 179 LYS TYR PHE THR LYS ASN ASP VAL PRO THR PHE ALA ILE SEQRES 9 B 179 CSD HIS GLY PRO GLN ILE LEU ILE ASP THR ASP ASP LEU SEQRES 10 B 179 LYS GLY ARG THR LEU THR ALA VAL LEU ASN VAL ARG LYS SEQRES 11 B 179 ASP LEU SER ASN ALA GLY ALA HIS VAL VAL ASP GLU SER SEQRES 12 B 179 VAL VAL VAL ASP ASN ASN ILE VAL THR SER ARG VAL PRO SEQRES 13 B 179 ASP ASP LEU ASP ASP PHE ASN ARG GLU ILE VAL LYS GLN SEQRES 14 B 179 LEU GLN LEU GLU HIS HIS HIS HIS HIS HIS MODRES 4Y1R OCS A 105 CYS MODIFIED RESIDUE MODRES 4Y1R CSD B 105 CYS MODIFIED RESIDUE HET OCS A 105 9 HET CSD B 105 8 HETNAM OCS CYSTEINESULFONIC ACID HETNAM CSD 3-SULFINOALANINE HETSYN CSD S-CYSTEINESULFINIC ACID; S-SULFINOCYSTEINE FORMUL 1 OCS C3 H7 N O5 S FORMUL 2 CSD C3 H7 N O4 S FORMUL 3 HOH *114(H2 O) HELIX 1 AA1 GLU A 14 ALA A 28 1 15 HELIX 2 AA2 LYS A 61 TYR A 65 5 5 HELIX 3 AA3 PHE A 74 ARG A 80 1 7 HELIX 4 AA4 GLY A 85 ASN A 97 1 13 HELIX 5 AA5 GLY A 107 ASP A 113 1 7 HELIX 6 AA6 VAL A 125 ASN A 127 5 3 HELIX 7 AA7 VAL A 128 ALA A 135 1 8 HELIX 8 AA8 VAL A 155 ASP A 157 5 3 HELIX 9 AA9 ASP A 158 LEU A 172 1 15 HELIX 10 AB1 GLU B 14 ALA B 28 1 15 HELIX 11 AB2 LYS B 61 TYR B 65 5 5 HELIX 12 AB3 PHE B 74 GLY B 81 1 8 HELIX 13 AB4 GLY B 85 ASP B 98 1 14 HELIX 14 AB5 GLY B 107 ASP B 113 1 7 HELIX 15 AB6 VAL B 125 ASN B 127 5 3 HELIX 16 AB7 VAL B 128 ALA B 135 1 8 HELIX 17 AB8 VAL B 155 ASP B 157 5 3 HELIX 18 AB9 ASP B 158 LEU B 172 1 15 SHEET 1 AA1 7 VAL A 55 GLY A 56 0 SHEET 2 AA1 7 ASN A 31 GLY A 36 1 N VAL A 34 O VAL A 55 SHEET 3 AA1 7 LYS A 4 ILE A 8 1 N ILE A 7 O ILE A 35 SHEET 4 AA1 7 ALA A 67 ILE A 70 1 O LEU A 69 N ALA A 6 SHEET 5 AA1 7 THR A 101 ILE A 104 1 O PHE A 102 N LEU A 68 SHEET 6 AA1 7 ILE A 150 SER A 153 1 O VAL A 151 N THR A 101 SHEET 7 AA1 7 VAL A 145 ASP A 147 -1 N ASP A 147 O ILE A 150 SHEET 1 AA2 2 GLU A 42 VAL A 44 0 SHEET 2 AA2 2 LYS A 50 THR A 52 -1 O VAL A 51 N VAL A 43 SHEET 1 AA3 2 THR A 121 LEU A 122 0 SHEET 2 AA3 2 HIS A 138 VAL A 139 1 O HIS A 138 N LEU A 122 SHEET 1 AA4 7 VAL B 55 GLY B 56 0 SHEET 2 AA4 7 THR B 32 GLY B 36 1 N VAL B 34 O VAL B 55 SHEET 3 AA4 7 VAL B 5 ILE B 8 1 N ILE B 7 O ILE B 35 SHEET 4 AA4 7 ALA B 67 ILE B 70 1 O LEU B 69 N ALA B 6 SHEET 5 AA4 7 THR B 101 ILE B 104 1 O PHE B 102 N LEU B 68 SHEET 6 AA4 7 ILE B 150 SER B 153 1 O VAL B 151 N THR B 101 SHEET 7 AA4 7 VAL B 145 ASP B 147 -1 N ASP B 147 O ILE B 150 SHEET 1 AA5 2 GLU B 42 VAL B 44 0 SHEET 2 AA5 2 LYS B 50 THR B 52 -1 O VAL B 51 N VAL B 43 SHEET 1 AA6 2 THR B 121 LEU B 122 0 SHEET 2 AA6 2 HIS B 138 VAL B 139 1 O HIS B 138 N LEU B 122 LINK C ILE A 104 N OCS A 105 1555 1555 1.35 LINK C OCS A 105 N HIS A 106 1555 1555 1.34 LINK C ILE B 104 N CSD B 105 1555 1555 1.35 LINK C CSD B 105 N HIS B 106 1555 1555 1.33 CRYST1 81.429 94.715 42.418 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012281 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010558 0.000000 0.00000 SCALE3 0.000000 0.000000 0.023575 0.00000