HEADER DNA BINDING PROTEIN/DNA 24-FEB-15 4YEY TITLE HUAA-20BP COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA-BINDING PROTEIN HU-ALPHA; COMPND 3 CHAIN: A, C; COMPND 4 SYNONYM: HU-2,NS2; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: SYNTHETIC DNA STRAND; COMPND 8 CHAIN: B; COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 3; COMPND 11 MOLECULE: SYNTHETIC DNA STRAND; COMPND 12 CHAIN: D; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 GENE: HUPA; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: ES; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 11 ORGANISM_TAXID: 562; SOURCE 12 MOL_ID: 3; SOURCE 13 SYNTHETIC: YES; SOURCE 14 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 15 ORGANISM_TAXID: 562 KEYWDS HU-DNA, TRANSCRIPTION, PATHOGENICITY, DNA BINDING PROTEIN-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR M.HAMMEL,F.E.REYES,R.PARPANA,J.A.TAINER,S.ADHYA,D.AMLANJYOTI REVDAT 3 27-SEP-23 4YEY 1 REMARK REVDAT 2 20-FEB-19 4YEY 1 JRNL REMARK REVDAT 1 29-JUN-16 4YEY 0 JRNL AUTH M.HAMMEL,D.AMLANJYOTI,F.E.REYES,J.H.CHEN,R.PARPANA,H.Y.TANG, JRNL AUTH 2 C.A.LARABELL,J.A.TAINER,S.ADHYA JRNL TITL HU MULTIMERIZATION SHIFT CONTROLS NUCLEOID COMPACTION. JRNL REF SCI ADV V. 2 00650 2016 JRNL REFN ESSN 2375-2548 JRNL PMID 27482541 JRNL DOI 10.1126/SCIADV.1600650 REMARK 2 REMARK 2 RESOLUTION. 3.35 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER-TNT BUSTER 2.10.0 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.35 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 58.08 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 3 NUMBER OF REFLECTIONS : 4556 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.237 REMARK 3 R VALUE (WORKING SET) : 0.235 REMARK 3 FREE R VALUE : 0.267 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.610 REMARK 3 FREE R VALUE TEST SET COUNT : 210 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 5 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 3.35 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 3.75 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.55 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 1258 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.3000 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 1199 REMARK 3 BIN R VALUE (WORKING SET) : 0.2986 REMARK 3 BIN FREE R VALUE : 0.3288 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.69 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 59 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1060 REMARK 3 NUCLEIC ACID ATOMS : 571 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 150.2 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -18.10160 REMARK 3 B22 (A**2) : 2.32720 REMARK 3 B33 (A**2) : 15.77440 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -45.96370 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 1.059 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.530 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.912 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.907 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 1695 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 2389 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 523 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 29 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 180 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 1695 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 244 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 1768 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.14 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 1.99 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 23.52 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE ASYMMETRIC UNIT OF THE CRYSTAL REMARK 3 CONTAINS MULTIPLE, OUT-OF-REGISTER DUPLEX POSITIONS, SUCH THAT REMARK 3 BACKBONES SUPERIMPOSE, BUT BASE IDENTITY DIFFERS. THE DENSITY IS REMARK 3 AN AVERAGE OF ALL NUCLEOTIDES, AND THE DNA CHAIN WAS BUILT REMARK 3 ACCORDINGLY. REMARK 4 REMARK 4 4YEY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-MAR-15. REMARK 100 THE DEPOSITION ID IS D_1000207344. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-JAN-13 REMARK 200 TEMPERATURE (KELVIN) : 93.15 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 12.3.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : Q315R REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 4566 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.354 REMARK 200 RESOLUTION RANGE LOW (A) : 58.080 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 3.500 REMARK 200 R MERGE (I) : 0.04600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.0300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.35 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.37 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.41 REMARK 200 R MERGE FOR SHELL (I) : 0.70800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.701 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 1MUL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.90 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.99 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M BIS-TRIS PH 6.5, 45% 2-METHYL-2,4 REMARK 280 -PENTADIOL, 0.2M NH4F, VAPOR DIFFUSION, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 53.65000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 25.37500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 53.65000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 25.37500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5750 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12630 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -54.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, D, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 56 REMARK 465 GLU A 57 REMARK 465 ARG A 58 REMARK 465 THR A 59 REMARK 465 GLY A 60 REMARK 465 ARG A 61 REMARK 465 ASN A 62 REMARK 465 PRO A 63 REMARK 465 GLN A 64 REMARK 465 THR A 65 REMARK 465 GLY A 66 REMARK 465 LYS A 67 REMARK 465 GLU A 68 REMARK 465 ILE A 69 REMARK 465 LYS A 70 REMARK 465 ILE A 71 REMARK 465 ALA A 72 REMARK 465 ALA A 73 REMARK 465 ARG C 55 REMARK 465 ALA C 56 REMARK 465 GLU C 57 REMARK 465 ARG C 58 REMARK 465 THR C 59 REMARK 465 GLY C 60 REMARK 465 ARG C 61 REMARK 465 ASN C 62 REMARK 465 PRO C 63 REMARK 465 GLN C 64 REMARK 465 THR C 65 REMARK 465 GLY C 66 REMARK 465 LYS C 67 REMARK 465 GLU C 68 REMARK 465 ILE C 69 REMARK 465 LYS C 70 REMARK 465 ILE C 71 REMARK 465 ALA C 72 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 12 CG CD OE1 OE2 REMARK 470 ARG A 55 NE CZ NH1 NH2 REMARK 470 LYS A 90 CD CE NZ REMARK 470 LYS C 90 CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DC B 6 C1' DC B 6 N1 0.085 REMARK 500 DC B 8 C1' DC B 8 N1 0.080 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DC B 6 O4' - C1' - N1 ANGL. DEV. = 2.2 DEGREES REMARK 500 DC B 7 O4' - C1' - N1 ANGL. DEV. = 2.5 DEGREES REMARK 500 DC B 13 O4' - C1' - N1 ANGL. DEV. = 5.0 DEGREES REMARK 500 DC B 17 O4' - C1' - N1 ANGL. DEV. = 2.1 DEGREES REMARK 500 DC B 18 O4' - C1' - N1 ANGL. DEV. = 2.2 DEGREES REMARK 500 DC B 19 O4' - C1' - N1 ANGL. DEV. = 2.7 DEGREES REMARK 500 DC D 101 O4' - C1' - N1 ANGL. DEV. = 1.8 DEGREES REMARK 500 DC D 105 O4' - C1' - N1 ANGL. DEV. = 2.2 DEGREES REMARK 500 DC D 106 O4' - C1' - N1 ANGL. DEV. = 2.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 54 59.84 -90.84 REMARK 500 PHE C 47 -80.48 -84.54 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4YEW RELATED DB: PDB REMARK 900 RELATED ID: 4YEX RELATED DB: PDB REMARK 900 RELATED ID: 4YF0 RELATED DB: PDB REMARK 900 RELATED ID: 4YFH RELATED DB: PDB REMARK 900 RELATED ID: 4YFT RELATED DB: PDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 DNA SAMPLE SEQUENCE USED IN EXPERIMENT IS 5'-GTTCAATTGTTGTTAACTTG-3' REMARK 999 . BUT THE ASYMMETRIC UNIT CONTAINS MULTIPLE, OUT-OF-REGISTER DUPLEX REMARK 999 POSITIONS, SO THE DNA CHAIN IS MODELED ACCORDING TO AVERAGED REMARK 999 DENSITY. DBREF 4YEY A 1 90 UNP P0ACF2 DBHA_ECO57 1 90 DBREF 4YEY B 6 20 PDB 4YEY 4YEY 6 20 DBREF 4YEY D 101 115 PDB 4YEY 4YEY 101 115 DBREF 4YEY C 1 90 UNP P0ACF2 DBHA_ECO57 1 90 SEQADV 4YEY ALA A 0 UNP P0ACF2 EXPRESSION TAG SEQADV 4YEY ALA C 0 UNP P0ACF2 EXPRESSION TAG SEQRES 1 A 91 ALA MET ASN LYS THR GLN LEU ILE ASP VAL ILE ALA GLU SEQRES 2 A 91 LYS ALA GLU LEU SER LYS THR GLN ALA LYS ALA ALA LEU SEQRES 3 A 91 GLU SER THR LEU ALA ALA ILE THR GLU SER LEU LYS GLU SEQRES 4 A 91 GLY ASP ALA VAL GLN LEU VAL GLY PHE GLY THR PHE LYS SEQRES 5 A 91 VAL ASN HIS ARG ALA GLU ARG THR GLY ARG ASN PRO GLN SEQRES 6 A 91 THR GLY LYS GLU ILE LYS ILE ALA ALA ALA ASN VAL PRO SEQRES 7 A 91 ALA PHE VAL SER GLY LYS ALA LEU LYS ASP ALA VAL LYS SEQRES 1 B 15 DC DC DC DC DC DC DC DC DC DC DC DC DC SEQRES 2 B 15 DC DT SEQRES 1 D 15 DC DC DC DC DC DC DC DC DC DC DC DC DC SEQRES 2 D 15 DC DC SEQRES 1 C 91 ALA MET ASN LYS THR GLN LEU ILE ASP VAL ILE ALA GLU SEQRES 2 C 91 LYS ALA GLU LEU SER LYS THR GLN ALA LYS ALA ALA LEU SEQRES 3 C 91 GLU SER THR LEU ALA ALA ILE THR GLU SER LEU LYS GLU SEQRES 4 C 91 GLY ASP ALA VAL GLN LEU VAL GLY PHE GLY THR PHE LYS SEQRES 5 C 91 VAL ASN HIS ARG ALA GLU ARG THR GLY ARG ASN PRO GLN SEQRES 6 C 91 THR GLY LYS GLU ILE LYS ILE ALA ALA ALA ASN VAL PRO SEQRES 7 C 91 ALA PHE VAL SER GLY LYS ALA LEU LYS ASP ALA VAL LYS HELIX 1 AA1 LYS A 3 ALA A 14 1 12 HELIX 2 AA2 SER A 17 GLU A 38 1 22 HELIX 3 AA3 GLY A 82 LYS A 90 1 9 HELIX 4 AA4 LYS C 3 ALA C 14 1 12 HELIX 5 AA5 SER C 17 GLU C 38 1 22 HELIX 6 AA6 GLY C 82 LYS C 90 1 9 SHEET 1 AA1 4 MET A 1 ASN A 2 0 SHEET 2 AA1 4 VAL C 42 LEU C 44 1 O GLN C 43 N MET A 1 SHEET 3 AA1 4 GLY C 48 ASN C 53 -1 O PHE C 50 N VAL C 42 SHEET 4 AA1 4 VAL C 76 SER C 81 -1 O VAL C 76 N ASN C 53 SHEET 1 AA2 4 VAL A 76 SER A 81 0 SHEET 2 AA2 4 GLY A 48 ASN A 53 -1 N ASN A 53 O VAL A 76 SHEET 3 AA2 4 VAL A 42 LEU A 44 -1 N VAL A 42 O PHE A 50 SHEET 4 AA2 4 MET C 1 ASN C 2 1 O MET C 1 N GLN A 43 CRYST1 107.300 50.750 62.830 90.00 112.42 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009320 0.000000 0.003845 0.00000 SCALE2 0.000000 0.019704 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017217 0.00000