HEADER METAL BINDING PROTEIN 16-FEB-15 4Y8E TITLE PA3825-EAL CA-APO STRUCTURE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PA3825 EAL; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA (STRAIN ATCC 15692 / SOURCE 3 PAO1 / 1C / PRS 101 / LMG 12228); SOURCE 4 ORGANISM_TAXID: 208964; SOURCE 5 GENE: PA3825; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS EAL, METAL BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR S.HORRELL,D.BELLINI,R.STRANGE,A.WAGNER,M.WALSH REVDAT 3 10-JAN-24 4Y8E 1 LINK REVDAT 2 30-AUG-17 4Y8E 1 REMARK LINK SITE ATOM REVDAT 1 02-MAR-16 4Y8E 0 JRNL AUTH D.BELLINI,S.HORRELL,R.STRANGE,A.WAGNER,A.HITCHIN,J.S.WEBB, JRNL AUTH 2 I.TEWS,M.A.WALCH JRNL TITL STRUCTURE OF PA3825 FROM P. AERUGINOSA BOUND TO CYCLIC JRNL TITL 2 DI-GMP AND PGPG: NEW INSIGHTS FOR A POTENTIAL THREE-METAL JRNL TITL 3 CATALYTIC MECHANISM OF EAL DOMAINS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.61 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0073 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.61 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.21 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 97.0 REMARK 3 NUMBER OF REFLECTIONS : 68333 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.187 REMARK 3 R VALUE (WORKING SET) : 0.185 REMARK 3 FREE R VALUE : 0.223 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3641 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.61 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.65 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4968 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.12 REMARK 3 BIN R VALUE (WORKING SET) : 0.2960 REMARK 3 BIN FREE R VALUE SET COUNT : 254 REMARK 3 BIN FREE R VALUE : 0.3260 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3970 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 6 REMARK 3 SOLVENT ATOMS : 319 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.39 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.01000 REMARK 3 B22 (A**2) : -0.02000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.02000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.090 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.093 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.071 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.109 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.966 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.953 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4114 ; 0.023 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 3979 ; 0.005 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5583 ; 2.118 ; 1.985 REMARK 3 BOND ANGLES OTHERS (DEGREES): 9154 ; 0.980 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 517 ; 5.761 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 189 ;36.609 ;23.228 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 699 ;13.518 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 38 ;19.355 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 630 ; 0.132 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4649 ; 0.012 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 921 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2065 ; 2.986 ; 2.901 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2064 ; 2.972 ; 2.899 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2583 ; 4.172 ; 4.335 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2584 ; 4.174 ; 4.339 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2049 ; 4.386 ; 3.441 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2050 ; 4.385 ; 3.444 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 3001 ; 6.450 ; 4.959 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 4940 ; 9.611 ;24.761 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 4753 ; 9.309 ;24.304 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4Y8E COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 17-FEB-15. REMARK 100 THE DEPOSITION ID IS D_1000207027. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-MAR-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.2 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : XIA2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 68333 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.610 REMARK 200 RESOLUTION RANGE LOW (A) : 43.100 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.4 REMARK 200 DATA REDUNDANCY : 3.000 REMARK 200 R MERGE (I) : 0.02400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.61 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.65 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.4 REMARK 200 DATA REDUNDANCY IN SHELL : 3.10 REMARK 200 R MERGE FOR SHELL (I) : 0.41300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 4Y9M REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.57 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.49 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 6-11% ISO-PROPANOL, 0.1 M MES PH 6.5, REMARK 280 0.1 M SODIUM ACETATE PH 4.5 AND 0.2 M CALCIUM ACETATE, PH 5.2, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 56.22000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 29.91000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 56.22000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 29.91000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 425 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 446 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 1 REMARK 465 ARG A 2 REMARK 465 GLY A 165 REMARK 465 HIS A 166 REMARK 465 SER A 167 REMARK 465 SER A 168 REMARK 465 LEU A 169 REMARK 465 ALA A 262 REMARK 465 SER A 263 REMARK 465 SER B 1 REMARK 465 ARG B 2 REMARK 465 ARG B 3 REMARK 465 VAL B 4 REMARK 465 GLY B 165 REMARK 465 HIS B 166 REMARK 465 SER B 167 REMARK 465 ALA B 262 REMARK 465 SER B 263 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 428 O HOH B 486 1.43 REMARK 500 O THR A 194 O HOH A 401 1.60 REMARK 500 O HOH B 517 O HOH B 547 1.65 REMARK 500 O HOH A 480 O HOH A 528 1.73 REMARK 500 O HOH B 421 O HOH B 475 1.75 REMARK 500 OE1 GLU B 135 O HOH B 401 1.81 REMARK 500 O HOH A 419 O HOH A 439 1.84 REMARK 500 O HOH A 560 O HOH A 562 1.95 REMARK 500 O HOH B 414 O HOH B 513 1.97 REMARK 500 OE2 GLU A 62 O HOH A 402 1.99 REMARK 500 O HOH A 468 O HOH A 536 2.00 REMARK 500 OG SER A 196 O HOH A 403 2.04 REMARK 500 O HOH B 428 O HOH B 487 2.05 REMARK 500 OG SER A 196 O HOH A 404 2.06 REMARK 500 OE1 GLN B 184 O HOH B 402 2.09 REMARK 500 O HOH A 412 O HOH A 479 2.10 REMARK 500 O HOH A 523 O HOH A 536 2.13 REMARK 500 O HOH A 410 O HOH A 562 2.14 REMARK 500 O HOH A 498 O HOH A 539 2.16 REMARK 500 O HOH B 402 O HOH B 510 2.18 REMARK 500 OE1 GLU B 138 O HOH B 403 2.18 REMARK 500 O HOH B 422 O HOH B 536 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 189 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 ARG B 189 NE - CZ - NH2 ANGL. DEV. = -3.0 DEGREES REMARK 500 ASP B 211 CB - CG - OD1 ANGL. DEV. = 6.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 54 24.12 -79.46 REMARK 500 GLU A 106 -150.56 62.70 REMARK 500 ASP A 193 -155.57 -164.18 REMARK 500 PHE B 93 130.94 -38.56 REMARK 500 ASP B 193 96.17 -166.99 REMARK 500 GLN B 260 80.90 -151.54 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 ASP A 193 11.77 REMARK 500 ASP A 193 -13.30 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 301 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 98 OD1 REMARK 620 2 ILE A 99 O 91.0 REMARK 620 3 GLU A 135 OE1 150.9 79.6 REMARK 620 4 GLU A 135 OE2 154.1 89.0 54.1 REMARK 620 5 HOH A 467 O 77.2 100.4 77.6 128.2 REMARK 620 6 HOH A 520 O 77.7 82.4 127.4 76.6 154.7 REMARK 620 7 HOH A 535 O 92.7 175.1 98.6 86.3 83.6 95.1 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 303 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 160 OD1 REMARK 620 2 ASP A 161 OD1 79.9 REMARK 620 3 GLU A 217 OE1 126.9 82.7 REMARK 620 4 GLU A 217 OE2 80.9 96.5 51.8 REMARK 620 5 HOH A 427 O 77.7 95.4 154.0 153.2 REMARK 620 6 HOH A 489 O 157.6 97.2 74.1 121.5 80.5 REMARK 620 7 HOH A 514 O 86.3 165.5 102.3 76.8 85.9 97.3 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 301 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN B 98 OD1 REMARK 620 2 ILE B 99 O 84.9 REMARK 620 3 GLU B 135 OE1 147.3 79.1 REMARK 620 4 GLU B 135 OE2 157.8 92.4 52.2 REMARK 620 5 HOH B 401 O 126.3 115.3 42.8 74.6 REMARK 620 6 HOH B 415 O 80.2 80.9 124.4 77.6 148.2 REMARK 620 7 HOH B 456 O 73.1 92.7 79.3 129.1 57.7 153.0 REMARK 620 8 HOH B 529 O 92.0 176.8 103.1 90.8 65.8 99.7 85.3 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 303 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 160 OD1 REMARK 620 2 ASP B 161 OD1 79.8 REMARK 620 3 GLU B 217 OE1 122.2 80.7 REMARK 620 4 GLU B 217 OE2 80.2 101.9 52.0 REMARK 620 5 HOH B 481 O 80.4 91.5 153.7 154.0 REMARK 620 6 HOH B 487 O 85.1 164.4 104.4 71.5 89.7 REMARK 620 7 HOH B 503 O 157.4 94.3 77.7 122.5 77.9 101.1 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 302 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B 531 O REMARK 620 2 HOH B 546 O 92.2 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA B 303 DBREF 4Y8E A 1 263 UNP Q9HXH7 Q9HXH7_PSEAE 255 517 DBREF 4Y8E B 1 263 UNP Q9HXH7 Q9HXH7_PSEAE 255 517 SEQRES 1 A 263 SER ARG ARG VAL ALA SER PRO SER SER GLU LEU ARG ARG SEQRES 2 A 263 ALA LEU GLU ALA ASN GLU PHE ILE PRO TYR TYR GLN PRO SEQRES 3 A 263 LEU SER PRO GLY GLN GLY GLY ARG TRP ILE GLY VAL GLU SEQRES 4 A 263 VAL LEU MET ARG TRP ARG HIS PRO ARG GLU GLY LEU ILE SEQRES 5 A 263 ARG PRO ASP LEU PHE ILE PRO PHE ALA GLU ARG SER GLY SEQRES 6 A 263 LEU ILE VAL PRO MET THR ARG ALA LEU MET ARG GLN VAL SEQRES 7 A 263 ALA GLU ASP LEU GLY GLY HIS ALA GLY LYS LEU GLU PRO SEQRES 8 A 263 GLY PHE HIS ILE GLY PHE ASN ILE SER ALA THR HIS CYS SEQRES 9 A 263 HIS GLU LEU ALA LEU VAL ASP ASP CYS ARG GLU LEU LEU SEQRES 10 A 263 ALA ALA PHE PRO PRO GLY HIS ILE THR LEU VAL LEU GLU SEQRES 11 A 263 LEU THR GLU ARG GLU LEU ILE GLU SER SER GLU VAL THR SEQRES 12 A 263 ASP ARG LEU PHE ASP GLU LEU HIS ALA LEU GLY VAL LYS SEQRES 13 A 263 ILE ALA ILE ASP ASP PHE GLY THR GLY HIS SER SER LEU SEQRES 14 A 263 ALA TYR LEU ARG LYS PHE GLN VAL ASP CYS LEU LYS ILE SEQRES 15 A 263 ASP GLN SER PHE VAL ALA ARG ILE GLY ILE ASP THR LEU SEQRES 16 A 263 SER GLY HIS ILE LEU ASP SER ILE VAL GLU LEU SER ALA SEQRES 17 A 263 LYS LEU ASP LEU ASP ILE VAL ALA GLU GLY VAL GLU THR SEQRES 18 A 263 PRO GLU GLN ARG ASP TYR LEU ALA ALA ARG GLY VAL ASP SEQRES 19 A 263 TYR LEU GLN GLY TYR LEU ILE GLY ARG PRO MET PRO LEU SEQRES 20 A 263 GLU SER LEU LEU SER SER LEU THR VAL GLN GLU GLY GLN SEQRES 21 A 263 GLY ALA SER SEQRES 1 B 263 SER ARG ARG VAL ALA SER PRO SER SER GLU LEU ARG ARG SEQRES 2 B 263 ALA LEU GLU ALA ASN GLU PHE ILE PRO TYR TYR GLN PRO SEQRES 3 B 263 LEU SER PRO GLY GLN GLY GLY ARG TRP ILE GLY VAL GLU SEQRES 4 B 263 VAL LEU MET ARG TRP ARG HIS PRO ARG GLU GLY LEU ILE SEQRES 5 B 263 ARG PRO ASP LEU PHE ILE PRO PHE ALA GLU ARG SER GLY SEQRES 6 B 263 LEU ILE VAL PRO MET THR ARG ALA LEU MET ARG GLN VAL SEQRES 7 B 263 ALA GLU ASP LEU GLY GLY HIS ALA GLY LYS LEU GLU PRO SEQRES 8 B 263 GLY PHE HIS ILE GLY PHE ASN ILE SER ALA THR HIS CYS SEQRES 9 B 263 HIS GLU LEU ALA LEU VAL ASP ASP CYS ARG GLU LEU LEU SEQRES 10 B 263 ALA ALA PHE PRO PRO GLY HIS ILE THR LEU VAL LEU GLU SEQRES 11 B 263 LEU THR GLU ARG GLU LEU ILE GLU SER SER GLU VAL THR SEQRES 12 B 263 ASP ARG LEU PHE ASP GLU LEU HIS ALA LEU GLY VAL LYS SEQRES 13 B 263 ILE ALA ILE ASP ASP PHE GLY THR GLY HIS SER SER LEU SEQRES 14 B 263 ALA TYR LEU ARG LYS PHE GLN VAL ASP CYS LEU LYS ILE SEQRES 15 B 263 ASP GLN SER PHE VAL ALA ARG ILE GLY ILE ASP THR LEU SEQRES 16 B 263 SER GLY HIS ILE LEU ASP SER ILE VAL GLU LEU SER ALA SEQRES 17 B 263 LYS LEU ASP LEU ASP ILE VAL ALA GLU GLY VAL GLU THR SEQRES 18 B 263 PRO GLU GLN ARG ASP TYR LEU ALA ALA ARG GLY VAL ASP SEQRES 19 B 263 TYR LEU GLN GLY TYR LEU ILE GLY ARG PRO MET PRO LEU SEQRES 20 B 263 GLU SER LEU LEU SER SER LEU THR VAL GLN GLU GLY GLN SEQRES 21 B 263 GLY ALA SER HET CA A 301 1 HET CA A 302 1 HET CA A 303 1 HET CA B 301 1 HET CA B 302 1 HET CA B 303 1 HETNAM CA CALCIUM ION FORMUL 3 CA 6(CA 2+) FORMUL 9 HOH *319(H2 O) HELIX 1 AA1 SER A 6 ALA A 17 1 12 HELIX 2 AA2 PRO A 54 LEU A 56 5 3 HELIX 3 AA3 PHE A 57 GLY A 65 1 9 HELIX 4 AA4 LEU A 66 GLY A 84 1 19 HELIX 5 AA5 HIS A 85 LEU A 89 5 5 HELIX 6 AA6 ALA A 101 HIS A 105 5 5 HELIX 7 AA7 LEU A 107 ALA A 118 1 12 HELIX 8 AA8 GLU A 133 SER A 139 1 7 HELIX 9 AA9 VAL A 142 LEU A 153 1 12 HELIX 10 AB1 ALA A 170 PHE A 175 5 6 HELIX 11 AB2 ASP A 183 ARG A 189 1 7 HELIX 12 AB3 ASP A 193 LEU A 210 1 18 HELIX 13 AB4 THR A 221 ARG A 231 1 11 HELIX 14 AB5 PRO A 246 GLN A 260 1 15 HELIX 15 AB6 SER B 6 ALA B 17 1 12 HELIX 16 AB7 ARG B 53 LEU B 56 5 4 HELIX 17 AB8 PHE B 57 GLY B 65 1 9 HELIX 18 AB9 LEU B 66 GLY B 83 1 18 HELIX 19 AC1 GLY B 84 LEU B 89 5 6 HELIX 20 AC2 ALA B 101 GLU B 106 5 6 HELIX 21 AC3 LEU B 107 ALA B 119 1 13 HELIX 22 AC4 GLU B 133 ILE B 137 1 5 HELIX 23 AC5 SER B 140 LEU B 153 1 14 HELIX 24 AC6 ALA B 170 PHE B 175 1 6 HELIX 25 AC7 ASP B 183 ARG B 189 1 7 HELIX 26 AC8 ASP B 193 ASP B 211 1 19 HELIX 27 AC9 THR B 221 ARG B 231 1 11 HELIX 28 AD1 PRO B 246 GLY B 259 1 14 SHEET 1 AA110 GLY A 50 ILE A 52 0 SHEET 2 AA110 GLY A 37 HIS A 46 -1 N TRP A 44 O ILE A 52 SHEET 3 AA110 PHE A 93 ASN A 98 1 O GLY A 96 N VAL A 40 SHEET 4 AA110 ILE A 125 THR A 132 1 O GLU A 130 N PHE A 97 SHEET 5 AA110 LYS A 156 PHE A 162 1 O ALA A 158 N LEU A 129 SHEET 6 AA110 CYS A 179 ILE A 182 1 O LYS A 181 N PHE A 162 SHEET 7 AA110 ASP A 213 ALA A 216 1 O VAL A 215 N ILE A 182 SHEET 8 AA110 TYR A 235 LEU A 236 1 O TYR A 235 N ALA A 216 SHEET 9 AA110 PHE A 20 PRO A 29 -1 N SER A 28 O LEU A 236 SHEET 10 AA110 GLY A 37 HIS A 46 -1 O LEU A 41 N TYR A 23 SHEET 1 AA210 GLY B 50 ILE B 52 0 SHEET 2 AA210 GLY B 37 HIS B 46 -1 N HIS B 46 O GLY B 50 SHEET 3 AA210 PHE B 93 ASN B 98 1 O GLY B 96 N VAL B 40 SHEET 4 AA210 ILE B 125 THR B 132 1 O GLU B 130 N PHE B 97 SHEET 5 AA210 LYS B 156 PHE B 162 1 O LYS B 156 N LEU B 129 SHEET 6 AA210 CYS B 179 ILE B 182 1 O CYS B 179 N ILE B 159 SHEET 7 AA210 ASP B 213 ALA B 216 1 O VAL B 215 N ILE B 182 SHEET 8 AA210 TYR B 235 LEU B 236 1 O TYR B 235 N ALA B 216 SHEET 9 AA210 PHE B 20 PRO B 29 -1 N SER B 28 O LEU B 236 SHEET 10 AA210 GLY B 37 HIS B 46 -1 O LEU B 41 N TYR B 23 LINK OD1 ASN A 98 CA CA A 301 1555 1555 2.28 LINK O ILE A 99 CA CA A 301 1555 1555 2.44 LINK OE1 GLU A 135 CA CA A 301 1555 1555 2.56 LINK OE2 GLU A 135 CA CA A 301 1555 1555 2.41 LINK OD1 ASP A 160 CA CA A 303 1555 1555 2.37 LINK OD1 ASP A 161 CA CA A 303 1555 1555 2.31 LINK OE1 GLU A 217 CA CA A 303 1555 1555 2.38 LINK OE2 GLU A 217 CA CA A 303 1555 1555 2.48 LINK CA CA A 301 O HOH A 467 1555 1555 2.33 LINK CA CA A 301 O HOH A 520 1555 1555 2.49 LINK CA CA A 301 O HOH A 535 1555 1555 2.46 LINK CA CA A 302 O HOH A 543 1555 1555 2.82 LINK CA CA A 303 O HOH A 427 1555 1555 2.34 LINK CA CA A 303 O HOH A 489 1555 1555 2.32 LINK CA CA A 303 O HOH A 514 1555 1555 2.43 LINK OD1 ASN B 98 CA CA B 301 1555 1555 2.32 LINK O ILE B 99 CA CA B 301 1555 1555 2.39 LINK OE1 GLU B 135 CA CA B 301 1555 1555 2.63 LINK OE2 GLU B 135 CA CA B 301 1555 1555 2.42 LINK OD1 ASP B 160 CA CA B 303 1555 1555 2.40 LINK OD1 ASP B 161 CA CA B 303 1555 1555 2.40 LINK OE1 GLU B 217 CA CA B 303 1555 1555 2.48 LINK OE2 GLU B 217 CA CA B 303 1555 1555 2.50 LINK CA CA B 301 O HOH B 401 1555 1555 2.24 LINK CA CA B 301 O HOH B 415 1555 1555 2.44 LINK CA CA B 301 O HOH B 456 1555 1555 2.43 LINK CA CA B 301 O HOH B 529 1555 1555 2.33 LINK CA CA B 302 O HOH B 531 1555 1555 3.10 LINK CA CA B 302 O HOH B 546 1555 1555 3.08 LINK CA CA B 303 O HOH B 481 1555 1555 2.46 LINK CA CA B 303 O HOH B 487 1555 1555 2.32 LINK CA CA B 303 O HOH B 503 1555 1555 2.20 SITE 1 AC1 6 ASN A 98 ILE A 99 GLU A 135 HOH A 467 SITE 2 AC1 6 HOH A 520 HOH A 535 SITE 1 AC2 4 GLN A 25 GLY A 218 GLN A 237 HOH A 543 SITE 1 AC3 6 ASP A 160 ASP A 161 GLU A 217 HOH A 514 SITE 2 AC3 6 HOH A 427 HOH A 489 SITE 1 AC4 7 ASN B 98 ILE B 99 GLU B 135 HOH B 456 SITE 2 AC4 7 HOH B 415 HOH B 529 HOH B 401 SITE 1 AC5 5 GLN B 25 GLY B 218 GLN B 237 HOH B 531 SITE 2 AC5 5 HOH B 546 SITE 1 AC6 6 ASP B 160 ASP B 161 GLU B 217 HOH B 487 SITE 2 AC6 6 HOH B 503 HOH B 481 CRYST1 112.440 59.820 96.690 90.00 116.94 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008894 0.000000 0.004520 0.00000 SCALE2 0.000000 0.016717 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011601 0.00000