data_4Y1S # _entry.id 4Y1S # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4Y1S pdb_00004y1s 10.2210/pdb4y1s/pdb WWPDB D_1000206705 ? ? # _pdbx_database_related.content_type unspecified _pdbx_database_related.db_id 4Y1T _pdbx_database_related.db_name PDB _pdbx_database_related.details . # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 4Y1S _pdbx_database_status.recvd_initial_deposition_date 2015-02-09 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Conroy, P.J.' 1 'Yagi, H.' 2 'Whisstock, J.C.' 3 'Norton, R.S.' 4 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev J.Biol.Chem. _citation.journal_id_ASTM JBCHA3 _citation.journal_id_CSD 0071 _citation.journal_id_ISSN 1083-351X _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 290 _citation.language ? _citation.page_first 25213 _citation.page_last 25226 _citation.title 'Structural Basis for Ca2+-mediated Interaction of the Perforin C2 Domain with Lipid Membranes.' _citation.year 2015 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1074/jbc.M115.668384 _citation.pdbx_database_id_PubMed 26306037 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Yagi, H.' 1 ? primary 'Conroy, P.J.' 2 ? primary 'Leung, E.W.' 3 ? primary 'Law, R.H.' 4 ? primary 'Trapani, J.A.' 5 ? primary 'Voskoboinik, I.' 6 ? primary 'Whisstock, J.C.' 7 ? primary 'Norton, R.S.' 8 ? # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 4Y1S _cell.details ? _cell.formula_units_Z ? _cell.length_a 37.700 _cell.length_a_esd ? _cell.length_b 43.211 _cell.length_b_esd ? _cell.length_c 68.077 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 4Y1S _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Perforin-1 16475.088 1 ? 'W427A, Y430A, Y486A, W488A' 'C2 domain (UNP residues 410-535)' ? 2 non-polymer syn 'CALCIUM ION' 40.078 1 ? ? ? ? 3 water nat water 18.015 134 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'P1,Cytolysin,Lymphocyte pore-forming protein' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;QRGLAHLVVSNFRAEHLAGDATTATDAYLKVFFGGQEFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDADAGAD DDLLGSCDRSPHSGFHEVTCELNHGRVKFSYHAKCLPHLTGGTCLEGQAGQHHHHHHGAYPYDVPDYAS ; _entity_poly.pdbx_seq_one_letter_code_can ;QRGLAHLVVSNFRAEHLAGDATTATDAYLKVFFGGQEFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDADAGAD DDLLGSCDRSPHSGFHEVTCELNHGRVKFSYHAKCLPHLTGGTCLEGQAGQHHHHHHGAYPYDVPDYAS ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLN n 1 2 ARG n 1 3 GLY n 1 4 LEU n 1 5 ALA n 1 6 HIS n 1 7 LEU n 1 8 VAL n 1 9 VAL n 1 10 SER n 1 11 ASN n 1 12 PHE n 1 13 ARG n 1 14 ALA n 1 15 GLU n 1 16 HIS n 1 17 LEU n 1 18 ALA n 1 19 GLY n 1 20 ASP n 1 21 ALA n 1 22 THR n 1 23 THR n 1 24 ALA n 1 25 THR n 1 26 ASP n 1 27 ALA n 1 28 TYR n 1 29 LEU n 1 30 LYS n 1 31 VAL n 1 32 PHE n 1 33 PHE n 1 34 GLY n 1 35 GLY n 1 36 GLN n 1 37 GLU n 1 38 PHE n 1 39 ARG n 1 40 THR n 1 41 GLY n 1 42 VAL n 1 43 VAL n 1 44 TRP n 1 45 ASN n 1 46 ASN n 1 47 ASN n 1 48 ASN n 1 49 PRO n 1 50 ARG n 1 51 TRP n 1 52 THR n 1 53 ASP n 1 54 LYS n 1 55 MET n 1 56 ASP n 1 57 PHE n 1 58 GLU n 1 59 ASN n 1 60 VAL n 1 61 LEU n 1 62 LEU n 1 63 SER n 1 64 THR n 1 65 GLY n 1 66 GLY n 1 67 PRO n 1 68 LEU n 1 69 ARG n 1 70 VAL n 1 71 GLN n 1 72 VAL n 1 73 TRP n 1 74 ASP n 1 75 ALA n 1 76 ASP n 1 77 ALA n 1 78 GLY n 1 79 ALA n 1 80 ASP n 1 81 ASP n 1 82 ASP n 1 83 LEU n 1 84 LEU n 1 85 GLY n 1 86 SER n 1 87 CYS n 1 88 ASP n 1 89 ARG n 1 90 SER n 1 91 PRO n 1 92 HIS n 1 93 SER n 1 94 GLY n 1 95 PHE n 1 96 HIS n 1 97 GLU n 1 98 VAL n 1 99 THR n 1 100 CYS n 1 101 GLU n 1 102 LEU n 1 103 ASN n 1 104 HIS n 1 105 GLY n 1 106 ARG n 1 107 VAL n 1 108 LYS n 1 109 PHE n 1 110 SER n 1 111 TYR n 1 112 HIS n 1 113 ALA n 1 114 LYS n 1 115 CYS n 1 116 LEU n 1 117 PRO n 1 118 HIS n 1 119 LEU n 1 120 THR n 1 121 GLY n 1 122 GLY n 1 123 THR n 1 124 CYS n 1 125 LEU n 1 126 GLU n 1 127 GLY n 1 128 GLN n 1 129 ALA n 1 130 GLY n 1 131 GLN n 1 132 HIS n 1 133 HIS n 1 134 HIS n 1 135 HIS n 1 136 HIS n 1 137 HIS n 1 138 GLY n 1 139 ALA n 1 140 TYR n 1 141 PRO n 1 142 TYR n 1 143 ASP n 1 144 VAL n 1 145 PRO n 1 146 ASP n 1 147 TYR n 1 148 ALA n 1 149 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 149 _entity_src_gen.gene_src_common_name 'house mouse' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'Prf1, Pfp' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mus musculus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10090 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain Top10F` _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pComb3X _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code PERF_MOUSE _struct_ref.pdbx_db_accession P10820 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;QRGLAHLVVSNFRAEHLWGDYTTATDAYLKVFFGGQEFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDADYGWD DDLLGSCDRSPHSGFHEVTCELNHGRVKFSYHAKCLPHLTGGTCLE ; _struct_ref.pdbx_align_begin 410 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4Y1S _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 126 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P10820 _struct_ref_seq.db_align_beg 410 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 535 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 410 _struct_ref_seq.pdbx_auth_seq_align_end 535 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4Y1S ALA A 18 ? UNP P10820 TRP 427 'engineered mutation' 427 1 1 4Y1S ALA A 21 ? UNP P10820 TYR 430 'engineered mutation' 430 2 1 4Y1S ALA A 77 ? UNP P10820 TYR 486 'engineered mutation' 486 3 1 4Y1S ALA A 79 ? UNP P10820 TRP 488 'engineered mutation' 488 4 1 4Y1S GLY A 127 ? UNP P10820 ? ? 'expression tag' 536 5 1 4Y1S GLN A 128 ? UNP P10820 ? ? 'expression tag' 537 6 1 4Y1S ALA A 129 ? UNP P10820 ? ? 'expression tag' 538 7 1 4Y1S GLY A 130 ? UNP P10820 ? ? 'expression tag' 539 8 1 4Y1S GLN A 131 ? UNP P10820 ? ? 'expression tag' 540 9 1 4Y1S HIS A 132 ? UNP P10820 ? ? 'expression tag' 541 10 1 4Y1S HIS A 133 ? UNP P10820 ? ? 'expression tag' 542 11 1 4Y1S HIS A 134 ? UNP P10820 ? ? 'expression tag' 543 12 1 4Y1S HIS A 135 ? UNP P10820 ? ? 'expression tag' 544 13 1 4Y1S HIS A 136 ? UNP P10820 ? ? 'expression tag' 545 14 1 4Y1S HIS A 137 ? UNP P10820 ? ? 'expression tag' 546 15 1 4Y1S GLY A 138 ? UNP P10820 ? ? 'expression tag' 547 16 1 4Y1S ALA A 139 ? UNP P10820 ? ? 'expression tag' 548 17 1 4Y1S TYR A 140 ? UNP P10820 ? ? 'expression tag' 549 18 1 4Y1S PRO A 141 ? UNP P10820 ? ? 'expression tag' 550 19 1 4Y1S TYR A 142 ? UNP P10820 ? ? 'expression tag' 551 20 1 4Y1S ASP A 143 ? UNP P10820 ? ? 'expression tag' 552 21 1 4Y1S VAL A 144 ? UNP P10820 ? ? 'expression tag' 553 22 1 4Y1S PRO A 145 ? UNP P10820 ? ? 'expression tag' 554 23 1 4Y1S ASP A 146 ? UNP P10820 ? ? 'expression tag' 555 24 1 4Y1S TYR A 147 ? UNP P10820 ? ? 'expression tag' 556 25 1 4Y1S ALA A 148 ? UNP P10820 ? ? 'expression tag' 557 26 1 4Y1S SER A 149 ? UNP P10820 ? ? 'expression tag' 558 27 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 4Y1S _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 1.68 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 26.91 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 6.0 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.1M MES pH 6.0, 0.2 M NaCl and 20% (w/v) polyethylene glycol 2000 monomethyl ether' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2014-12-18 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.953697 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'AUSTRALIAN SYNCHROTRON BEAMLINE MX2' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.953697 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline MX2 _diffrn_source.pdbx_synchrotron_site 'Australian Synchrotron' # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 4Y1S _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.611 _reflns.d_resolution_low 36.482 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 14926 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.87 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 7.1 _reflns.pdbx_Rmerge_I_obs 0.2159 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 30.06 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.979 _reflns.pdbx_R_split ? # _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.Rmerge_I_obs 0.5473 _reflns_shell.d_res_high 1.611 _reflns_shell.d_res_low 1.669 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_sigI_obs 4.83 _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_gt ? _reflns_shell.number_measured_obs 1443 _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_gt ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_CC_half 0.86 _reflns_shell.pdbx_R_split ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_redundancy 6.8 _reflns_shell.pdbx_rejects ? _reflns_shell.percent_possible_all 98.90 _reflns_shell.percent_possible_gt ? _reflns_shell.percent_possible_obs ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 4Y1S _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.611 _refine.ls_d_res_low 36.482 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 14925 _refine.ls_number_reflns_R_free 755 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.87 _refine.ls_percent_reflns_R_free 5.06 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1671 _refine.ls_R_factor_R_free 0.1852 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1661 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.36 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 3NSJ _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details 'Random Selection' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 18.30 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.14 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 954 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 1 _refine_hist.number_atoms_solvent 134 _refine_hist.number_atoms_total 1089 _refine_hist.d_res_high 1.611 _refine_hist.d_res_low 36.482 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.011 ? 1016 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.286 ? 1381 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 12.311 ? 354 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.070 ? 145 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.007 ? 185 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 1.6111 1.7355 . . 141 2774 99.00 . . . 0.2488 . 0.1866 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.7355 1.9101 . . 142 2789 100.00 . . . 0.2107 . 0.1595 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.9101 2.1865 . . 136 2817 100.00 . . . 0.1989 . 0.1488 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.1865 2.7546 . . 167 2825 100.00 . . . 0.1628 . 0.1684 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.7546 36.4916 . . 169 2965 100.00 . . . 0.1754 . 0.1701 . . . . . . . . . . # _struct.entry_id 4Y1S _struct.title 'Structural basis for Ca2+-mediated interaction of the perforin C2 domain with lipid membranes' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 4Y1S _struct_keywords.text 'Perforin, C2 domain, Calcium Binding, IMMUNE SYSTEM' _struct_keywords.pdbx_keywords 'IMMUNE SYSTEM' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 87 SG ? ? ? 1_555 A CYS 100 SG ? ? A CYS 496 A CYS 509 1_555 ? ? ? ? ? ? ? 2.047 ? ? disulf2 disulf ? ? A CYS 115 SG ? ? ? 1_555 A CYS 124 SG ? ? A CYS 524 A CYS 533 1_555 ? ? ? ? ? ? ? 2.043 ? ? metalc1 metalc ? ? A ASP 76 O ? ? ? 1_555 B CA . CA ? ? A ASP 485 A CA 601 1_555 ? ? ? ? ? ? ? 2.477 ? ? metalc2 metalc ? ? A ALA 79 O ? ? ? 1_555 B CA . CA ? ? A ALA 488 A CA 601 1_555 ? ? ? ? ? ? ? 2.441 ? ? metalc3 metalc ? ? A ASP 81 OD1 ? ? ? 1_555 B CA . CA ? ? A ASP 490 A CA 601 1_555 ? ? ? ? ? ? ? 2.461 ? ? metalc4 metalc ? ? B CA . CA ? ? ? 1_555 C HOH . O ? ? A CA 601 A HOH 771 1_555 ? ? ? ? ? ? ? 2.667 ? ? metalc5 metalc ? ? B CA . CA ? ? ? 1_555 C HOH . O ? ? A CA 601 A HOH 774 1_555 ? ? ? ? ? ? ? 2.285 ? ? metalc6 metalc ? ? B CA . CA ? ? ? 1_555 C HOH . O ? ? A CA 601 A HOH 811 1_555 ? ? ? ? ? ? ? 2.289 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? metalc ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLY _struct_mon_prot_cis.label_seq_id 66 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLY _struct_mon_prot_cis.auth_seq_id 475 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 67 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 476 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 1.46 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 3 ? AA2 ? 4 ? AA3 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ARG A 50 ? TRP A 51 ? ARG A 459 TRP A 460 AA1 2 LEU A 4 ? GLU A 15 ? LEU A 413 GLU A 424 AA1 3 MET A 55 ? LEU A 61 ? MET A 464 LEU A 470 AA2 1 ARG A 50 ? TRP A 51 ? ARG A 459 TRP A 460 AA2 2 LEU A 4 ? GLU A 15 ? LEU A 413 GLU A 424 AA2 3 ARG A 106 ? CYS A 115 ? ARG A 515 CYS A 524 AA2 4 GLY A 94 ? GLU A 101 ? GLY A 503 GLU A 510 AA3 1 GLN A 36 ? ARG A 39 ? GLN A 445 ARG A 448 AA3 2 ALA A 27 ? PHE A 33 ? ALA A 436 PHE A 442 AA3 3 LEU A 68 ? ASP A 74 ? LEU A 477 ASP A 483 AA3 4 ASP A 82 ? ARG A 89 ? ASP A 491 ARG A 498 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O TRP A 51 ? O TRP A 460 N PHE A 12 ? N PHE A 421 AA1 2 3 N VAL A 9 ? N VAL A 418 O MET A 55 ? O MET A 464 AA2 1 2 O TRP A 51 ? O TRP A 460 N PHE A 12 ? N PHE A 421 AA2 2 3 N ARG A 13 ? N ARG A 422 O LYS A 108 ? O LYS A 517 AA2 3 4 O PHE A 109 ? O PHE A 518 N VAL A 98 ? N VAL A 507 AA3 1 2 O PHE A 38 ? O PHE A 447 N VAL A 31 ? N VAL A 440 AA3 2 3 N TYR A 28 ? N TYR A 437 O TRP A 73 ? O TRP A 482 AA3 3 4 N LEU A 68 ? N LEU A 477 O ARG A 89 ? O ARG A 498 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id CA _struct_site.pdbx_auth_seq_id 601 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 6 _struct_site.details 'binding site for residue CA A 601' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 ASP A 76 ? ASP A 485 . ? 1_555 ? 2 AC1 6 ALA A 79 ? ALA A 488 . ? 1_555 ? 3 AC1 6 ASP A 81 ? ASP A 490 . ? 1_555 ? 4 AC1 6 HOH C . ? HOH A 771 . ? 1_555 ? 5 AC1 6 HOH C . ? HOH A 774 . ? 1_555 ? 6 AC1 6 HOH C . ? HOH A 811 . ? 1_555 ? # _atom_sites.entry_id 4Y1S _atom_sites.fract_transf_matrix[1][1] 0.026525 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.023142 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014689 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CA N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLN 1 410 410 GLN GLN A . n A 1 2 ARG 2 411 411 ARG ARG A . n A 1 3 GLY 3 412 412 GLY GLY A . n A 1 4 LEU 4 413 413 LEU LEU A . n A 1 5 ALA 5 414 414 ALA ALA A . n A 1 6 HIS 6 415 415 HIS HIS A . n A 1 7 LEU 7 416 416 LEU LEU A . n A 1 8 VAL 8 417 417 VAL VAL A . n A 1 9 VAL 9 418 418 VAL VAL A . n A 1 10 SER 10 419 419 SER SER A . n A 1 11 ASN 11 420 420 ASN ASN A . n A 1 12 PHE 12 421 421 PHE PHE A . n A 1 13 ARG 13 422 422 ARG ARG A . n A 1 14 ALA 14 423 423 ALA ALA A . n A 1 15 GLU 15 424 424 GLU GLU A . n A 1 16 HIS 16 425 425 HIS HIS A . n A 1 17 LEU 17 426 426 LEU LEU A . n A 1 18 ALA 18 427 427 ALA ALA A . n A 1 19 GLY 19 428 ? ? ? A . n A 1 20 ASP 20 429 ? ? ? A . n A 1 21 ALA 21 430 ? ? ? A . n A 1 22 THR 22 431 ? ? ? A . n A 1 23 THR 23 432 432 THR THR A . n A 1 24 ALA 24 433 433 ALA ALA A . n A 1 25 THR 25 434 434 THR THR A . n A 1 26 ASP 26 435 435 ASP ASP A . n A 1 27 ALA 27 436 436 ALA ALA A . n A 1 28 TYR 28 437 437 TYR TYR A . n A 1 29 LEU 29 438 438 LEU LEU A . n A 1 30 LYS 30 439 439 LYS LYS A . n A 1 31 VAL 31 440 440 VAL VAL A . n A 1 32 PHE 32 441 441 PHE PHE A . n A 1 33 PHE 33 442 442 PHE PHE A . n A 1 34 GLY 34 443 443 GLY GLY A . n A 1 35 GLY 35 444 444 GLY GLY A . n A 1 36 GLN 36 445 445 GLN GLN A . n A 1 37 GLU 37 446 446 GLU GLU A . n A 1 38 PHE 38 447 447 PHE PHE A . n A 1 39 ARG 39 448 448 ARG ARG A . n A 1 40 THR 40 449 449 THR THR A . n A 1 41 GLY 41 450 450 GLY GLY A . n A 1 42 VAL 42 451 451 VAL VAL A . n A 1 43 VAL 43 452 452 VAL VAL A . n A 1 44 TRP 44 453 453 TRP TRP A . n A 1 45 ASN 45 454 454 ASN ASN A . n A 1 46 ASN 46 455 455 ASN ASN A . n A 1 47 ASN 47 456 456 ASN ASN A . n A 1 48 ASN 48 457 457 ASN ASN A . n A 1 49 PRO 49 458 458 PRO PRO A . n A 1 50 ARG 50 459 459 ARG ARG A . n A 1 51 TRP 51 460 460 TRP TRP A . n A 1 52 THR 52 461 461 THR THR A . n A 1 53 ASP 53 462 462 ASP ASP A . n A 1 54 LYS 54 463 463 LYS LYS A . n A 1 55 MET 55 464 464 MET MET A . n A 1 56 ASP 56 465 465 ASP ASP A . n A 1 57 PHE 57 466 466 PHE PHE A . n A 1 58 GLU 58 467 467 GLU GLU A . n A 1 59 ASN 59 468 468 ASN ASN A . n A 1 60 VAL 60 469 469 VAL VAL A . n A 1 61 LEU 61 470 470 LEU LEU A . n A 1 62 LEU 62 471 471 LEU LEU A . n A 1 63 SER 63 472 472 SER SER A . n A 1 64 THR 64 473 473 THR THR A . n A 1 65 GLY 65 474 474 GLY GLY A . n A 1 66 GLY 66 475 475 GLY GLY A . n A 1 67 PRO 67 476 476 PRO PRO A . n A 1 68 LEU 68 477 477 LEU LEU A . n A 1 69 ARG 69 478 478 ARG ARG A . n A 1 70 VAL 70 479 479 VAL VAL A . n A 1 71 GLN 71 480 480 GLN GLN A . n A 1 72 VAL 72 481 481 VAL VAL A . n A 1 73 TRP 73 482 482 TRP TRP A . n A 1 74 ASP 74 483 483 ASP ASP A . n A 1 75 ALA 75 484 484 ALA ALA A . n A 1 76 ASP 76 485 485 ASP ASP A . n A 1 77 ALA 77 486 486 ALA ALA A . n A 1 78 GLY 78 487 487 GLY GLY A . n A 1 79 ALA 79 488 488 ALA ALA A . n A 1 80 ASP 80 489 489 ASP ASP A . n A 1 81 ASP 81 490 490 ASP ASP A . n A 1 82 ASP 82 491 491 ASP ASP A . n A 1 83 LEU 83 492 492 LEU LEU A . n A 1 84 LEU 84 493 493 LEU LEU A . n A 1 85 GLY 85 494 494 GLY GLY A . n A 1 86 SER 86 495 495 SER SER A . n A 1 87 CYS 87 496 496 CYS CYS A . n A 1 88 ASP 88 497 497 ASP ASP A . n A 1 89 ARG 89 498 498 ARG ARG A . n A 1 90 SER 90 499 499 SER SER A . n A 1 91 PRO 91 500 500 PRO PRO A . n A 1 92 HIS 92 501 501 HIS HIS A . n A 1 93 SER 93 502 502 SER SER A . n A 1 94 GLY 94 503 503 GLY GLY A . n A 1 95 PHE 95 504 504 PHE PHE A . n A 1 96 HIS 96 505 505 HIS HIS A . n A 1 97 GLU 97 506 506 GLU GLU A . n A 1 98 VAL 98 507 507 VAL VAL A . n A 1 99 THR 99 508 508 THR THR A . n A 1 100 CYS 100 509 509 CYS CYS A . n A 1 101 GLU 101 510 510 GLU GLU A . n A 1 102 LEU 102 511 511 LEU LEU A . n A 1 103 ASN 103 512 512 ASN ASN A . n A 1 104 HIS 104 513 513 HIS HIS A . n A 1 105 GLY 105 514 514 GLY GLY A . n A 1 106 ARG 106 515 515 ARG ARG A . n A 1 107 VAL 107 516 516 VAL VAL A . n A 1 108 LYS 108 517 517 LYS LYS A . n A 1 109 PHE 109 518 518 PHE PHE A . n A 1 110 SER 110 519 519 SER SER A . n A 1 111 TYR 111 520 520 TYR TYR A . n A 1 112 HIS 112 521 521 HIS HIS A . n A 1 113 ALA 113 522 522 ALA ALA A . n A 1 114 LYS 114 523 523 LYS LYS A . n A 1 115 CYS 115 524 524 CYS CYS A . n A 1 116 LEU 116 525 525 LEU LEU A . n A 1 117 PRO 117 526 526 PRO PRO A . n A 1 118 HIS 118 527 527 HIS HIS A . n A 1 119 LEU 119 528 528 LEU LEU A . n A 1 120 THR 120 529 529 THR THR A . n A 1 121 GLY 121 530 530 GLY GLY A . n A 1 122 GLY 122 531 531 GLY GLY A . n A 1 123 THR 123 532 532 THR THR A . n A 1 124 CYS 124 533 533 CYS CYS A . n A 1 125 LEU 125 534 534 LEU LEU A . n A 1 126 GLU 126 535 535 GLU GLU A . n A 1 127 GLY 127 536 ? ? ? A . n A 1 128 GLN 128 537 ? ? ? A . n A 1 129 ALA 129 538 ? ? ? A . n A 1 130 GLY 130 539 ? ? ? A . n A 1 131 GLN 131 540 ? ? ? A . n A 1 132 HIS 132 541 ? ? ? A . n A 1 133 HIS 133 542 ? ? ? A . n A 1 134 HIS 134 543 ? ? ? A . n A 1 135 HIS 135 544 ? ? ? A . n A 1 136 HIS 136 545 ? ? ? A . n A 1 137 HIS 137 546 ? ? ? A . n A 1 138 GLY 138 547 ? ? ? A . n A 1 139 ALA 139 548 ? ? ? A . n A 1 140 TYR 140 549 ? ? ? A . n A 1 141 PRO 141 550 ? ? ? A . n A 1 142 TYR 142 551 ? ? ? A . n A 1 143 ASP 143 552 ? ? ? A . n A 1 144 VAL 144 553 ? ? ? A . n A 1 145 PRO 145 554 ? ? ? A . n A 1 146 ASP 146 555 ? ? ? A . n A 1 147 TYR 147 556 ? ? ? A . n A 1 148 ALA 148 557 ? ? ? A . n A 1 149 SER 149 558 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA 1 601 1 CA CA A . C 3 HOH 1 701 120 HOH HOH A . C 3 HOH 2 702 76 HOH HOH A . C 3 HOH 3 703 85 HOH HOH A . C 3 HOH 4 704 40 HOH HOH A . C 3 HOH 5 705 1 HOH HOH A . C 3 HOH 6 706 96 HOH HOH A . C 3 HOH 7 707 106 HOH HOH A . C 3 HOH 8 708 73 HOH HOH A . C 3 HOH 9 709 20 HOH HOH A . C 3 HOH 10 710 51 HOH HOH A . C 3 HOH 11 711 65 HOH HOH A . C 3 HOH 12 712 29 HOH HOH A . C 3 HOH 13 713 105 HOH HOH A . C 3 HOH 14 714 46 HOH HOH A . C 3 HOH 15 715 57 HOH HOH A . C 3 HOH 16 716 35 HOH HOH A . C 3 HOH 17 717 71 HOH HOH A . C 3 HOH 18 718 115 HOH HOH A . C 3 HOH 19 719 124 HOH HOH A . C 3 HOH 20 720 24 HOH HOH A . C 3 HOH 21 721 7 HOH HOH A . C 3 HOH 22 722 103 HOH HOH A . C 3 HOH 23 723 12 HOH HOH A . C 3 HOH 24 724 94 HOH HOH A . C 3 HOH 25 725 89 HOH HOH A . C 3 HOH 26 726 5 HOH HOH A . C 3 HOH 27 727 2 HOH HOH A . C 3 HOH 28 728 14 HOH HOH A . C 3 HOH 29 729 9 HOH HOH A . C 3 HOH 30 730 81 HOH HOH A . C 3 HOH 31 731 108 HOH HOH A . C 3 HOH 32 732 10 HOH HOH A . C 3 HOH 33 733 109 HOH HOH A . C 3 HOH 34 734 62 HOH HOH A . C 3 HOH 35 735 92 HOH HOH A . C 3 HOH 36 736 13 HOH HOH A . C 3 HOH 37 737 45 HOH HOH A . C 3 HOH 38 738 15 HOH HOH A . C 3 HOH 39 739 33 HOH HOH A . C 3 HOH 40 740 55 HOH HOH A . C 3 HOH 41 741 53 HOH HOH A . C 3 HOH 42 742 6 HOH HOH A . C 3 HOH 43 743 39 HOH HOH A . C 3 HOH 44 744 22 HOH HOH A . C 3 HOH 45 745 66 HOH HOH A . C 3 HOH 46 746 90 HOH HOH A . C 3 HOH 47 747 42 HOH HOH A . C 3 HOH 48 748 68 HOH HOH A . C 3 HOH 49 749 16 HOH HOH A . C 3 HOH 50 750 61 HOH HOH A . C 3 HOH 51 751 44 HOH HOH A . C 3 HOH 52 752 8 HOH HOH A . C 3 HOH 53 753 43 HOH HOH A . C 3 HOH 54 754 18 HOH HOH A . C 3 HOH 55 755 131 HOH HOH A . C 3 HOH 56 756 127 HOH HOH A . C 3 HOH 57 757 122 HOH HOH A . C 3 HOH 58 758 77 HOH HOH A . C 3 HOH 59 759 27 HOH HOH A . C 3 HOH 60 760 83 HOH HOH A . C 3 HOH 61 761 128 HOH HOH A . C 3 HOH 62 762 31 HOH HOH A . C 3 HOH 63 763 11 HOH HOH A . C 3 HOH 64 764 82 HOH HOH A . C 3 HOH 65 765 54 HOH HOH A . C 3 HOH 66 766 60 HOH HOH A . C 3 HOH 67 767 64 HOH HOH A . C 3 HOH 68 768 118 HOH HOH A . C 3 HOH 69 769 28 HOH HOH A . C 3 HOH 70 770 110 HOH HOH A . C 3 HOH 71 771 63 HOH HOH A . C 3 HOH 72 772 88 HOH HOH A . C 3 HOH 73 773 130 HOH HOH A . C 3 HOH 74 774 48 HOH HOH A . C 3 HOH 75 775 111 HOH HOH A . C 3 HOH 76 776 104 HOH HOH A . C 3 HOH 77 777 123 HOH HOH A . C 3 HOH 78 778 97 HOH HOH A . C 3 HOH 79 779 78 HOH HOH A . C 3 HOH 80 780 87 HOH HOH A . C 3 HOH 81 781 114 HOH HOH A . C 3 HOH 82 782 95 HOH HOH A . C 3 HOH 83 783 67 HOH HOH A . C 3 HOH 84 784 21 HOH HOH A . C 3 HOH 85 785 70 HOH HOH A . C 3 HOH 86 786 75 HOH HOH A . C 3 HOH 87 787 86 HOH HOH A . C 3 HOH 88 788 32 HOH HOH A . C 3 HOH 89 789 74 HOH HOH A . C 3 HOH 90 790 119 HOH HOH A . C 3 HOH 91 791 112 HOH HOH A . C 3 HOH 92 792 3 HOH HOH A . C 3 HOH 93 793 4 HOH HOH A . C 3 HOH 94 794 17 HOH HOH A . C 3 HOH 95 795 19 HOH HOH A . C 3 HOH 96 796 23 HOH HOH A . C 3 HOH 97 797 25 HOH HOH A . C 3 HOH 98 798 26 HOH HOH A . C 3 HOH 99 799 30 HOH HOH A . C 3 HOH 100 800 34 HOH HOH A . C 3 HOH 101 801 36 HOH HOH A . C 3 HOH 102 802 37 HOH HOH A . C 3 HOH 103 803 38 HOH HOH A . C 3 HOH 104 804 41 HOH HOH A . C 3 HOH 105 805 47 HOH HOH A . C 3 HOH 106 806 49 HOH HOH A . C 3 HOH 107 807 50 HOH HOH A . C 3 HOH 108 808 52 HOH HOH A . C 3 HOH 109 809 56 HOH HOH A . C 3 HOH 110 810 58 HOH HOH A . C 3 HOH 111 811 59 HOH HOH A . C 3 HOH 112 812 69 HOH HOH A . C 3 HOH 113 813 72 HOH HOH A . C 3 HOH 114 814 79 HOH HOH A . C 3 HOH 115 815 80 HOH HOH A . C 3 HOH 116 816 84 HOH HOH A . C 3 HOH 117 817 91 HOH HOH A . C 3 HOH 118 818 93 HOH HOH A . C 3 HOH 119 819 98 HOH HOH A . C 3 HOH 120 820 99 HOH HOH A . C 3 HOH 121 821 100 HOH HOH A . C 3 HOH 122 822 101 HOH HOH A . C 3 HOH 123 823 102 HOH HOH A . C 3 HOH 124 824 107 HOH HOH A . C 3 HOH 125 825 113 HOH HOH A . C 3 HOH 126 826 116 HOH HOH A . C 3 HOH 127 827 117 HOH HOH A . C 3 HOH 128 828 121 HOH HOH A . C 3 HOH 129 829 125 HOH HOH A . C 3 HOH 130 830 126 HOH HOH A . C 3 HOH 131 831 129 HOH HOH A . C 3 HOH 132 832 132 HOH HOH A . C 3 HOH 133 833 133 HOH HOH A . C 3 HOH 134 834 134 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A ASP 76 ? A ASP 485 ? 1_555 CA ? B CA . ? A CA 601 ? 1_555 O ? A ALA 79 ? A ALA 488 ? 1_555 72.0 ? 2 O ? A ASP 76 ? A ASP 485 ? 1_555 CA ? B CA . ? A CA 601 ? 1_555 OD1 ? A ASP 81 ? A ASP 490 ? 1_555 94.1 ? 3 O ? A ALA 79 ? A ALA 488 ? 1_555 CA ? B CA . ? A CA 601 ? 1_555 OD1 ? A ASP 81 ? A ASP 490 ? 1_555 110.6 ? 4 O ? A ASP 76 ? A ASP 485 ? 1_555 CA ? B CA . ? A CA 601 ? 1_555 O ? C HOH . ? A HOH 771 ? 1_555 90.4 ? 5 O ? A ALA 79 ? A ALA 488 ? 1_555 CA ? B CA . ? A CA 601 ? 1_555 O ? C HOH . ? A HOH 771 ? 1_555 83.0 ? 6 OD1 ? A ASP 81 ? A ASP 490 ? 1_555 CA ? B CA . ? A CA 601 ? 1_555 O ? C HOH . ? A HOH 771 ? 1_555 166.4 ? 7 O ? A ASP 76 ? A ASP 485 ? 1_555 CA ? B CA . ? A CA 601 ? 1_555 O ? C HOH . ? A HOH 774 ? 1_555 166.4 ? 8 O ? A ALA 79 ? A ALA 488 ? 1_555 CA ? B CA . ? A CA 601 ? 1_555 O ? C HOH . ? A HOH 774 ? 1_555 95.3 ? 9 OD1 ? A ASP 81 ? A ASP 490 ? 1_555 CA ? B CA . ? A CA 601 ? 1_555 O ? C HOH . ? A HOH 774 ? 1_555 85.7 ? 10 O ? C HOH . ? A HOH 771 ? 1_555 CA ? B CA . ? A CA 601 ? 1_555 O ? C HOH . ? A HOH 774 ? 1_555 93.0 ? 11 O ? A ASP 76 ? A ASP 485 ? 1_555 CA ? B CA . ? A CA 601 ? 1_555 O ? C HOH . ? A HOH 811 ? 1_555 86.4 ? 12 O ? A ALA 79 ? A ALA 488 ? 1_555 CA ? B CA . ? A CA 601 ? 1_555 O ? C HOH . ? A HOH 811 ? 1_555 156.4 ? 13 OD1 ? A ASP 81 ? A ASP 490 ? 1_555 CA ? B CA . ? A CA 601 ? 1_555 O ? C HOH . ? A HOH 811 ? 1_555 79.5 ? 14 O ? C HOH . ? A HOH 771 ? 1_555 CA ? B CA . ? A CA 601 ? 1_555 O ? C HOH . ? A HOH 811 ? 1_555 88.0 ? 15 O ? C HOH . ? A HOH 774 ? 1_555 CA ? B CA . ? A CA 601 ? 1_555 O ? C HOH . ? A HOH 811 ? 1_555 106.9 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-09-02 2 'Structure model' 1 1 2015-09-09 3 'Structure model' 1 2 2015-10-28 4 'Structure model' 1 3 2017-12-13 5 'Structure model' 1 4 2023-09-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Source and taxonomy' 7 5 'Structure model' 'Data collection' 8 5 'Structure model' 'Database references' 9 5 'Structure model' 'Derived calculations' 10 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' citation 2 4 'Structure model' diffrn_source 3 4 'Structure model' entity_src_gen 4 4 'Structure model' pdbx_struct_oper_list 5 5 'Structure model' chem_comp_atom 6 5 'Structure model' chem_comp_bond 7 5 'Structure model' database_2 8 5 'Structure model' pdbx_initial_refinement_model 9 5 'Structure model' pdbx_struct_conn_angle 10 5 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_citation.journal_id_CSD' 2 4 'Structure model' '_diffrn_source.pdbx_synchrotron_site' 3 4 'Structure model' '_entity_src_gen.gene_src_common_name' 4 4 'Structure model' '_entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id' 5 4 'Structure model' '_entity_src_gen.pdbx_gene_src_scientific_name' 6 4 'Structure model' '_pdbx_struct_oper_list.symmetry_operation' 7 5 'Structure model' '_database_2.pdbx_DOI' 8 5 'Structure model' '_database_2.pdbx_database_accession' 9 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 10 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 11 5 'Structure model' '_pdbx_struct_conn_angle.value' 12 5 'Structure model' '_struct_conn.pdbx_dist_value' 13 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'X-RAY DIFFRACTION' ? refined -19.7332 8.7335 -16.5774 0.0537 ? -0.0281 ? 0.0046 ? 0.0484 ? 0.0326 ? 0.0768 ? 3.5305 ? -0.6353 ? 1.1527 ? 2.1238 ? -0.0673 ? 2.4176 ? -0.2214 ? 0.0138 ? 0.1535 ? -0.0410 ? 0.0680 ? 0.1694 ? -0.0566 ? -0.2098 ? 0.0022 ? 2 'X-RAY DIFFRACTION' ? refined 2.7360 6.9463 -4.2715 0.0851 ? 0.0040 ? -0.0681 ? 0.1378 ? 0.0258 ? 0.1078 ? 7.7765 ? 0.4835 ? 1.3974 ? 4.2728 ? 3.1179 ? 5.9313 ? -0.0438 ? -0.0036 ? -0.4262 ? 0.4104 ? -0.2569 ? -0.3992 ? 0.5933 ? 0.3694 ? -0.1158 ? 3 'X-RAY DIFFRACTION' ? refined -10.8630 14.1571 -11.6832 0.0753 ? -0.0028 ? -0.0174 ? 0.0483 ? 0.0067 ? 0.0492 ? 3.0653 ? -0.5616 ? 1.9324 ? 1.3319 ? -0.4898 ? 2.7404 ? -0.1481 ? 0.0242 ? 0.1405 ? 0.1034 ? -0.0024 ? 0.0190 ? -0.0700 ? 0.0830 ? 0.1299 ? 4 'X-RAY DIFFRACTION' ? refined -9.2892 10.2349 -20.5013 0.0567 ? -0.0110 ? 0.0028 ? 0.1450 ? 0.0288 ? 0.0653 ? 1.1227 ? -0.0840 ? -0.6176 ? 2.8598 ? -0.0010 ? 1.6837 ? -0.0737 ? 0.6121 ? 0.0777 ? -0.0815 ? 0.0187 ? 0.2071 ? 0.0399 ? 0.2175 ? 0.0713 ? 5 'X-RAY DIFFRACTION' ? refined 6.1624 19.3519 -10.4362 0.1517 ? -0.0828 ? -0.0571 ? 0.2693 ? 0.0864 ? 0.1717 ? 6.3387 ? 3.9271 ? 0.0373 ? 2.5486 ? -0.0989 ? 0.1264 ? 0.1073 ? -0.4255 ? 0.3059 ? 0.2391 ? -0.4941 ? -0.2026 ? -0.5783 ? 0.7016 ? 0.1523 ? 6 'X-RAY DIFFRACTION' ? refined -16.1336 3.7440 -17.9231 0.0769 ? 0.0135 ? -0.0092 ? 0.0671 ? -0.0077 ? 0.0921 ? 3.4024 ? 0.5894 ? 1.7257 ? 1.3381 ? 0.1473 ? 1.9071 ? -0.0073 ? 0.1038 ? -0.0608 ? -0.0888 ? 0.0093 ? 0.0841 ? 0.0719 ? 0.0049 ? -0.0260 ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 410 through 424 ) ; 2 'X-RAY DIFFRACTION' 2 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 425 through 435 ) ; 3 'X-RAY DIFFRACTION' 3 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 436 through 470 ) ; 4 'X-RAY DIFFRACTION' 4 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 471 through 483 ) ; 5 'X-RAY DIFFRACTION' 5 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 484 through 490 ) ; 6 'X-RAY DIFFRACTION' 6 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 491 through 535 ) ; # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(phenix.refine: 1.9_1692)' 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data collection' ? ? ? ? ? ? ? ? ? ? ? Blu-Ice ? ? ? . 3 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? SCALA ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 5 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 722 ? ? O A HOH 765 ? ? 1.91 2 1 O A HOH 815 ? ? O A HOH 816 ? ? 2.00 3 1 O A HOH 707 ? ? O A HOH 766 ? ? 2.06 4 1 O A HOH 757 ? ? O A HOH 771 ? ? 2.16 5 1 O A HOH 825 ? ? O A HOH 832 ? ? 2.17 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O A HOH 760 ? ? 1_555 O A HOH 787 ? ? 1_455 1.93 2 1 O A HOH 777 ? ? 1_555 O A HOH 786 ? ? 3_554 2.01 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 NE _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ARG _pdbx_validate_rmsd_angle.auth_seq_id_1 422 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CZ _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 ARG _pdbx_validate_rmsd_angle.auth_seq_id_2 422 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 NH2 _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 ARG _pdbx_validate_rmsd_angle.auth_seq_id_3 422 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 117.16 _pdbx_validate_rmsd_angle.angle_target_value 120.30 _pdbx_validate_rmsd_angle.angle_deviation -3.14 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.50 _pdbx_validate_rmsd_angle.linker_flag N # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id GLU _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 467 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi 52.14 _pdbx_validate_torsion.psi -135.32 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 428 ? A GLY 19 2 1 Y 1 A ASP 429 ? A ASP 20 3 1 Y 1 A ALA 430 ? A ALA 21 4 1 Y 1 A THR 431 ? A THR 22 5 1 Y 1 A GLY 536 ? A GLY 127 6 1 Y 1 A GLN 537 ? A GLN 128 7 1 Y 1 A ALA 538 ? A ALA 129 8 1 Y 1 A GLY 539 ? A GLY 130 9 1 Y 1 A GLN 540 ? A GLN 131 10 1 Y 1 A HIS 541 ? A HIS 132 11 1 Y 1 A HIS 542 ? A HIS 133 12 1 Y 1 A HIS 543 ? A HIS 134 13 1 Y 1 A HIS 544 ? A HIS 135 14 1 Y 1 A HIS 545 ? A HIS 136 15 1 Y 1 A HIS 546 ? A HIS 137 16 1 Y 1 A GLY 547 ? A GLY 138 17 1 Y 1 A ALA 548 ? A ALA 139 18 1 Y 1 A TYR 549 ? A TYR 140 19 1 Y 1 A PRO 550 ? A PRO 141 20 1 Y 1 A TYR 551 ? A TYR 142 21 1 Y 1 A ASP 552 ? A ASP 143 22 1 Y 1 A VAL 553 ? A VAL 144 23 1 Y 1 A PRO 554 ? A PRO 145 24 1 Y 1 A ASP 555 ? A ASP 146 25 1 Y 1 A TYR 556 ? A TYR 147 26 1 Y 1 A ALA 557 ? A ALA 148 27 1 Y 1 A SER 558 ? A SER 149 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CA CA CA N N 74 CYS N N N N 75 CYS CA C N R 76 CYS C C N N 77 CYS O O N N 78 CYS CB C N N 79 CYS SG S N N 80 CYS OXT O N N 81 CYS H H N N 82 CYS H2 H N N 83 CYS HA H N N 84 CYS HB2 H N N 85 CYS HB3 H N N 86 CYS HG H N N 87 CYS HXT H N N 88 GLN N N N N 89 GLN CA C N S 90 GLN C C N N 91 GLN O O N N 92 GLN CB C N N 93 GLN CG C N N 94 GLN CD C N N 95 GLN OE1 O N N 96 GLN NE2 N N N 97 GLN OXT O N N 98 GLN H H N N 99 GLN H2 H N N 100 GLN HA H N N 101 GLN HB2 H N N 102 GLN HB3 H N N 103 GLN HG2 H N N 104 GLN HG3 H N N 105 GLN HE21 H N N 106 GLN HE22 H N N 107 GLN HXT H N N 108 GLU N N N N 109 GLU CA C N S 110 GLU C C N N 111 GLU O O N N 112 GLU CB C N N 113 GLU CG C N N 114 GLU CD C N N 115 GLU OE1 O N N 116 GLU OE2 O N N 117 GLU OXT O N N 118 GLU H H N N 119 GLU H2 H N N 120 GLU HA H N N 121 GLU HB2 H N N 122 GLU HB3 H N N 123 GLU HG2 H N N 124 GLU HG3 H N N 125 GLU HE2 H N N 126 GLU HXT H N N 127 GLY N N N N 128 GLY CA C N N 129 GLY C C N N 130 GLY O O N N 131 GLY OXT O N N 132 GLY H H N N 133 GLY H2 H N N 134 GLY HA2 H N N 135 GLY HA3 H N N 136 GLY HXT H N N 137 HIS N N N N 138 HIS CA C N S 139 HIS C C N N 140 HIS O O N N 141 HIS CB C N N 142 HIS CG C Y N 143 HIS ND1 N Y N 144 HIS CD2 C Y N 145 HIS CE1 C Y N 146 HIS NE2 N Y N 147 HIS OXT O N N 148 HIS H H N N 149 HIS H2 H N N 150 HIS HA H N N 151 HIS HB2 H N N 152 HIS HB3 H N N 153 HIS HD1 H N N 154 HIS HD2 H N N 155 HIS HE1 H N N 156 HIS HE2 H N N 157 HIS HXT H N N 158 HOH O O N N 159 HOH H1 H N N 160 HOH H2 H N N 161 LEU N N N N 162 LEU CA C N S 163 LEU C C N N 164 LEU O O N N 165 LEU CB C N N 166 LEU CG C N N 167 LEU CD1 C N N 168 LEU CD2 C N N 169 LEU OXT O N N 170 LEU H H N N 171 LEU H2 H N N 172 LEU HA H N N 173 LEU HB2 H N N 174 LEU HB3 H N N 175 LEU HG H N N 176 LEU HD11 H N N 177 LEU HD12 H N N 178 LEU HD13 H N N 179 LEU HD21 H N N 180 LEU HD22 H N N 181 LEU HD23 H N N 182 LEU HXT H N N 183 LYS N N N N 184 LYS CA C N S 185 LYS C C N N 186 LYS O O N N 187 LYS CB C N N 188 LYS CG C N N 189 LYS CD C N N 190 LYS CE C N N 191 LYS NZ N N N 192 LYS OXT O N N 193 LYS H H N N 194 LYS H2 H N N 195 LYS HA H N N 196 LYS HB2 H N N 197 LYS HB3 H N N 198 LYS HG2 H N N 199 LYS HG3 H N N 200 LYS HD2 H N N 201 LYS HD3 H N N 202 LYS HE2 H N N 203 LYS HE3 H N N 204 LYS HZ1 H N N 205 LYS HZ2 H N N 206 LYS HZ3 H N N 207 LYS HXT H N N 208 MET N N N N 209 MET CA C N S 210 MET C C N N 211 MET O O N N 212 MET CB C N N 213 MET CG C N N 214 MET SD S N N 215 MET CE C N N 216 MET OXT O N N 217 MET H H N N 218 MET H2 H N N 219 MET HA H N N 220 MET HB2 H N N 221 MET HB3 H N N 222 MET HG2 H N N 223 MET HG3 H N N 224 MET HE1 H N N 225 MET HE2 H N N 226 MET HE3 H N N 227 MET HXT H N N 228 PHE N N N N 229 PHE CA C N S 230 PHE C C N N 231 PHE O O N N 232 PHE CB C N N 233 PHE CG C Y N 234 PHE CD1 C Y N 235 PHE CD2 C Y N 236 PHE CE1 C Y N 237 PHE CE2 C Y N 238 PHE CZ C Y N 239 PHE OXT O N N 240 PHE H H N N 241 PHE H2 H N N 242 PHE HA H N N 243 PHE HB2 H N N 244 PHE HB3 H N N 245 PHE HD1 H N N 246 PHE HD2 H N N 247 PHE HE1 H N N 248 PHE HE2 H N N 249 PHE HZ H N N 250 PHE HXT H N N 251 PRO N N N N 252 PRO CA C N S 253 PRO C C N N 254 PRO O O N N 255 PRO CB C N N 256 PRO CG C N N 257 PRO CD C N N 258 PRO OXT O N N 259 PRO H H N N 260 PRO HA H N N 261 PRO HB2 H N N 262 PRO HB3 H N N 263 PRO HG2 H N N 264 PRO HG3 H N N 265 PRO HD2 H N N 266 PRO HD3 H N N 267 PRO HXT H N N 268 SER N N N N 269 SER CA C N S 270 SER C C N N 271 SER O O N N 272 SER CB C N N 273 SER OG O N N 274 SER OXT O N N 275 SER H H N N 276 SER H2 H N N 277 SER HA H N N 278 SER HB2 H N N 279 SER HB3 H N N 280 SER HG H N N 281 SER HXT H N N 282 THR N N N N 283 THR CA C N S 284 THR C C N N 285 THR O O N N 286 THR CB C N R 287 THR OG1 O N N 288 THR CG2 C N N 289 THR OXT O N N 290 THR H H N N 291 THR H2 H N N 292 THR HA H N N 293 THR HB H N N 294 THR HG1 H N N 295 THR HG21 H N N 296 THR HG22 H N N 297 THR HG23 H N N 298 THR HXT H N N 299 TRP N N N N 300 TRP CA C N S 301 TRP C C N N 302 TRP O O N N 303 TRP CB C N N 304 TRP CG C Y N 305 TRP CD1 C Y N 306 TRP CD2 C Y N 307 TRP NE1 N Y N 308 TRP CE2 C Y N 309 TRP CE3 C Y N 310 TRP CZ2 C Y N 311 TRP CZ3 C Y N 312 TRP CH2 C Y N 313 TRP OXT O N N 314 TRP H H N N 315 TRP H2 H N N 316 TRP HA H N N 317 TRP HB2 H N N 318 TRP HB3 H N N 319 TRP HD1 H N N 320 TRP HE1 H N N 321 TRP HE3 H N N 322 TRP HZ2 H N N 323 TRP HZ3 H N N 324 TRP HH2 H N N 325 TRP HXT H N N 326 TYR N N N N 327 TYR CA C N S 328 TYR C C N N 329 TYR O O N N 330 TYR CB C N N 331 TYR CG C Y N 332 TYR CD1 C Y N 333 TYR CD2 C Y N 334 TYR CE1 C Y N 335 TYR CE2 C Y N 336 TYR CZ C Y N 337 TYR OH O N N 338 TYR OXT O N N 339 TYR H H N N 340 TYR H2 H N N 341 TYR HA H N N 342 TYR HB2 H N N 343 TYR HB3 H N N 344 TYR HD1 H N N 345 TYR HD2 H N N 346 TYR HE1 H N N 347 TYR HE2 H N N 348 TYR HH H N N 349 TYR HXT H N N 350 VAL N N N N 351 VAL CA C N S 352 VAL C C N N 353 VAL O O N N 354 VAL CB C N N 355 VAL CG1 C N N 356 VAL CG2 C N N 357 VAL OXT O N N 358 VAL H H N N 359 VAL H2 H N N 360 VAL HA H N N 361 VAL HB H N N 362 VAL HG11 H N N 363 VAL HG12 H N N 364 VAL HG13 H N N 365 VAL HG21 H N N 366 VAL HG22 H N N 367 VAL HG23 H N N 368 VAL HXT H N N 369 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 LEU N CA sing N N 152 LEU N H sing N N 153 LEU N H2 sing N N 154 LEU CA C sing N N 155 LEU CA CB sing N N 156 LEU CA HA sing N N 157 LEU C O doub N N 158 LEU C OXT sing N N 159 LEU CB CG sing N N 160 LEU CB HB2 sing N N 161 LEU CB HB3 sing N N 162 LEU CG CD1 sing N N 163 LEU CG CD2 sing N N 164 LEU CG HG sing N N 165 LEU CD1 HD11 sing N N 166 LEU CD1 HD12 sing N N 167 LEU CD1 HD13 sing N N 168 LEU CD2 HD21 sing N N 169 LEU CD2 HD22 sing N N 170 LEU CD2 HD23 sing N N 171 LEU OXT HXT sing N N 172 LYS N CA sing N N 173 LYS N H sing N N 174 LYS N H2 sing N N 175 LYS CA C sing N N 176 LYS CA CB sing N N 177 LYS CA HA sing N N 178 LYS C O doub N N 179 LYS C OXT sing N N 180 LYS CB CG sing N N 181 LYS CB HB2 sing N N 182 LYS CB HB3 sing N N 183 LYS CG CD sing N N 184 LYS CG HG2 sing N N 185 LYS CG HG3 sing N N 186 LYS CD CE sing N N 187 LYS CD HD2 sing N N 188 LYS CD HD3 sing N N 189 LYS CE NZ sing N N 190 LYS CE HE2 sing N N 191 LYS CE HE3 sing N N 192 LYS NZ HZ1 sing N N 193 LYS NZ HZ2 sing N N 194 LYS NZ HZ3 sing N N 195 LYS OXT HXT sing N N 196 MET N CA sing N N 197 MET N H sing N N 198 MET N H2 sing N N 199 MET CA C sing N N 200 MET CA CB sing N N 201 MET CA HA sing N N 202 MET C O doub N N 203 MET C OXT sing N N 204 MET CB CG sing N N 205 MET CB HB2 sing N N 206 MET CB HB3 sing N N 207 MET CG SD sing N N 208 MET CG HG2 sing N N 209 MET CG HG3 sing N N 210 MET SD CE sing N N 211 MET CE HE1 sing N N 212 MET CE HE2 sing N N 213 MET CE HE3 sing N N 214 MET OXT HXT sing N N 215 PHE N CA sing N N 216 PHE N H sing N N 217 PHE N H2 sing N N 218 PHE CA C sing N N 219 PHE CA CB sing N N 220 PHE CA HA sing N N 221 PHE C O doub N N 222 PHE C OXT sing N N 223 PHE CB CG sing N N 224 PHE CB HB2 sing N N 225 PHE CB HB3 sing N N 226 PHE CG CD1 doub Y N 227 PHE CG CD2 sing Y N 228 PHE CD1 CE1 sing Y N 229 PHE CD1 HD1 sing N N 230 PHE CD2 CE2 doub Y N 231 PHE CD2 HD2 sing N N 232 PHE CE1 CZ doub Y N 233 PHE CE1 HE1 sing N N 234 PHE CE2 CZ sing Y N 235 PHE CE2 HE2 sing N N 236 PHE CZ HZ sing N N 237 PHE OXT HXT sing N N 238 PRO N CA sing N N 239 PRO N CD sing N N 240 PRO N H sing N N 241 PRO CA C sing N N 242 PRO CA CB sing N N 243 PRO CA HA sing N N 244 PRO C O doub N N 245 PRO C OXT sing N N 246 PRO CB CG sing N N 247 PRO CB HB2 sing N N 248 PRO CB HB3 sing N N 249 PRO CG CD sing N N 250 PRO CG HG2 sing N N 251 PRO CG HG3 sing N N 252 PRO CD HD2 sing N N 253 PRO CD HD3 sing N N 254 PRO OXT HXT sing N N 255 SER N CA sing N N 256 SER N H sing N N 257 SER N H2 sing N N 258 SER CA C sing N N 259 SER CA CB sing N N 260 SER CA HA sing N N 261 SER C O doub N N 262 SER C OXT sing N N 263 SER CB OG sing N N 264 SER CB HB2 sing N N 265 SER CB HB3 sing N N 266 SER OG HG sing N N 267 SER OXT HXT sing N N 268 THR N CA sing N N 269 THR N H sing N N 270 THR N H2 sing N N 271 THR CA C sing N N 272 THR CA CB sing N N 273 THR CA HA sing N N 274 THR C O doub N N 275 THR C OXT sing N N 276 THR CB OG1 sing N N 277 THR CB CG2 sing N N 278 THR CB HB sing N N 279 THR OG1 HG1 sing N N 280 THR CG2 HG21 sing N N 281 THR CG2 HG22 sing N N 282 THR CG2 HG23 sing N N 283 THR OXT HXT sing N N 284 TRP N CA sing N N 285 TRP N H sing N N 286 TRP N H2 sing N N 287 TRP CA C sing N N 288 TRP CA CB sing N N 289 TRP CA HA sing N N 290 TRP C O doub N N 291 TRP C OXT sing N N 292 TRP CB CG sing N N 293 TRP CB HB2 sing N N 294 TRP CB HB3 sing N N 295 TRP CG CD1 doub Y N 296 TRP CG CD2 sing Y N 297 TRP CD1 NE1 sing Y N 298 TRP CD1 HD1 sing N N 299 TRP CD2 CE2 doub Y N 300 TRP CD2 CE3 sing Y N 301 TRP NE1 CE2 sing Y N 302 TRP NE1 HE1 sing N N 303 TRP CE2 CZ2 sing Y N 304 TRP CE3 CZ3 doub Y N 305 TRP CE3 HE3 sing N N 306 TRP CZ2 CH2 doub Y N 307 TRP CZ2 HZ2 sing N N 308 TRP CZ3 CH2 sing Y N 309 TRP CZ3 HZ3 sing N N 310 TRP CH2 HH2 sing N N 311 TRP OXT HXT sing N N 312 TYR N CA sing N N 313 TYR N H sing N N 314 TYR N H2 sing N N 315 TYR CA C sing N N 316 TYR CA CB sing N N 317 TYR CA HA sing N N 318 TYR C O doub N N 319 TYR C OXT sing N N 320 TYR CB CG sing N N 321 TYR CB HB2 sing N N 322 TYR CB HB3 sing N N 323 TYR CG CD1 doub Y N 324 TYR CG CD2 sing Y N 325 TYR CD1 CE1 sing Y N 326 TYR CD1 HD1 sing N N 327 TYR CD2 CE2 doub Y N 328 TYR CD2 HD2 sing N N 329 TYR CE1 CZ doub Y N 330 TYR CE1 HE1 sing N N 331 TYR CE2 CZ sing Y N 332 TYR CE2 HE2 sing N N 333 TYR CZ OH sing N N 334 TYR OH HH sing N N 335 TYR OXT HXT sing N N 336 VAL N CA sing N N 337 VAL N H sing N N 338 VAL N H2 sing N N 339 VAL CA C sing N N 340 VAL CA CB sing N N 341 VAL CA HA sing N N 342 VAL C O doub N N 343 VAL C OXT sing N N 344 VAL CB CG1 sing N N 345 VAL CB CG2 sing N N 346 VAL CB HB sing N N 347 VAL CG1 HG11 sing N N 348 VAL CG1 HG12 sing N N 349 VAL CG1 HG13 sing N N 350 VAL CG2 HG21 sing N N 351 VAL CG2 HG22 sing N N 352 VAL CG2 HG23 sing N N 353 VAL OXT HXT sing N N 354 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CALCIUM ION' CA 3 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3NSJ _pdbx_initial_refinement_model.details ? #