data_4YE2 # _entry.id 4YE2 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4YE2 pdb_00004ye2 10.2210/pdb4ye2/pdb WWPDB D_1000207294 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB '4RPT is the same protein in the absence of ligand' 4RPT unspecified PDB . 4YFW unspecified PDB . 4YFZ unspecified PDB . 4YG0 unspecified PDB . 4YG3 unspecified PDB . 4YG6 unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 4YE2 _pdbx_database_status.recvd_initial_deposition_date 2015-02-23 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Hu, L.' 1 ? 'Sankaran, B.' 2 ? 'Prasad, B.V.V.' 3 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev J.Virol. _citation.journal_id_ASTM JOVIAM _citation.journal_id_CSD 0825 _citation.journal_id_ISSN 1098-5514 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 89 _citation.language ? _citation.page_first 6633 _citation.page_last 6645 _citation.title ;Structural basis for 2'-5'-oligoadenylate binding and enzyme activity of a viral RNase L antagonist. ; _citation.year 2015 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1128/JVI.00701-15 _citation.pdbx_database_id_PubMed 25878106 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Ogden, K.M.' 1 ? primary 'Hu, L.' 2 ? primary 'Jha, B.K.' 3 ? primary 'Sankaran, B.' 4 ? primary 'Weiss, S.R.' 5 ? primary 'Silverman, R.H.' 6 ? primary 'Patton, J.T.' 7 ? primary 'Prasad, B.V.' 8 ? # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 4YE2 _cell.details ? _cell.formula_units_Z ? _cell.length_a 97.137 _cell.length_a_esd ? _cell.length_b 97.137 _cell.length_b_esd ? _cell.length_c 110.729 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 16 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 4YE2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Capping enzyme protein' 16766.479 2 ? ? 'UNP residues 694-835' ? 2 non-polymer syn "ADENOSINE-2'-5'-DIPHOSPHATE" 427.201 1 ? ? ? ? 3 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ? 4 water nat water 18.015 3 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Capping protein VP3,VP3' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SGADDPNYFIGIKFRHIPYEYDVKIPHLTFGVLFISDNMIPDVVEIMKIMKKELFEMDITTSYTYMLSDGIYVANVSGVL ATYFKMYNLFYKSQITFGQSRMFIPHITLSFSNNKTVRIESTRLKISSIYLRKIKGDTVFDMSE ; _entity_poly.pdbx_seq_one_letter_code_can ;SGADDPNYFIGIKFRHIPYEYDVKIPHLTFGVLFISDNMIPDVVEIMKIMKKELFEMDITTSYTYMLSDGIYVANVSGVL ATYFKMYNLFYKSQITFGQSRMFIPHITLSFSNNKTVRIESTRLKISSIYLRKIKGDTVFDMSE ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 GLY n 1 3 ALA n 1 4 ASP n 1 5 ASP n 1 6 PRO n 1 7 ASN n 1 8 TYR n 1 9 PHE n 1 10 ILE n 1 11 GLY n 1 12 ILE n 1 13 LYS n 1 14 PHE n 1 15 ARG n 1 16 HIS n 1 17 ILE n 1 18 PRO n 1 19 TYR n 1 20 GLU n 1 21 TYR n 1 22 ASP n 1 23 VAL n 1 24 LYS n 1 25 ILE n 1 26 PRO n 1 27 HIS n 1 28 LEU n 1 29 THR n 1 30 PHE n 1 31 GLY n 1 32 VAL n 1 33 LEU n 1 34 PHE n 1 35 ILE n 1 36 SER n 1 37 ASP n 1 38 ASN n 1 39 MET n 1 40 ILE n 1 41 PRO n 1 42 ASP n 1 43 VAL n 1 44 VAL n 1 45 GLU n 1 46 ILE n 1 47 MET n 1 48 LYS n 1 49 ILE n 1 50 MET n 1 51 LYS n 1 52 LYS n 1 53 GLU n 1 54 LEU n 1 55 PHE n 1 56 GLU n 1 57 MET n 1 58 ASP n 1 59 ILE n 1 60 THR n 1 61 THR n 1 62 SER n 1 63 TYR n 1 64 THR n 1 65 TYR n 1 66 MET n 1 67 LEU n 1 68 SER n 1 69 ASP n 1 70 GLY n 1 71 ILE n 1 72 TYR n 1 73 VAL n 1 74 ALA n 1 75 ASN n 1 76 VAL n 1 77 SER n 1 78 GLY n 1 79 VAL n 1 80 LEU n 1 81 ALA n 1 82 THR n 1 83 TYR n 1 84 PHE n 1 85 LYS n 1 86 MET n 1 87 TYR n 1 88 ASN n 1 89 LEU n 1 90 PHE n 1 91 TYR n 1 92 LYS n 1 93 SER n 1 94 GLN n 1 95 ILE n 1 96 THR n 1 97 PHE n 1 98 GLY n 1 99 GLN n 1 100 SER n 1 101 ARG n 1 102 MET n 1 103 PHE n 1 104 ILE n 1 105 PRO n 1 106 HIS n 1 107 ILE n 1 108 THR n 1 109 LEU n 1 110 SER n 1 111 PHE n 1 112 SER n 1 113 ASN n 1 114 ASN n 1 115 LYS n 1 116 THR n 1 117 VAL n 1 118 ARG n 1 119 ILE n 1 120 GLU n 1 121 SER n 1 122 THR n 1 123 ARG n 1 124 LEU n 1 125 LYS n 1 126 ILE n 1 127 SER n 1 128 SER n 1 129 ILE n 1 130 TYR n 1 131 LEU n 1 132 ARG n 1 133 LYS n 1 134 ILE n 1 135 LYS n 1 136 GLY n 1 137 ASP n 1 138 THR n 1 139 VAL n 1 140 PHE n 1 141 ASP n 1 142 MET n 1 143 SER n 1 144 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 144 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain RRV _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Rotavirus A' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 28875 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)pLysS' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code B3F2X4_9REOV _struct_ref.pdbx_db_accession B3F2X4 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;ADDPNYFIGIKFRHIPYEYDVKIPHLTFGVLFISDNMIPDVVEIMKIMKKELFEMDITTSYTYMLSDGIYVANVSGVLAT YFKMYNLFYKSQITFGQSRMFIPHITLSFSNNKTVRIESTRLKISSIYLRKIKGDTVFDMSE ; _struct_ref.pdbx_align_begin 694 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4YE2 A 3 ? 144 ? B3F2X4 694 ? 835 ? 694 835 2 1 4YE2 B 3 ? 144 ? B3F2X4 694 ? 835 ? 694 835 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4YE2 SER A 1 ? UNP B3F2X4 ? ? 'expression tag' 692 1 1 4YE2 GLY A 2 ? UNP B3F2X4 ? ? 'expression tag' 693 2 2 4YE2 SER B 1 ? UNP B3F2X4 ? ? 'expression tag' 692 3 2 4YE2 GLY B 2 ? UNP B3F2X4 ? ? 'expression tag' 693 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A2P non-polymer . "ADENOSINE-2'-5'-DIPHOSPHATE" ? 'C10 H15 N5 O10 P2' 427.201 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 4YE2 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 3.89 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 68.42 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.1M HEPES sodium, 2% PEG400, 2.0M Ammonium sulfate' _exptl_crystal_grow.pdbx_pH_range 7.5 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2014-11-11 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator 'Asymmetric curved crystal' _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.976484 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'ALS BEAMLINE 5.0.1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.976484 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 5.0.1 _diffrn_source.pdbx_synchrotron_site ALS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 4YE2 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 3.098 _reflns.d_resolution_low 35.0 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all 10134 _reflns.number_obs 10030 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.9 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 18.4 _reflns.pdbx_Rmerge_I_obs 0.146 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 23.6 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 3.1 _reflns_shell.d_res_low 3.15 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 4.4 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all 100 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.8 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 18.4 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 4YE2 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 3.098 _refine.ls_d_res_low 34.503 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 9763 _refine.ls_number_reflns_R_free 472 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 96.45 _refine.ls_percent_reflns_R_free 4.83 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2611 _refine.ls_R_factor_R_free 0.2724 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2605 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.35 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 4RPT _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 25.49 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.46 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2331 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 32 _refine_hist.number_atoms_solvent 4 _refine_hist.number_atoms_total 2367 _refine_hist.d_res_high 3.098 _refine_hist.d_res_low 34.503 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.004 ? 2420 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.141 ? 3270 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 16.688 ? 894 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.044 ? 365 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.011 ? 396 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 3.0978 3.5457 . . 160 3043 98.00 . . . 0.3346 . 0.2935 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.5457 4.4657 . . 149 2908 92.00 . . . 0.2990 . 0.3000 . . . . . . . . . . 'X-RAY DIFFRACTION' 4.4657 34.5050 . . 163 3340 100.00 . . . 0.2159 . 0.2128 . . . . . . . . . . # _struct.entry_id 4YE2 _struct.title ;The 1.35 structure of a viral RNase L antagonist reveals basis for the 2'-5'-oligoadenylate binding and enzyme activity. ; _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 4YE2 _struct_keywords.text 'innate immunity, RNase L, oligoadenylate, rotavirus, coronavirus, phosphodiesterase, VIRAL PROTEIN' _struct_keywords.pdbx_keywords 'VIRAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 36 ? ASN A 38 ? SER A 727 ASN A 729 5 ? 3 HELX_P HELX_P2 AA2 MET A 39 ? MET A 50 ? MET A 730 MET A 741 1 ? 12 HELX_P HELX_P3 AA3 MET A 50 ? MET A 57 ? MET A 741 MET A 748 1 ? 8 HELX_P HELX_P4 AA4 VAL A 79 ? SER A 93 ? VAL A 770 SER A 784 1 ? 15 HELX_P HELX_P5 AA5 SER B 36 ? ASN B 38 ? SER B 727 ASN B 729 5 ? 3 HELX_P HELX_P6 AA6 MET B 39 ? MET B 57 ? MET B 730 MET B 748 1 ? 19 HELX_P HELX_P7 AA7 VAL B 79 ? SER B 93 ? VAL B 770 SER B 784 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 5 ? AA2 ? 4 ? AA3 ? 4 ? AA4 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel AA4 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 THR A 96 ? PHE A 97 ? THR A 787 PHE A 788 AA1 2 LEU A 28 ? PHE A 34 ? LEU A 719 PHE A 725 AA1 3 TYR A 8 ? PHE A 14 ? TYR A 699 PHE A 705 AA1 4 ILE A 126 ? LYS A 133 ? ILE A 817 LYS A 824 AA1 5 THR A 138 ? MET A 142 ? THR A 829 MET A 833 AA2 1 HIS A 106 ? SER A 110 ? HIS A 797 SER A 801 AA2 2 ILE A 71 ? ASN A 75 ? ILE A 762 ASN A 766 AA2 3 ILE A 59 ? SER A 68 ? ILE A 750 SER A 759 AA2 4 ARG A 118 ? LEU A 124 ? ARG A 809 LEU A 815 AA3 1 LEU B 28 ? LEU B 33 ? LEU B 719 LEU B 724 AA3 2 TYR B 8 ? PHE B 14 ? TYR B 699 PHE B 705 AA3 3 ILE B 126 ? LYS B 133 ? ILE B 817 LYS B 824 AA3 4 THR B 138 ? MET B 142 ? THR B 829 MET B 833 AA4 1 HIS B 106 ? SER B 110 ? HIS B 797 SER B 801 AA4 2 ILE B 71 ? ASN B 75 ? ILE B 762 ASN B 766 AA4 3 THR B 60 ? SER B 68 ? THR B 751 SER B 759 AA4 4 ARG B 118 ? ARG B 123 ? ARG B 809 ARG B 814 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O THR A 96 ? O THR A 787 N PHE A 34 ? N PHE A 725 AA1 2 3 O LEU A 28 ? O LEU A 719 N ILE A 12 ? N ILE A 703 AA1 3 4 N LYS A 13 ? N LYS A 704 O SER A 127 ? O SER A 818 AA1 4 5 N LEU A 131 ? N LEU A 822 O PHE A 140 ? O PHE A 831 AA2 1 2 O LEU A 109 ? O LEU A 800 N TYR A 72 ? N TYR A 763 AA2 2 3 O VAL A 73 ? O VAL A 764 N TYR A 65 ? N TYR A 756 AA2 3 4 N THR A 61 ? N THR A 752 O THR A 122 ? O THR A 813 AA3 1 2 O PHE B 30 ? O PHE B 721 N ILE B 10 ? N ILE B 701 AA3 2 3 N LYS B 13 ? N LYS B 704 O SER B 127 ? O SER B 818 AA3 3 4 N LEU B 131 ? N LEU B 822 O PHE B 140 ? O PHE B 831 AA4 1 2 O LEU B 109 ? O LEU B 800 N TYR B 72 ? N TYR B 763 AA4 2 3 O VAL B 73 ? O VAL B 764 N TYR B 65 ? N TYR B 756 AA4 3 4 N SER B 62 ? N SER B 753 O ILE B 119 ? O ILE B 810 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A A2P 901 ? 9 'binding site for residue A2P A 901' AC2 Software B SO4 901 ? 3 'binding site for residue SO4 B 901' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 9 HIS A 27 ? HIS A 718 . ? 1_555 ? 2 AC1 9 THR A 29 ? THR A 720 . ? 1_555 ? 3 AC1 9 LEU A 67 ? LEU A 758 . ? 1_555 ? 4 AC1 9 ILE A 71 ? ILE A 762 . ? 1_555 ? 5 AC1 9 ARG A 101 ? ARG A 792 . ? 1_555 ? 6 AC1 9 MET A 102 ? MET A 793 . ? 1_555 ? 7 AC1 9 ILE A 104 ? ILE A 795 . ? 1_555 ? 8 AC1 9 HIS A 106 ? HIS A 797 . ? 1_555 ? 9 AC1 9 THR A 108 ? THR A 799 . ? 1_555 ? 10 AC2 3 HIS B 16 ? HIS B 707 . ? 1_555 ? 11 AC2 3 ILE B 17 ? ILE B 708 . ? 1_555 ? 12 AC2 3 TYR B 21 ? TYR B 712 . ? 1_555 ? # _atom_sites.entry_id 4YE2 _atom_sites.fract_transf_matrix[1][1] 0.010295 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010295 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009031 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 692 ? ? ? A . n A 1 2 GLY 2 693 ? ? ? A . n A 1 3 ALA 3 694 694 ALA ALA A . n A 1 4 ASP 4 695 695 ASP ASP A . n A 1 5 ASP 5 696 696 ASP ASP A . n A 1 6 PRO 6 697 697 PRO PRO A . n A 1 7 ASN 7 698 698 ASN ASN A . n A 1 8 TYR 8 699 699 TYR TYR A . n A 1 9 PHE 9 700 700 PHE PHE A . n A 1 10 ILE 10 701 701 ILE ILE A . n A 1 11 GLY 11 702 702 GLY GLY A . n A 1 12 ILE 12 703 703 ILE ILE A . n A 1 13 LYS 13 704 704 LYS LYS A . n A 1 14 PHE 14 705 705 PHE PHE A . n A 1 15 ARG 15 706 706 ARG ARG A . n A 1 16 HIS 16 707 707 HIS HIS A . n A 1 17 ILE 17 708 708 ILE ILE A . n A 1 18 PRO 18 709 709 PRO PRO A . n A 1 19 TYR 19 710 710 TYR TYR A . n A 1 20 GLU 20 711 711 GLU GLU A . n A 1 21 TYR 21 712 712 TYR TYR A . n A 1 22 ASP 22 713 713 ASP ASP A . n A 1 23 VAL 23 714 714 VAL VAL A . n A 1 24 LYS 24 715 715 LYS LYS A . n A 1 25 ILE 25 716 716 ILE ILE A . n A 1 26 PRO 26 717 717 PRO PRO A . n A 1 27 HIS 27 718 718 HIS HIS A . n A 1 28 LEU 28 719 719 LEU LEU A . n A 1 29 THR 29 720 720 THR THR A . n A 1 30 PHE 30 721 721 PHE PHE A . n A 1 31 GLY 31 722 722 GLY GLY A . n A 1 32 VAL 32 723 723 VAL VAL A . n A 1 33 LEU 33 724 724 LEU LEU A . n A 1 34 PHE 34 725 725 PHE PHE A . n A 1 35 ILE 35 726 726 ILE ILE A . n A 1 36 SER 36 727 727 SER SER A . n A 1 37 ASP 37 728 728 ASP ASP A . n A 1 38 ASN 38 729 729 ASN ASN A . n A 1 39 MET 39 730 730 MET MET A . n A 1 40 ILE 40 731 731 ILE ILE A . n A 1 41 PRO 41 732 732 PRO PRO A . n A 1 42 ASP 42 733 733 ASP ASP A . n A 1 43 VAL 43 734 734 VAL VAL A . n A 1 44 VAL 44 735 735 VAL VAL A . n A 1 45 GLU 45 736 736 GLU GLU A . n A 1 46 ILE 46 737 737 ILE ILE A . n A 1 47 MET 47 738 738 MET MET A . n A 1 48 LYS 48 739 739 LYS LYS A . n A 1 49 ILE 49 740 740 ILE ILE A . n A 1 50 MET 50 741 741 MET MET A . n A 1 51 LYS 51 742 742 LYS LYS A . n A 1 52 LYS 52 743 743 LYS LYS A . n A 1 53 GLU 53 744 744 GLU GLU A . n A 1 54 LEU 54 745 745 LEU LEU A . n A 1 55 PHE 55 746 746 PHE PHE A . n A 1 56 GLU 56 747 747 GLU GLU A . n A 1 57 MET 57 748 748 MET MET A . n A 1 58 ASP 58 749 749 ASP ASP A . n A 1 59 ILE 59 750 750 ILE ILE A . n A 1 60 THR 60 751 751 THR THR A . n A 1 61 THR 61 752 752 THR THR A . n A 1 62 SER 62 753 753 SER SER A . n A 1 63 TYR 63 754 754 TYR TYR A . n A 1 64 THR 64 755 755 THR THR A . n A 1 65 TYR 65 756 756 TYR TYR A . n A 1 66 MET 66 757 757 MET MET A . n A 1 67 LEU 67 758 758 LEU LEU A . n A 1 68 SER 68 759 759 SER SER A . n A 1 69 ASP 69 760 760 ASP ASP A . n A 1 70 GLY 70 761 761 GLY GLY A . n A 1 71 ILE 71 762 762 ILE ILE A . n A 1 72 TYR 72 763 763 TYR TYR A . n A 1 73 VAL 73 764 764 VAL VAL A . n A 1 74 ALA 74 765 765 ALA ALA A . n A 1 75 ASN 75 766 766 ASN ASN A . n A 1 76 VAL 76 767 767 VAL VAL A . n A 1 77 SER 77 768 768 SER SER A . n A 1 78 GLY 78 769 769 GLY GLY A . n A 1 79 VAL 79 770 770 VAL VAL A . n A 1 80 LEU 80 771 771 LEU LEU A . n A 1 81 ALA 81 772 772 ALA ALA A . n A 1 82 THR 82 773 773 THR THR A . n A 1 83 TYR 83 774 774 TYR TYR A . n A 1 84 PHE 84 775 775 PHE PHE A . n A 1 85 LYS 85 776 776 LYS LYS A . n A 1 86 MET 86 777 777 MET MET A . n A 1 87 TYR 87 778 778 TYR TYR A . n A 1 88 ASN 88 779 779 ASN ASN A . n A 1 89 LEU 89 780 780 LEU LEU A . n A 1 90 PHE 90 781 781 PHE PHE A . n A 1 91 TYR 91 782 782 TYR TYR A . n A 1 92 LYS 92 783 783 LYS LYS A . n A 1 93 SER 93 784 784 SER SER A . n A 1 94 GLN 94 785 785 GLN GLN A . n A 1 95 ILE 95 786 786 ILE ILE A . n A 1 96 THR 96 787 787 THR THR A . n A 1 97 PHE 97 788 788 PHE PHE A . n A 1 98 GLY 98 789 789 GLY GLY A . n A 1 99 GLN 99 790 790 GLN GLN A . n A 1 100 SER 100 791 791 SER SER A . n A 1 101 ARG 101 792 792 ARG ARG A . n A 1 102 MET 102 793 793 MET MET A . n A 1 103 PHE 103 794 794 PHE PHE A . n A 1 104 ILE 104 795 795 ILE ILE A . n A 1 105 PRO 105 796 796 PRO PRO A . n A 1 106 HIS 106 797 797 HIS HIS A . n A 1 107 ILE 107 798 798 ILE ILE A . n A 1 108 THR 108 799 799 THR THR A . n A 1 109 LEU 109 800 800 LEU LEU A . n A 1 110 SER 110 801 801 SER SER A . n A 1 111 PHE 111 802 802 PHE PHE A . n A 1 112 SER 112 803 803 SER SER A . n A 1 113 ASN 113 804 804 ASN ASN A . n A 1 114 ASN 114 805 805 ASN ASN A . n A 1 115 LYS 115 806 806 LYS LYS A . n A 1 116 THR 116 807 807 THR THR A . n A 1 117 VAL 117 808 808 VAL VAL A . n A 1 118 ARG 118 809 809 ARG ARG A . n A 1 119 ILE 119 810 810 ILE ILE A . n A 1 120 GLU 120 811 811 GLU GLU A . n A 1 121 SER 121 812 812 SER SER A . n A 1 122 THR 122 813 813 THR THR A . n A 1 123 ARG 123 814 814 ARG ARG A . n A 1 124 LEU 124 815 815 LEU LEU A . n A 1 125 LYS 125 816 816 LYS LYS A . n A 1 126 ILE 126 817 817 ILE ILE A . n A 1 127 SER 127 818 818 SER SER A . n A 1 128 SER 128 819 819 SER SER A . n A 1 129 ILE 129 820 820 ILE ILE A . n A 1 130 TYR 130 821 821 TYR TYR A . n A 1 131 LEU 131 822 822 LEU LEU A . n A 1 132 ARG 132 823 823 ARG ARG A . n A 1 133 LYS 133 824 824 LYS LYS A . n A 1 134 ILE 134 825 825 ILE ILE A . n A 1 135 LYS 135 826 826 LYS LYS A . n A 1 136 GLY 136 827 827 GLY GLY A . n A 1 137 ASP 137 828 828 ASP ASP A . n A 1 138 THR 138 829 829 THR THR A . n A 1 139 VAL 139 830 830 VAL VAL A . n A 1 140 PHE 140 831 831 PHE PHE A . n A 1 141 ASP 141 832 832 ASP ASP A . n A 1 142 MET 142 833 833 MET MET A . n A 1 143 SER 143 834 834 SER SER A . n A 1 144 GLU 144 835 835 GLU GLU A . n B 1 1 SER 1 692 ? ? ? B . n B 1 2 GLY 2 693 ? ? ? B . n B 1 3 ALA 3 694 ? ? ? B . n B 1 4 ASP 4 695 695 ASP ASP B . n B 1 5 ASP 5 696 696 ASP ASP B . n B 1 6 PRO 6 697 697 PRO PRO B . n B 1 7 ASN 7 698 698 ASN ASN B . n B 1 8 TYR 8 699 699 TYR TYR B . n B 1 9 PHE 9 700 700 PHE PHE B . n B 1 10 ILE 10 701 701 ILE ILE B . n B 1 11 GLY 11 702 702 GLY GLY B . n B 1 12 ILE 12 703 703 ILE ILE B . n B 1 13 LYS 13 704 704 LYS LYS B . n B 1 14 PHE 14 705 705 PHE PHE B . n B 1 15 ARG 15 706 706 ARG ARG B . n B 1 16 HIS 16 707 707 HIS HIS B . n B 1 17 ILE 17 708 708 ILE ILE B . n B 1 18 PRO 18 709 709 PRO PRO B . n B 1 19 TYR 19 710 710 TYR TYR B . n B 1 20 GLU 20 711 711 GLU GLU B . n B 1 21 TYR 21 712 712 TYR TYR B . n B 1 22 ASP 22 713 713 ASP ASP B . n B 1 23 VAL 23 714 714 VAL VAL B . n B 1 24 LYS 24 715 715 LYS LYS B . n B 1 25 ILE 25 716 716 ILE ILE B . n B 1 26 PRO 26 717 717 PRO PRO B . n B 1 27 HIS 27 718 718 HIS HIS B . n B 1 28 LEU 28 719 719 LEU LEU B . n B 1 29 THR 29 720 720 THR THR B . n B 1 30 PHE 30 721 721 PHE PHE B . n B 1 31 GLY 31 722 722 GLY GLY B . n B 1 32 VAL 32 723 723 VAL VAL B . n B 1 33 LEU 33 724 724 LEU LEU B . n B 1 34 PHE 34 725 725 PHE PHE B . n B 1 35 ILE 35 726 726 ILE ILE B . n B 1 36 SER 36 727 727 SER SER B . n B 1 37 ASP 37 728 728 ASP ASP B . n B 1 38 ASN 38 729 729 ASN ASN B . n B 1 39 MET 39 730 730 MET MET B . n B 1 40 ILE 40 731 731 ILE ILE B . n B 1 41 PRO 41 732 732 PRO PRO B . n B 1 42 ASP 42 733 733 ASP ASP B . n B 1 43 VAL 43 734 734 VAL VAL B . n B 1 44 VAL 44 735 735 VAL VAL B . n B 1 45 GLU 45 736 736 GLU GLU B . n B 1 46 ILE 46 737 737 ILE ILE B . n B 1 47 MET 47 738 738 MET MET B . n B 1 48 LYS 48 739 739 LYS LYS B . n B 1 49 ILE 49 740 740 ILE ILE B . n B 1 50 MET 50 741 741 MET MET B . n B 1 51 LYS 51 742 742 LYS LYS B . n B 1 52 LYS 52 743 743 LYS LYS B . n B 1 53 GLU 53 744 744 GLU GLU B . n B 1 54 LEU 54 745 745 LEU LEU B . n B 1 55 PHE 55 746 746 PHE PHE B . n B 1 56 GLU 56 747 747 GLU GLU B . n B 1 57 MET 57 748 748 MET MET B . n B 1 58 ASP 58 749 749 ASP ASP B . n B 1 59 ILE 59 750 750 ILE ILE B . n B 1 60 THR 60 751 751 THR THR B . n B 1 61 THR 61 752 752 THR THR B . n B 1 62 SER 62 753 753 SER SER B . n B 1 63 TYR 63 754 754 TYR TYR B . n B 1 64 THR 64 755 755 THR THR B . n B 1 65 TYR 65 756 756 TYR TYR B . n B 1 66 MET 66 757 757 MET MET B . n B 1 67 LEU 67 758 758 LEU LEU B . n B 1 68 SER 68 759 759 SER SER B . n B 1 69 ASP 69 760 760 ASP ASP B . n B 1 70 GLY 70 761 761 GLY GLY B . n B 1 71 ILE 71 762 762 ILE ILE B . n B 1 72 TYR 72 763 763 TYR TYR B . n B 1 73 VAL 73 764 764 VAL VAL B . n B 1 74 ALA 74 765 765 ALA ALA B . n B 1 75 ASN 75 766 766 ASN ASN B . n B 1 76 VAL 76 767 767 VAL VAL B . n B 1 77 SER 77 768 768 SER SER B . n B 1 78 GLY 78 769 769 GLY GLY B . n B 1 79 VAL 79 770 770 VAL VAL B . n B 1 80 LEU 80 771 771 LEU LEU B . n B 1 81 ALA 81 772 772 ALA ALA B . n B 1 82 THR 82 773 773 THR THR B . n B 1 83 TYR 83 774 774 TYR TYR B . n B 1 84 PHE 84 775 775 PHE PHE B . n B 1 85 LYS 85 776 776 LYS LYS B . n B 1 86 MET 86 777 777 MET MET B . n B 1 87 TYR 87 778 778 TYR TYR B . n B 1 88 ASN 88 779 779 ASN ASN B . n B 1 89 LEU 89 780 780 LEU LEU B . n B 1 90 PHE 90 781 781 PHE PHE B . n B 1 91 TYR 91 782 782 TYR TYR B . n B 1 92 LYS 92 783 783 LYS LYS B . n B 1 93 SER 93 784 784 SER SER B . n B 1 94 GLN 94 785 785 GLN GLN B . n B 1 95 ILE 95 786 786 ILE ILE B . n B 1 96 THR 96 787 787 THR THR B . n B 1 97 PHE 97 788 788 PHE PHE B . n B 1 98 GLY 98 789 789 GLY GLY B . n B 1 99 GLN 99 790 790 GLN GLN B . n B 1 100 SER 100 791 791 SER SER B . n B 1 101 ARG 101 792 792 ARG ARG B . n B 1 102 MET 102 793 793 MET MET B . n B 1 103 PHE 103 794 794 PHE PHE B . n B 1 104 ILE 104 795 795 ILE ILE B . n B 1 105 PRO 105 796 796 PRO PRO B . n B 1 106 HIS 106 797 797 HIS HIS B . n B 1 107 ILE 107 798 798 ILE ILE B . n B 1 108 THR 108 799 799 THR THR B . n B 1 109 LEU 109 800 800 LEU LEU B . n B 1 110 SER 110 801 801 SER SER B . n B 1 111 PHE 111 802 802 PHE PHE B . n B 1 112 SER 112 803 803 SER SER B . n B 1 113 ASN 113 804 804 ASN ASN B . n B 1 114 ASN 114 805 805 ASN ASN B . n B 1 115 LYS 115 806 806 LYS LYS B . n B 1 116 THR 116 807 807 THR THR B . n B 1 117 VAL 117 808 808 VAL VAL B . n B 1 118 ARG 118 809 809 ARG ARG B . n B 1 119 ILE 119 810 810 ILE ILE B . n B 1 120 GLU 120 811 811 GLU GLU B . n B 1 121 SER 121 812 812 SER SER B . n B 1 122 THR 122 813 813 THR THR B . n B 1 123 ARG 123 814 814 ARG ARG B . n B 1 124 LEU 124 815 815 LEU LEU B . n B 1 125 LYS 125 816 816 LYS LYS B . n B 1 126 ILE 126 817 817 ILE ILE B . n B 1 127 SER 127 818 818 SER SER B . n B 1 128 SER 128 819 819 SER SER B . n B 1 129 ILE 129 820 820 ILE ILE B . n B 1 130 TYR 130 821 821 TYR TYR B . n B 1 131 LEU 131 822 822 LEU LEU B . n B 1 132 ARG 132 823 823 ARG ARG B . n B 1 133 LYS 133 824 824 LYS LYS B . n B 1 134 ILE 134 825 825 ILE ILE B . n B 1 135 LYS 135 826 826 LYS LYS B . n B 1 136 GLY 136 827 827 GLY GLY B . n B 1 137 ASP 137 828 828 ASP ASP B . n B 1 138 THR 138 829 829 THR THR B . n B 1 139 VAL 139 830 830 VAL VAL B . n B 1 140 PHE 140 831 831 PHE PHE B . n B 1 141 ASP 141 832 832 ASP ASP B . n B 1 142 MET 142 833 833 MET MET B . n B 1 143 SER 143 834 834 SER SER B . n B 1 144 GLU 144 835 835 GLU GLU B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 A2P 1 901 1 A2P A2P A . D 3 SO4 1 901 2 SO4 SO4 B . E 4 HOH 1 1001 5 HOH HOH B . E 4 HOH 2 1002 3 HOH HOH B . E 4 HOH 3 1003 6 HOH HOH B . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 author_defined_assembly ? monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C 2 1 B,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-04-29 2 'Structure model' 1 1 2015-08-12 3 'Structure model' 1 2 2017-09-13 4 'Structure model' 1 3 2019-12-11 5 'Structure model' 1 4 2021-06-30 6 'Structure model' 1 5 2023-09-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Author supporting evidence' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 4 'Structure model' 'Author supporting evidence' 6 5 'Structure model' 'Structure summary' 7 6 'Structure model' 'Data collection' 8 6 'Structure model' 'Database references' 9 6 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' citation 2 3 'Structure model' pdbx_audit_support 3 3 'Structure model' pdbx_struct_oper_list 4 4 'Structure model' pdbx_audit_support 5 5 'Structure model' audit_author 6 6 'Structure model' chem_comp_atom 7 6 'Structure model' chem_comp_bond 8 6 'Structure model' database_2 9 6 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_citation.journal_id_CSD' 2 3 'Structure model' '_pdbx_audit_support.funding_organization' 3 3 'Structure model' '_pdbx_struct_oper_list.symmetry_operation' 4 4 'Structure model' '_pdbx_audit_support.funding_organization' 5 6 'Structure model' '_database_2.pdbx_DOI' 6 6 'Structure model' '_database_2.pdbx_database_accession' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(phenix.refine: dev_1839)' 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 2 ? 'model building' ? ? ? ? ? ? ? ? ? ? ? Coot ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 5 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 709 ? ? -85.30 43.42 2 1 PRO B 709 ? ? -85.17 36.73 3 1 PHE B 721 ? ? -143.49 38.00 4 1 PHE B 802 ? ? -104.81 41.11 # _pdbx_validate_peptide_omega.id 1 _pdbx_validate_peptide_omega.PDB_model_num 1 _pdbx_validate_peptide_omega.auth_comp_id_1 GLY _pdbx_validate_peptide_omega.auth_asym_id_1 B _pdbx_validate_peptide_omega.auth_seq_id_1 789 _pdbx_validate_peptide_omega.PDB_ins_code_1 ? _pdbx_validate_peptide_omega.label_alt_id_1 ? _pdbx_validate_peptide_omega.auth_comp_id_2 GLN _pdbx_validate_peptide_omega.auth_asym_id_2 B _pdbx_validate_peptide_omega.auth_seq_id_2 790 _pdbx_validate_peptide_omega.PDB_ins_code_2 ? _pdbx_validate_peptide_omega.label_alt_id_2 ? _pdbx_validate_peptide_omega.omega -146.91 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 692 ? A SER 1 2 1 Y 1 A GLY 693 ? A GLY 2 3 1 Y 1 B SER 692 ? B SER 1 4 1 Y 1 B GLY 693 ? B GLY 2 5 1 Y 1 B ALA 694 ? B ALA 3 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A2P P1 P N N 1 A2P O1P O N N 2 A2P O2P O N N 3 A2P O3P O N N 4 A2P P2 P N N 5 A2P O4P O N N 6 A2P O5P O N N 7 A2P O6P O N N 8 A2P "O5'" O N N 9 A2P "C5'" C N N 10 A2P "C4'" C N R 11 A2P "O4'" O N N 12 A2P "C3'" C N R 13 A2P "O3'" O N N 14 A2P "C2'" C N R 15 A2P "O2'" O N N 16 A2P "C1'" C N R 17 A2P N9 N Y N 18 A2P C8 C Y N 19 A2P N7 N Y N 20 A2P C5 C Y N 21 A2P C6 C Y N 22 A2P N6 N N N 23 A2P N1 N Y N 24 A2P C2 C Y N 25 A2P N3 N Y N 26 A2P C4 C Y N 27 A2P HOP2 H N N 28 A2P HOP3 H N N 29 A2P HOP5 H N N 30 A2P HOP6 H N N 31 A2P "H5'1" H N N 32 A2P "H5'2" H N N 33 A2P "H4'" H N N 34 A2P "H3'" H N N 35 A2P "HO3'" H N N 36 A2P "H2'" H N N 37 A2P "H1'" H N N 38 A2P H8 H N N 39 A2P HN61 H N N 40 A2P HN62 H N N 41 A2P H2 H N N 42 ALA N N N N 43 ALA CA C N S 44 ALA C C N N 45 ALA O O N N 46 ALA CB C N N 47 ALA OXT O N N 48 ALA H H N N 49 ALA H2 H N N 50 ALA HA H N N 51 ALA HB1 H N N 52 ALA HB2 H N N 53 ALA HB3 H N N 54 ALA HXT H N N 55 ARG N N N N 56 ARG CA C N S 57 ARG C C N N 58 ARG O O N N 59 ARG CB C N N 60 ARG CG C N N 61 ARG CD C N N 62 ARG NE N N N 63 ARG CZ C N N 64 ARG NH1 N N N 65 ARG NH2 N N N 66 ARG OXT O N N 67 ARG H H N N 68 ARG H2 H N N 69 ARG HA H N N 70 ARG HB2 H N N 71 ARG HB3 H N N 72 ARG HG2 H N N 73 ARG HG3 H N N 74 ARG HD2 H N N 75 ARG HD3 H N N 76 ARG HE H N N 77 ARG HH11 H N N 78 ARG HH12 H N N 79 ARG HH21 H N N 80 ARG HH22 H N N 81 ARG HXT H N N 82 ASN N N N N 83 ASN CA C N S 84 ASN C C N N 85 ASN O O N N 86 ASN CB C N N 87 ASN CG C N N 88 ASN OD1 O N N 89 ASN ND2 N N N 90 ASN OXT O N N 91 ASN H H N N 92 ASN H2 H N N 93 ASN HA H N N 94 ASN HB2 H N N 95 ASN HB3 H N N 96 ASN HD21 H N N 97 ASN HD22 H N N 98 ASN HXT H N N 99 ASP N N N N 100 ASP CA C N S 101 ASP C C N N 102 ASP O O N N 103 ASP CB C N N 104 ASP CG C N N 105 ASP OD1 O N N 106 ASP OD2 O N N 107 ASP OXT O N N 108 ASP H H N N 109 ASP H2 H N N 110 ASP HA H N N 111 ASP HB2 H N N 112 ASP HB3 H N N 113 ASP HD2 H N N 114 ASP HXT H N N 115 GLN N N N N 116 GLN CA C N S 117 GLN C C N N 118 GLN O O N N 119 GLN CB C N N 120 GLN CG C N N 121 GLN CD C N N 122 GLN OE1 O N N 123 GLN NE2 N N N 124 GLN OXT O N N 125 GLN H H N N 126 GLN H2 H N N 127 GLN HA H N N 128 GLN HB2 H N N 129 GLN HB3 H N N 130 GLN HG2 H N N 131 GLN HG3 H N N 132 GLN HE21 H N N 133 GLN HE22 H N N 134 GLN HXT H N N 135 GLU N N N N 136 GLU CA C N S 137 GLU C C N N 138 GLU O O N N 139 GLU CB C N N 140 GLU CG C N N 141 GLU CD C N N 142 GLU OE1 O N N 143 GLU OE2 O N N 144 GLU OXT O N N 145 GLU H H N N 146 GLU H2 H N N 147 GLU HA H N N 148 GLU HB2 H N N 149 GLU HB3 H N N 150 GLU HG2 H N N 151 GLU HG3 H N N 152 GLU HE2 H N N 153 GLU HXT H N N 154 GLY N N N N 155 GLY CA C N N 156 GLY C C N N 157 GLY O O N N 158 GLY OXT O N N 159 GLY H H N N 160 GLY H2 H N N 161 GLY HA2 H N N 162 GLY HA3 H N N 163 GLY HXT H N N 164 HIS N N N N 165 HIS CA C N S 166 HIS C C N N 167 HIS O O N N 168 HIS CB C N N 169 HIS CG C Y N 170 HIS ND1 N Y N 171 HIS CD2 C Y N 172 HIS CE1 C Y N 173 HIS NE2 N Y N 174 HIS OXT O N N 175 HIS H H N N 176 HIS H2 H N N 177 HIS HA H N N 178 HIS HB2 H N N 179 HIS HB3 H N N 180 HIS HD1 H N N 181 HIS HD2 H N N 182 HIS HE1 H N N 183 HIS HE2 H N N 184 HIS HXT H N N 185 HOH O O N N 186 HOH H1 H N N 187 HOH H2 H N N 188 ILE N N N N 189 ILE CA C N S 190 ILE C C N N 191 ILE O O N N 192 ILE CB C N S 193 ILE CG1 C N N 194 ILE CG2 C N N 195 ILE CD1 C N N 196 ILE OXT O N N 197 ILE H H N N 198 ILE H2 H N N 199 ILE HA H N N 200 ILE HB H N N 201 ILE HG12 H N N 202 ILE HG13 H N N 203 ILE HG21 H N N 204 ILE HG22 H N N 205 ILE HG23 H N N 206 ILE HD11 H N N 207 ILE HD12 H N N 208 ILE HD13 H N N 209 ILE HXT H N N 210 LEU N N N N 211 LEU CA C N S 212 LEU C C N N 213 LEU O O N N 214 LEU CB C N N 215 LEU CG C N N 216 LEU CD1 C N N 217 LEU CD2 C N N 218 LEU OXT O N N 219 LEU H H N N 220 LEU H2 H N N 221 LEU HA H N N 222 LEU HB2 H N N 223 LEU HB3 H N N 224 LEU HG H N N 225 LEU HD11 H N N 226 LEU HD12 H N N 227 LEU HD13 H N N 228 LEU HD21 H N N 229 LEU HD22 H N N 230 LEU HD23 H N N 231 LEU HXT H N N 232 LYS N N N N 233 LYS CA C N S 234 LYS C C N N 235 LYS O O N N 236 LYS CB C N N 237 LYS CG C N N 238 LYS CD C N N 239 LYS CE C N N 240 LYS NZ N N N 241 LYS OXT O N N 242 LYS H H N N 243 LYS H2 H N N 244 LYS HA H N N 245 LYS HB2 H N N 246 LYS HB3 H N N 247 LYS HG2 H N N 248 LYS HG3 H N N 249 LYS HD2 H N N 250 LYS HD3 H N N 251 LYS HE2 H N N 252 LYS HE3 H N N 253 LYS HZ1 H N N 254 LYS HZ2 H N N 255 LYS HZ3 H N N 256 LYS HXT H N N 257 MET N N N N 258 MET CA C N S 259 MET C C N N 260 MET O O N N 261 MET CB C N N 262 MET CG C N N 263 MET SD S N N 264 MET CE C N N 265 MET OXT O N N 266 MET H H N N 267 MET H2 H N N 268 MET HA H N N 269 MET HB2 H N N 270 MET HB3 H N N 271 MET HG2 H N N 272 MET HG3 H N N 273 MET HE1 H N N 274 MET HE2 H N N 275 MET HE3 H N N 276 MET HXT H N N 277 PHE N N N N 278 PHE CA C N S 279 PHE C C N N 280 PHE O O N N 281 PHE CB C N N 282 PHE CG C Y N 283 PHE CD1 C Y N 284 PHE CD2 C Y N 285 PHE CE1 C Y N 286 PHE CE2 C Y N 287 PHE CZ C Y N 288 PHE OXT O N N 289 PHE H H N N 290 PHE H2 H N N 291 PHE HA H N N 292 PHE HB2 H N N 293 PHE HB3 H N N 294 PHE HD1 H N N 295 PHE HD2 H N N 296 PHE HE1 H N N 297 PHE HE2 H N N 298 PHE HZ H N N 299 PHE HXT H N N 300 PRO N N N N 301 PRO CA C N S 302 PRO C C N N 303 PRO O O N N 304 PRO CB C N N 305 PRO CG C N N 306 PRO CD C N N 307 PRO OXT O N N 308 PRO H H N N 309 PRO HA H N N 310 PRO HB2 H N N 311 PRO HB3 H N N 312 PRO HG2 H N N 313 PRO HG3 H N N 314 PRO HD2 H N N 315 PRO HD3 H N N 316 PRO HXT H N N 317 SER N N N N 318 SER CA C N S 319 SER C C N N 320 SER O O N N 321 SER CB C N N 322 SER OG O N N 323 SER OXT O N N 324 SER H H N N 325 SER H2 H N N 326 SER HA H N N 327 SER HB2 H N N 328 SER HB3 H N N 329 SER HG H N N 330 SER HXT H N N 331 SO4 S S N N 332 SO4 O1 O N N 333 SO4 O2 O N N 334 SO4 O3 O N N 335 SO4 O4 O N N 336 THR N N N N 337 THR CA C N S 338 THR C C N N 339 THR O O N N 340 THR CB C N R 341 THR OG1 O N N 342 THR CG2 C N N 343 THR OXT O N N 344 THR H H N N 345 THR H2 H N N 346 THR HA H N N 347 THR HB H N N 348 THR HG1 H N N 349 THR HG21 H N N 350 THR HG22 H N N 351 THR HG23 H N N 352 THR HXT H N N 353 TYR N N N N 354 TYR CA C N S 355 TYR C C N N 356 TYR O O N N 357 TYR CB C N N 358 TYR CG C Y N 359 TYR CD1 C Y N 360 TYR CD2 C Y N 361 TYR CE1 C Y N 362 TYR CE2 C Y N 363 TYR CZ C Y N 364 TYR OH O N N 365 TYR OXT O N N 366 TYR H H N N 367 TYR H2 H N N 368 TYR HA H N N 369 TYR HB2 H N N 370 TYR HB3 H N N 371 TYR HD1 H N N 372 TYR HD2 H N N 373 TYR HE1 H N N 374 TYR HE2 H N N 375 TYR HH H N N 376 TYR HXT H N N 377 VAL N N N N 378 VAL CA C N S 379 VAL C C N N 380 VAL O O N N 381 VAL CB C N N 382 VAL CG1 C N N 383 VAL CG2 C N N 384 VAL OXT O N N 385 VAL H H N N 386 VAL H2 H N N 387 VAL HA H N N 388 VAL HB H N N 389 VAL HG11 H N N 390 VAL HG12 H N N 391 VAL HG13 H N N 392 VAL HG21 H N N 393 VAL HG22 H N N 394 VAL HG23 H N N 395 VAL HXT H N N 396 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A2P P1 O1P doub N N 1 A2P P1 O2P sing N N 2 A2P P1 O3P sing N N 3 A2P P1 "O2'" sing N N 4 A2P O2P HOP2 sing N N 5 A2P O3P HOP3 sing N N 6 A2P P2 O4P doub N N 7 A2P P2 O5P sing N N 8 A2P P2 O6P sing N N 9 A2P P2 "O5'" sing N N 10 A2P O5P HOP5 sing N N 11 A2P O6P HOP6 sing N N 12 A2P "O5'" "C5'" sing N N 13 A2P "C5'" "C4'" sing N N 14 A2P "C5'" "H5'1" sing N N 15 A2P "C5'" "H5'2" sing N N 16 A2P "C4'" "O4'" sing N N 17 A2P "C4'" "C3'" sing N N 18 A2P "C4'" "H4'" sing N N 19 A2P "O4'" "C1'" sing N N 20 A2P "C3'" "O3'" sing N N 21 A2P "C3'" "C2'" sing N N 22 A2P "C3'" "H3'" sing N N 23 A2P "O3'" "HO3'" sing N N 24 A2P "C2'" "O2'" sing N N 25 A2P "C2'" "C1'" sing N N 26 A2P "C2'" "H2'" sing N N 27 A2P "C1'" N9 sing N N 28 A2P "C1'" "H1'" sing N N 29 A2P N9 C8 sing Y N 30 A2P N9 C4 sing Y N 31 A2P C8 N7 doub Y N 32 A2P C8 H8 sing N N 33 A2P N7 C5 sing Y N 34 A2P C5 C6 sing Y N 35 A2P C5 C4 doub Y N 36 A2P C6 N6 sing N N 37 A2P C6 N1 doub Y N 38 A2P N6 HN61 sing N N 39 A2P N6 HN62 sing N N 40 A2P N1 C2 sing Y N 41 A2P C2 N3 doub Y N 42 A2P C2 H2 sing N N 43 A2P N3 C4 sing Y N 44 ALA N CA sing N N 45 ALA N H sing N N 46 ALA N H2 sing N N 47 ALA CA C sing N N 48 ALA CA CB sing N N 49 ALA CA HA sing N N 50 ALA C O doub N N 51 ALA C OXT sing N N 52 ALA CB HB1 sing N N 53 ALA CB HB2 sing N N 54 ALA CB HB3 sing N N 55 ALA OXT HXT sing N N 56 ARG N CA sing N N 57 ARG N H sing N N 58 ARG N H2 sing N N 59 ARG CA C sing N N 60 ARG CA CB sing N N 61 ARG CA HA sing N N 62 ARG C O doub N N 63 ARG C OXT sing N N 64 ARG CB CG sing N N 65 ARG CB HB2 sing N N 66 ARG CB HB3 sing N N 67 ARG CG CD sing N N 68 ARG CG HG2 sing N N 69 ARG CG HG3 sing N N 70 ARG CD NE sing N N 71 ARG CD HD2 sing N N 72 ARG CD HD3 sing N N 73 ARG NE CZ sing N N 74 ARG NE HE sing N N 75 ARG CZ NH1 sing N N 76 ARG CZ NH2 doub N N 77 ARG NH1 HH11 sing N N 78 ARG NH1 HH12 sing N N 79 ARG NH2 HH21 sing N N 80 ARG NH2 HH22 sing N N 81 ARG OXT HXT sing N N 82 ASN N CA sing N N 83 ASN N H sing N N 84 ASN N H2 sing N N 85 ASN CA C sing N N 86 ASN CA CB sing N N 87 ASN CA HA sing N N 88 ASN C O doub N N 89 ASN C OXT sing N N 90 ASN CB CG sing N N 91 ASN CB HB2 sing N N 92 ASN CB HB3 sing N N 93 ASN CG OD1 doub N N 94 ASN CG ND2 sing N N 95 ASN ND2 HD21 sing N N 96 ASN ND2 HD22 sing N N 97 ASN OXT HXT sing N N 98 ASP N CA sing N N 99 ASP N H sing N N 100 ASP N H2 sing N N 101 ASP CA C sing N N 102 ASP CA CB sing N N 103 ASP CA HA sing N N 104 ASP C O doub N N 105 ASP C OXT sing N N 106 ASP CB CG sing N N 107 ASP CB HB2 sing N N 108 ASP CB HB3 sing N N 109 ASP CG OD1 doub N N 110 ASP CG OD2 sing N N 111 ASP OD2 HD2 sing N N 112 ASP OXT HXT sing N N 113 GLN N CA sing N N 114 GLN N H sing N N 115 GLN N H2 sing N N 116 GLN CA C sing N N 117 GLN CA CB sing N N 118 GLN CA HA sing N N 119 GLN C O doub N N 120 GLN C OXT sing N N 121 GLN CB CG sing N N 122 GLN CB HB2 sing N N 123 GLN CB HB3 sing N N 124 GLN CG CD sing N N 125 GLN CG HG2 sing N N 126 GLN CG HG3 sing N N 127 GLN CD OE1 doub N N 128 GLN CD NE2 sing N N 129 GLN NE2 HE21 sing N N 130 GLN NE2 HE22 sing N N 131 GLN OXT HXT sing N N 132 GLU N CA sing N N 133 GLU N H sing N N 134 GLU N H2 sing N N 135 GLU CA C sing N N 136 GLU CA CB sing N N 137 GLU CA HA sing N N 138 GLU C O doub N N 139 GLU C OXT sing N N 140 GLU CB CG sing N N 141 GLU CB HB2 sing N N 142 GLU CB HB3 sing N N 143 GLU CG CD sing N N 144 GLU CG HG2 sing N N 145 GLU CG HG3 sing N N 146 GLU CD OE1 doub N N 147 GLU CD OE2 sing N N 148 GLU OE2 HE2 sing N N 149 GLU OXT HXT sing N N 150 GLY N CA sing N N 151 GLY N H sing N N 152 GLY N H2 sing N N 153 GLY CA C sing N N 154 GLY CA HA2 sing N N 155 GLY CA HA3 sing N N 156 GLY C O doub N N 157 GLY C OXT sing N N 158 GLY OXT HXT sing N N 159 HIS N CA sing N N 160 HIS N H sing N N 161 HIS N H2 sing N N 162 HIS CA C sing N N 163 HIS CA CB sing N N 164 HIS CA HA sing N N 165 HIS C O doub N N 166 HIS C OXT sing N N 167 HIS CB CG sing N N 168 HIS CB HB2 sing N N 169 HIS CB HB3 sing N N 170 HIS CG ND1 sing Y N 171 HIS CG CD2 doub Y N 172 HIS ND1 CE1 doub Y N 173 HIS ND1 HD1 sing N N 174 HIS CD2 NE2 sing Y N 175 HIS CD2 HD2 sing N N 176 HIS CE1 NE2 sing Y N 177 HIS CE1 HE1 sing N N 178 HIS NE2 HE2 sing N N 179 HIS OXT HXT sing N N 180 HOH O H1 sing N N 181 HOH O H2 sing N N 182 ILE N CA sing N N 183 ILE N H sing N N 184 ILE N H2 sing N N 185 ILE CA C sing N N 186 ILE CA CB sing N N 187 ILE CA HA sing N N 188 ILE C O doub N N 189 ILE C OXT sing N N 190 ILE CB CG1 sing N N 191 ILE CB CG2 sing N N 192 ILE CB HB sing N N 193 ILE CG1 CD1 sing N N 194 ILE CG1 HG12 sing N N 195 ILE CG1 HG13 sing N N 196 ILE CG2 HG21 sing N N 197 ILE CG2 HG22 sing N N 198 ILE CG2 HG23 sing N N 199 ILE CD1 HD11 sing N N 200 ILE CD1 HD12 sing N N 201 ILE CD1 HD13 sing N N 202 ILE OXT HXT sing N N 203 LEU N CA sing N N 204 LEU N H sing N N 205 LEU N H2 sing N N 206 LEU CA C sing N N 207 LEU CA CB sing N N 208 LEU CA HA sing N N 209 LEU C O doub N N 210 LEU C OXT sing N N 211 LEU CB CG sing N N 212 LEU CB HB2 sing N N 213 LEU CB HB3 sing N N 214 LEU CG CD1 sing N N 215 LEU CG CD2 sing N N 216 LEU CG HG sing N N 217 LEU CD1 HD11 sing N N 218 LEU CD1 HD12 sing N N 219 LEU CD1 HD13 sing N N 220 LEU CD2 HD21 sing N N 221 LEU CD2 HD22 sing N N 222 LEU CD2 HD23 sing N N 223 LEU OXT HXT sing N N 224 LYS N CA sing N N 225 LYS N H sing N N 226 LYS N H2 sing N N 227 LYS CA C sing N N 228 LYS CA CB sing N N 229 LYS CA HA sing N N 230 LYS C O doub N N 231 LYS C OXT sing N N 232 LYS CB CG sing N N 233 LYS CB HB2 sing N N 234 LYS CB HB3 sing N N 235 LYS CG CD sing N N 236 LYS CG HG2 sing N N 237 LYS CG HG3 sing N N 238 LYS CD CE sing N N 239 LYS CD HD2 sing N N 240 LYS CD HD3 sing N N 241 LYS CE NZ sing N N 242 LYS CE HE2 sing N N 243 LYS CE HE3 sing N N 244 LYS NZ HZ1 sing N N 245 LYS NZ HZ2 sing N N 246 LYS NZ HZ3 sing N N 247 LYS OXT HXT sing N N 248 MET N CA sing N N 249 MET N H sing N N 250 MET N H2 sing N N 251 MET CA C sing N N 252 MET CA CB sing N N 253 MET CA HA sing N N 254 MET C O doub N N 255 MET C OXT sing N N 256 MET CB CG sing N N 257 MET CB HB2 sing N N 258 MET CB HB3 sing N N 259 MET CG SD sing N N 260 MET CG HG2 sing N N 261 MET CG HG3 sing N N 262 MET SD CE sing N N 263 MET CE HE1 sing N N 264 MET CE HE2 sing N N 265 MET CE HE3 sing N N 266 MET OXT HXT sing N N 267 PHE N CA sing N N 268 PHE N H sing N N 269 PHE N H2 sing N N 270 PHE CA C sing N N 271 PHE CA CB sing N N 272 PHE CA HA sing N N 273 PHE C O doub N N 274 PHE C OXT sing N N 275 PHE CB CG sing N N 276 PHE CB HB2 sing N N 277 PHE CB HB3 sing N N 278 PHE CG CD1 doub Y N 279 PHE CG CD2 sing Y N 280 PHE CD1 CE1 sing Y N 281 PHE CD1 HD1 sing N N 282 PHE CD2 CE2 doub Y N 283 PHE CD2 HD2 sing N N 284 PHE CE1 CZ doub Y N 285 PHE CE1 HE1 sing N N 286 PHE CE2 CZ sing Y N 287 PHE CE2 HE2 sing N N 288 PHE CZ HZ sing N N 289 PHE OXT HXT sing N N 290 PRO N CA sing N N 291 PRO N CD sing N N 292 PRO N H sing N N 293 PRO CA C sing N N 294 PRO CA CB sing N N 295 PRO CA HA sing N N 296 PRO C O doub N N 297 PRO C OXT sing N N 298 PRO CB CG sing N N 299 PRO CB HB2 sing N N 300 PRO CB HB3 sing N N 301 PRO CG CD sing N N 302 PRO CG HG2 sing N N 303 PRO CG HG3 sing N N 304 PRO CD HD2 sing N N 305 PRO CD HD3 sing N N 306 PRO OXT HXT sing N N 307 SER N CA sing N N 308 SER N H sing N N 309 SER N H2 sing N N 310 SER CA C sing N N 311 SER CA CB sing N N 312 SER CA HA sing N N 313 SER C O doub N N 314 SER C OXT sing N N 315 SER CB OG sing N N 316 SER CB HB2 sing N N 317 SER CB HB3 sing N N 318 SER OG HG sing N N 319 SER OXT HXT sing N N 320 SO4 S O1 doub N N 321 SO4 S O2 doub N N 322 SO4 S O3 sing N N 323 SO4 S O4 sing N N 324 THR N CA sing N N 325 THR N H sing N N 326 THR N H2 sing N N 327 THR CA C sing N N 328 THR CA CB sing N N 329 THR CA HA sing N N 330 THR C O doub N N 331 THR C OXT sing N N 332 THR CB OG1 sing N N 333 THR CB CG2 sing N N 334 THR CB HB sing N N 335 THR OG1 HG1 sing N N 336 THR CG2 HG21 sing N N 337 THR CG2 HG22 sing N N 338 THR CG2 HG23 sing N N 339 THR OXT HXT sing N N 340 TYR N CA sing N N 341 TYR N H sing N N 342 TYR N H2 sing N N 343 TYR CA C sing N N 344 TYR CA CB sing N N 345 TYR CA HA sing N N 346 TYR C O doub N N 347 TYR C OXT sing N N 348 TYR CB CG sing N N 349 TYR CB HB2 sing N N 350 TYR CB HB3 sing N N 351 TYR CG CD1 doub Y N 352 TYR CG CD2 sing Y N 353 TYR CD1 CE1 sing Y N 354 TYR CD1 HD1 sing N N 355 TYR CD2 CE2 doub Y N 356 TYR CD2 HD2 sing N N 357 TYR CE1 CZ doub Y N 358 TYR CE1 HE1 sing N N 359 TYR CE2 CZ sing Y N 360 TYR CE2 HE2 sing N N 361 TYR CZ OH sing N N 362 TYR OH HH sing N N 363 TYR OXT HXT sing N N 364 VAL N CA sing N N 365 VAL N H sing N N 366 VAL N H2 sing N N 367 VAL CA C sing N N 368 VAL CA CB sing N N 369 VAL CA HA sing N N 370 VAL C O doub N N 371 VAL C OXT sing N N 372 VAL CB CG1 sing N N 373 VAL CB CG2 sing N N 374 VAL CB HB sing N N 375 VAL CG1 HG11 sing N N 376 VAL CG1 HG12 sing N N 377 VAL CG1 HG13 sing N N 378 VAL CG2 HG21 sing N N 379 VAL CG2 HG22 sing N N 380 VAL CG2 HG23 sing N N 381 VAL OXT HXT sing N N 382 # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number AI36040 _pdbx_audit_support.ordinal 1 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 "ADENOSINE-2'-5'-DIPHOSPHATE" A2P 3 'SULFATE ION' SO4 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 4RPT _pdbx_initial_refinement_model.details ? #