HEADER DE NOVO PROTEIN 25-FEB-15 4YFO TITLE BETA1_EX1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA1_EX1; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 3 ORGANISM_TAXID: 32630; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI KRX; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 1452720 KEYWDS SYNTHETIC PROTEIN, SOLENOID, DE NOVO PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.W.MURRAY,J.T.MACDONALD REVDAT 3 30-AUG-17 4YFO 1 REMARK REVDAT 2 12-OCT-16 4YFO 1 JRNL REVDAT 1 16-MAR-16 4YFO 0 JRNL AUTH J.T.MACDONALD,B.V.KABASAKAL,D.GODDING,S.KRAATZ,L.HENDERSON, JRNL AUTH 2 J.BARBER,P.S.FREEMONT,J.W.MURRAY JRNL TITL SYNTHETIC BETA-SOLENOID PROTEINS WITH THE FRAGMENT-FREE JRNL TITL 2 COMPUTATIONAL DESIGN OF A BETA-HAIRPIN EXTENSION. JRNL REF PROC.NATL.ACAD.SCI.USA V. 113 10346 2016 JRNL REFN ESSN 1091-6490 JRNL PMID 27573845 JRNL DOI 10.1073/PNAS.1525308113 REMARK 2 REMARK 2 RESOLUTION. 3.39 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0107 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.39 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.68 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 96.7 REMARK 3 NUMBER OF REFLECTIONS : 9477 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.197 REMARK 3 R VALUE (WORKING SET) : 0.196 REMARK 3 FREE R VALUE : 0.233 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 478 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.35 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.44 REMARK 3 REFLECTION IN BIN (WORKING SET) : 698 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.72 REMARK 3 BIN R VALUE (WORKING SET) : 0.3660 REMARK 3 BIN FREE R VALUE SET COUNT : 32 REMARK 3 BIN FREE R VALUE : 0.3000 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1702 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 113.2 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 5.58000 REMARK 3 B22 (A**2) : 5.58000 REMARK 3 B33 (A**2) : -18.11000 REMARK 3 B12 (A**2) : 2.79000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.538 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.341 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.222 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 34.523 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.951 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.924 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1716 ; 0.022 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 1630 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2330 ; 2.522 ; 1.947 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3703 ; 1.243 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 232 ; 6.797 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 90 ;37.380 ;25.889 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 267 ;20.712 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;19.122 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 273 ; 0.118 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2101 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 403 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 931 ; 4.054 ; 6.978 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 930 ; 4.007 ; 6.981 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1162 ; 6.257 ;10.469 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1163 ; 6.261 ;10.468 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 785 ; 6.204 ; 7.724 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 786 ; 6.200 ; 7.723 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1169 ; 9.503 ;11.330 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 7660 ;12.693 ;68.142 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 7661 ;12.701 ;68.141 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 21 A 27 REMARK 3 ORIGIN FOR THE GROUP (A): -43.8790 8.1350 8.1120 REMARK 3 T TENSOR REMARK 3 T11: 1.5988 T22: 0.9076 REMARK 3 T33: 0.4850 T12: 0.0605 REMARK 3 T13: -0.0996 T23: 0.2905 REMARK 3 L TENSOR REMARK 3 L11: 18.1124 L22: 0.1984 REMARK 3 L33: 8.3650 L12: -1.8815 REMARK 3 L13: -12.3077 L23: 1.2783 REMARK 3 S TENSOR REMARK 3 S11: 0.1262 S12: -1.1854 S13: 0.2399 REMARK 3 S21: 0.0039 S22: 0.0669 S23: -0.0352 REMARK 3 S31: -0.1285 S32: 0.7923 S33: -0.1931 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 28 A 34 REMARK 3 ORIGIN FOR THE GROUP (A): -51.8870 6.9750 8.5740 REMARK 3 T TENSOR REMARK 3 T11: 1.9473 T22: 1.0753 REMARK 3 T33: 0.7940 T12: 0.1501 REMARK 3 T13: -0.3596 T23: -0.0590 REMARK 3 L TENSOR REMARK 3 L11: 28.9422 L22: 16.7062 REMARK 3 L33: 6.2846 L12: 21.9634 REMARK 3 L13: -13.4772 L23: -10.2149 REMARK 3 S TENSOR REMARK 3 S11: 0.9134 S12: -1.2449 S13: -0.4505 REMARK 3 S21: 0.9224 S22: -1.0306 S23: -0.4373 REMARK 3 S31: -0.3958 S32: 0.5579 S33: 0.1172 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 35 A 66 REMARK 3 ORIGIN FOR THE GROUP (A): -44.6560 12.7780 0.0990 REMARK 3 T TENSOR REMARK 3 T11: 0.9700 T22: 0.4112 REMARK 3 T33: 0.1691 T12: 0.0357 REMARK 3 T13: 0.0039 T23: 0.1761 REMARK 3 L TENSOR REMARK 3 L11: 4.1234 L22: 3.7064 REMARK 3 L33: 13.4766 L12: -0.5082 REMARK 3 L13: 0.4898 L23: -1.1109 REMARK 3 S TENSOR REMARK 3 S11: 0.1111 S12: -0.2911 S13: 0.2175 REMARK 3 S21: 1.1310 S22: -0.4997 S23: -0.2616 REMARK 3 S31: -0.5587 S32: 0.6607 S33: 0.3887 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 67 A 73 REMARK 3 ORIGIN FOR THE GROUP (A): -46.3410 4.4850 -6.8220 REMARK 3 T TENSOR REMARK 3 T11: 0.7734 T22: 0.4045 REMARK 3 T33: 0.0643 T12: 0.0378 REMARK 3 T13: 0.1673 T23: 0.0892 REMARK 3 L TENSOR REMARK 3 L11: 46.6116 L22: 11.8697 REMARK 3 L33: 15.6123 L12: -4.0066 REMARK 3 L13: 0.4289 L23: -10.3424 REMARK 3 S TENSOR REMARK 3 S11: 0.7471 S12: -1.4579 S13: -0.5567 REMARK 3 S21: 0.3162 S22: -0.7112 S23: 0.2403 REMARK 3 S31: 1.1644 S32: -0.0320 S33: -0.0359 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 74 A 102 REMARK 3 ORIGIN FOR THE GROUP (A): -46.4230 14.1550 -9.2770 REMARK 3 T TENSOR REMARK 3 T11: 0.7024 T22: 0.1945 REMARK 3 T33: 0.0827 T12: 0.0778 REMARK 3 T13: 0.0825 T23: 0.0969 REMARK 3 L TENSOR REMARK 3 L11: 10.0546 L22: 14.5615 REMARK 3 L33: 14.2082 L12: 0.8980 REMARK 3 L13: 2.3992 L23: -4.0001 REMARK 3 S TENSOR REMARK 3 S11: -0.2821 S12: -0.2112 S13: 0.3244 REMARK 3 S21: 1.9780 S22: 0.0984 S23: 0.3415 REMARK 3 S31: -0.2057 S32: -0.4018 S33: 0.1837 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 103 A 108 REMARK 3 ORIGIN FOR THE GROUP (A): -37.5070 12.4540 -13.4950 REMARK 3 T TENSOR REMARK 3 T11: 0.6482 T22: 0.5744 REMARK 3 T33: 0.2398 T12: 0.2146 REMARK 3 T13: -0.1383 T23: 0.0237 REMARK 3 L TENSOR REMARK 3 L11: 22.7365 L22: 44.2062 REMARK 3 L33: 16.2007 L12: 17.1440 REMARK 3 L13: 7.7038 L23: 18.5804 REMARK 3 S TENSOR REMARK 3 S11: -0.8193 S12: -1.3613 S13: 0.5112 REMARK 3 S21: 0.6527 S22: -0.3619 S23: -0.3740 REMARK 3 S31: -0.0946 S32: 0.2781 S33: 1.1812 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 109 A 172 REMARK 3 ORIGIN FOR THE GROUP (A): -44.3150 13.7320 -22.2510 REMARK 3 T TENSOR REMARK 3 T11: 0.3669 T22: 0.1762 REMARK 3 T33: 0.1491 T12: 0.0996 REMARK 3 T13: 0.0560 T23: 0.1466 REMARK 3 L TENSOR REMARK 3 L11: 4.7447 L22: 8.0865 REMARK 3 L33: 12.8165 L12: 0.7871 REMARK 3 L13: 0.0823 L23: -0.8478 REMARK 3 S TENSOR REMARK 3 S11: -0.1317 S12: -0.2963 S13: 0.0674 REMARK 3 S21: 0.5689 S22: -0.1639 S23: -0.2088 REMARK 3 S31: 0.5372 S32: 0.4234 S33: 0.2956 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 173 A 204 REMARK 3 ORIGIN FOR THE GROUP (A): -45.2530 16.8600 -33.6880 REMARK 3 T TENSOR REMARK 3 T11: 0.1650 T22: 0.0983 REMARK 3 T33: 0.0976 T12: 0.0257 REMARK 3 T13: 0.0396 T23: 0.0923 REMARK 3 L TENSOR REMARK 3 L11: 12.7990 L22: 4.6724 REMARK 3 L33: 11.6477 L12: -0.5631 REMARK 3 L13: 2.2823 L23: -1.8879 REMARK 3 S TENSOR REMARK 3 S11: -0.2967 S12: -0.1619 S13: 0.0995 REMARK 3 S21: 0.4627 S22: 0.1363 S23: 0.0756 REMARK 3 S31: 0.2324 S32: -0.0008 S33: 0.1604 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 205 A 216 REMARK 3 ORIGIN FOR THE GROUP (A): -43.2930 11.9100 -38.9670 REMARK 3 T TENSOR REMARK 3 T11: 0.4213 T22: 0.2173 REMARK 3 T33: 0.1524 T12: 0.1204 REMARK 3 T13: 0.0716 T23: 0.0981 REMARK 3 L TENSOR REMARK 3 L11: 30.3730 L22: 13.3765 REMARK 3 L33: 8.7174 L12: -2.6780 REMARK 3 L13: 1.8840 L23: -0.7288 REMARK 3 S TENSOR REMARK 3 S11: 0.2951 S12: -0.9955 S13: -1.5451 REMARK 3 S21: -0.0598 S22: -0.0763 S23: -0.4694 REMARK 3 S31: 1.1023 S32: 0.4764 S33: -0.2188 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 217 A 253 REMARK 3 ORIGIN FOR THE GROUP (A): -44.7910 19.9290 -47.3640 REMARK 3 T TENSOR REMARK 3 T11: 0.1229 T22: 0.1332 REMARK 3 T33: 0.2068 T12: 0.0584 REMARK 3 T13: 0.0754 T23: 0.0281 REMARK 3 L TENSOR REMARK 3 L11: 1.5773 L22: 2.5123 REMARK 3 L33: 14.0208 L12: 1.4411 REMARK 3 L13: -1.0812 L23: -3.1912 REMARK 3 S TENSOR REMARK 3 S11: -0.0697 S12: -0.0212 S13: -0.0955 REMARK 3 S21: -0.3040 S22: -0.1094 S23: -0.1315 REMARK 3 S31: -0.0617 S32: 0.4094 S33: 0.1791 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4YFO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 25-FEB-15. REMARK 100 THE DEPOSITION ID IS D_1000207382. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-MAY-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.92000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : XIA2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 9607 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.390 REMARK 200 RESOLUTION RANGE LOW (A) : 107.830 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.8 REMARK 200 DATA REDUNDANCY : 9.900 REMARK 200 R MERGE (I) : 0.12900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.39 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.48 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.9 REMARK 200 DATA REDUNDANCY IN SHELL : 9.10 REMARK 200 R MERGE FOR SHELL (I) : 0.58500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 80.81 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 6.41 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 90 MM BIS TRIS PH 5.5, 2.7 M SODIUM REMARK 280 CHLORIDE, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 52.59000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 30.36285 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 107.83333 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 52.59000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 30.36285 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 107.83333 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 52.59000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 30.36285 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 107.83333 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 52.59000 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 30.36285 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 107.83333 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 52.59000 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 30.36285 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 107.83333 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 52.59000 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 30.36285 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 107.83333 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 60.72570 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 215.66667 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 60.72570 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 215.66667 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 60.72570 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 215.66667 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 60.72570 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 215.66667 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 60.72570 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 215.66667 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 60.72570 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 215.66667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1340 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18200 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 -52.59000 REMARK 350 BIOMT2 2 -0.866025 0.500000 0.000000 -30.36285 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -107.83333 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 SER A 3 REMARK 465 SER A 4 REMARK 465 HIS A 5 REMARK 465 HIS A 6 REMARK 465 HIS A 7 REMARK 465 HIS A 8 REMARK 465 HIS A 9 REMARK 465 HIS A 10 REMARK 465 SER A 11 REMARK 465 SER A 12 REMARK 465 GLY A 13 REMARK 465 LEU A 14 REMARK 465 VAL A 15 REMARK 465 PRO A 16 REMARK 465 ARG A 17 REMARK 465 GLY A 18 REMARK 465 SER A 19 REMARK 465 HIS A 20 REMARK 465 ALA A 254 REMARK 465 GLY A 255 REMARK 465 GLY A 256 REMARK 465 SER A 257 REMARK 465 GLY A 258 REMARK 465 CYS A 259 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 35 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 ARG A 35 NE - CZ - NH2 ANGL. DEV. = -3.5 DEGREES REMARK 500 ASP A 153 CB - CG - OD2 ANGL. DEV. = -6.5 DEGREES REMARK 500 MET A 191 CG - SD - CE ANGL. DEV. = 13.4 DEGREES REMARK 500 ARG A 194 CG - CD - NE ANGL. DEV. = -13.8 DEGREES REMARK 500 ASP A 214 CB - CG - OD1 ANGL. DEV. = 5.8 DEGREES REMARK 500 ASP A 214 CB - CG - OD2 ANGL. DEV. = -5.8 DEGREES REMARK 500 LEU A 226 CB - CG - CD1 ANGL. DEV. = -10.9 DEGREES REMARK 500 ARG A 236 NE - CZ - NH2 ANGL. DEV. = -5.3 DEGREES REMARK 500 LEU A 253 CB - CG - CD1 ANGL. DEV. = -14.8 DEGREES REMARK 500 LEU A 253 CB - CG - CD2 ANGL. DEV. = 16.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 49 -8.27 75.64 REMARK 500 HIS A 63 153.26 -49.81 REMARK 500 HIS A 64 37.98 24.43 REMARK 500 SER A 74 22.51 37.65 REMARK 500 ASN A 79 17.24 58.39 REMARK 500 ALA A 99 15.79 59.87 REMARK 500 ASN A 163 106.11 -40.76 REMARK 500 SER A 173 116.03 -37.95 REMARK 500 THR A 208 111.34 -26.94 REMARK 500 ASP A 214 4.66 52.31 REMARK 500 REMARK 500 REMARK: NULL DBREF 4YFO A 1 259 PDB 4YFO 4YFO 1 259 SEQRES 1 A 259 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 259 LEU VAL PRO ARG GLY SER HIS MET ASN VAL GLY GLU ILE SEQRES 3 A 259 LEU ARG HIS TYR ALA ALA GLY LYS ARG ASN PHE GLN HIS SEQRES 4 A 259 ILE ASN LEU GLN GLU ILE GLU LEU THR ASN ALA SER LEU SEQRES 5 A 259 THR GLY ALA ASP LEU SER TYR ALA ASN LEU HIS HIS ALA SEQRES 6 A 259 ASN LEU SER ARG ALA ASN LEU ARG SER ALA ASP LEU ARG SEQRES 7 A 259 ASN ALA ASN LEU SER HIS ALA ASN LEU SER GLY ALA ASN SEQRES 8 A 259 LEU GLU GLU ALA ASN LEU GLU ALA ALA ASN LEU ARG GLY SEQRES 9 A 259 ALA ASP LEU HIS GLU ALA ASN LEU SER GLY ALA ASP LEU SEQRES 10 A 259 GLN GLU ALA ASN LEU THR GLN ALA ASN LEU LYS ASP ALA SEQRES 11 A 259 ASN LEU SER ASP ALA ASN LEU GLU GLN ALA ASP LEU ALA SEQRES 12 A 259 GLY ALA ASP LEU GLN GLY ALA VAL LEU ASP GLY ALA ASN SEQRES 13 A 259 LEU HIS GLY ALA ASP LEU ASN GLY ALA ASP LEU LYS GLN SEQRES 14 A 259 ALA ASP LEU SER GLY ALA ASP LEU GLY GLY ALA ASN LEU SEQRES 15 A 259 ASN ASN ALA ASN LEU SER GLU ALA MET LEU THR ARG ALA SEQRES 16 A 259 ASN LEU GLU GLN ALA ASP LEU SER GLY ALA ARG THR THR SEQRES 17 A 259 GLY ALA ARG LEU ASP ASP ALA ASP LEU ARG GLY ALA THR SEQRES 18 A 259 VAL ASP PRO VAL LEU TRP ARG THR ALA SER LEU VAL GLY SEQRES 19 A 259 ALA ARG VAL ASP VAL ASP GLN ALA VAL ALA PHE ALA ALA SEQRES 20 A 259 ALA HIS GLY LEU CYS LEU ALA GLY GLY SER GLY CYS HELIX 1 AA1 ASN A 22 GLY A 33 1 12 HELIX 2 AA2 ASP A 223 ALA A 230 1 8 HELIX 3 AA3 ASP A 238 HIS A 249 1 12 SHEET 1 AA1 2 ASP A 201 LEU A 202 0 SHEET 2 AA1 2 THR A 221 VAL A 222 1 O THR A 221 N LEU A 202 CRYST1 105.180 105.180 323.500 90.00 90.00 120.00 H 3 2 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009508 0.005489 0.000000 0.00000 SCALE2 0.000000 0.010978 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003091 0.00000