HEADER HYDROLASE 11-FEB-15 4Y51 TITLE ENDOTHIAPEPSIN IN COMPLEX WITH FRAGMENT 52 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ENDOTHIAPEPSIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ASPARTATE PROTEASE; COMPND 5 EC: 3.4.23.22 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CRYPHONECTRIA PARASITICA; SOURCE 3 ORGANISM_COMMON: CHESNUT BLIGHT FUNGUS; SOURCE 4 ORGANISM_TAXID: 5116 KEYWDS FRAGMENT SCREENING, HYDROLASE, INHIBITION EXPDTA X-RAY DIFFRACTION AUTHOR N.RADEVA,A.HEINE,G.KLEBE REVDAT 2 10-JAN-24 4Y51 1 REMARK REVDAT 1 02-MAR-16 4Y51 0 JRNL AUTH N.RADEVA,A.HEINE,G.KLEBE JRNL TITL CRYSTALLOGRAPHIC FRAGMENT SCREENING OF AN ENTIRE LIBRARY JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH H.KOESTER,T.CRAAN,S.BRASS,C.HERHAUS,M.ZENTGRAF,L.NEUMANN, REMARK 1 AUTH 2 A.HEINE,G.KLEBE REMARK 1 TITL A SMALL NONRULE OF 3 COMPATIBLE FRAGMENT LIBRARY PROVIDES REMARK 1 TITL 2 HIGH HIT RATE OF ENDOTHIAPEPSIN CRYSTAL STRUCTURES WITH REMARK 1 TITL 3 VARIOUS FRAGMENT CHEMOTYPES. REMARK 1 REF J. MED. CHEM. V. 54 7784 2011 REMARK 1 REFN ISSN 1520-4804 REMARK 1 PMID 21972967 REMARK 1 DOI 10.1021/JM200642W REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.4_1492 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.48 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.1 REMARK 3 NUMBER OF REFLECTIONS : 40811 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.171 REMARK 3 R VALUE (WORKING SET) : 0.170 REMARK 3 FREE R VALUE : 0.189 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2042 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 36.4894 - 3.9522 0.97 2654 139 0.1578 0.1568 REMARK 3 2 3.9522 - 3.1375 1.00 2676 141 0.1489 0.1759 REMARK 3 3 3.1375 - 2.7410 1.00 2672 140 0.1514 0.1807 REMARK 3 4 2.7410 - 2.4905 1.00 2636 140 0.1528 0.1851 REMARK 3 5 2.4905 - 2.3120 1.00 2676 141 0.1491 0.2047 REMARK 3 6 2.3120 - 2.1757 1.00 2662 140 0.1452 0.1870 REMARK 3 7 2.1757 - 2.0668 1.00 2656 139 0.1356 0.1593 REMARK 3 8 2.0668 - 1.9768 1.00 2659 141 0.1432 0.1440 REMARK 3 9 1.9768 - 1.9007 1.00 2626 138 0.1470 0.1642 REMARK 3 10 1.9007 - 1.8351 1.00 2657 140 0.1668 0.2052 REMARK 3 11 1.8351 - 1.7777 1.00 2628 138 0.1907 0.1956 REMARK 3 12 1.7777 - 1.7269 1.00 2655 140 0.1929 0.2325 REMARK 3 13 1.7269 - 1.6815 1.00 2640 139 0.2203 0.2506 REMARK 3 14 1.6815 - 1.6404 0.98 2599 136 0.2223 0.2902 REMARK 3 15 1.6404 - 1.6032 0.63 1673 90 0.5571 0.5809 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.220 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.210 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 2512 REMARK 3 ANGLE : 1.055 3450 REMARK 3 CHIRALITY : 0.042 407 REMARK 3 PLANARITY : 0.005 453 REMARK 3 DIHEDRAL : 10.649 821 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 1:62) REMARK 3 ORIGIN FOR THE GROUP (A): 0.4636 -9.1933 14.6407 REMARK 3 T TENSOR REMARK 3 T11: 0.0642 T22: 0.0692 REMARK 3 T33: 0.0750 T12: -0.0069 REMARK 3 T13: 0.0070 T23: -0.0025 REMARK 3 L TENSOR REMARK 3 L11: 0.8643 L22: 1.0552 REMARK 3 L33: 1.3541 L12: 0.1932 REMARK 3 L13: 0.0813 L23: -0.0053 REMARK 3 S TENSOR REMARK 3 S11: 0.0015 S12: -0.0717 S13: 0.0117 REMARK 3 S21: 0.0836 S22: -0.0277 S23: 0.0650 REMARK 3 S31: 0.0450 S32: -0.1174 S33: 0.0164 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 63:81) REMARK 3 ORIGIN FOR THE GROUP (A): 3.3057 -2.4976 25.1509 REMARK 3 T TENSOR REMARK 3 T11: 0.0782 T22: 0.1130 REMARK 3 T33: 0.0740 T12: 0.0091 REMARK 3 T13: 0.0068 T23: -0.0168 REMARK 3 L TENSOR REMARK 3 L11: 0.9830 L22: 2.8673 REMARK 3 L33: 2.3823 L12: 0.1408 REMARK 3 L13: -0.3170 L23: -0.0884 REMARK 3 S TENSOR REMARK 3 S11: -0.0667 S12: -0.1162 S13: 0.0694 REMARK 3 S21: 0.1032 S22: 0.1205 S23: 0.1164 REMARK 3 S31: -0.1777 S32: -0.1970 S33: -0.0732 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 82:151) REMARK 3 ORIGIN FOR THE GROUP (A): 6.0903 -3.1229 18.8767 REMARK 3 T TENSOR REMARK 3 T11: 0.0927 T22: 0.0609 REMARK 3 T33: 0.0641 T12: 0.0077 REMARK 3 T13: -0.0042 T23: -0.0017 REMARK 3 L TENSOR REMARK 3 L11: 1.4339 L22: 1.3186 REMARK 3 L33: 1.6474 L12: 0.0843 REMARK 3 L13: 0.4379 L23: 0.1718 REMARK 3 S TENSOR REMARK 3 S11: -0.0307 S12: -0.0956 S13: 0.0373 REMARK 3 S21: 0.0449 S22: -0.0305 S23: 0.0340 REMARK 3 S31: -0.0670 S32: -0.0710 S33: 0.0576 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 152:190) REMARK 3 ORIGIN FOR THE GROUP (A): 14.5889 -4.8312 -0.2549 REMARK 3 T TENSOR REMARK 3 T11: 0.0609 T22: 0.0628 REMARK 3 T33: 0.0950 T12: 0.0069 REMARK 3 T13: 0.0087 T23: 0.0043 REMARK 3 L TENSOR REMARK 3 L11: 1.3417 L22: 1.6747 REMARK 3 L33: 1.4029 L12: 0.2829 REMARK 3 L13: 0.0101 L23: -0.3686 REMARK 3 S TENSOR REMARK 3 S11: -0.0115 S12: 0.0170 S13: -0.0071 REMARK 3 S21: -0.0844 S22: -0.0317 S23: -0.1258 REMARK 3 S31: 0.0492 S32: 0.0813 S33: 0.0392 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN A AND RESID 191:204) REMARK 3 ORIGIN FOR THE GROUP (A): 9.9757 10.9990 -0.3614 REMARK 3 T TENSOR REMARK 3 T11: 0.1073 T22: 0.0673 REMARK 3 T33: 0.1385 T12: 0.0136 REMARK 3 T13: 0.0059 T23: -0.0079 REMARK 3 L TENSOR REMARK 3 L11: 1.4360 L22: 1.0115 REMARK 3 L33: 8.3542 L12: -0.4174 REMARK 3 L13: 1.7178 L23: -2.5617 REMARK 3 S TENSOR REMARK 3 S11: -0.0080 S12: 0.0237 S13: 0.0043 REMARK 3 S21: 0.1559 S22: -0.0121 S23: -0.0642 REMARK 3 S31: -0.4721 S32: -0.0572 S33: -0.0438 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN A AND RESID 205:242) REMARK 3 ORIGIN FOR THE GROUP (A): 0.6814 11.1757 -7.4849 REMARK 3 T TENSOR REMARK 3 T11: 0.0799 T22: 0.0389 REMARK 3 T33: 0.0816 T12: 0.0027 REMARK 3 T13: 0.0212 T23: 0.0033 REMARK 3 L TENSOR REMARK 3 L11: 1.3404 L22: 0.8074 REMARK 3 L33: 1.6994 L12: -0.2377 REMARK 3 L13: 0.7731 L23: -0.4616 REMARK 3 S TENSOR REMARK 3 S11: -0.0233 S12: 0.0403 S13: 0.0634 REMARK 3 S21: -0.0589 S22: -0.0112 S23: -0.0417 REMARK 3 S31: -0.0354 S32: 0.0126 S33: 0.0385 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (CHAIN A AND RESID 243:258) REMARK 3 ORIGIN FOR THE GROUP (A): -13.5441 8.2514 -7.9673 REMARK 3 T TENSOR REMARK 3 T11: 0.0780 T22: 0.1066 REMARK 3 T33: 0.1080 T12: -0.0181 REMARK 3 T13: 0.0296 T23: -0.0158 REMARK 3 L TENSOR REMARK 3 L11: 3.1920 L22: 3.6402 REMARK 3 L33: 3.3318 L12: 1.0825 REMARK 3 L13: 1.9571 L23: -1.5408 REMARK 3 S TENSOR REMARK 3 S11: -0.1075 S12: -0.0629 S13: 0.2227 REMARK 3 S21: 0.1916 S22: 0.1572 S23: 0.0960 REMARK 3 S31: -0.0714 S32: -0.0277 S33: -0.0157 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: (CHAIN A AND RESID 259:330) REMARK 3 ORIGIN FOR THE GROUP (A): 2.6633 3.9904 -4.3469 REMARK 3 T TENSOR REMARK 3 T11: 0.0780 T22: 0.0551 REMARK 3 T33: 0.0746 T12: 0.0007 REMARK 3 T13: 0.0132 T23: 0.0059 REMARK 3 L TENSOR REMARK 3 L11: 2.6345 L22: 0.7030 REMARK 3 L33: 0.5701 L12: -0.5070 REMARK 3 L13: 0.5003 L23: -0.2239 REMARK 3 S TENSOR REMARK 3 S11: 0.0064 S12: -0.0078 S13: -0.0623 REMARK 3 S21: 0.0054 S22: -0.0301 S23: -0.0665 REMARK 3 S31: -0.0295 S32: 0.0151 S33: 0.0159 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4Y51 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 11-FEB-15. REMARK 100 THE DEPOSITION ID IS D_1000206867. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-NOV-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.891200 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 40865 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 42.480 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.1 REMARK 200 DATA REDUNDANCY : 4.060 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.06700 REMARK 200 FOR THE DATA SET : 17.3300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.70 REMARK 200 COMPLETENESS FOR SHELL (%) : 84.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.37 REMARK 200 R MERGE FOR SHELL (I) : 0.63000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3PCW REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 34.57 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.88 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M AMMONIUM ACETATE, 0.1 M SODIUM REMARK 280 ACETATE, 24-30% PEG 4000, PH 4.6, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 36.48000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 450 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12620 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 2.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 63 CD CE NZ REMARK 470 LYS A 68 CG CD CE NZ REMARK 470 LYS A 111 CE NZ REMARK 470 LYS A 142 NZ REMARK 470 LYS A 149 NZ REMARK 470 LYS A 191 CG CD CE NZ REMARK 470 LYS A 243 NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 1548 O HOH A 1691 2.12 REMARK 500 O HOH A 831 O HOH A 893 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 2164 O HOH A 2600 1454 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 49 119.68 -39.54 REMARK 500 ALA A 129 -168.71 -77.53 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 47A A 403 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3PGI RELATED DB: PDB REMARK 900 RELATED ID: 4Y35 RELATED DB: PDB REMARK 900 RELATED ID: 4Y36 RELATED DB: PDB REMARK 900 RELATED ID: 4Y37 RELATED DB: PDB REMARK 900 RELATED ID: 4Y39 RELATED DB: PDB REMARK 900 RELATED ID: 4Y3A RELATED DB: PDB REMARK 900 RELATED ID: 4Y3D RELATED DB: PDB REMARK 900 RELATED ID: 4Y3F RELATED DB: PDB REMARK 900 RELATED ID: 4Y3G RELATED DB: PDB REMARK 900 RELATED ID: 4Y3H RELATED DB: PDB REMARK 900 RELATED ID: 4Y3L RELATED DB: PDB REMARK 900 RELATED ID: 4Y3M RELATED DB: PDB REMARK 900 RELATED ID: 4Y3N RELATED DB: PDB REMARK 900 RELATED ID: 4Y3P RELATED DB: PDB REMARK 900 RELATED ID: 4Y3Q RELATED DB: PDB REMARK 900 RELATED ID: 4Y3R RELATED DB: PDB REMARK 900 RELATED ID: 4Y3S RELATED DB: PDB REMARK 900 RELATED ID: 4Y3T RELATED DB: PDB REMARK 900 RELATED ID: 4Y3W RELATED DB: PDB REMARK 900 RELATED ID: 4Y3X RELATED DB: PDB REMARK 900 RELATED ID: 4Y3Z RELATED DB: PDB REMARK 900 RELATED ID: 4Y41 RELATED DB: PDB REMARK 900 RELATED ID: 4Y43 RELATED DB: PDB REMARK 900 RELATED ID: 4Y44 RELATED DB: PDB REMARK 900 RELATED ID: 4Y45 RELATED DB: PDB REMARK 900 RELATED ID: 4Y47 RELATED DB: PDB REMARK 900 RELATED ID: 4Y4A RELATED DB: PDB REMARK 900 RELATED ID: 4Y4B RELATED DB: PDB REMARK 900 RELATED ID: 4Y4C RELATED DB: PDB REMARK 900 RELATED ID: 4Y4E RELATED DB: PDB REMARK 900 RELATED ID: 4Y4T RELATED DB: PDB REMARK 900 RELATED ID: 4Y4U RELATED DB: PDB REMARK 900 RELATED ID: 4Y4W RELATED DB: PDB REMARK 900 RELATED ID: 4Y4X RELATED DB: PDB REMARK 900 RELATED ID: 4Y4Z RELATED DB: PDB REMARK 900 RELATED ID: 4Y50 RELATED DB: PDB REMARK 900 RELATED ID: 4Y51 RELATED DB: PDB REMARK 900 RELATED ID: 4Y53 RELATED DB: PDB REMARK 900 RELATED ID: 4Y54 RELATED DB: PDB REMARK 900 RELATED ID: 4Y56 RELATED DB: PDB REMARK 900 RELATED ID: 4Y57 RELATED DB: PDB REMARK 900 RELATED ID: 4Y58 RELATED DB: PDB REMARK 900 RELATED ID: 4Y5A RELATED DB: PDB REMARK 900 RELATED ID: 4Y5B RELATED DB: PDB REMARK 900 RELATED ID: 4Y5C RELATED DB: PDB REMARK 900 RELATED ID: 4Y5E RELATED DB: PDB REMARK 900 RELATED ID: 4Y5G RELATED DB: PDB REMARK 900 RELATED ID: 4Y5K RELATED DB: PDB REMARK 900 RELATED ID: 4Y5L RELATED DB: PDB REMARK 900 RELATED ID: 4Y5M RELATED DB: PDB REMARK 900 RELATED ID: 4Y5N RELATED DB: PDB REMARK 900 RELATED ID: 4Y5P RELATED DB: PDB REMARK 900 RELATED ID: 4YCK RELATED DB: PDB REMARK 900 RELATED ID: 4YCT RELATED DB: PDB REMARK 900 RELATED ID: 4YCY RELATED DB: PDB REMARK 900 RELATED ID: 4YD3 RELATED DB: PDB REMARK 900 RELATED ID: 4YD4 RELATED DB: PDB REMARK 900 RELATED ID: 4YD5 RELATED DB: PDB REMARK 900 RELATED ID: 4YD6 RELATED DB: PDB REMARK 900 RELATED ID: 4YD7 RELATED DB: PDB REMARK 900 RELATED ID: 4Y48 RELATED DB: PDB REMARK 900 RELATED ID: 4Y4J RELATED DB: PDB REMARK 900 RELATED ID: 4Y4G RELATED DB: PDB REMARK 900 RELATED ID: 4Y4D RELATED DB: PDB REMARK 900 RELATED ID: 4Y38 RELATED DB: PDB REMARK 900 RELATED ID: 4Y3Y RELATED DB: PDB REMARK 900 RELATED ID: 4Y3J RELATED DB: PDB DBREF 4Y51 A 1 330 UNP P11838 CARP_CRYPA 90 419 SEQRES 1 A 330 SER THR GLY SER ALA THR THR THR PRO ILE ASP SER LEU SEQRES 2 A 330 ASP ASP ALA TYR ILE THR PRO VAL GLN ILE GLY THR PRO SEQRES 3 A 330 ALA GLN THR LEU ASN LEU ASP PHE ASP THR GLY SER SER SEQRES 4 A 330 ASP LEU TRP VAL PHE SER SER GLU THR THR ALA SER GLU SEQRES 5 A 330 VAL ASP GLY GLN THR ILE TYR THR PRO SER LYS SER THR SEQRES 6 A 330 THR ALA LYS LEU LEU SER GLY ALA THR TRP SER ILE SER SEQRES 7 A 330 TYR GLY ASP GLY SER SER SER SER GLY ASP VAL TYR THR SEQRES 8 A 330 ASP THR VAL SER VAL GLY GLY LEU THR VAL THR GLY GLN SEQRES 9 A 330 ALA VAL GLU SER ALA LYS LYS VAL SER SER SER PHE THR SEQRES 10 A 330 GLU ASP SER THR ILE ASP GLY LEU LEU GLY LEU ALA PHE SEQRES 11 A 330 SER THR LEU ASN THR VAL SER PRO THR GLN GLN LYS THR SEQRES 12 A 330 PHE PHE ASP ASN ALA LYS ALA SER LEU ASP SER PRO VAL SEQRES 13 A 330 PHE THR ALA ASP LEU GLY TYR HIS ALA PRO GLY THR TYR SEQRES 14 A 330 ASN PHE GLY PHE ILE ASP THR THR ALA TYR THR GLY SER SEQRES 15 A 330 ILE THR TYR THR ALA VAL SER THR LYS GLN GLY PHE TRP SEQRES 16 A 330 GLU TRP THR SER THR GLY TYR ALA VAL GLY SER GLY THR SEQRES 17 A 330 PHE LYS SER THR SER ILE ASP GLY ILE ALA ASP THR GLY SEQRES 18 A 330 THR THR LEU LEU TYR LEU PRO ALA THR VAL VAL SER ALA SEQRES 19 A 330 TYR TRP ALA GLN VAL SER GLY ALA LYS SER SER SER SER SEQRES 20 A 330 VAL GLY GLY TYR VAL PHE PRO CYS SER ALA THR LEU PRO SEQRES 21 A 330 SER PHE THR PHE GLY VAL GLY SER ALA ARG ILE VAL ILE SEQRES 22 A 330 PRO GLY ASP TYR ILE ASP PHE GLY PRO ILE SER THR GLY SEQRES 23 A 330 SER SER SER CYS PHE GLY GLY ILE GLN SER SER ALA GLY SEQRES 24 A 330 ILE GLY ILE ASN ILE PHE GLY ASP VAL ALA LEU LYS ALA SEQRES 25 A 330 ALA PHE VAL VAL PHE ASN GLY ALA THR THR PRO THR LEU SEQRES 26 A 330 GLY PHE ALA SER LYS HET GOL A 401 6 HET EDO A 402 4 HET 47A A 403 11 HETNAM GOL GLYCEROL HETNAM EDO 1,2-ETHANEDIOL HETNAM 47A 2-AMINO-1-(4-BROMOPHENYL)ETHANONE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 2 GOL C3 H8 O3 FORMUL 3 EDO C2 H6 O2 FORMUL 4 47A C8 H8 BR N O FORMUL 5 HOH *267(H2 O) HELIX 1 AA1 THR A 49 VAL A 53 5 5 HELIX 2 AA2 THR A 60 SER A 64 5 5 HELIX 3 AA3 SER A 113 GLU A 118 1 6 HELIX 4 AA4 PHE A 130 ASN A 134 5 5 HELIX 5 AA5 THR A 143 LYS A 149 1 7 HELIX 6 AA6 ALA A 150 LEU A 152 5 3 HELIX 7 AA7 PRO A 228 ALA A 237 1 10 HELIX 8 AA8 PRO A 274 TYR A 277 5 4 HELIX 9 AA9 GLY A 306 LYS A 311 1 6 SHEET 1 AA1 9 LYS A 68 SER A 78 0 SHEET 2 AA1 9 SER A 84 VAL A 96 -1 O VAL A 89 N LEU A 70 SHEET 3 AA1 9 TYR A 17 ILE A 23 -1 N GLN A 22 O SER A 95 SHEET 4 AA1 9 GLY A 3 PRO A 9 -1 N THR A 8 O ILE A 18 SHEET 5 AA1 9 GLY A 167 PHE A 171 -1 O GLY A 167 N THR A 7 SHEET 6 AA1 9 VAL A 156 ASP A 160 -1 N THR A 158 O ASN A 170 SHEET 7 AA1 9 PHE A 314 ASN A 318 -1 O PHE A 317 N PHE A 157 SHEET 8 AA1 9 THR A 324 ALA A 328 -1 O GLY A 326 N VAL A 316 SHEET 9 AA1 9 THR A 184 ALA A 187 -1 N THR A 184 O PHE A 327 SHEET 1 AA213 LYS A 68 SER A 78 0 SHEET 2 AA213 SER A 84 VAL A 96 -1 O VAL A 89 N LEU A 70 SHEET 3 AA213 LEU A 99 VAL A 112 -1 O VAL A 106 N TYR A 90 SHEET 4 AA213 LEU A 41 VAL A 43 1 N LEU A 41 O GLU A 107 SHEET 5 AA213 GLY A 124 GLY A 127 -1 O LEU A 125 N TRP A 42 SHEET 6 AA213 GLN A 28 ASP A 35 1 N ASP A 33 O GLY A 124 SHEET 7 AA213 TYR A 17 ILE A 23 -1 N ILE A 23 O GLN A 28 SHEET 8 AA213 GLY A 3 PRO A 9 -1 N THR A 8 O ILE A 18 SHEET 9 AA213 GLY A 167 PHE A 171 -1 O GLY A 167 N THR A 7 SHEET 10 AA213 VAL A 156 ASP A 160 -1 N THR A 158 O ASN A 170 SHEET 11 AA213 PHE A 314 ASN A 318 -1 O PHE A 317 N PHE A 157 SHEET 12 AA213 THR A 324 ALA A 328 -1 O GLY A 326 N VAL A 316 SHEET 13 AA213 THR A 184 ALA A 187 -1 N THR A 184 O PHE A 327 SHEET 1 AA3 7 ALA A 269 ILE A 273 0 SHEET 2 AA3 7 PHE A 262 VAL A 266 -1 N PHE A 262 O ILE A 273 SHEET 3 AA3 7 GLU A 196 VAL A 204 -1 N ALA A 203 O THR A 263 SHEET 4 AA3 7 LYS A 210 ALA A 218 -1 O LYS A 210 N TYR A 202 SHEET 5 AA3 7 ASN A 303 PHE A 305 1 O PHE A 305 N ILE A 217 SHEET 6 AA3 7 LEU A 225 LEU A 227 -1 N TYR A 226 O ILE A 304 SHEET 7 AA3 7 ILE A 294 SER A 296 1 O GLN A 295 N LEU A 225 SHEET 1 AA4 4 LYS A 243 SER A 245 0 SHEET 2 AA4 4 GLY A 250 PRO A 254 -1 O VAL A 252 N LYS A 243 SHEET 3 AA4 4 SER A 289 GLY A 292 -1 O CYS A 290 N PHE A 253 SHEET 4 AA4 4 ASP A 279 PRO A 282 -1 N GLY A 281 O PHE A 291 SSBOND 1 CYS A 255 CYS A 290 1555 1555 2.03 CISPEP 1 THR A 25 PRO A 26 0 -6.89 CISPEP 2 SER A 137 PRO A 138 0 5.70 SITE 1 AC1 7 VAL A 272 TYR A 277 ALA A 312 SER A 329 SITE 2 AC1 7 LYS A 330 HOH A1340 HOH A1581 SITE 1 AC2 5 ALA A 187 GLU A 196 TRP A 197 THR A 198 SITE 2 AC2 5 ASP A 215 SITE 1 AC3 11 ASP A 33 ASP A 35 TYR A 79 ASP A 81 SITE 2 AC3 11 SER A 83 SER A 115 PHE A 116 LEU A 125 SITE 3 AC3 11 GLY A 221 HOH A 501 HOH A 569 CRYST1 45.074 72.960 52.495 90.00 109.52 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022186 0.000000 0.007865 0.00000 SCALE2 0.000000 0.013706 0.000000 0.00000 SCALE3 0.000000 0.000000 0.020211 0.00000