HEADER HEME BINDING PROTEIN 16-FEB-15 4Y7S TITLE CRYSTAL STRUCTURE OF THE CFEM PROTEIN CSA2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: SURFACE ANTIGEN PROTEIN 2; COMPND 3 CHAIN: A, B, C; COMPND 4 FRAGMENT: UNP RESIDUES 34-144; COMPND 5 SYNONYM: CSA2; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CANDIDA ALBICANS; SOURCE 3 ORGANISM_COMMON: YEAST; SOURCE 4 ORGANISM_TAXID: 5476; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VARIANT: ORIGAMI KEYWDS CFEM, HEMOPROTEIN, CSA-2, IRON ACQUISITION, HEME BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR H.DVIR,Z.WEISSMAN,L.NASSER,D.HIYA,D.KORNITZER REVDAT 2 12-OCT-16 4Y7S 1 JRNL REVDAT 1 03-AUG-16 4Y7S 0 JRNL AUTH L.NASSER,Z.WEISSMAN,M.PINSKY,H.AMARTELY,H.DVIR,D.KORNITZER JRNL TITL STRUCTURAL BASIS OF HAEM-IRON ACQUISITION BY FUNGAL JRNL TITL 2 PATHOGENS. JRNL REF NAT MICROBIOL V. 1 16156 2016 JRNL REFN ESSN 2058-5276 JRNL PMID 27617569 JRNL DOI 10.1038/NMICROBIOL.2016.156 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.67 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.930 REMARK 3 COMPLETENESS FOR RANGE (%) : 89.0 REMARK 3 NUMBER OF REFLECTIONS : 25528 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.155 REMARK 3 R VALUE (WORKING SET) : 0.153 REMARK 3 FREE R VALUE : 0.192 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.870 REMARK 3 FREE R VALUE TEST SET COUNT : 2079 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 28.6751 - 4.9220 1.00 3043 155 0.1401 0.1471 REMARK 3 2 4.9220 - 3.9099 1.00 3037 150 0.1191 0.1708 REMARK 3 3 3.9099 - 3.4166 1.00 2994 185 0.1425 0.1902 REMARK 3 4 3.4166 - 3.1046 1.00 3013 170 0.1644 0.2016 REMARK 3 5 3.1046 - 2.8823 1.00 3065 136 0.1613 0.2195 REMARK 3 6 2.8823 - 2.7125 1.00 3022 170 0.1605 0.2075 REMARK 3 7 2.7125 - 2.5767 1.00 3038 152 0.1623 0.1955 REMARK 3 8 2.5767 - 2.4646 1.00 3072 149 0.1639 0.2122 REMARK 3 9 2.4646 - 2.3698 1.00 2992 162 0.1590 0.2113 REMARK 3 10 2.3698 - 2.2881 1.00 3046 138 0.1628 0.2365 REMARK 3 11 2.2881 - 2.2165 0.96 2886 165 0.1665 0.1697 REMARK 3 12 2.2165 - 2.1532 0.87 2700 117 0.1793 0.2261 REMARK 3 13 2.1532 - 2.0965 0.69 2094 102 0.1767 0.2392 REMARK 3 14 2.0965 - 2.0454 0.51 1533 67 0.1962 0.2071 REMARK 3 15 2.0454 - 1.9989 0.34 1045 61 0.2281 0.2279 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.180 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.030 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 24.36 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 36.07 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 2671 REMARK 3 ANGLE : 1.528 3693 REMARK 3 CHIRALITY : 0.046 392 REMARK 3 PLANARITY : 0.007 463 REMARK 3 DIHEDRAL : 13.455 889 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 18 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 34 THROUGH 51 ) REMARK 3 ORIGIN FOR THE GROUP (A): 35.8032 -6.4909 -1.6079 REMARK 3 T TENSOR REMARK 3 T11: 0.2523 T22: 0.4453 REMARK 3 T33: 0.2901 T12: 0.0427 REMARK 3 T13: -0.0162 T23: -0.1396 REMARK 3 L TENSOR REMARK 3 L11: 3.2182 L22: 5.0557 REMARK 3 L33: 3.8493 L12: 3.9964 REMARK 3 L13: -1.1562 L23: -2.0059 REMARK 3 S TENSOR REMARK 3 S11: -0.1970 S12: 0.1176 S13: 0.2759 REMARK 3 S21: 0.2405 S22: 0.1052 S23: 0.8455 REMARK 3 S31: -0.3578 S32: -1.1266 S33: 0.0975 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 52 THROUGH 87 ) REMARK 3 ORIGIN FOR THE GROUP (A): 45.7342 -11.6141 2.9466 REMARK 3 T TENSOR REMARK 3 T11: 0.1650 T22: 0.1993 REMARK 3 T33: 0.1128 T12: -0.0268 REMARK 3 T13: -0.0027 T23: -0.0360 REMARK 3 L TENSOR REMARK 3 L11: 4.2161 L22: 6.9324 REMARK 3 L33: 1.7517 L12: -2.6828 REMARK 3 L13: -0.2256 L23: -0.0392 REMARK 3 S TENSOR REMARK 3 S11: -0.0698 S12: -0.0578 S13: -0.2347 REMARK 3 S21: 0.0212 S22: -0.0076 S23: 0.0693 REMARK 3 S31: 0.1733 S32: -0.1688 S33: 0.0841 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 88 THROUGH 103 ) REMARK 3 ORIGIN FOR THE GROUP (A): 54.8765 -8.9595 8.8987 REMARK 3 T TENSOR REMARK 3 T11: 0.1540 T22: 0.2296 REMARK 3 T33: 0.2175 T12: 0.0143 REMARK 3 T13: -0.0118 T23: -0.0440 REMARK 3 L TENSOR REMARK 3 L11: 5.6635 L22: 2.0562 REMARK 3 L33: 7.5649 L12: -2.7958 REMARK 3 L13: -3.7098 L23: 0.4215 REMARK 3 S TENSOR REMARK 3 S11: -0.2452 S12: -0.9684 S13: -0.1840 REMARK 3 S21: 0.2589 S22: 0.2486 S23: -0.1653 REMARK 3 S31: 0.2287 S32: 0.4833 S33: 0.0557 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 104 THROUGH 131 ) REMARK 3 ORIGIN FOR THE GROUP (A): 51.3650 -1.6282 0.0102 REMARK 3 T TENSOR REMARK 3 T11: 0.1691 T22: 0.1167 REMARK 3 T33: 0.1521 T12: -0.0064 REMARK 3 T13: 0.0009 T23: 0.0071 REMARK 3 L TENSOR REMARK 3 L11: 2.4100 L22: 2.7838 REMARK 3 L33: 4.6273 L12: 1.0235 REMARK 3 L13: 2.7164 L23: -0.7596 REMARK 3 S TENSOR REMARK 3 S11: -0.0772 S12: 0.0911 S13: 0.2911 REMARK 3 S21: -0.1384 S22: -0.1264 S23: -0.1044 REMARK 3 S31: -0.3140 S32: -0.0617 S33: 0.2023 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 132 THROUGH 144 ) REMARK 3 ORIGIN FOR THE GROUP (A): 61.6271 -1.5926 8.0879 REMARK 3 T TENSOR REMARK 3 T11: 0.1891 T22: 0.3390 REMARK 3 T33: 0.2979 T12: -0.0569 REMARK 3 T13: -0.0198 T23: -0.0336 REMARK 3 L TENSOR REMARK 3 L11: 7.9941 L22: 6.5094 REMARK 3 L33: 2.4082 L12: -0.0758 REMARK 3 L13: -4.2355 L23: 0.8943 REMARK 3 S TENSOR REMARK 3 S11: -0.1195 S12: -0.7719 S13: 0.4137 REMARK 3 S21: -0.1537 S22: 0.4891 S23: -0.8974 REMARK 3 S31: -0.2312 S32: 1.1198 S33: -0.3722 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 34 THROUGH 51 ) REMARK 3 ORIGIN FOR THE GROUP (A): 47.3750 10.8087 14.4654 REMARK 3 T TENSOR REMARK 3 T11: 0.2664 T22: 0.2186 REMARK 3 T33: 0.3152 T12: -0.0124 REMARK 3 T13: -0.0267 T23: 0.0656 REMARK 3 L TENSOR REMARK 3 L11: 3.0472 L22: 4.6774 REMARK 3 L33: 1.8439 L12: -2.3786 REMARK 3 L13: -0.5269 L23: -1.8150 REMARK 3 S TENSOR REMARK 3 S11: 0.0284 S12: 0.3480 S13: 0.8784 REMARK 3 S21: 0.0322 S22: -0.3398 S23: -0.6123 REMARK 3 S31: -0.3960 S32: 0.3197 S33: 0.3782 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 52 THROUGH 87 ) REMARK 3 ORIGIN FOR THE GROUP (A): 36.2813 15.0704 13.5101 REMARK 3 T TENSOR REMARK 3 T11: 0.3493 T22: 0.2310 REMARK 3 T33: 0.3209 T12: 0.0937 REMARK 3 T13: 0.0014 T23: -0.0125 REMARK 3 L TENSOR REMARK 3 L11: 6.3409 L22: 4.6184 REMARK 3 L33: 2.8406 L12: 0.1664 REMARK 3 L13: 1.7109 L23: 0.0341 REMARK 3 S TENSOR REMARK 3 S11: -0.0038 S12: 0.4493 S13: 0.7790 REMARK 3 S21: -0.0515 S22: -0.2937 S23: 0.2362 REMARK 3 S31: -0.4982 S32: -0.3052 S33: 0.2270 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 88 THROUGH 103 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.7617 13.2946 16.6163 REMARK 3 T TENSOR REMARK 3 T11: 0.3513 T22: 0.3053 REMARK 3 T33: 0.5201 T12: 0.0347 REMARK 3 T13: 0.0239 T23: -0.2081 REMARK 3 L TENSOR REMARK 3 L11: 5.0970 L22: 2.6662 REMARK 3 L33: 4.3726 L12: -2.2324 REMARK 3 L13: 0.1831 L23: -0.6676 REMARK 3 S TENSOR REMARK 3 S11: -0.0341 S12: -0.3768 S13: 0.2401 REMARK 3 S21: 0.0374 S22: -0.1482 S23: 0.8000 REMARK 3 S31: -0.3227 S32: -0.5876 S33: 0.3107 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 104 THROUGH 144 ) REMARK 3 ORIGIN FOR THE GROUP (A): 28.8347 4.2716 14.3881 REMARK 3 T TENSOR REMARK 3 T11: 0.3158 T22: 0.2700 REMARK 3 T33: 0.4057 T12: 0.0205 REMARK 3 T13: -0.0428 T23: -0.1561 REMARK 3 L TENSOR REMARK 3 L11: 4.7660 L22: 2.5430 REMARK 3 L33: 2.2493 L12: 0.0692 REMARK 3 L13: 1.8785 L23: -0.0569 REMARK 3 S TENSOR REMARK 3 S11: 0.5033 S12: 0.0818 S13: -0.4534 REMARK 3 S21: -0.0774 S22: -0.4989 S23: 0.8679 REMARK 3 S31: 0.3128 S32: -0.3741 S33: -0.0019 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 34 THROUGH 38 ) REMARK 3 ORIGIN FOR THE GROUP (A): 35.2027 6.1295 35.9924 REMARK 3 T TENSOR REMARK 3 T11: 0.3631 T22: 0.4398 REMARK 3 T33: 0.4691 T12: 0.1416 REMARK 3 T13: -0.0325 T23: -0.1411 REMARK 3 L TENSOR REMARK 3 L11: 6.2615 L22: 5.0673 REMARK 3 L33: 4.9313 L12: 5.6050 REMARK 3 L13: -5.1632 L23: -4.5554 REMARK 3 S TENSOR REMARK 3 S11: 0.0060 S12: -0.0798 S13: -0.3524 REMARK 3 S21: -0.1286 S22: -0.0069 S23: -1.3445 REMARK 3 S31: 0.7234 S32: 0.4102 S33: 0.0135 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 39 THROUGH 51 ) REMARK 3 ORIGIN FOR THE GROUP (A): 39.4004 -4.4132 27.9601 REMARK 3 T TENSOR REMARK 3 T11: 0.2210 T22: 0.1822 REMARK 3 T33: 0.2882 T12: -0.0200 REMARK 3 T13: -0.0032 T23: -0.0120 REMARK 3 L TENSOR REMARK 3 L11: 7.3025 L22: 5.8640 REMARK 3 L33: 2.1710 L12: -5.0516 REMARK 3 L13: -0.3216 L23: -2.0361 REMARK 3 S TENSOR REMARK 3 S11: 0.1287 S12: -0.0405 S13: -0.6392 REMARK 3 S21: -0.1736 S22: 0.0321 S23: 0.7463 REMARK 3 S31: -0.0097 S32: -0.0358 S33: -0.1302 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 52 THROUGH 60 ) REMARK 3 ORIGIN FOR THE GROUP (A): 48.6151 -8.8287 21.0813 REMARK 3 T TENSOR REMARK 3 T11: 0.2663 T22: 0.3400 REMARK 3 T33: 0.2401 T12: 0.0588 REMARK 3 T13: -0.0271 T23: -0.0371 REMARK 3 L TENSOR REMARK 3 L11: 7.9979 L22: 7.1150 REMARK 3 L33: 3.9832 L12: -4.7096 REMARK 3 L13: -5.5365 L23: 3.3397 REMARK 3 S TENSOR REMARK 3 S11: 0.0851 S12: 0.8600 S13: -0.6535 REMARK 3 S21: -0.6043 S22: -0.3300 S23: 0.4508 REMARK 3 S31: 0.5627 S32: 0.0215 S33: 0.2905 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 61 THROUGH 67 ) REMARK 3 ORIGIN FOR THE GROUP (A): 54.1554 -14.3095 24.4054 REMARK 3 T TENSOR REMARK 3 T11: 0.3284 T22: 0.4807 REMARK 3 T33: 0.3975 T12: 0.1957 REMARK 3 T13: -0.0260 T23: -0.0987 REMARK 3 L TENSOR REMARK 3 L11: 1.5855 L22: 7.1083 REMARK 3 L33: 4.8636 L12: 2.7626 REMARK 3 L13: -1.4414 L23: 0.3430 REMARK 3 S TENSOR REMARK 3 S11: 0.0100 S12: 1.0582 S13: -1.2109 REMARK 3 S21: -0.8463 S22: -0.2189 S23: -0.7016 REMARK 3 S31: 0.8322 S32: 0.6591 S33: 0.1732 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 68 THROUGH 87 ) REMARK 3 ORIGIN FOR THE GROUP (A): 43.8556 -7.1726 34.9826 REMARK 3 T TENSOR REMARK 3 T11: 0.2913 T22: 0.2489 REMARK 3 T33: 0.2270 T12: 0.0027 REMARK 3 T13: 0.0712 T23: 0.0628 REMARK 3 L TENSOR REMARK 3 L11: 5.6590 L22: 8.0930 REMARK 3 L33: 4.4417 L12: 1.1254 REMARK 3 L13: 2.8451 L23: -0.9731 REMARK 3 S TENSOR REMARK 3 S11: -0.0887 S12: -0.7645 S13: -0.7543 REMARK 3 S21: 0.6374 S22: 0.1738 S23: 0.0525 REMARK 3 S31: -0.1700 S32: -0.2921 S33: -0.0569 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 88 THROUGH 103 ) REMARK 3 ORIGIN FOR THE GROUP (A): 57.6089 -10.4768 32.3918 REMARK 3 T TENSOR REMARK 3 T11: 0.3007 T22: 0.4598 REMARK 3 T33: 0.3040 T12: 0.1060 REMARK 3 T13: -0.0421 T23: 0.1323 REMARK 3 L TENSOR REMARK 3 L11: 7.3741 L22: 7.6547 REMARK 3 L33: 0.8425 L12: -1.7766 REMARK 3 L13: -0.3632 L23: 2.5242 REMARK 3 S TENSOR REMARK 3 S11: -0.0954 S12: 0.0028 S13: -0.5765 REMARK 3 S21: 0.4389 S22: -0.2563 S23: -0.5997 REMARK 3 S31: 0.7498 S32: 0.8975 S33: 0.1718 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 104 THROUGH 121 ) REMARK 3 ORIGIN FOR THE GROUP (A): 55.6847 -2.2293 24.0135 REMARK 3 T TENSOR REMARK 3 T11: 0.2297 T22: 0.4395 REMARK 3 T33: 0.2730 T12: 0.0060 REMARK 3 T13: 0.0146 T23: 0.1504 REMARK 3 L TENSOR REMARK 3 L11: 4.5150 L22: 5.4549 REMARK 3 L33: 2.3157 L12: -3.1465 REMARK 3 L13: -1.4951 L23: 1.1905 REMARK 3 S TENSOR REMARK 3 S11: 0.0955 S12: 0.1561 S13: 0.1744 REMARK 3 S21: -0.1349 S22: -0.4867 S23: -0.6969 REMARK 3 S31: -0.0787 S32: 0.9058 S33: 0.1896 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 122 THROUGH 131 ) REMARK 3 ORIGIN FOR THE GROUP (A): 52.5276 3.3488 33.0276 REMARK 3 T TENSOR REMARK 3 T11: 0.4162 T22: 0.2797 REMARK 3 T33: 0.2408 T12: -0.1128 REMARK 3 T13: -0.1259 T23: 0.0154 REMARK 3 L TENSOR REMARK 3 L11: 6.4340 L22: 2.5396 REMARK 3 L33: 3.6673 L12: -0.4905 REMARK 3 L13: 1.2757 L23: 2.2029 REMARK 3 S TENSOR REMARK 3 S11: -0.1690 S12: -0.6563 S13: 0.5761 REMARK 3 S21: 0.7151 S22: -0.0940 S23: -0.4826 REMARK 3 S31: -0.4148 S32: 0.3684 S33: 0.2401 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 132 THROUGH 142 ) REMARK 3 ORIGIN FOR THE GROUP (A): 64.8392 -4.5556 32.8113 REMARK 3 T TENSOR REMARK 3 T11: 0.3215 T22: 0.7051 REMARK 3 T33: 0.7348 T12: -0.0979 REMARK 3 T13: -0.2823 T23: 0.3381 REMARK 3 L TENSOR REMARK 3 L11: 3.9835 L22: 0.7886 REMARK 3 L33: 1.4032 L12: -1.1364 REMARK 3 L13: 1.7085 L23: -0.0561 REMARK 3 S TENSOR REMARK 3 S11: -0.0287 S12: 0.0546 S13: 0.1367 REMARK 3 S21: 0.0042 S22: -0.0502 S23: -0.1406 REMARK 3 S31: -0.0509 S32: 0.1538 S33: -0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN A REMARK 3 SELECTION : CHAIN B REMARK 3 ATOM PAIRS NUMBER : 1814 REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: CHAIN A REMARK 3 SELECTION : CHAIN C REMARK 3 ATOM PAIRS NUMBER : 1814 REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4Y7S COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 16-FEB-15. REMARK 100 THE DEPOSITION ID IS D_1000207006. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-DEC-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU FR-X REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS HTC REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25528 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.0 REMARK 200 DATA REDUNDANCY : 15.10 REMARK 200 R MERGE (I) : 0.06100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.03 REMARK 200 COMPLETENESS FOR SHELL (%) : 67.5 REMARK 200 DATA REDUNDANCY IN SHELL : 5.40 REMARK 200 R MERGE FOR SHELL (I) : 0.62500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.040 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELX, MLPHARE, DM 6.3 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.89 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.61 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN WAS MIXED AT RATION OF 2:1 REMARK 280 WITH A RESERVOIR (0.1M HEPES PH 7.5, 8% EG, 13.75% PEG 10,000), REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 30.67050 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 48.65000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 30.60400 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 48.65000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 30.67050 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 30.60400 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6310 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14040 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -83.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA C 144 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU C 65 CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HD21 ASN C 89 O HOH C 301 1.58 REMARK 500 O HOH C 356 O HOH C 365 2.10 REMARK 500 ND2 ASN C 89 O HOH C 301 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 103 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 44 31.61 -92.43 REMARK 500 ILE A 48 -73.98 -109.64 REMARK 500 TYR A 127 -64.11 78.05 REMARK 500 ILE B 48 -74.34 -108.63 REMARK 500 TYR B 127 -66.41 79.93 REMARK 500 LYS C 44 32.05 -92.39 REMARK 500 ILE C 48 -72.75 -110.10 REMARK 500 TYR C 127 -67.34 76.73 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEB A 201 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 80 OD2 REMARK 620 2 HEB A 201 NA 95.1 REMARK 620 3 HEB A 201 NB 110.6 87.4 REMARK 620 4 HEB A 201 NC 104.1 160.8 87.2 REMARK 620 5 HEB A 201 ND 89.7 89.4 159.7 89.2 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEB B 201 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 80 OD2 REMARK 620 2 HEB B 201 NA 97.6 REMARK 620 3 HEB B 201 NB 108.0 87.6 REMARK 620 4 HEB B 201 NC 101.7 160.6 88.1 REMARK 620 5 HEB B 201 ND 90.8 88.4 161.2 89.6 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEB C 201 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP C 80 OD2 REMARK 620 2 HEB C 201 NA 98.0 REMARK 620 3 HEB C 201 NB 108.1 90.2 REMARK 620 4 HEB C 201 NC 99.9 162.0 83.7 REMARK 620 5 HEB C 201 ND 90.8 87.2 161.1 93.2 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HEB A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HEB B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HEB C 201 DBREF 4Y7S A 34 144 UNP Q5A0X8 CSA2_CANAL 34 144 DBREF 4Y7S B 34 144 UNP Q5A0X8 CSA2_CANAL 34 144 DBREF 4Y7S C 34 144 UNP Q5A0X8 CSA2_CANAL 34 144 SEQRES 1 A 111 ASN PRO TYR THR ILE TYR PRO PRO VAL PRO LYS THR ALA SEQRES 2 A 111 SER ILE ASN GLY PHE ALA ASP ARG ILE TYR ASP GLN ILE SEQRES 3 A 111 PRO LYS CYS ALA GLN GLU CYS VAL LYS GLN SER THR SER SEQRES 4 A 111 SER THR PRO CYS PRO TYR TRP ASP THR GLY CYS LEU CYS SEQRES 5 A 111 VAL ILE PRO ASN PHE THR GLY ALA VAL GLY ASN CYS VAL SEQRES 6 A 111 ALA SER LYS CYS ARG GLY ALA ASP VAL THR ASN PHE ARG SEQRES 7 A 111 LYS LEU ALA VAL GLY ALA CYS ALA ALA ALA GLY VAL TRP SEQRES 8 A 111 ASP PRO TYR TRP ILE ILE PRO ALA SER VAL SER SER ALA SEQRES 9 A 111 LEU ASP ALA ALA ALA THR ALA SEQRES 1 B 111 ASN PRO TYR THR ILE TYR PRO PRO VAL PRO LYS THR ALA SEQRES 2 B 111 SER ILE ASN GLY PHE ALA ASP ARG ILE TYR ASP GLN ILE SEQRES 3 B 111 PRO LYS CYS ALA GLN GLU CYS VAL LYS GLN SER THR SER SEQRES 4 B 111 SER THR PRO CYS PRO TYR TRP ASP THR GLY CYS LEU CYS SEQRES 5 B 111 VAL ILE PRO ASN PHE THR GLY ALA VAL GLY ASN CYS VAL SEQRES 6 B 111 ALA SER LYS CYS ARG GLY ALA ASP VAL THR ASN PHE ARG SEQRES 7 B 111 LYS LEU ALA VAL GLY ALA CYS ALA ALA ALA GLY VAL TRP SEQRES 8 B 111 ASP PRO TYR TRP ILE ILE PRO ALA SER VAL SER SER ALA SEQRES 9 B 111 LEU ASP ALA ALA ALA THR ALA SEQRES 1 C 111 ASN PRO TYR THR ILE TYR PRO PRO VAL PRO LYS THR ALA SEQRES 2 C 111 SER ILE ASN GLY PHE ALA ASP ARG ILE TYR ASP GLN ILE SEQRES 3 C 111 PRO LYS CYS ALA GLN GLU CYS VAL LYS GLN SER THR SER SEQRES 4 C 111 SER THR PRO CYS PRO TYR TRP ASP THR GLY CYS LEU CYS SEQRES 5 C 111 VAL ILE PRO ASN PHE THR GLY ALA VAL GLY ASN CYS VAL SEQRES 6 C 111 ALA SER LYS CYS ARG GLY ALA ASP VAL THR ASN PHE ARG SEQRES 7 C 111 LYS LEU ALA VAL GLY ALA CYS ALA ALA ALA GLY VAL TRP SEQRES 8 C 111 ASP PRO TYR TRP ILE ILE PRO ALA SER VAL SER SER ALA SEQRES 9 C 111 LEU ASP ALA ALA ALA THR ALA HET HEB A 201 73 HET CL A 202 1 HET HEB B 201 73 HET EDO B 202 10 HET HEB C 201 73 HETNAM HEB HEME B/C HETNAM CL CHLORIDE ION HETNAM EDO 1,2-ETHANEDIOL HETSYN HEB HYBRID BETWEEN B AND C TYPE HEMES (PROTOPORPHYRIN IX HETSYN 2 HEB CONTAINING FE) HETSYN EDO ETHYLENE GLYCOL FORMUL 4 HEB 3(C34 H34 FE N4 O4) FORMUL 5 CL CL 1- FORMUL 7 EDO C2 H6 O2 FORMUL 9 HOH *241(H2 O) HELIX 1 AA1 ASN A 34 TYR A 39 5 6 HELIX 2 AA2 PHE A 51 TYR A 56 1 6 HELIX 3 AA3 PRO A 60 GLN A 69 5 10 HELIX 4 AA4 ASP A 80 ILE A 87 1 8 HELIX 5 AA5 ILE A 87 CYS A 102 1 16 HELIX 6 AA6 GLY A 104 ALA A 121 1 18 HELIX 7 AA7 PRO A 131 ALA A 144 1 14 HELIX 8 AA8 ASN B 34 TYR B 39 5 6 HELIX 9 AA9 PHE B 51 TYR B 56 1 6 HELIX 10 AB1 PRO B 60 GLN B 64 5 5 HELIX 11 AB2 GLU B 65 GLN B 69 5 5 HELIX 12 AB3 ASP B 80 ILE B 87 1 8 HELIX 13 AB4 ILE B 87 CYS B 102 1 16 HELIX 14 AB5 GLY B 104 GLY B 122 1 19 HELIX 15 AB6 PRO B 131 ALA B 144 1 14 HELIX 16 AB7 PHE C 51 TYR C 56 1 6 HELIX 17 AB8 PRO C 60 CYS C 62 5 3 HELIX 18 AB9 ALA C 63 LYS C 68 1 6 HELIX 19 AC1 ASP C 80 ILE C 87 1 8 HELIX 20 AC2 ILE C 87 CYS C 102 1 16 HELIX 21 AC3 GLY C 104 ALA C 121 1 18 HELIX 22 AC4 PRO C 131 THR C 143 1 13 SSBOND 1 CYS A 62 CYS A 102 1555 1555 2.07 SSBOND 2 CYS A 66 CYS A 97 1555 1555 2.10 SSBOND 3 CYS A 76 CYS A 83 1555 1555 2.03 SSBOND 4 CYS A 85 CYS A 118 1555 1555 2.03 SSBOND 5 CYS B 62 CYS B 102 1555 1555 1.95 SSBOND 6 CYS B 66 CYS B 97 1555 1555 2.04 SSBOND 7 CYS B 76 CYS B 83 1555 1555 2.05 SSBOND 8 CYS B 85 CYS B 118 1555 1555 2.03 SSBOND 9 CYS C 62 CYS C 102 1555 1555 2.05 SSBOND 10 CYS C 66 CYS C 97 1555 1555 2.07 SSBOND 11 CYS C 76 CYS C 83 1555 1555 2.03 SSBOND 12 CYS C 85 CYS C 118 1555 1555 2.01 LINK OD2 ASP A 80 FE HEB A 201 1555 1555 2.17 LINK OD2 ASP B 80 FE HEB B 201 1555 1555 2.14 LINK OD2 ASP C 80 FE HEB C 201 1555 1555 2.19 CISPEP 1 ASP A 125 PRO A 126 0 8.56 CISPEP 2 ASP B 125 PRO B 126 0 7.83 CISPEP 3 ASP C 125 PRO C 126 0 8.26 SITE 1 AC1 14 TYR A 36 TYR A 39 PRO A 40 LYS A 44 SITE 2 AC1 14 PRO A 75 PRO A 77 TRP A 79 ASP A 80 SITE 3 AC1 14 GLY A 82 CYS A 83 ALA A 121 VAL A 123 SITE 4 AC1 14 TRP A 124 HOH A 315 SITE 1 AC2 17 ASN B 34 TYR B 36 TYR B 39 PRO B 40 SITE 2 AC2 17 LYS B 44 PRO B 75 TRP B 79 ASP B 80 SITE 3 AC2 17 GLY B 82 CYS B 83 ALA B 121 TRP B 124 SITE 4 AC2 17 HOH B 301 HOH B 344 HOH B 347 ARG C 103 SITE 5 AC2 17 ALA C 120 SITE 1 AC3 4 THR B 108 ARG B 111 LEU B 138 ASP B 139 SITE 1 AC4 15 LYS A 112 ASN C 34 TYR C 36 TYR C 39 SITE 2 AC4 15 PRO C 40 LYS C 44 PRO C 75 PRO C 77 SITE 3 AC4 15 ASP C 80 GLY C 82 CYS C 83 ALA C 121 SITE 4 AC4 15 VAL C 123 TRP C 124 HOH C 349 CRYST1 61.341 61.208 97.300 90.00 90.00 90.00 P 21 21 21 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016302 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016338 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010277 0.00000