HEADER LYASE 25-FEB-15 4YF5 TITLE CRYSTAL STRUCTURE OF RV1284 IN THE PRESENCE OF POLYCARPINE AT ACIDIC TITLE 2 PH COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-CARBONIC ANHYDRASE 1; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: BETA-CA 1,CARBONATE DEHYDRATASE 1,MTCA 1; COMPND 5 EC: 4.2.1.1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS (STRAIN CDC 1551 / SOURCE 3 OSHKOSH); SOURCE 4 ORGANISM_TAXID: 83331; SOURCE 5 STRAIN: CDC 1551 / OSHKOSH; SOURCE 6 GENE: MTCA1, CANA, MT1322; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 866768; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21AI; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PCR T7 KEYWDS BETA-CARBONIC ANHYDRASE, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR A.HOFMANN REVDAT 5 27-SEP-23 4YF5 1 LINK REVDAT 4 22-NOV-17 4YF5 1 SOURCE REMARK REVDAT 3 22-JUL-15 4YF5 1 JRNL REVDAT 2 13-MAY-15 4YF5 1 JRNL REVDAT 1 06-MAY-15 4YF5 0 JRNL AUTH L.NIENABER,E.CAVE-FREEMAN,M.CROSS,L.MASON,U.M.BAILEY, JRNL AUTH 2 P.AMANI,R.A DAVIS,P.TAYLOR,A.HOFMANN JRNL TITL CHEMICAL PROBING SUGGESTS REDOX-REGULATION OF THE CARBONIC JRNL TITL 2 ANHYDRASE ACTIVITY OF MYCOBACTERIAL RV1284. JRNL REF FEBS J. V. 282 2708 2015 JRNL REFN ISSN 1742-464X JRNL PMID 25929542 JRNL DOI 10.1111/FEBS.13313 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.4_1496) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 24.56 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.920 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 3 NUMBER OF REFLECTIONS : 81481 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.200 REMARK 3 R VALUE (WORKING SET) : 0.197 REMARK 3 FREE R VALUE : 0.260 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.060 REMARK 3 FREE R VALUE TEST SET COUNT : 4121 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 24.5625 - 6.1141 0.99 2704 140 0.1610 0.1923 REMARK 3 2 6.1141 - 4.8653 1.00 2715 143 0.1486 0.1691 REMARK 3 3 4.8653 - 4.2539 1.00 2703 160 0.1264 0.2025 REMARK 3 4 4.2539 - 3.8666 1.00 2725 124 0.1454 0.1758 REMARK 3 5 3.8666 - 3.5903 1.00 2717 138 0.1660 0.1990 REMARK 3 6 3.5903 - 3.3792 1.00 2704 143 0.1718 0.2165 REMARK 3 7 3.3792 - 3.2104 1.00 2721 133 0.1813 0.2530 REMARK 3 8 3.2104 - 3.0709 1.00 2703 120 0.1925 0.2382 REMARK 3 9 3.0709 - 2.9529 1.00 2752 141 0.1805 0.2362 REMARK 3 10 2.9529 - 2.8511 1.00 2719 130 0.2020 0.2338 REMARK 3 11 2.8511 - 2.7621 1.00 2711 148 0.1993 0.2937 REMARK 3 12 2.7621 - 2.6833 1.00 2684 170 0.2024 0.2932 REMARK 3 13 2.6833 - 2.6127 1.00 2700 138 0.2051 0.2868 REMARK 3 14 2.6127 - 2.5490 1.00 2715 138 0.2216 0.2685 REMARK 3 15 2.5490 - 2.4911 1.00 2690 160 0.2089 0.3102 REMARK 3 16 2.4911 - 2.4382 1.00 2690 142 0.2007 0.3472 REMARK 3 17 2.4382 - 2.3894 1.00 2719 137 0.1884 0.2306 REMARK 3 18 2.3894 - 2.3444 1.00 2733 153 0.2035 0.2856 REMARK 3 19 2.3444 - 2.3025 1.00 2617 174 0.2162 0.3200 REMARK 3 20 2.3025 - 2.2635 0.90 2452 131 0.2979 0.3448 REMARK 3 21 2.2635 - 2.2271 0.89 2424 141 0.4781 0.5808 REMARK 3 22 2.2271 - 2.1928 0.81 2155 111 0.3694 0.4173 REMARK 3 23 2.1928 - 2.1606 1.00 2691 145 0.2521 0.3406 REMARK 3 24 2.1606 - 2.1302 1.00 2731 142 0.2495 0.3275 REMARK 3 25 2.1302 - 2.1014 1.00 2688 126 0.2356 0.3369 REMARK 3 26 2.1014 - 2.0741 0.99 2687 148 0.2326 0.3664 REMARK 3 27 2.0741 - 2.0482 0.99 2705 146 0.2288 0.2502 REMARK 3 28 2.0482 - 2.0235 1.00 2671 139 0.2503 0.3088 REMARK 3 29 2.0235 - 2.0000 0.99 2734 160 0.2675 0.3129 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.270 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.320 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 5186 REMARK 3 ANGLE : 1.113 7040 REMARK 3 CHIRALITY : 0.044 816 REMARK 3 PLANARITY : 0.006 919 REMARK 3 DIHEDRAL : 12.942 1922 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A OR CHAIN B REMARK 3 ORIGIN FOR THE GROUP (A): -0.4294 -36.2696 -17.1685 REMARK 3 T TENSOR REMARK 3 T11: 0.1196 T22: 0.0813 REMARK 3 T33: 0.1034 T12: -0.0189 REMARK 3 T13: -0.0043 T23: -0.0238 REMARK 3 L TENSOR REMARK 3 L11: 0.2312 L22: 0.1962 REMARK 3 L33: 0.4609 L12: -0.0307 REMARK 3 L13: -0.0115 L23: -0.0457 REMARK 3 S TENSOR REMARK 3 S11: 0.1395 S12: 0.0773 S13: -0.0111 REMARK 3 S21: -0.1123 S22: 0.0862 S23: 0.0287 REMARK 3 S31: -0.0472 S32: 0.0002 S33: 0.3074 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN C OR CHAIN D REMARK 3 ORIGIN FOR THE GROUP (A): -28.5737 0.1824 -22.8623 REMARK 3 T TENSOR REMARK 3 T11: 0.0717 T22: 0.0518 REMARK 3 T33: 0.0923 T12: -0.0548 REMARK 3 T13: 0.0484 T23: 0.0361 REMARK 3 L TENSOR REMARK 3 L11: 0.2115 L22: 0.2984 REMARK 3 L33: 0.5922 L12: 0.0640 REMARK 3 L13: -0.0655 L23: -0.0218 REMARK 3 S TENSOR REMARK 3 S11: -0.0730 S12: -0.1500 S13: -0.0138 REMARK 3 S21: 0.1546 S22: -0.1930 S23: 0.0473 REMARK 3 S31: -0.0601 S32: 0.1014 S33: -0.3959 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4YF5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-FEB-15. REMARK 100 THE DEPOSITION ID IS D_1000207362. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-JUN-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.95375 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 81481 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 24.600 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 13.70 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.07400 REMARK 200 FOR THE DATA SET : 7.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.10 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.9 REMARK 200 DATA REDUNDANCY IN SHELL : 12.70 REMARK 200 R MERGE FOR SHELL (I) : 0.45900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: 1YLK REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.08 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.05 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 15% PEG 400, 0.1 M NAH2PO4/NA-CITRATE, REMARK 280 10 MM POLYCARPINE, PH 5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: F 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X,Y+1/2,Z+1/2 REMARK 290 6555 -X,-Y+1/2,Z+1/2 REMARK 290 7555 -X,Y+1/2,-Z+1/2 REMARK 290 8555 X,-Y+1/2,-Z+1/2 REMARK 290 9555 X+1/2,Y,Z+1/2 REMARK 290 10555 -X+1/2,-Y,Z+1/2 REMARK 290 11555 -X+1/2,Y,-Z+1/2 REMARK 290 12555 X+1/2,-Y,-Z+1/2 REMARK 290 13555 X+1/2,Y+1/2,Z REMARK 290 14555 -X+1/2,-Y+1/2,Z REMARK 290 15555 -X+1/2,Y+1/2,-Z REMARK 290 16555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 76.96600 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 79.54900 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 76.96600 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 79.54900 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 76.96600 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 79.54900 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 76.96600 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 79.54900 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 51.64450 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 79.54900 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 51.64450 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 79.54900 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 51.64450 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 79.54900 REMARK 290 SMTRY1 12 1.000000 0.000000 0.000000 51.64450 REMARK 290 SMTRY2 12 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 79.54900 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 51.64450 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 76.96600 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 14 -1.000000 0.000000 0.000000 51.64450 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 76.96600 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 15 -1.000000 0.000000 0.000000 51.64450 REMARK 290 SMTRY2 15 0.000000 1.000000 0.000000 76.96600 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 16 1.000000 0.000000 0.000000 51.64450 REMARK 290 SMTRY2 16 0.000000 -1.000000 0.000000 76.96600 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7800 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13070 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -94.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7790 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12970 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -94.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 302 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 322 LIES ON A SPECIAL POSITION. REMARK 375 HOH C 303 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -8 REMARK 465 ALA A -7 REMARK 465 HIS A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 SER A 0 REMARK 465 MET B -8 REMARK 465 ALA B -7 REMARK 465 HIS B -6 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 HIS B -3 REMARK 465 HIS B -2 REMARK 465 HIS B -1 REMARK 465 SER B 0 REMARK 465 MET C -8 REMARK 465 ALA C -7 REMARK 465 HIS C -6 REMARK 465 HIS C -5 REMARK 465 HIS C -4 REMARK 465 HIS C -3 REMARK 465 HIS C -2 REMARK 465 HIS C -1 REMARK 465 SER C 0 REMARK 465 MET D -8 REMARK 465 ALA D -7 REMARK 465 HIS D -6 REMARK 465 HIS D -5 REMARK 465 HIS D -4 REMARK 465 HIS D -3 REMARK 465 HIS D -2 REMARK 465 HIS D -1 REMARK 465 SER D 0 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NE2 HIS D 88 O HOH D 250 1.52 REMARK 500 O HOH B 225 O HOH B 226 2.13 REMARK 500 O HOH D 251 O HOH D 252 2.15 REMARK 500 OD2 ASP B 37 O HOH B 264 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 37 131.74 -36.75 REMARK 500 HIS A 87 -169.86 -104.41 REMARK 500 LYS A 142 20.16 -78.84 REMARK 500 ASP B 37 129.96 -33.67 REMARK 500 ASP B 90 71.61 55.25 REMARK 500 ASP C 37 128.76 -37.10 REMARK 500 HIS D 87 -175.29 -69.72 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 200 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 88 NE2 REMARK 620 2 CYS A 91 SG 84.3 REMARK 620 3 HOH A 323 O 140.6 126.8 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C 200 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS C 88 NE2 REMARK 620 2 CYS C 91 SG 91.1 REMARK 620 3 HOH C 326 O 136.8 125.6 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 200 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN C 200 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL C 201 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4YF4 RELATED DB: PDB REMARK 900 RELATED ID: 4YF6 RELATED DB: PDB DBREF 4YF5 A 2 163 UNP P9WPJ6 MTCA1_MYCTO 2 163 DBREF 4YF5 B 2 163 UNP P9WPJ6 MTCA1_MYCTO 2 163 DBREF 4YF5 C 2 163 UNP P9WPJ6 MTCA1_MYCTO 2 163 DBREF 4YF5 D 2 163 UNP P9WPJ6 MTCA1_MYCTO 2 163 SEQADV 4YF5 MET A -8 UNP P9WPJ6 INITIATING METHIONINE SEQADV 4YF5 ALA A -7 UNP P9WPJ6 EXPRESSION TAG SEQADV 4YF5 HIS A -6 UNP P9WPJ6 EXPRESSION TAG SEQADV 4YF5 HIS A -5 UNP P9WPJ6 EXPRESSION TAG SEQADV 4YF5 HIS A -4 UNP P9WPJ6 EXPRESSION TAG SEQADV 4YF5 HIS A -3 UNP P9WPJ6 EXPRESSION TAG SEQADV 4YF5 HIS A -2 UNP P9WPJ6 EXPRESSION TAG SEQADV 4YF5 HIS A -1 UNP P9WPJ6 EXPRESSION TAG SEQADV 4YF5 SER A 0 UNP P9WPJ6 EXPRESSION TAG SEQADV 4YF5 GLY A 1 UNP P9WPJ6 EXPRESSION TAG SEQADV 4YF5 MET B -8 UNP P9WPJ6 INITIATING METHIONINE SEQADV 4YF5 ALA B -7 UNP P9WPJ6 EXPRESSION TAG SEQADV 4YF5 HIS B -6 UNP P9WPJ6 EXPRESSION TAG SEQADV 4YF5 HIS B -5 UNP P9WPJ6 EXPRESSION TAG SEQADV 4YF5 HIS B -4 UNP P9WPJ6 EXPRESSION TAG SEQADV 4YF5 HIS B -3 UNP P9WPJ6 EXPRESSION TAG SEQADV 4YF5 HIS B -2 UNP P9WPJ6 EXPRESSION TAG SEQADV 4YF5 HIS B -1 UNP P9WPJ6 EXPRESSION TAG SEQADV 4YF5 SER B 0 UNP P9WPJ6 EXPRESSION TAG SEQADV 4YF5 GLY B 1 UNP P9WPJ6 EXPRESSION TAG SEQADV 4YF5 MET C -8 UNP P9WPJ6 INITIATING METHIONINE SEQADV 4YF5 ALA C -7 UNP P9WPJ6 EXPRESSION TAG SEQADV 4YF5 HIS C -6 UNP P9WPJ6 EXPRESSION TAG SEQADV 4YF5 HIS C -5 UNP P9WPJ6 EXPRESSION TAG SEQADV 4YF5 HIS C -4 UNP P9WPJ6 EXPRESSION TAG SEQADV 4YF5 HIS C -3 UNP P9WPJ6 EXPRESSION TAG SEQADV 4YF5 HIS C -2 UNP P9WPJ6 EXPRESSION TAG SEQADV 4YF5 HIS C -1 UNP P9WPJ6 EXPRESSION TAG SEQADV 4YF5 SER C 0 UNP P9WPJ6 EXPRESSION TAG SEQADV 4YF5 GLY C 1 UNP P9WPJ6 EXPRESSION TAG SEQADV 4YF5 MET D -8 UNP P9WPJ6 INITIATING METHIONINE SEQADV 4YF5 ALA D -7 UNP P9WPJ6 EXPRESSION TAG SEQADV 4YF5 HIS D -6 UNP P9WPJ6 EXPRESSION TAG SEQADV 4YF5 HIS D -5 UNP P9WPJ6 EXPRESSION TAG SEQADV 4YF5 HIS D -4 UNP P9WPJ6 EXPRESSION TAG SEQADV 4YF5 HIS D -3 UNP P9WPJ6 EXPRESSION TAG SEQADV 4YF5 HIS D -2 UNP P9WPJ6 EXPRESSION TAG SEQADV 4YF5 HIS D -1 UNP P9WPJ6 EXPRESSION TAG SEQADV 4YF5 SER D 0 UNP P9WPJ6 EXPRESSION TAG SEQADV 4YF5 GLY D 1 UNP P9WPJ6 EXPRESSION TAG SEQRES 1 A 172 MET ALA HIS HIS HIS HIS HIS HIS SER GLY THR VAL THR SEQRES 2 A 172 ASP ASP TYR LEU ALA ASN ASN VAL ASP TYR ALA SER GLY SEQRES 3 A 172 PHE LYS GLY PRO LEU PRO MET PRO PRO SER LYS HIS ILE SEQRES 4 A 172 ALA ILE VAL ALA CYS MET ASP ALA ARG LEU ASP VAL TYR SEQRES 5 A 172 ARG MET LEU GLY ILE LYS GLU GLY GLU ALA HIS VAL ILE SEQRES 6 A 172 ARG ASN ALA GLY CYS VAL VAL THR ASP ASP VAL ILE ARG SEQRES 7 A 172 SER LEU ALA ILE SER GLN ARG LEU LEU GLY THR ARG GLU SEQRES 8 A 172 ILE ILE LEU LEU HIS HIS THR ASP CYS GLY MET LEU THR SEQRES 9 A 172 PHE THR ASP ASP ASP PHE LYS ARG ALA ILE GLN ASP GLU SEQRES 10 A 172 THR GLY ILE ARG PRO THR TRP SER PRO GLU SER TYR PRO SEQRES 11 A 172 ASP ALA VAL GLU ASP VAL ARG GLN SER LEU ARG ARG ILE SEQRES 12 A 172 GLU VAL ASN PRO PHE VAL THR LYS HIS THR SER LEU ARG SEQRES 13 A 172 GLY PHE VAL PHE ASP VAL ALA THR GLY LYS LEU ASN GLU SEQRES 14 A 172 VAL THR PRO SEQRES 1 B 172 MET ALA HIS HIS HIS HIS HIS HIS SER GLY THR VAL THR SEQRES 2 B 172 ASP ASP TYR LEU ALA ASN ASN VAL ASP TYR ALA SER GLY SEQRES 3 B 172 PHE LYS GLY PRO LEU PRO MET PRO PRO SER LYS HIS ILE SEQRES 4 B 172 ALA ILE VAL ALA CYS MET ASP ALA ARG LEU ASP VAL TYR SEQRES 5 B 172 ARG MET LEU GLY ILE LYS GLU GLY GLU ALA HIS VAL ILE SEQRES 6 B 172 ARG ASN ALA GLY CYS VAL VAL THR ASP ASP VAL ILE ARG SEQRES 7 B 172 SER LEU ALA ILE SER GLN ARG LEU LEU GLY THR ARG GLU SEQRES 8 B 172 ILE ILE LEU LEU HIS HIS THR ASP CYS GLY MET LEU THR SEQRES 9 B 172 PHE THR ASP ASP ASP PHE LYS ARG ALA ILE GLN ASP GLU SEQRES 10 B 172 THR GLY ILE ARG PRO THR TRP SER PRO GLU SER TYR PRO SEQRES 11 B 172 ASP ALA VAL GLU ASP VAL ARG GLN SER LEU ARG ARG ILE SEQRES 12 B 172 GLU VAL ASN PRO PHE VAL THR LYS HIS THR SER LEU ARG SEQRES 13 B 172 GLY PHE VAL PHE ASP VAL ALA THR GLY LYS LEU ASN GLU SEQRES 14 B 172 VAL THR PRO SEQRES 1 C 172 MET ALA HIS HIS HIS HIS HIS HIS SER GLY THR VAL THR SEQRES 2 C 172 ASP ASP TYR LEU ALA ASN ASN VAL ASP TYR ALA SER GLY SEQRES 3 C 172 PHE LYS GLY PRO LEU PRO MET PRO PRO SER LYS HIS ILE SEQRES 4 C 172 ALA ILE VAL ALA CYS MET ASP ALA ARG LEU ASP VAL TYR SEQRES 5 C 172 ARG MET LEU GLY ILE LYS GLU GLY GLU ALA HIS VAL ILE SEQRES 6 C 172 ARG ASN ALA GLY CYS VAL VAL THR ASP ASP VAL ILE ARG SEQRES 7 C 172 SER LEU ALA ILE SER GLN ARG LEU LEU GLY THR ARG GLU SEQRES 8 C 172 ILE ILE LEU LEU HIS HIS THR ASP CYS GLY MET LEU THR SEQRES 9 C 172 PHE THR ASP ASP ASP PHE LYS ARG ALA ILE GLN ASP GLU SEQRES 10 C 172 THR GLY ILE ARG PRO THR TRP SER PRO GLU SER TYR PRO SEQRES 11 C 172 ASP ALA VAL GLU ASP VAL ARG GLN SER LEU ARG ARG ILE SEQRES 12 C 172 GLU VAL ASN PRO PHE VAL THR LYS HIS THR SER LEU ARG SEQRES 13 C 172 GLY PHE VAL PHE ASP VAL ALA THR GLY LYS LEU ASN GLU SEQRES 14 C 172 VAL THR PRO SEQRES 1 D 172 MET ALA HIS HIS HIS HIS HIS HIS SER GLY THR VAL THR SEQRES 2 D 172 ASP ASP TYR LEU ALA ASN ASN VAL ASP TYR ALA SER GLY SEQRES 3 D 172 PHE LYS GLY PRO LEU PRO MET PRO PRO SER LYS HIS ILE SEQRES 4 D 172 ALA ILE VAL ALA CYS MET ASP ALA ARG LEU ASP VAL TYR SEQRES 5 D 172 ARG MET LEU GLY ILE LYS GLU GLY GLU ALA HIS VAL ILE SEQRES 6 D 172 ARG ASN ALA GLY CYS VAL VAL THR ASP ASP VAL ILE ARG SEQRES 7 D 172 SER LEU ALA ILE SER GLN ARG LEU LEU GLY THR ARG GLU SEQRES 8 D 172 ILE ILE LEU LEU HIS HIS THR ASP CYS GLY MET LEU THR SEQRES 9 D 172 PHE THR ASP ASP ASP PHE LYS ARG ALA ILE GLN ASP GLU SEQRES 10 D 172 THR GLY ILE ARG PRO THR TRP SER PRO GLU SER TYR PRO SEQRES 11 D 172 ASP ALA VAL GLU ASP VAL ARG GLN SER LEU ARG ARG ILE SEQRES 12 D 172 GLU VAL ASN PRO PHE VAL THR LYS HIS THR SER LEU ARG SEQRES 13 D 172 GLY PHE VAL PHE ASP VAL ALA THR GLY LYS LEU ASN GLU SEQRES 14 D 172 VAL THR PRO HET ZN A 200 1 HET CL A 201 1 HET ZN C 200 1 HET CL C 201 1 HETNAM ZN ZINC ION HETNAM CL CHLORIDE ION FORMUL 5 ZN 2(ZN 2+) FORMUL 6 CL 2(CL 1-) FORMUL 9 HOH *249(H2 O) HELIX 1 AA1 THR A 2 GLY A 17 1 16 HELIX 2 AA2 ASP A 41 GLY A 47 1 7 HELIX 3 AA3 ALA A 59 VAL A 62 5 4 HELIX 4 AA4 THR A 64 GLY A 79 1 16 HELIX 5 AA5 CYS A 91 THR A 95 5 5 HELIX 6 AA6 THR A 97 GLY A 110 1 14 HELIX 7 AA7 ASP A 122 VAL A 136 1 15 HELIX 8 AA8 THR B 2 PHE B 18 1 17 HELIX 9 AA9 ASP B 41 LEU B 46 1 6 HELIX 10 AB1 ALA B 59 VAL B 62 5 4 HELIX 11 AB2 THR B 64 LEU B 77 1 14 HELIX 12 AB3 THR B 97 GLY B 110 1 14 HELIX 13 AB4 ASP B 122 ASN B 137 1 16 HELIX 14 AB5 THR C 2 GLY C 17 1 16 HELIX 15 AB6 ASP C 41 GLY C 47 1 7 HELIX 16 AB7 ALA C 59 VAL C 62 5 4 HELIX 17 AB8 THR C 64 GLY C 79 1 16 HELIX 18 AB9 CYS C 91 PHE C 96 5 6 HELIX 19 AC1 THR C 97 GLY C 110 1 14 HELIX 20 AC2 ASP C 122 VAL C 136 1 15 HELIX 21 AC3 THR D 2 GLY D 17 1 16 HELIX 22 AC4 ASP D 41 LEU D 46 1 6 HELIX 23 AC5 THR D 64 GLY D 79 1 16 HELIX 24 AC6 CYS D 91 THR D 95 5 5 HELIX 25 AC7 THR D 97 GLY D 110 1 14 HELIX 26 AC8 ASP D 122 ASN D 137 1 16 SHEET 1 AA1 5 ALA A 53 ASN A 58 0 SHEET 2 AA1 5 ILE A 30 CYS A 35 1 N ILE A 32 O ILE A 56 SHEET 3 AA1 5 GLU A 82 HIS A 88 1 O LEU A 86 N VAL A 33 SHEET 4 AA1 5 SER A 145 PHE A 151 1 O PHE A 149 N HIS A 87 SHEET 5 AA1 5 LEU A 158 VAL A 161 -1 O VAL A 161 N GLY A 148 SHEET 1 AA2 5 ALA B 53 ASN B 58 0 SHEET 2 AA2 5 ILE B 30 CYS B 35 1 N ILE B 32 O ILE B 56 SHEET 3 AA2 5 GLU B 82 HIS B 88 1 O GLU B 82 N ALA B 31 SHEET 4 AA2 5 SER B 145 PHE B 151 1 O ARG B 147 N LEU B 85 SHEET 5 AA2 5 LEU B 158 VAL B 161 -1 O VAL B 161 N GLY B 148 SHEET 1 AA3 5 ALA C 53 ASN C 58 0 SHEET 2 AA3 5 ILE C 30 CYS C 35 1 N ILE C 32 O ILE C 56 SHEET 3 AA3 5 GLU C 82 HIS C 88 1 O LEU C 86 N VAL C 33 SHEET 4 AA3 5 SER C 145 PHE C 151 1 O PHE C 151 N HIS C 87 SHEET 5 AA3 5 LEU C 158 GLU C 160 -1 O ASN C 159 N VAL C 150 SHEET 1 AA4 5 ALA D 53 ASN D 58 0 SHEET 2 AA4 5 ILE D 30 CYS D 35 1 N ALA D 34 O ILE D 56 SHEET 3 AA4 5 GLU D 82 HIS D 88 1 O ILE D 84 N VAL D 33 SHEET 4 AA4 5 SER D 145 PHE D 151 1 O SER D 145 N ILE D 83 SHEET 5 AA4 5 LEU D 158 GLU D 160 -1 O ASN D 159 N VAL D 150 SSBOND 1 CYS A 35 CYS A 61 1555 1555 2.02 SSBOND 2 CYS B 35 CYS B 61 1555 1555 2.03 SSBOND 3 CYS C 35 CYS C 61 1555 1555 2.02 SSBOND 4 CYS D 35 CYS D 61 1555 1555 2.02 LINK NE2 HIS A 88 ZN ZN A 200 1555 1555 1.95 LINK SG CYS A 91 ZN ZN A 200 1555 1555 2.21 LINK ZN ZN A 200 O HOH A 323 1555 1555 2.34 LINK NE2 HIS C 88 ZN ZN C 200 1555 1555 1.97 LINK SG CYS C 91 ZN ZN C 200 1555 1555 2.31 LINK ZN ZN C 200 O HOH C 326 1555 1555 2.39 CISPEP 1 GLY A 20 PRO A 21 0 4.95 CISPEP 2 GLY B 20 PRO B 21 0 3.74 CISPEP 3 GLY C 20 PRO C 21 0 3.91 CISPEP 4 GLY D 20 PRO D 21 0 6.22 SITE 1 AC1 4 HIS A 88 CYS A 91 HOH A 323 HOH A 351 SITE 1 AC2 2 ARG A 57 ARG B 57 SITE 1 AC3 3 HIS C 88 CYS C 91 HOH C 326 SITE 1 AC4 2 ARG C 57 ARG D 57 CRYST1 103.289 153.932 159.098 90.00 90.00 90.00 F 2 2 2 64 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009682 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006496 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006285 0.00000