HEADER TRANSFERASE 22-FEB-15 4YDO TITLE CRYSTAL STRUCTURE OF CANDIDA ALBICANS PROTEIN FARNESYLTRANSFERASE IN TITLE 2 APO FORM COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN FARNESYLTRANSFERASE/GERANYLGERANYLTRANSFERASE TYPE- COMPND 3 1 SUBUNIT ALPHA; COMPND 4 CHAIN: A; COMPND 5 SYNONYM: CAAX FARNESYLTRANSFERASE SUBUNIT ALPHA,FTASE-ALPHA,RAS COMPND 6 PROTEINS PRENYLTRANSFERASE SUBUNIT ALPHA,TYPE I PROTEIN GERANYL- COMPND 7 GERANYLTRANSFERASE SUBUNIT ALPHA,GGTASE-I-ALPHA; COMPND 8 EC: 2.5.1.58,2.5.1.59; COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 2; COMPND 11 MOLECULE: UNCHARACTERIZED PROTEIN; COMPND 12 CHAIN: B; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CANDIDA ALBICANS; SOURCE 3 ORGANISM_COMMON: YEAST; SOURCE 4 ORGANISM_TAXID: 5476; SOURCE 5 GENE: RAM2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: CANDIDA ALBICANS; SOURCE 10 ORGANISM_COMMON: YEAST; SOURCE 11 ORGANISM_TAXID: 237561; SOURCE 12 STRAIN: SC5314 / ATCC MYA-2876; SOURCE 13 GENE: RAM1, CAO19.12513; SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS FARNESYL TRANSFERASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR S.KUMAR,M.F.MABANGLO,M.A.HAST,Y.SHI,L.S.BEESE REVDAT 4 27-SEP-23 4YDO 1 REMARK REVDAT 3 30-MAR-22 4YDO 1 LINK REVDAT 2 13-SEP-17 4YDO 1 REMARK REVDAT 1 06-JUL-16 4YDO 0 JRNL AUTH S.KUMAR,M.F.MABANGLO,M.A.HAST,Y.SHI,L.S.BEESE JRNL TITL CRYSTAL STRUCTURE OF CANDIDA ALBICANS PROTEIN JRNL TITL 2 FARNESYLTRANSFERASE IN APO FORM JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: DEV_1839) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.30 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 3 NUMBER OF REFLECTIONS : 18504 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.229 REMARK 3 R VALUE (WORKING SET) : 0.226 REMARK 3 FREE R VALUE : 0.249 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.990 REMARK 3 FREE R VALUE TEST SET COUNT : 1849 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 43.3055 - 7.0447 0.96 1378 152 0.1934 0.2137 REMARK 3 2 7.0447 - 5.5954 0.97 1301 145 0.2355 0.2834 REMARK 3 3 5.5954 - 4.8892 0.99 1299 144 0.2143 0.2263 REMARK 3 4 4.8892 - 4.4427 0.98 1271 141 0.1936 0.2048 REMARK 3 5 4.4427 - 4.1245 0.99 1285 143 0.1980 0.2140 REMARK 3 6 4.1245 - 3.8815 0.99 1264 140 0.2194 0.2519 REMARK 3 7 3.8815 - 3.6872 0.99 1274 142 0.2341 0.2339 REMARK 3 8 3.6872 - 3.5268 1.00 1272 141 0.2542 0.2654 REMARK 3 9 3.5268 - 3.3911 1.00 1268 141 0.2541 0.2830 REMARK 3 10 3.3911 - 3.2741 1.00 1263 140 0.2751 0.3520 REMARK 3 11 3.2741 - 3.1718 1.00 1264 141 0.3011 0.3123 REMARK 3 12 3.1718 - 3.0811 1.00 1266 141 0.3129 0.3368 REMARK 3 13 3.0811 - 3.0000 1.00 1250 138 0.3524 0.4168 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.420 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.080 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 6035 REMARK 3 ANGLE : 0.839 8171 REMARK 3 CHIRALITY : 0.034 889 REMARK 3 PLANARITY : 0.005 1039 REMARK 3 DIHEDRAL : 12.817 2202 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN 'A' AND RESID 2 THROUGH 304) REMARK 3 ORIGIN FOR THE GROUP (A): 18.5152 -40.1885 195.5158 REMARK 3 T TENSOR REMARK 3 T11: 0.4823 T22: 0.4580 REMARK 3 T33: 0.5010 T12: 0.0016 REMARK 3 T13: -0.0017 T23: 0.0858 REMARK 3 L TENSOR REMARK 3 L11: 2.0314 L22: 2.1214 REMARK 3 L33: 2.5917 L12: 0.4763 REMARK 3 L13: -0.0995 L23: -0.5884 REMARK 3 S TENSOR REMARK 3 S11: 0.3472 S12: -0.1636 S13: -0.2443 REMARK 3 S21: 0.4275 S22: -0.1215 S23: -0.0469 REMARK 3 S31: -0.3397 S32: -0.3008 S33: -0.1867 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN 'B' AND RESID 110 THROUGH 580) REMARK 3 ORIGIN FOR THE GROUP (A): 25.0777 -25.8884 209.5816 REMARK 3 T TENSOR REMARK 3 T11: 1.0314 T22: 0.4965 REMARK 3 T33: 0.5191 T12: -0.0738 REMARK 3 T13: 0.0285 T23: -0.0574 REMARK 3 L TENSOR REMARK 3 L11: 2.5221 L22: 2.0617 REMARK 3 L33: 2.0296 L12: 0.2816 REMARK 3 L13: 0.1493 L23: -0.2372 REMARK 3 S TENSOR REMARK 3 S11: 0.3296 S12: -0.5112 S13: 0.2173 REMARK 3 S21: 0.7300 S22: -0.1505 S23: -0.1831 REMARK 3 S31: -0.7025 S32: -0.0428 S33: -0.1027 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4YDO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-FEB-15. REMARK 100 THE DEPOSITION ID IS D_1000207271. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-OCT-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18560 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.000 REMARK 200 RESOLUTION RANGE LOW (A) : 52.820 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 200 DATA REDUNDANCY : 7.970 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.09500 REMARK 200 FOR THE DATA SET : 16.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.10 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.0 REMARK 200 DATA REDUNDANCY IN SHELL : 8.10 REMARK 200 R MERGE FOR SHELL (I) : 0.79000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.450 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4YDE REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.80 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.15 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 9%-13% PEG 2050 CHIPS, 100 MM HEPES PH REMARK 280 7.2 100 MM CACL2, 5 UM ZNCL2, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+3/4 REMARK 290 4555 Y,-X,Z+1/4 REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z+1/2 REMARK 290 7555 Y,X,-Z+1/4 REMARK 290 8555 -Y,-X,-Z+3/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 94.54100 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 141.81150 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 47.27050 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 94.54100 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 47.27050 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 141.81150 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6900 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 29890 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -82.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -23 REMARK 465 GLY A -22 REMARK 465 SER A -21 REMARK 465 SER A -20 REMARK 465 HIS A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 SER A -13 REMARK 465 GLN A -12 REMARK 465 ASP A -11 REMARK 465 PRO A -10 REMARK 465 ASN A -9 REMARK 465 SER A -8 REMARK 465 SER A -7 REMARK 465 SER A -6 REMARK 465 ALA A -5 REMARK 465 ARG A -4 REMARK 465 LEU A -3 REMARK 465 GLN A -2 REMARK 465 VAL A -1 REMARK 465 ASP A 0 REMARK 465 MET A 1 REMARK 465 SER A 305 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 GLN B 3 REMARK 465 ASP B 4 REMARK 465 SER B 5 REMARK 465 ASN B 6 REMARK 465 ALA B 7 REMARK 465 LYS B 8 REMARK 465 ILE B 9 REMARK 465 ASN B 10 REMARK 465 TYR B 11 REMARK 465 LEU B 12 REMARK 465 LEU B 13 REMARK 465 ASN B 14 REMARK 465 ILE B 15 REMARK 465 ILE B 16 REMARK 465 ASN B 17 REMARK 465 SER B 18 REMARK 465 GLN B 19 REMARK 465 ARG B 20 REMARK 465 LYS B 21 REMARK 465 PRO B 22 REMARK 465 PRO B 23 REMARK 465 ILE B 24 REMARK 465 ILE B 25 REMARK 465 ASN B 26 REMARK 465 ASN B 27 REMARK 465 PRO B 28 REMARK 465 SER B 29 REMARK 465 ILE B 30 REMARK 465 SER B 31 REMARK 465 SER B 32 REMARK 465 ASN B 33 REMARK 465 THR B 34 REMARK 465 ASN B 35 REMARK 465 ARG B 36 REMARK 465 VAL B 37 REMARK 465 ARG B 38 REMARK 465 THR B 39 REMARK 465 LYS B 40 REMARK 465 THR B 41 REMARK 465 LYS B 42 REMARK 465 THR B 43 REMARK 465 ARG B 44 REMARK 465 THR B 45 REMARK 465 ARG B 46 REMARK 465 THR B 47 REMARK 465 SER B 48 REMARK 465 PRO B 49 REMARK 465 ASN B 50 REMARK 465 SER B 51 REMARK 465 LYS B 52 REMARK 465 THR B 53 REMARK 465 LYS B 54 REMARK 465 ILE B 55 REMARK 465 LYS B 56 REMARK 465 THR B 57 REMARK 465 LYS B 58 REMARK 465 THR B 59 REMARK 465 MET B 60 REMARK 465 ASN B 61 REMARK 465 THR B 62 REMARK 465 MET B 63 REMARK 465 LYS B 64 REMARK 465 THR B 65 REMARK 465 ASN B 66 REMARK 465 ASN B 67 REMARK 465 ARG B 68 REMARK 465 ASN B 69 REMARK 465 SER B 70 REMARK 465 ILE B 71 REMARK 465 LEU B 72 REMARK 465 THR B 73 REMARK 465 GLU B 74 REMARK 465 THR B 75 REMARK 465 GLU B 76 REMARK 465 GLU B 77 REMARK 465 LEU B 78 REMARK 465 PHE B 79 REMARK 465 THR B 80 REMARK 465 ASN B 81 REMARK 465 GLU B 82 REMARK 465 SER B 83 REMARK 465 GLN B 84 REMARK 465 ILE B 85 REMARK 465 ILE B 86 REMARK 465 GLU B 87 REMARK 465 SER B 88 REMARK 465 PHE B 89 REMARK 465 ASN B 90 REMARK 465 SER B 91 REMARK 465 ASN B 92 REMARK 465 CYS B 93 REMARK 465 THR B 94 REMARK 465 ILE B 95 REMARK 465 VAL B 96 REMARK 465 ASP B 97 REMARK 465 SER B 98 REMARK 465 ASN B 99 REMARK 465 SER B 100 REMARK 465 ASP B 101 REMARK 465 PHE B 102 REMARK 465 HIS B 103 REMARK 465 ASP B 104 REMARK 465 LYS B 105 REMARK 465 LEU B 106 REMARK 465 HIS B 107 REMARK 465 VAL B 108 REMARK 465 TYR B 109 REMARK 465 GLN B 147 REMARK 465 GLU B 148 REMARK 465 GLN B 149 REMARK 465 GLN B 150 REMARK 465 ASN B 151 REMARK 465 ASP B 152 REMARK 465 GLU B 153 REMARK 465 ASP B 154 REMARK 465 GLU B 155 REMARK 465 ASP B 156 REMARK 465 GLU B 157 REMARK 465 ASP B 158 REMARK 465 GLU B 159 REMARK 465 ASP B 160 REMARK 465 ASP B 161 REMARK 465 GLU B 162 REMARK 465 LEU B 163 REMARK 465 TYR B 328 REMARK 465 GLU B 329 REMARK 465 GLU B 330 REMARK 465 ASN B 331 REMARK 465 SER B 332 REMARK 465 SER B 333 REMARK 465 SER B 334 REMARK 465 PRO B 335 REMARK 465 GLU B 336 REMARK 465 GLU B 337 REMARK 465 SER B 390 REMARK 465 SER B 391 REMARK 465 GLY B 392 REMARK 465 SER B 393 REMARK 465 THR B 394 REMARK 465 SER B 395 REMARK 465 SER B 396 REMARK 465 LEU B 397 REMARK 465 SER B 398 REMARK 465 ASN B 399 REMARK 465 SER B 452 REMARK 465 GLN B 453 REMARK 465 GLY B 454 REMARK 465 GLN B 455 REMARK 465 GLY B 456 REMARK 465 ARG B 530 REMARK 465 GLU B 531 REMARK 465 GLU B 532 REMARK 465 GLU B 533 REMARK 465 GLU B 534 REMARK 465 GLU B 535 REMARK 465 GLY B 536 REMARK 465 GLY B 537 REMARK 465 GLY B 538 REMARK 465 GLY B 539 REMARK 465 GLY B 540 REMARK 465 GLY B 541 REMARK 465 GLY B 542 REMARK 465 GLY B 543 REMARK 465 GLY B 544 REMARK 465 GLY B 545 REMARK 465 GLY B 546 REMARK 465 LYS B 581 REMARK 465 ARG B 582 REMARK 465 ALA B 583 REMARK 465 GLU B 584 REMARK 465 GLN B 585 REMARK 465 LYS B 586 REMARK 465 ARG B 587 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS B 110 CG CD CE NZ REMARK 470 GLN B 457 CG CD OE1 NE2 REMARK 470 ASP B 547 CG OD1 OD2 REMARK 470 LYS B 580 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 4 -168.53 -105.66 REMARK 500 TYR A 48 75.72 -112.92 REMARK 500 ASN A 143 106.11 -58.02 REMARK 500 CYS A 216 80.03 -161.00 REMARK 500 LYS A 287 -64.56 -146.63 REMARK 500 ASP A 289 67.72 -158.37 REMARK 500 GLN B 144 47.71 -89.11 REMARK 500 SER B 238 -167.49 76.97 REMARK 500 GLN B 270 57.55 -96.71 REMARK 500 CYS B 294 29.85 -72.83 REMARK 500 SER B 299 -158.41 -154.68 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 401 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 158 OD1 REMARK 620 2 ASP A 158 OD2 36.8 REMARK 620 3 HOH A 506 O 112.5 148.6 REMARK 620 4 HOH A 509 O 99.9 91.0 89.4 REMARK 620 5 HOH A 515 O 169.3 140.4 70.9 90.2 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 601 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 430 OD1 REMARK 620 2 ASP B 430 OD2 65.1 REMARK 620 3 CYS B 432 SG 79.2 115.8 REMARK 620 4 HIS B 496 NE2 87.2 111.7 118.1 REMARK 620 5 HOH B 718 O 160.6 95.5 110.1 102.2 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 602 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B 715 O REMARK 620 2 HOH B 724 O 119.8 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA B 602 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4YDE RELATED DB: PDB DBREF 4YDO A 1 305 UNP Q9Y765 FNTA_CANAX 1 305 DBREF 4YDO B 1 587 UNP Q59LE1 Q59LE1_CANAL 1 587 SEQADV 4YDO MET A -23 UNP Q9Y765 INITIATING METHIONINE SEQADV 4YDO GLY A -22 UNP Q9Y765 EXPRESSION TAG SEQADV 4YDO SER A -21 UNP Q9Y765 EXPRESSION TAG SEQADV 4YDO SER A -20 UNP Q9Y765 EXPRESSION TAG SEQADV 4YDO HIS A -19 UNP Q9Y765 EXPRESSION TAG SEQADV 4YDO HIS A -18 UNP Q9Y765 EXPRESSION TAG SEQADV 4YDO HIS A -17 UNP Q9Y765 EXPRESSION TAG SEQADV 4YDO HIS A -16 UNP Q9Y765 EXPRESSION TAG SEQADV 4YDO HIS A -15 UNP Q9Y765 EXPRESSION TAG SEQADV 4YDO HIS A -14 UNP Q9Y765 EXPRESSION TAG SEQADV 4YDO SER A -13 UNP Q9Y765 EXPRESSION TAG SEQADV 4YDO GLN A -12 UNP Q9Y765 EXPRESSION TAG SEQADV 4YDO ASP A -11 UNP Q9Y765 EXPRESSION TAG SEQADV 4YDO PRO A -10 UNP Q9Y765 EXPRESSION TAG SEQADV 4YDO ASN A -9 UNP Q9Y765 EXPRESSION TAG SEQADV 4YDO SER A -8 UNP Q9Y765 EXPRESSION TAG SEQADV 4YDO SER A -7 UNP Q9Y765 EXPRESSION TAG SEQADV 4YDO SER A -6 UNP Q9Y765 EXPRESSION TAG SEQADV 4YDO ALA A -5 UNP Q9Y765 EXPRESSION TAG SEQADV 4YDO ARG A -4 UNP Q9Y765 EXPRESSION TAG SEQADV 4YDO LEU A -3 UNP Q9Y765 EXPRESSION TAG SEQADV 4YDO GLN A -2 UNP Q9Y765 EXPRESSION TAG SEQADV 4YDO VAL A -1 UNP Q9Y765 EXPRESSION TAG SEQADV 4YDO ASP A 0 UNP Q9Y765 EXPRESSION TAG SEQADV 4YDO ILE A 38 UNP Q9Y765 LEU 38 CONFLICT SEQADV 4YDO SER A 41 UNP Q9Y765 ALA 41 CONFLICT SEQRES 1 A 329 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER GLN ASP SEQRES 2 A 329 PRO ASN SER SER SER ALA ARG LEU GLN VAL ASP MET THR SEQRES 3 A 329 ASP SER LYS TYR ASP TYR SER ASP ILE THR PRO VAL ASP SEQRES 4 A 329 ILE ASN THR GLU GLU PRO GLN ILE CYS GLN ILE LEU TYR SEQRES 5 A 329 ASP GLU ASP TYR LYS GLN ILE MET GLY ILE LEU LEU SER SEQRES 6 A 329 LEU MET LYS ALA GLU GLU TYR SER GLU ARG ALA LEU HIS SEQRES 7 A 329 ILE THR GLU LEU GLY ILE ASN GLU LEU ALA SER HIS TYR SEQRES 8 A 329 THR ILE TRP ILE TYR ARG PHE ASN ILE LEU LYS ASN LEU SEQRES 9 A 329 PRO ASN ARG ASN LEU TYR ASP GLU LEU ASP TRP CYS GLU SEQRES 10 A 329 GLU ILE ALA LEU ASP ASN GLU LYS ASN TYR GLN ILE TRP SEQRES 11 A 329 ASN TYR ARG GLN LEU ILE ILE GLY GLN ILE MET GLU LEU SEQRES 12 A 329 ASN ASN ASN ASP PHE ASP PRO TYR ARG GLU PHE PRO ILE SEQRES 13 A 329 LEU GLU ALA MET LEU SER SER ASP PRO LYS ASN HIS HIS SEQRES 14 A 329 VAL TRP SER TYR ARG LYS TRP LEU VAL ASP THR PHE ASP SEQRES 15 A 329 LEU HIS ASN ASP ALA LYS GLU LEU SER PHE VAL ASP LYS SEQRES 16 A 329 VAL ILE ASP THR ASP LEU LYS ASN ASN SER ALA TRP SER SEQRES 17 A 329 HIS ARG PHE PHE LEU LEU PHE SER LYS LYS HIS LEU ALA SEQRES 18 A 329 THR ASP ASN THR ILE ASP GLU GLU LEU ASN TYR VAL LYS SEQRES 19 A 329 ASP LYS ILE VAL LYS CYS PRO GLN ASN PRO SER THR TRP SEQRES 20 A 329 ASN TYR LEU LEU GLY ILE HIS GLU ARG PHE ASP ARG SER SEQRES 21 A 329 ILE THR GLN LEU GLU GLU PHE SER LEU GLN PHE VAL ASP SEQRES 22 A 329 LEU GLU LYS ASP GLN VAL THR SER SER PHE ALA LEU GLU SEQRES 23 A 329 THR LEU ALA LYS ILE TYR THR GLN GLN LYS LYS TYR ASN SEQRES 24 A 329 GLU SER ARG THR VAL TYR ASP LEU LEU LYS SER LYS TYR SEQRES 25 A 329 ASP PRO ILE ARG SER ASN PHE TRP ASP TYR GLN ILE SER SEQRES 26 A 329 LYS LEU THR SER SEQRES 1 B 587 MET SER GLN ASP SER ASN ALA LYS ILE ASN TYR LEU LEU SEQRES 2 B 587 ASN ILE ILE ASN SER GLN ARG LYS PRO PRO ILE ILE ASN SEQRES 3 B 587 ASN PRO SER ILE SER SER ASN THR ASN ARG VAL ARG THR SEQRES 4 B 587 LYS THR LYS THR ARG THR ARG THR SER PRO ASN SER LYS SEQRES 5 B 587 THR LYS ILE LYS THR LYS THR MET ASN THR MET LYS THR SEQRES 6 B 587 ASN ASN ARG ASN SER ILE LEU THR GLU THR GLU GLU LEU SEQRES 7 B 587 PHE THR ASN GLU SER GLN ILE ILE GLU SER PHE ASN SER SEQRES 8 B 587 ASN CYS THR ILE VAL ASP SER ASN SER ASP PHE HIS ASP SEQRES 9 B 587 LYS LEU HIS VAL TYR LYS SER PRO ILE ILE ASP ILE THR SEQRES 10 B 587 LYS TYR PHE SER PRO THR VAL GLU SER GLN MET ASP LEU SEQRES 11 B 587 GLU LEU ILE ILE LEU ASN GLU TYR TYR LEU LYS THR HIS SEQRES 12 B 587 GLN HIS HIS GLN GLU GLN GLN ASN ASP GLU ASP GLU ASP SEQRES 13 B 587 GLU ASP GLU ASP ASP GLU LEU ASN TYR PHE TYR ILE ASP SEQRES 14 B 587 ALA HIS LEU LYS TYR ILE LEU SER SER LEU ILE ASP PRO SEQRES 15 B 587 MET PRO SER GLY TYR GLN VAL LEU ASP VAL ASN HIS SER SEQRES 16 B 587 TRP MET ILE TYR TRP LEU LEU ASN SER TYR TYR LEU ILE SEQRES 17 B 587 GLN ASN PRO THR MET GLU ILE ASN GLN SER ILE LEU ASP SEQRES 18 B 587 LEU ILE VAL ASN LYS ILE THR LYS CYS ILE ASN TYR GLY SEQRES 19 B 587 ASP SER LEU SER GLY VAL PRO PHE ASP GLY ILE GLY GLY SEQRES 20 B 587 GLY ASN ASN GLN LEU GLY HIS LEU ALA SER THR TYR ALA SEQRES 21 B 587 ALA ILE LEU THR LEU ILE LEU THR ASP GLN TYR GLU LEU SEQRES 22 B 587 LEU ASP ASN LEU ARG GLU LEU ILE ARG ASP TRP LEU LEU SEQRES 23 B 587 THR LEU LYS LYS ARG SER SER CYS GLY SER GLY ALA SER SEQRES 24 B 587 PHE ILE MET HIS GLU ASN GLY GLU MET ASP ALA ARG SER SEQRES 25 B 587 THR TYR CYS ALA LEU ILE ILE ILE ASN LEU LEU ASN LEU SEQRES 26 B 587 THR ASN TYR GLU GLU ASN SER SER SER PRO GLU GLU LEU SEQRES 27 B 587 ASP PRO LEU ILE ASP GLY VAL GLU ASN TRP LEU ASN SER SEQRES 28 B 587 CYS GLN THR TYR GLU GLY GLY PHE SER ASN ILE PRO ASN SEQRES 29 B 587 THR GLU ALA HIS GLY GLY TYR THR TYR CYS ALA LEU ALA SEQRES 30 B 587 SER TYR PHE LEU LEU TYR ASP ASN ARG LYS GLN PHE SER SEQRES 31 B 587 SER GLY SER THR SER SER LEU SER ASN SER VAL CYS TRP SEQRES 32 B 587 GLU LYS LEU LEU GLU TRP SER VAL HIS ARG GLN HIS GLU SEQRES 33 B 587 LEU GLU GLY GLY VAL ASP GLY ARG THR ASN LYS LEU VAL SEQRES 34 B 587 ASP ALA CYS TYR GLY PHE TRP ILE GLY GLY LEU SER PRO SEQRES 35 B 587 LEU LEU GLN LEU ILE ILE MET ASN SER SER GLN GLY GLN SEQRES 36 B 587 GLY GLN GLN GLN GLU VAL LYS VAL PHE ASP GLU GLU LYS SEQRES 37 B 587 LEU ARG GLN TYR LEU LEU ILE ILE ALA GLN ASP GLU SER SEQRES 38 B 587 GLY GLY PHE LYS ASP LYS PRO GLY LYS GLN VAL ASP TYR SEQRES 39 B 587 TYR HIS THR ASN TYR SER LEU SER GLY LEU SER ILE LEU SEQRES 40 B 587 GLU HIS SER TYR LYS PHE SER GLN ASP ASP GLU GLY ARG SEQRES 41 B 587 SER LEU ALA PHE GLN ILE ASP VAL GLU ARG GLU GLU GLU SEQRES 42 B 587 GLU GLU GLY GLY GLY GLY GLY GLY GLY GLY GLY GLY GLY SEQRES 43 B 587 ASP ASN PHE THR ASN PRO ILE HIS PRO VAL PHE GLY ILE SEQRES 44 B 587 PRO ILE LYS PHE VAL LYS LYS CYS HIS ASP TYR PHE LYS SEQRES 45 B 587 LEU LYS PRO ILE SER LYS PRO LYS LYS ARG ALA GLU GLN SEQRES 46 B 587 LYS ARG HET CA A 401 1 HET ZN B 601 1 HET CA B 602 1 HETNAM CA CALCIUM ION HETNAM ZN ZINC ION FORMUL 3 CA 2(CA 2+) FORMUL 4 ZN ZN 2+ FORMUL 6 HOH *44(H2 O) HELIX 1 AA1 ASP A 29 ALA A 45 1 17 HELIX 2 AA2 SER A 49 LEU A 63 1 15 HELIX 3 AA3 HIS A 66 LYS A 78 1 13 HELIX 4 AA4 ASN A 84 ASN A 99 1 16 HELIX 5 AA5 TYR A 103 ASN A 120 1 18 HELIX 6 AA6 ASP A 125 ARG A 128 5 4 HELIX 7 AA7 GLU A 129 ASP A 140 1 12 HELIX 8 AA8 ASN A 143 ASP A 158 1 16 HELIX 9 AA9 ASP A 162 ASP A 176 1 15 HELIX 10 AB1 ASN A 179 SER A 192 1 14 HELIX 11 AB2 LYS A 193 ALA A 197 5 5 HELIX 12 AB3 THR A 198 CYS A 216 1 19 HELIX 13 AB4 ASN A 219 PHE A 233 1 15 HELIX 14 AB5 SER A 236 GLN A 239 5 4 HELIX 15 AB6 LEU A 240 LEU A 245 1 6 HELIX 16 AB7 SER A 257 GLN A 271 1 15 HELIX 17 AB8 LYS A 273 LYS A 287 1 15 HELIX 18 AB9 ASP A 289 ILE A 291 5 3 HELIX 19 AC1 ARG A 292 LYS A 302 1 11 HELIX 20 AC2 SER B 121 HIS B 143 1 23 HELIX 21 AC3 TYR B 167 ASP B 181 1 15 HELIX 22 AC4 PRO B 184 ASP B 191 5 8 HELIX 23 AC5 ASN B 193 ILE B 208 1 16 HELIX 24 AC6 ASN B 216 ILE B 231 1 16 HELIX 25 AC7 HIS B 254 THR B 268 1 15 HELIX 26 AC8 GLN B 270 LEU B 288 1 19 HELIX 27 AC9 ASP B 309 LEU B 323 1 15 HELIX 28 AD1 GLY B 344 CYS B 352 1 9 HELIX 29 AD2 HIS B 368 TYR B 383 1 16 HELIX 30 AD3 ASN B 385 PHE B 389 5 5 HELIX 31 AD4 CYS B 402 HIS B 412 1 11 HELIX 32 AD5 CYS B 432 ILE B 437 1 6 HELIX 33 AD6 GLY B 439 ASN B 450 1 12 HELIX 34 AD7 ASP B 465 ILE B 476 1 12 HELIX 35 AD8 ASP B 493 HIS B 509 1 17 HELIX 36 AD9 SER B 521 PHE B 524 5 4 HELIX 37 AE1 PRO B 560 LYS B 572 1 13 SHEET 1 AA1 2 VAL A 248 ASP A 249 0 SHEET 2 AA1 2 GLN A 254 VAL A 255 -1 O GLN A 254 N ASP A 249 SHEET 1 AA2 2 LYS B 289 ARG B 291 0 SHEET 2 AA2 2 ALA B 298 PHE B 300 -1 O SER B 299 N LYS B 290 SHEET 1 AA3 2 TYR B 511 PHE B 513 0 SHEET 2 AA3 2 ILE B 526 VAL B 528 -1 O ASP B 527 N LYS B 512 LINK OD1 ASP A 158 CA CA A 401 1555 1555 2.38 LINK OD2 ASP A 158 CA CA A 401 1555 5557 2.84 LINK CA CA A 401 O HOH A 506 1555 1555 2.40 LINK CA CA A 401 O HOH A 509 1555 1555 2.39 LINK CA CA A 401 O HOH A 515 1555 5557 2.51 LINK OD1 ASP B 430 ZN ZN B 601 1555 1555 2.02 LINK OD2 ASP B 430 ZN ZN B 601 1555 1555 2.03 LINK SG CYS B 432 ZN ZN B 601 1555 1555 2.31 LINK NE2 HIS B 496 ZN ZN B 601 1555 1555 2.03 LINK ZN ZN B 601 O HOH B 718 1555 1555 2.55 LINK CA CA B 602 O HOH B 715 1555 1555 2.40 LINK CA CA B 602 O HOH B 724 1555 1555 2.40 CISPEP 1 GLU A 20 PRO A 21 0 1.13 SITE 1 AC1 4 ASP A 158 HOH A 506 HOH A 509 HOH A 515 SITE 1 AC2 4 ASP B 430 CYS B 432 HIS B 496 HOH B 718 SITE 1 AC3 3 CYS B 402 HOH B 715 HOH B 724 CRYST1 96.824 96.824 189.082 90.00 90.00 90.00 P 43 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010328 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010328 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005289 0.00000