HEADER MEMBRANE PROTEIN 18-FEB-15 4YAY
TITLE XFEL STRUCTURE OF HUMAN ANGIOTENSIN RECEPTOR
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: SOLUBLE CYTOCHROME B562,TYPE-1 ANGIOTENSIN II RECEPTOR;
COMPND 3 CHAIN: A;
COMPND 4 SYNONYM: CYTOCHROME B-562,AT1AR,AT1BR,ANGIOTENSIN II TYPE-1 RECEPTOR,
COMPND 5 AT1;
COMPND 6 ENGINEERED: YES;
COMPND 7 MUTATION: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI, HOMO SAPIENS;
SOURCE 3 ORGANISM_COMMON: HUMAN;
SOURCE 4 ORGANISM_TAXID: 562, 9606;
SOURCE 5 GENE: CYBC, AGTR1, AGTR1A, AGTR1B, AT2R1, AT2R1B;
SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA;
SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108;
SOURCE 8 EXPRESSION_SYSTEM_STRAIN: SF9;
SOURCE 9 EXPRESSION_SYSTEM_CELL_LINE: SF9;
SOURCE 10 EXPRESSION_SYSTEM_ATCC_NUMBER: CRL-1711;
SOURCE 11 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;
SOURCE 12 EXPRESSION_SYSTEM_PLASMID: PFASTBAC
KEYWDS XFEL, SERIAL FEMTOSECOND CRYSTALLOGRAPHY, HUMAN ANGIOTENSIN RECEPTOR
KEYWDS 2 AT1R, BRIL, G PROTEIN-COUPLED RECEPTOR, GPCR, GPCR NETWORK, LIPIDIC
KEYWDS 3 CUBIC PHASE, LCP, MEMBRANE PROTEIN, STRUCTURAL GENOMICS, ZD7155,
KEYWDS 4 ANGIOTENSIN RECEPTOR BLOCKER, ROOM TEMPERATURE, PSI-BIOLOGY
EXPDTA X-RAY DIFFRACTION
AUTHOR H.ZHANG,H.UNAL,C.GATI,G.W.HAN,N.A.ZATSEPIN,D.JAMES,D.WANG,G.NELSON,
AUTHOR 2 U.WEIERSTALL,M.MESSERSCHMIDT,G.J.WILLIAMS,S.BOUTET,O.M.YEFANOV,
AUTHOR 3 T.A.WHITE,W.LIU,A.ISHCHENKO,K.C.TIRUPULA,R.DESNOYER,M.C.SAWAYA,Q.XU,
AUTHOR 4 J.COE,C.E.CORNRAD,P.FROMME,R.C.STEVENS,V.KATRITCH,S.S.KARNIK,
AUTHOR 5 V.CHEREZOV,GPCR NETWORK (GPCR)
REVDAT 10 23-OCT-24 4YAY 1 REMARK
REVDAT 9 16-AUG-23 4YAY 1 REMARK
REVDAT 8 25-DEC-19 4YAY 1 REMARK
REVDAT 7 14-FEB-18 4YAY 1 REMARK
REVDAT 6 22-NOV-17 4YAY 1 REMARK
REVDAT 5 06-SEP-17 4YAY 1 SOURCE REMARK
REVDAT 4 27-MAY-15 4YAY 1 JRNL
REVDAT 3 13-MAY-15 4YAY 1 JRNL
REVDAT 2 06-MAY-15 4YAY 1 COMPND
REVDAT 1 22-APR-15 4YAY 0
JRNL AUTH H.ZHANG,H.UNAL,C.GATI,G.W.HAN,W.LIU,N.A.ZATSEPIN,D.JAMES,
JRNL AUTH 2 D.WANG,G.NELSON,U.WEIERSTALL,M.R.SAWAYA,Q.XU,
JRNL AUTH 3 M.MESSERSCHMIDT,G.J.WILLIAMS,S.BOUTET,O.M.YEFANOV,T.A.WHITE,
JRNL AUTH 4 C.WANG,A.ISHCHENKO,K.C.TIRUPULA,R.DESNOYER,J.COE,C.E.CONRAD,
JRNL AUTH 5 P.FROMME,R.C.STEVENS,V.KATRITCH,S.S.KARNIK,V.CHEREZOV
JRNL TITL STRUCTURE OF THE ANGIOTENSIN RECEPTOR REVEALED BY SERIAL
JRNL TITL 2 FEMTOSECOND CRYSTALLOGRAPHY.
JRNL REF CELL V. 161 833 2015
JRNL REFN ISSN 1097-4172
JRNL PMID 25913193
JRNL DOI 10.1016/J.CELL.2015.04.011
REMARK 2
REMARK 2 RESOLUTION. 2.90 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : BUSTER 2.10.0
REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER,
REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN,
REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.90
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.91
REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000
REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0
REMARK 3 NUMBER OF REFLECTIONS : 11167
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT
REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM
REMARK 3 R VALUE (WORKING + TEST SET) : 0.231
REMARK 3 R VALUE (WORKING SET) : 0.228
REMARK 3 FREE R VALUE : 0.274
REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.160
REMARK 3 FREE R VALUE TEST SET COUNT : 576
REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL
REMARK 3
REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN.
REMARK 3 TOTAL NUMBER OF BINS USED : 6
REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.90
REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 3.18
REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.99
REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2650
REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2573
REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2500
REMARK 3 BIN R VALUE (WORKING SET) : 0.2539
REMARK 3 BIN FREE R VALUE : 0.3131
REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.66
REMARK 3 BIN FREE R VALUE TEST SET COUNT : 150
REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL
REMARK 3
REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.
REMARK 3 PROTEIN ATOMS : 3077
REMARK 3 NUCLEIC ACID ATOMS : 0
REMARK 3 HETEROGEN ATOMS : 33
REMARK 3 SOLVENT ATOMS : 0
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : 76.13
REMARK 3 MEAN B VALUE (OVERALL, A**2) : 95.45
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : -11.85210
REMARK 3 B22 (A**2) : -4.07880
REMARK 3 B33 (A**2) : 15.93090
REMARK 3 B12 (A**2) : 0.00000
REMARK 3 B13 (A**2) : -6.64070
REMARK 3 B23 (A**2) : 0.00000
REMARK 3
REMARK 3 ESTIMATED COORDINATE ERROR.
REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.612
REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL
REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.406
REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL
REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL
REMARK 3
REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797
REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601
REMARK 3
REMARK 3 CORRELATION COEFFICIENTS.
REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.902
REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.851
REMARK 3
REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15
REMARK 3 TERM COUNT WEIGHT FUNCTION.
REMARK 3 BOND LENGTHS : 3187 ; 2.000 ; HARMONIC
REMARK 3 BOND ANGLES : 4336 ; 2.000 ; HARMONIC
REMARK 3 TORSION ANGLES : 1448 ; 4.000 ; SINUSOIDAL
REMARK 3 TRIGONAL CARBON PLANES : 54 ; 2.000 ; HARMONIC
REMARK 3 GENERAL PLANES : 460 ; 5.000 ; HARMONIC
REMARK 3 ISOTROPIC THERMAL FACTORS : 3187 ; 20.000 ; HARMONIC
REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL
REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL
REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL
REMARK 3 CHIRAL IMPROPER TORSION : 436 ; 5.000 ; SEMIHARMONIC
REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL
REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL
REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL
REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL
REMARK 3 IDEAL-DIST CONTACT TERM : 3683 ; 4.000 ; SEMIHARMONIC
REMARK 3
REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES.
REMARK 3 BOND LENGTHS (A) : 0.010
REMARK 3 BOND ANGLES (DEGREES) : 0.95
REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 1.99
REMARK 3 OTHER TORSION ANGLES (DEGREES) : 2.46
REMARK 3
REMARK 3 TLS DETAILS
REMARK 3 NUMBER OF TLS GROUPS : 2
REMARK 3
REMARK 3 TLS GROUP : 1
REMARK 3 SELECTION: { A|1002-1106 }
REMARK 3 ORIGIN FOR THE GROUP (A): 2.9499 7.9948 14.0710
REMARK 3 T TENSOR
REMARK 3 T11: 0.2884 T22: 0.1755
REMARK 3 T33: -0.3102 T12: -0.0256
REMARK 3 T13: 0.0301 T23: -0.0776
REMARK 3 L TENSOR
REMARK 3 L11: 0.3611 L22: 1.1373
REMARK 3 L33: 4.5097 L12: -1.3570
REMARK 3 L13: -0.4547 L23: 2.7254
REMARK 3 S TENSOR
REMARK 3 S11: -0.0370 S12: 0.2550 S13: 0.2096
REMARK 3 S21: 0.1181 S22: -0.0836 S23: -0.1595
REMARK 3 S31: -0.0481 S32: 0.2300 S33: 0.1206
REMARK 3
REMARK 3 TLS GROUP : 2
REMARK 3 SELECTION: { A| 12- 317 }
REMARK 3 ORIGIN FOR THE GROUP (A): -15.3850 11.0820 52.2432
REMARK 3 T TENSOR
REMARK 3 T11: 0.2481 T22: -0.3040
REMARK 3 T33: -0.2207 T12: -0.1255
REMARK 3 T13: 0.1705 T23: -0.0425
REMARK 3 L TENSOR
REMARK 3 L11: 1.0532 L22: 0.7978
REMARK 3 L33: 8.2475 L12: -0.7640
REMARK 3 L13: 0.4085 L23: -0.4000
REMARK 3 S TENSOR
REMARK 3 S11: 0.0292 S12: -0.1243 S13: 0.0783
REMARK 3 S21: -0.4931 S22: 0.1735 S23: -0.3538
REMARK 3 S31: 0.0270 S32: -0.1706 S33: -0.2026
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 4YAY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-FEB-15.
REMARK 100 THE DEPOSITION ID IS D_1000206382.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : 01-FEB-14
REMARK 200 TEMPERATURE (KELVIN) : 294
REMARK 200 PH : 5.0
REMARK 200 NUMBER OF CRYSTALS USED : 457275
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : N
REMARK 200 RADIATION SOURCE : FREE ELECTRON LASER
REMARK 200 BEAMLINE : CXI
REMARK 200 X-RAY GENERATOR MODEL : SLAC LCLS BEAMLINE CXI
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : 1.56
REMARK 200 MONOCHROMATOR : MIRRORS
REMARK 200 OPTICS : NULL
REMARK 200
REMARK 200 DETECTOR TYPE : PIXEL
REMARK 200 DETECTOR MANUFACTURER : CS-PAD CXI-1
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : CRYSTFEL
REMARK 200 DATA SCALING SOFTWARE : CRYSTFEL
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 11190
REMARK 200 RESOLUTION RANGE HIGH (A) : 2.900
REMARK 200 RESOLUTION RANGE LOW (A) : 32.629
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0
REMARK 200 DATA REDUNDANCY : 1288.
REMARK 200 R MERGE (I) : NULL
REMARK 200 R SYM (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 8.2000
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.90
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.00
REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0
REMARK 200 DATA REDUNDANCY IN SHELL : 215.0
REMARK 200 R MERGE FOR SHELL (I) : NULL
REMARK 200 R SYM FOR SHELL (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR SHELL : 0.840
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT
REMARK 200 SOFTWARE USED: PHASER
REMARK 200 STARTING MODEL: GPCR HYBRID MODEL
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 52.92
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.61
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM SODIUM CITRATE, PH 5.0, 450 MM
REMARK 280 NH4H2PO4, 28% (V/V) PEG400 AND 4% (V/V) DMSO, LIPIDIC CUBIC
REMARK 280 PHASE, TEMPERATURE 294K
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -X,Y,-Z
REMARK 290 3555 X+1/2,Y+1/2,Z
REMARK 290 4555 -X+1/2,Y+1/2,-Z
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000
REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 36.40000
REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 20.50000
REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 36.40000
REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 20.50000
REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 300 REMARK: AUTHORS STATE THAT THE BIOLOGICAL UNIT IS UNKNOWN
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465
REMARK 465 MISSING RESIDUES
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)
REMARK 465
REMARK 465 M RES C SSSEQI
REMARK 465 ALA A 1001
REMARK 465 GLU A 173
REMARK 465 ASN A 174
REMARK 465 THR A 175
REMARK 465 ASN A 176
REMARK 465 SER A 186
REMARK 465 GLN A 187
REMARK 465 ASN A 188
REMARK 465 SER A 189
REMARK 465 ALA A 225
REMARK 465 TYR A 226
REMARK 465 GLU A 227
REMARK 465 ILE A 228
REMARK 465 GLN A 229
REMARK 465 LYS A 230
REMARK 465 ASN A 231
REMARK 465 LYS A 232
REMARK 465 PRO A 233
REMARK 465 ARG A 234
REMARK 465 LYS A 318
REMARK 465 TYR A 319
REMARK 470
REMARK 470 MISSING ATOM
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;
REMARK 470 I=INSERTION CODE):
REMARK 470 M RES CSSEQI ATOMS
REMARK 470 LEU A 13 CG CD1 CD2
REMARK 470 ASN A 14 CG OD1 ND2
REMARK 470 LYS A 20 CG CD CE NZ
REMARK 470 LYS A 135 CG CD CE NZ
REMARK 470 SER A 136 OG
REMARK 470 ARG A 137 CG CD NE CZ NH1 NH2
REMARK 470 ILE A 177 CG1 CG2 CD1
REMARK 470 GLU A 185 CG CD OE1 OE2
REMARK 470 LEU A 191 CD1 CD2
REMARK 470 ILE A 193 CG2 CD1
REMARK 470 THR A 198 OG1 CG2
REMARK 470 LYS A 199 CD CE NZ
REMARK 470 ILE A 201 CD1
REMARK 470 LEU A 205 CD1 CD2
REMARK 470 PHE A 206 CG CD1 CD2 CE1 CE2 CZ
REMARK 470 PHE A 208 CD1 CD2 CE1 CE2 CZ
REMARK 470 LYS A 224 CG CD CE NZ
REMARK 470 ASN A 235 CG OD1 ND2
REMARK 470 LEU A 305 CG CD1 CD2
REMARK 470 LYS A 308 CG CD CE NZ
REMARK 470 TYR A 312 CG CD1 CD2 CE1 CE2 CZ OH
REMARK 470 GLN A 315 CG CD OE1 NE2
REMARK 470 LEU A 317 CG CD1 CD2
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 PRO A1053 36.96 -73.89
REMARK 500 ASP A1054 -12.85 -140.38
REMARK 500 SER A 16 -134.65 45.59
REMARK 500 ASP A 17 -67.78 65.08
REMARK 500 ARG A 23 68.78 -100.79
REMARK 500 PHE A 204 -42.54 -158.36
REMARK 500 ARG A 272 77.62 -109.45
REMARK 500 LEU A 316 -76.78 -71.27
REMARK 500
REMARK 500 REMARK: NULL
REMARK 800
REMARK 800 SITE
REMARK 800 SITE_IDENTIFIER: AC1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue ZD7 A 1201
REMARK 900
REMARK 900 RELATED ENTRIES
REMARK 900 RELATED ID: GPCR-11 RELATED DB: TARGETTRACK
DBREF 4YAY A 1001 1106 UNP P0ABE7 C562_ECOLX 23 128
DBREF 4YAY A 12 319 UNP P30556 AGTR1_HUMAN 2 319
SEQADV 4YAY TRP A 1007 UNP P0ABE7 MET 29 ENGINEERED MUTATION
SEQADV 4YAY ILE A 1102 UNP P0ABE7 ILE 124 ENGINEERED MUTATION
SEQADV 4YAY LEU A 1106 UNP P0ABE7 LEU 128 ENGINEERED MUTATION
SEQADV 4YAY A UNP P30556 THR 7 DELETION
SEQADV 4YAY A UNP P30556 GLU 8 DELETION
SEQADV 4YAY A UNP P30556 ASP 9 DELETION
SEQADV 4YAY A UNP P30556 GLY 10 DELETION
SEQADV 4YAY A UNP P30556 ILE 11 DELETION
SEQADV 4YAY A UNP P30556 LYS 12 DELETION
SEQADV 4YAY A UNP P30556 ARG 13 DELETION
SEQADV 4YAY A UNP P30556 ILE 14 DELETION
SEQADV 4YAY A UNP P30556 GLN 15 DELETION
SEQADV 4YAY A UNP P30556 ASP 16 DELETION
SEQRES 1 A 414 ALA ASP LEU GLU ASP ASN TRP GLU THR LEU ASN ASP ASN
SEQRES 2 A 414 LEU LYS VAL ILE GLU LYS ALA ASP ASN ALA ALA GLN VAL
SEQRES 3 A 414 LYS ASP ALA LEU THR LYS MET ARG ALA ALA ALA LEU ASP
SEQRES 4 A 414 ALA GLN LYS ALA THR PRO PRO LYS LEU GLU ASP LYS SER
SEQRES 5 A 414 PRO ASP SER PRO GLU MET LYS ASP PHE ARG HIS GLY PHE
SEQRES 6 A 414 ASP ILE LEU VAL GLY GLN ILE ASP ASP ALA LEU LYS LEU
SEQRES 7 A 414 ALA ASN GLU GLY LYS VAL LYS GLU ALA GLN ALA ALA ALA
SEQRES 8 A 414 GLU GLN LEU LYS THR THR ARG ASN ALA TYR ILE GLN LYS
SEQRES 9 A 414 TYR LEU ILE LEU ASN SER SER ASP CYS PRO LYS ALA GLY
SEQRES 10 A 414 ARG HIS ASN TYR ILE PHE VAL MET ILE PRO THR LEU TYR
SEQRES 11 A 414 SER ILE ILE PHE VAL VAL GLY ILE PHE GLY ASN SER LEU
SEQRES 12 A 414 VAL VAL ILE VAL ILE TYR PHE TYR MET LYS LEU LYS THR
SEQRES 13 A 414 VAL ALA SER VAL PHE LEU LEU ASN LEU ALA LEU ALA ASP
SEQRES 14 A 414 LEU CYS PHE LEU LEU THR LEU PRO LEU TRP ALA VAL TYR
SEQRES 15 A 414 THR ALA MET GLU TYR ARG TRP PRO PHE GLY ASN TYR LEU
SEQRES 16 A 414 CYS LYS ILE ALA SER ALA SER VAL SER PHE ASN LEU TYR
SEQRES 17 A 414 ALA SER VAL PHE LEU LEU THR CYS LEU SER ILE ASP ARG
SEQRES 18 A 414 TYR LEU ALA ILE VAL HIS PRO MET LYS SER ARG LEU ARG
SEQRES 19 A 414 ARG THR MET LEU VAL ALA LYS VAL THR CYS ILE ILE ILE
SEQRES 20 A 414 TRP LEU LEU ALA GLY LEU ALA SER LEU PRO ALA ILE ILE
SEQRES 21 A 414 HIS ARG ASN VAL PHE PHE ILE GLU ASN THR ASN ILE THR
SEQRES 22 A 414 VAL CYS ALA PHE HIS TYR GLU SER GLN ASN SER THR LEU
SEQRES 23 A 414 PRO ILE GLY LEU GLY LEU THR LYS ASN ILE LEU GLY PHE
SEQRES 24 A 414 LEU PHE PRO PHE LEU ILE ILE LEU THR SER TYR THR LEU
SEQRES 25 A 414 ILE TRP LYS ALA LEU LYS LYS ALA TYR GLU ILE GLN LYS
SEQRES 26 A 414 ASN LYS PRO ARG ASN ASP ASP ILE PHE LYS ILE ILE MET
SEQRES 27 A 414 ALA ILE VAL LEU PHE PHE PHE PHE SER TRP ILE PRO HIS
SEQRES 28 A 414 GLN ILE PHE THR PHE LEU ASP VAL LEU ILE GLN LEU GLY
SEQRES 29 A 414 ILE ILE ARG ASP CYS ARG ILE ALA ASP ILE VAL ASP THR
SEQRES 30 A 414 ALA MET PRO ILE THR ILE CYS ILE ALA TYR PHE ASN ASN
SEQRES 31 A 414 CYS LEU ASN PRO LEU PHE TYR GLY PHE LEU GLY LYS LYS
SEQRES 32 A 414 PHE LYS ARG TYR PHE LEU GLN LEU LEU LYS TYR
HET ZD7 A1201 33
HETNAM ZD7 5,7-DIETHYL-1-{[2'-(1H-TETRAZOL-5-YL)BIPHENYL-4-
HETNAM 2 ZD7 YL]METHYL}-3,4-DIHYDRO-1,6-NAPHTHYRIDIN-2(1H)-ONE
FORMUL 2 ZD7 C26 H26 N6 O
HELIX 1 AA1 ASP A 1002 ALA A 1020 1 19
HELIX 2 AA2 ASN A 1022 LYS A 1042 1 21
HELIX 3 AA3 SER A 1055 GLY A 1082 1 28
HELIX 4 AA4 VAL A 1084 GLU A 1092 1 9
HELIX 5 AA5 GLN A 1093 LEU A 1106 1 14
HELIX 6 AA6 TYR A 26 TYR A 56 1 31
HELIX 7 AA7 THR A 61 MET A 90 1 30
HELIX 8 AA8 ASN A 98 VAL A 131 1 34
HELIX 9 AA9 ARG A 137 SER A 160 1 24
HELIX 10 AB1 SER A 160 HIS A 166 1 7
HELIX 11 AB2 PRO A 192 PHE A 204 1 13
HELIX 12 AB3 PHE A 204 ALA A 221 1 18
HELIX 13 AB4 ASP A 236 GLY A 269 1 34
HELIX 14 AB5 ASP A 273 ALA A 291 1 19
HELIX 15 AB6 PHE A 293 ASN A 298 1 6
HELIX 16 AB7 PRO A 299 PHE A 304 5 6
HELIX 17 AB8 LEU A 305 LEU A 317 1 13
SHEET 1 AA1 2 ARG A 167 PHE A 170 0
SHEET 2 AA1 2 VAL A 179 PHE A 182 -1 O VAL A 179 N PHE A 170
SSBOND 1 CYS A 18 CYS A 274 1555 1555 2.03
SSBOND 2 CYS A 101 CYS A 180 1555 1555 2.03
SITE 1 AC1 12 TYR A 35 TRP A 84 THR A 88 SER A 105
SITE 2 AC1 12 VAL A 108 SER A 109 LEU A 112 ALA A 163
SITE 3 AC1 12 ARG A 167 PHE A 182 ILE A 288 TYR A 292
CRYST1 72.800 41.000 167.700 90.00 99.40 90.00 C 1 2 1 4
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.013736 0.000000 0.002274 0.00000
SCALE2 0.000000 0.024390 0.000000 0.00000
SCALE3 0.000000 0.000000 0.006044 0.00000