HEADER HYDROLASE 11-FEB-15 4Y4W TITLE ENDOTHIAPEPSIN IN COMPLEX WITH FRAGMENT 125 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ENDOTHIAPEPSIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ASPARTATE PROTEASE; COMPND 5 EC: 3.4.23.22 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CRYPHONECTRIA PARASITICA; SOURCE 3 ORGANISM_COMMON: CHESNUT BLIGHT FUNGUS; SOURCE 4 ORGANISM_TAXID: 5116 KEYWDS FRAGMENT SCREENING, HYDROLASE, INHIBITION EXPDTA X-RAY DIFFRACTION AUTHOR J.SCHIEBEL,A.HEINE,G.KLEBE REVDAT 2 10-JAN-24 4Y4W 1 REMARK REVDAT 1 02-MAR-16 4Y4W 0 JRNL AUTH J.SCHIEBEL,A.HEINE,G.KLEBE JRNL TITL CRYSTALLOGRAPHIC FRAGMENT SCREENING OF AN ENTIRE LIBRARY JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH H.KOESTER,T.CRAAN,S.BRASS,C.HERHAUS,M.ZENTGRAF,L.NEUMANN, REMARK 1 AUTH 2 A.HEINE,G.KLEBE REMARK 1 TITL A SMALL NONRULE OF 3 COMPATIBLE FRAGMENT LIBRARY PROVIDES REMARK 1 TITL 2 HIGH HIT RATE OF ENDOTHIAPEPSIN CRYSTAL STRUCTURES WITH REMARK 1 TITL 3 VARIOUS FRAGMENT CHEMOTYPES. REMARK 1 REF J. MED. CHEM. V. 54 7784 2011 REMARK 1 REFN ISSN 1520-4804 REMARK 1 PMID 21972967 REMARK 1 DOI 10.1021/JM200642W REMARK 2 REMARK 2 RESOLUTION. 1.45 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.4_1492 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.45 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.09 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 56558 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.137 REMARK 3 R VALUE (WORKING SET) : 0.136 REMARK 3 FREE R VALUE : 0.160 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2828 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 28.0917 - 3.9346 1.00 2778 146 0.1636 0.2018 REMARK 3 2 3.9346 - 3.1243 1.00 2716 143 0.1395 0.1611 REMARK 3 3 3.1243 - 2.7298 1.00 2711 143 0.1244 0.1361 REMARK 3 4 2.7298 - 2.4803 1.00 2717 143 0.1219 0.1296 REMARK 3 5 2.4803 - 2.3026 1.00 2707 142 0.1174 0.1354 REMARK 3 6 2.3026 - 2.1669 1.00 2693 142 0.1129 0.1476 REMARK 3 7 2.1669 - 2.0585 1.00 2705 142 0.1075 0.1503 REMARK 3 8 2.0585 - 1.9689 1.00 2691 142 0.1124 0.1338 REMARK 3 9 1.9689 - 1.8931 1.00 2698 142 0.1140 0.1545 REMARK 3 10 1.8931 - 1.8278 1.00 2692 141 0.1194 0.1443 REMARK 3 11 1.8278 - 1.7706 0.99 2682 142 0.1260 0.1320 REMARK 3 12 1.7706 - 1.7200 0.99 2688 141 0.1320 0.1620 REMARK 3 13 1.7200 - 1.6748 0.99 2674 141 0.1356 0.1740 REMARK 3 14 1.6748 - 1.6339 0.99 2668 140 0.1483 0.1600 REMARK 3 15 1.6339 - 1.5968 0.99 2683 142 0.1543 0.1793 REMARK 3 16 1.5968 - 1.5628 0.99 2630 138 0.1612 0.1740 REMARK 3 17 1.5628 - 1.5315 0.99 2702 142 0.1674 0.1940 REMARK 3 18 1.5315 - 1.5026 0.98 2607 137 0.1780 0.1800 REMARK 3 19 1.5026 - 1.4758 0.99 2695 142 0.1905 0.2067 REMARK 3 20 1.4758 - 1.4508 0.97 2593 137 0.2057 0.2258 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.100 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 13.870 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 2544 REMARK 3 ANGLE : 1.231 3482 REMARK 3 CHIRALITY : 0.069 408 REMARK 3 PLANARITY : 0.007 446 REMARK 3 DIHEDRAL : 10.920 832 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 1:62) REMARK 3 ORIGIN FOR THE GROUP (A): -16.7989 -9.0762 64.3801 REMARK 3 T TENSOR REMARK 3 T11: 0.0801 T22: 0.0845 REMARK 3 T33: 0.0818 T12: -0.0064 REMARK 3 T13: 0.0051 T23: -0.0034 REMARK 3 L TENSOR REMARK 3 L11: 0.4334 L22: 0.8383 REMARK 3 L33: 1.3831 L12: 0.1647 REMARK 3 L13: 0.0172 L23: -0.0222 REMARK 3 S TENSOR REMARK 3 S11: -0.0145 S12: -0.0587 S13: 0.0433 REMARK 3 S21: 0.0777 S22: -0.0203 S23: 0.0695 REMARK 3 S31: 0.0380 S32: -0.1266 S33: 0.0316 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 63:81) REMARK 3 ORIGIN FOR THE GROUP (A): -14.0913 -2.3059 74.8647 REMARK 3 T TENSOR REMARK 3 T11: 0.1050 T22: 0.1210 REMARK 3 T33: 0.0505 T12: 0.0046 REMARK 3 T13: -0.0032 T23: -0.0061 REMARK 3 L TENSOR REMARK 3 L11: 1.4720 L22: 2.2373 REMARK 3 L33: 1.0268 L12: 0.2794 REMARK 3 L13: -0.4539 L23: 0.5407 REMARK 3 S TENSOR REMARK 3 S11: -0.0341 S12: 0.0556 S13: 0.1334 REMARK 3 S21: 0.0038 S22: 0.0225 S23: 0.0342 REMARK 3 S31: -0.0388 S32: -0.1526 S33: -0.0103 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 82:151) REMARK 3 ORIGIN FOR THE GROUP (A): -11.5624 -2.8854 68.6207 REMARK 3 T TENSOR REMARK 3 T11: 0.0856 T22: 0.0677 REMARK 3 T33: 0.0526 T12: 0.0059 REMARK 3 T13: -0.0104 T23: -0.0020 REMARK 3 L TENSOR REMARK 3 L11: 0.9477 L22: 1.0919 REMARK 3 L33: 1.4022 L12: 0.0061 REMARK 3 L13: 0.1248 L23: 0.3195 REMARK 3 S TENSOR REMARK 3 S11: -0.0427 S12: -0.0610 S13: 0.0554 REMARK 3 S21: 0.0312 S22: 0.0025 S23: -0.0032 REMARK 3 S31: -0.0249 S32: -0.0322 S33: 0.0376 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 152:190) REMARK 3 ORIGIN FOR THE GROUP (A): -2.7937 -4.7603 49.3154 REMARK 3 T TENSOR REMARK 3 T11: 0.0654 T22: 0.0715 REMARK 3 T33: 0.0941 T12: 0.0102 REMARK 3 T13: 0.0010 T23: 0.0108 REMARK 3 L TENSOR REMARK 3 L11: 0.8725 L22: 1.5017 REMARK 3 L33: 1.2375 L12: 0.5188 REMARK 3 L13: -0.0085 L23: -0.1369 REMARK 3 S TENSOR REMARK 3 S11: -0.0137 S12: 0.0259 S13: 0.0102 REMARK 3 S21: -0.0915 S22: -0.0285 S23: -0.0915 REMARK 3 S31: 0.0454 S32: 0.0587 S33: 0.0444 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN A AND RESID 191:204) REMARK 3 ORIGIN FOR THE GROUP (A): -7.3799 11.1695 49.1797 REMARK 3 T TENSOR REMARK 3 T11: 0.1040 T22: 0.0546 REMARK 3 T33: 0.1182 T12: 0.0036 REMARK 3 T13: 0.0014 T23: -0.0012 REMARK 3 L TENSOR REMARK 3 L11: 0.9465 L22: 0.6767 REMARK 3 L33: 7.3433 L12: -0.2994 REMARK 3 L13: 1.2399 L23: -1.9572 REMARK 3 S TENSOR REMARK 3 S11: 0.0136 S12: -0.0128 S13: 0.0426 REMARK 3 S21: 0.1207 S22: -0.0139 S23: -0.0586 REMARK 3 S31: -0.3872 S32: 0.0211 S33: 0.0364 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN A AND RESID 205:242) REMARK 3 ORIGIN FOR THE GROUP (A): -16.7311 11.1518 41.9889 REMARK 3 T TENSOR REMARK 3 T11: 0.0792 T22: 0.0512 REMARK 3 T33: 0.0641 T12: 0.0082 REMARK 3 T13: 0.0131 T23: -0.0031 REMARK 3 L TENSOR REMARK 3 L11: 1.1819 L22: 1.1870 REMARK 3 L33: 1.4571 L12: -0.0519 REMARK 3 L13: 0.5792 L23: -0.5557 REMARK 3 S TENSOR REMARK 3 S11: -0.0393 S12: 0.0490 S13: 0.0522 REMARK 3 S21: -0.1030 S22: -0.0167 S23: -0.0935 REMARK 3 S31: -0.0050 S32: 0.0185 S33: 0.0591 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (CHAIN A AND RESID 243:258) REMARK 3 ORIGIN FOR THE GROUP (A): -31.0610 8.3269 41.5967 REMARK 3 T TENSOR REMARK 3 T11: 0.0552 T22: 0.0842 REMARK 3 T33: 0.0727 T12: -0.0023 REMARK 3 T13: 0.0086 T23: -0.0149 REMARK 3 L TENSOR REMARK 3 L11: 3.3570 L22: 3.2146 REMARK 3 L33: 4.1739 L12: 0.9115 REMARK 3 L13: 0.7196 L23: -1.2501 REMARK 3 S TENSOR REMARK 3 S11: -0.0503 S12: -0.0918 S13: 0.2366 REMARK 3 S21: 0.1059 S22: 0.0192 S23: 0.1669 REMARK 3 S31: -0.1367 S32: -0.1150 S33: -0.0072 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: (CHAIN A AND RESID 259:330) REMARK 3 ORIGIN FOR THE GROUP (A): -14.5088 3.9874 45.2240 REMARK 3 T TENSOR REMARK 3 T11: 0.0765 T22: 0.0548 REMARK 3 T33: 0.0654 T12: -0.0002 REMARK 3 T13: 0.0085 T23: 0.0048 REMARK 3 L TENSOR REMARK 3 L11: 2.0676 L22: 0.5539 REMARK 3 L33: 0.4244 L12: -0.4672 REMARK 3 L13: 0.4878 L23: -0.1941 REMARK 3 S TENSOR REMARK 3 S11: -0.0022 S12: -0.0153 S13: -0.0269 REMARK 3 S21: 0.0058 S22: -0.0193 S23: -0.0847 REMARK 3 S31: -0.0179 S32: -0.0005 S33: 0.0155 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4Y4W COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 11-FEB-15. REMARK 100 THE DEPOSITION ID IS D_1000206801. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-JAN-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91841 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 56566 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.450 REMARK 200 RESOLUTION RANGE LOW (A) : 42.710 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 4.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.06300 REMARK 200 FOR THE DATA SET : 16.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.45 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.54 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.20 REMARK 200 R MERGE FOR SHELL (I) : 0.48500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3PCW REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 35.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.89 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M AMMONIUM ACETATE, 0.1 M SODIUM REMARK 280 ACETATE, 24-30% PEG 4000; CRYSTALS OBTAINED BY STREAK-SEEDING, REMARK 280 PH 4.6, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 36.45700 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2220 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12780 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 5.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 63 CD CE NZ REMARK 470 LYS A 68 CG CD CE NZ REMARK 470 LYS A 110 CE NZ REMARK 470 LYS A 111 CD CE NZ REMARK 470 LYS A 142 NZ REMARK 470 LYS A 149 CD CE NZ REMARK 470 LYS A 191 CD CE NZ REMARK 470 LYS A 243 NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 49 121.62 -39.33 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2643 DISTANCE = 6.09 ANGSTROMS REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 46W A 412 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 408 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 409 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 410 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 411 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 46W A 412 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 46W A 413 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3PGI RELATED DB: PDB REMARK 900 RELATED ID: 4Y35 RELATED DB: PDB REMARK 900 RELATED ID: 4Y36 RELATED DB: PDB REMARK 900 RELATED ID: 4Y37 RELATED DB: PDB REMARK 900 RELATED ID: 4Y39 RELATED DB: PDB REMARK 900 RELATED ID: 4Y3A RELATED DB: PDB REMARK 900 RELATED ID: 4Y3D RELATED DB: PDB REMARK 900 RELATED ID: 4Y3F RELATED DB: PDB REMARK 900 RELATED ID: 4Y3G RELATED DB: PDB REMARK 900 RELATED ID: 4Y3H RELATED DB: PDB REMARK 900 RELATED ID: 4Y3L RELATED DB: PDB REMARK 900 RELATED ID: 4Y3M RELATED DB: PDB REMARK 900 RELATED ID: 4Y3N RELATED DB: PDB REMARK 900 RELATED ID: 4Y3P RELATED DB: PDB REMARK 900 RELATED ID: 4Y3Q RELATED DB: PDB REMARK 900 RELATED ID: 4Y3R RELATED DB: PDB REMARK 900 RELATED ID: 4Y3S RELATED DB: PDB REMARK 900 RELATED ID: 4Y3T RELATED DB: PDB REMARK 900 RELATED ID: 4Y3W RELATED DB: PDB REMARK 900 RELATED ID: 4Y3X RELATED DB: PDB REMARK 900 RELATED ID: 4Y3Z RELATED DB: PDB REMARK 900 RELATED ID: 4Y41 RELATED DB: PDB REMARK 900 RELATED ID: 4Y43 RELATED DB: PDB REMARK 900 RELATED ID: 4Y44 RELATED DB: PDB REMARK 900 RELATED ID: 4Y45 RELATED DB: PDB REMARK 900 RELATED ID: 4Y47 RELATED DB: PDB REMARK 900 RELATED ID: 4Y4A RELATED DB: PDB REMARK 900 RELATED ID: 4Y4B RELATED DB: PDB REMARK 900 RELATED ID: 4Y4C RELATED DB: PDB REMARK 900 RELATED ID: 4Y4E RELATED DB: PDB REMARK 900 RELATED ID: 4Y4T RELATED DB: PDB REMARK 900 RELATED ID: 4Y4U RELATED DB: PDB REMARK 900 RELATED ID: 4Y4W RELATED DB: PDB REMARK 900 RELATED ID: 4Y4X RELATED DB: PDB REMARK 900 RELATED ID: 4Y4Z RELATED DB: PDB REMARK 900 RELATED ID: 4Y50 RELATED DB: PDB REMARK 900 RELATED ID: 4Y51 RELATED DB: PDB REMARK 900 RELATED ID: 4Y53 RELATED DB: PDB REMARK 900 RELATED ID: 4Y54 RELATED DB: PDB REMARK 900 RELATED ID: 4Y56 RELATED DB: PDB REMARK 900 RELATED ID: 4Y57 RELATED DB: PDB REMARK 900 RELATED ID: 4Y58 RELATED DB: PDB REMARK 900 RELATED ID: 4Y5A RELATED DB: PDB REMARK 900 RELATED ID: 4Y5B RELATED DB: PDB REMARK 900 RELATED ID: 4Y5C RELATED DB: PDB REMARK 900 RELATED ID: 4Y5E RELATED DB: PDB REMARK 900 RELATED ID: 4Y5G RELATED DB: PDB REMARK 900 RELATED ID: 4Y5K RELATED DB: PDB REMARK 900 RELATED ID: 4Y5L RELATED DB: PDB REMARK 900 RELATED ID: 4Y5M RELATED DB: PDB REMARK 900 RELATED ID: 4Y5N RELATED DB: PDB REMARK 900 RELATED ID: 4Y5P RELATED DB: PDB REMARK 900 RELATED ID: 4YCK RELATED DB: PDB REMARK 900 RELATED ID: 4YCT RELATED DB: PDB REMARK 900 RELATED ID: 4YCY RELATED DB: PDB REMARK 900 RELATED ID: 4YD3 RELATED DB: PDB REMARK 900 RELATED ID: 4YD4 RELATED DB: PDB REMARK 900 RELATED ID: 4YD5 RELATED DB: PDB REMARK 900 RELATED ID: 4YD6 RELATED DB: PDB REMARK 900 RELATED ID: 4YD7 RELATED DB: PDB REMARK 900 RELATED ID: 4Y48 RELATED DB: PDB REMARK 900 RELATED ID: 4Y4J RELATED DB: PDB REMARK 900 RELATED ID: 4Y4G RELATED DB: PDB REMARK 900 RELATED ID: 4Y4D RELATED DB: PDB REMARK 900 RELATED ID: 4Y38 RELATED DB: PDB REMARK 900 RELATED ID: 4Y3Y RELATED DB: PDB REMARK 900 RELATED ID: 4Y3J RELATED DB: PDB DBREF 4Y4W A 1 330 UNP P11838 CARP_CRYPA 90 419 SEQRES 1 A 330 SER THR GLY SER ALA THR THR THR PRO ILE ASP SER LEU SEQRES 2 A 330 ASP ASP ALA TYR ILE THR PRO VAL GLN ILE GLY THR PRO SEQRES 3 A 330 ALA GLN THR LEU ASN LEU ASP PHE ASP THR GLY SER SER SEQRES 4 A 330 ASP LEU TRP VAL PHE SER SER GLU THR THR ALA SER GLU SEQRES 5 A 330 VAL ASP GLY GLN THR ILE TYR THR PRO SER LYS SER THR SEQRES 6 A 330 THR ALA LYS LEU LEU SER GLY ALA THR TRP SER ILE SER SEQRES 7 A 330 TYR GLY ASP GLY SER SER SER SER GLY ASP VAL TYR THR SEQRES 8 A 330 ASP THR VAL SER VAL GLY GLY LEU THR VAL THR GLY GLN SEQRES 9 A 330 ALA VAL GLU SER ALA LYS LYS VAL SER SER SER PHE THR SEQRES 10 A 330 GLU ASP SER THR ILE ASP GLY LEU LEU GLY LEU ALA PHE SEQRES 11 A 330 SER THR LEU ASN THR VAL SER PRO THR GLN GLN LYS THR SEQRES 12 A 330 PHE PHE ASP ASN ALA LYS ALA SER LEU ASP SER PRO VAL SEQRES 13 A 330 PHE THR ALA ASP LEU GLY TYR HIS ALA PRO GLY THR TYR SEQRES 14 A 330 ASN PHE GLY PHE ILE ASP THR THR ALA TYR THR GLY SER SEQRES 15 A 330 ILE THR TYR THR ALA VAL SER THR LYS GLN GLY PHE TRP SEQRES 16 A 330 GLU TRP THR SER THR GLY TYR ALA VAL GLY SER GLY THR SEQRES 17 A 330 PHE LYS SER THR SER ILE ASP GLY ILE ALA ASP THR GLY SEQRES 18 A 330 THR THR LEU LEU TYR LEU PRO ALA THR VAL VAL SER ALA SEQRES 19 A 330 TYR TRP ALA GLN VAL SER GLY ALA LYS SER SER SER SER SEQRES 20 A 330 VAL GLY GLY TYR VAL PHE PRO CYS SER ALA THR LEU PRO SEQRES 21 A 330 SER PHE THR PHE GLY VAL GLY SER ALA ARG ILE VAL ILE SEQRES 22 A 330 PRO GLY ASP TYR ILE ASP PHE GLY PRO ILE SER THR GLY SEQRES 23 A 330 SER SER SER CYS PHE GLY GLY ILE GLN SER SER ALA GLY SEQRES 24 A 330 ILE GLY ILE ASN ILE PHE GLY ASP VAL ALA LEU LYS ALA SEQRES 25 A 330 ALA PHE VAL VAL PHE ASN GLY ALA THR THR PRO THR LEU SEQRES 26 A 330 GLY PHE ALA SER LYS HET DMS A 401 4 HET DMS A 402 4 HET DMS A 403 4 HET EDO A 404 4 HET EDO A 405 4 HET GOL A 406 6 HET GOL A 407 6 HET GOL A 408 6 HET PEG A 409 7 HET ACT A 410 4 HET SO4 A 411 5 HET 46W A 412 9 HET 46W A 413 10 HETNAM DMS DIMETHYL SULFOXIDE HETNAM EDO 1,2-ETHANEDIOL HETNAM GOL GLYCEROL HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM ACT ACETATE ION HETNAM SO4 SULFATE ION HETNAM 46W 4-METHYLPIPERIDINE-1-CARBOXIMIDAMIDE HETSYN EDO ETHYLENE GLYCOL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 DMS 3(C2 H6 O S) FORMUL 5 EDO 2(C2 H6 O2) FORMUL 7 GOL 3(C3 H8 O3) FORMUL 10 PEG C4 H10 O3 FORMUL 11 ACT C2 H3 O2 1- FORMUL 12 SO4 O4 S 2- FORMUL 13 46W 2(C7 H15 N3) FORMUL 15 HOH *272(H2 O) HELIX 1 AA1 THR A 49 VAL A 53 5 5 HELIX 2 AA2 THR A 60 SER A 64 5 5 HELIX 3 AA3 SER A 113 ASP A 119 1 7 HELIX 4 AA4 PHE A 130 ASN A 134 5 5 HELIX 5 AA5 THR A 143 LYS A 149 1 7 HELIX 6 AA6 ALA A 150 LEU A 152 5 3 HELIX 7 AA7 PRO A 228 ALA A 237 1 10 HELIX 8 AA8 PRO A 274 TYR A 277 5 4 HELIX 9 AA9 GLY A 306 LYS A 311 1 6 SHEET 1 AA1 9 LYS A 68 SER A 78 0 SHEET 2 AA1 9 SER A 84 VAL A 96 -1 O VAL A 89 N LEU A 70 SHEET 3 AA1 9 TYR A 17 ILE A 23 -1 N GLN A 22 O SER A 95 SHEET 4 AA1 9 GLY A 3 PRO A 9 -1 N THR A 8 O ILE A 18 SHEET 5 AA1 9 GLY A 167 PHE A 171 -1 O GLY A 167 N THR A 7 SHEET 6 AA1 9 VAL A 156 ASP A 160 -1 N THR A 158 O ASN A 170 SHEET 7 AA1 9 PHE A 314 ASN A 318 -1 O PHE A 317 N PHE A 157 SHEET 8 AA1 9 THR A 324 ALA A 328 -1 O GLY A 326 N VAL A 316 SHEET 9 AA1 9 THR A 184 ALA A 187 -1 N THR A 184 O PHE A 327 SHEET 1 AA213 LYS A 68 SER A 78 0 SHEET 2 AA213 SER A 84 VAL A 96 -1 O VAL A 89 N LEU A 70 SHEET 3 AA213 LEU A 99 VAL A 112 -1 O VAL A 106 N TYR A 90 SHEET 4 AA213 LEU A 41 VAL A 43 1 N LEU A 41 O GLU A 107 SHEET 5 AA213 GLY A 124 GLY A 127 -1 O LEU A 125 N TRP A 42 SHEET 6 AA213 GLN A 28 ASP A 35 1 N ASP A 35 O LEU A 126 SHEET 7 AA213 TYR A 17 ILE A 23 -1 N VAL A 21 O LEU A 30 SHEET 8 AA213 GLY A 3 PRO A 9 -1 N THR A 8 O ILE A 18 SHEET 9 AA213 GLY A 167 PHE A 171 -1 O GLY A 167 N THR A 7 SHEET 10 AA213 VAL A 156 ASP A 160 -1 N THR A 158 O ASN A 170 SHEET 11 AA213 PHE A 314 ASN A 318 -1 O PHE A 317 N PHE A 157 SHEET 12 AA213 THR A 324 ALA A 328 -1 O GLY A 326 N VAL A 316 SHEET 13 AA213 THR A 184 ALA A 187 -1 N THR A 184 O PHE A 327 SHEET 1 AA3 7 ALA A 269 ILE A 273 0 SHEET 2 AA3 7 PHE A 262 VAL A 266 -1 N PHE A 262 O ILE A 273 SHEET 3 AA3 7 GLU A 196 VAL A 204 -1 N ALA A 203 O THR A 263 SHEET 4 AA3 7 LYS A 210 ALA A 218 -1 O LYS A 210 N TYR A 202 SHEET 5 AA3 7 ASN A 303 PHE A 305 1 O PHE A 305 N ILE A 217 SHEET 6 AA3 7 LEU A 225 LEU A 227 -1 N TYR A 226 O ILE A 304 SHEET 7 AA3 7 ILE A 294 SER A 296 1 O GLN A 295 N LEU A 225 SHEET 1 AA4 4 LYS A 243 SER A 245 0 SHEET 2 AA4 4 GLY A 250 PRO A 254 -1 O GLY A 250 N SER A 245 SHEET 3 AA4 4 SER A 289 GLY A 292 -1 O CYS A 290 N PHE A 253 SHEET 4 AA4 4 ASP A 279 PRO A 282 -1 N GLY A 281 O PHE A 291 SSBOND 1 CYS A 255 CYS A 290 1555 1555 2.04 CISPEP 1 THR A 25 PRO A 26 0 -7.56 CISPEP 2 SER A 137 PRO A 138 0 6.81 SITE 1 AC1 5 GLY A 221 THR A 222 THR A 223 46W A 413 SITE 2 AC1 5 HOH A 629 SITE 1 AC2 3 ALA A 237 GLN A 238 SER A 240 SITE 1 AC3 3 SER A 233 ALA A 237 HOH A2198 SITE 1 AC4 1 ASP A 15 SITE 1 AC5 5 ALA A 187 GLU A 196 TRP A 197 THR A 198 SITE 2 AC5 5 ASP A 215 SITE 1 AC6 7 VAL A 272 TYR A 277 ALA A 312 SER A 329 SITE 2 AC6 7 LYS A 330 HOH A1340 HOH A1581 SITE 1 AC7 7 SER A 297 ALA A 298 GLY A 301 ILE A 302 SITE 2 AC7 7 HOH A 867 HOH A1038 HOH A1071 SITE 1 AC8 5 GLY A 72 THR A 74 GLY A 181 SER A 182 SITE 2 AC8 5 HOH A1839 SITE 1 AC9 7 GLU A 52 SER A 84 SER A 85 SER A 86 SITE 2 AC9 7 VAL A 112 SER A 113 HOH A 804 SITE 1 AD1 6 CYS A 255 ASP A 279 GLY A 281 CYS A 290 SITE 2 AD1 6 HOH A1720 HOH A2095 SITE 1 AD2 4 SER A 4 THR A 6 HOH A1232 HOH A1451 SITE 1 AD3 7 ASP A 35 GLY A 37 TYR A 79 GLY A 80 SITE 2 AD3 7 ASP A 219 46W A 413 HOH A 546 SITE 1 AD4 9 ASP A 33 TYR A 79 GLY A 80 ASP A 81 SITE 2 AD4 9 SER A 83 GLY A 221 THR A 222 DMS A 401 SITE 3 AD4 9 46W A 412 CRYST1 45.270 72.914 52.602 90.00 109.38 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022090 0.000000 0.007771 0.00000 SCALE2 0.000000 0.013715 0.000000 0.00000 SCALE3 0.000000 0.000000 0.020153 0.00000