HEADER HYDROLASE/IMMUNE SYSTEM 27-FEB-15 4YH7 TITLE CRYSTAL STRUCTURE OF PTPDELTA ECTODOMAIN IN COMPLEX WITH IL1RAPL1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE DELTA; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 21-854; COMPND 5 SYNONYM: R-PTP-DELTA; COMPND 6 EC: 3.1.3.48; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: INTERLEUKIN-1 RECEPTOR ACCESSORY PROTEIN-LIKE 1; COMPND 10 CHAIN: B; COMPND 11 FRAGMENT: UNP RESIDUES 19-352; COMPND 12 SYNONYM: IL1RAPL-1,X-LINKED INTERLEUKIN-1 RECEPTOR ACCESSORY PROTEIN- COMPND 13 LIKE 1; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: PTPRD; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 9 EXPRESSION_SYSTEM_CELL_LINE: FREESTYLE 293-F; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 12 ORGANISM_COMMON: MOUSE; SOURCE 13 ORGANISM_TAXID: 10090; SOURCE 14 GENE: IL1RAPL1; SOURCE 15 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 16 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 18 EXPRESSION_SYSTEM_CELL_LINE: FREESTYLE 293-F KEYWDS TRANS-SYNAPTIC COMPLEX, SYNAPSE ORGANIZER, HYDROLASE-IMMUNE SYSTEM KEYWDS 2 COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR A.YAMAGATA,S.FUKAI REVDAT 4 08-NOV-23 4YH7 1 HETSYN LINK REVDAT 3 29-JUL-20 4YH7 1 COMPND REMARK HETNAM LINK REVDAT 3 2 1 SITE ATOM REVDAT 2 05-FEB-20 4YH7 1 SOURCE REMARK REVDAT 1 06-MAY-15 4YH7 0 JRNL AUTH A.YAMAGATA,T.YOSHIDA,Y.SATO,S.GOTO-ITO,T.UEMURA,A.MAEDA, JRNL AUTH 2 T.SHIROSHIMA,S.IWASAWA-OKAMOTO,H.MORI,M.MISHINA,S.FUKAI JRNL TITL MECHANISMS OF SPLICING-DEPENDENT TRANS-SYNAPTIC ADHESION BY JRNL TITL 2 PTP DELTA-IL1RAPL1/IL-1RACP FOR SYNAPTIC DIFFERENTIATION. JRNL REF NAT COMMUN V. 6 6926 2015 JRNL REFN ESSN 2041-1723 JRNL PMID 25908590 JRNL DOI 10.1038/NCOMMS7926 REMARK 2 REMARK 2 RESOLUTION. 4.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.2_1309) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 4.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.09 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.430 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.4 REMARK 3 NUMBER OF REFLECTIONS : 17614 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.292 REMARK 3 R VALUE (WORKING SET) : 0.290 REMARK 3 FREE R VALUE : 0.325 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.090 REMARK 3 FREE R VALUE TEST SET COUNT : 896 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.0917 - 7.9756 0.99 2992 148 0.2821 0.3185 REMARK 3 2 7.9756 - 6.3392 0.99 2907 149 0.3152 0.3302 REMARK 3 3 6.3392 - 5.5405 0.97 2853 137 0.2676 0.3234 REMARK 3 4 5.5405 - 5.0350 0.97 2780 164 0.2791 0.3165 REMARK 3 5 5.0350 - 4.6748 0.93 2660 169 0.2937 0.3307 REMARK 3 6 4.6748 - 4.3996 0.87 2526 129 0.3324 0.3566 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.660 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 37.840 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 7414 REMARK 3 ANGLE : 1.575 10078 REMARK 3 CHIRALITY : 0.064 1141 REMARK 3 PLANARITY : 0.008 1297 REMARK 3 DIHEDRAL : 19.831 2810 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4YH7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 11-MAR-15. REMARK 100 THE DEPOSITION ID IS D_1000207456. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-JUN-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL41XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX225HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17618 REMARK 200 RESOLUTION RANGE HIGH (A) : 4.400 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.6 REMARK 200 DATA REDUNDANCY : 4.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.07200 REMARK 200 FOR THE DATA SET : 17.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 4.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 4.48 REMARK 200 COMPLETENESS FOR SHELL (%) : 86.0 REMARK 200 DATA REDUNDANCY IN SHELL : 2.20 REMARK 200 R MERGE FOR SHELL (I) : 0.42400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: HKL-2000 REMARK 200 STARTING MODEL: 4YFC, 2DJU, 2DLH REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 77.19 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 5.39 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 15% PEG4000, 0.1 M MES, PH 6.0, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 41 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 3555 -Y,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X,Z+3/4 REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X,-Y,Z REMARK 290 7555 -Y+1/2,X,Z+3/4 REMARK 290 8555 Y,-X+1/2,Z+1/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 143.14750 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 143.14750 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 35.09150 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 143.14750 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 17.54575 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 143.14750 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 52.63725 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 143.14750 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 143.14750 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 35.09150 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 -1.000000 0.000000 143.14750 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 52.63725 REMARK 290 SMTRY1 8 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 143.14750 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 17.54575 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5210 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 50150 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 14.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLN A 613 REMARK 465 SER A 614 REMARK 465 MET A 615 REMARK 465 PHE A 616 REMARK 465 ALA A 617 REMARK 465 LYS A 618 REMARK 465 ASN A 619 REMARK 465 PHE A 620 REMARK 465 HIS A 621 REMARK 465 VAL A 622 REMARK 465 LYS A 623 REMARK 465 ALA A 624 REMARK 465 VAL A 625 REMARK 465 MET A 626 REMARK 465 LYS A 627 REMARK 465 THR A 628 REMARK 465 SER A 629 REMARK 465 VAL A 630 REMARK 465 LEU A 631 REMARK 465 LEU A 632 REMARK 465 SER A 633 REMARK 465 TRP A 634 REMARK 465 GLU A 635 REMARK 465 ILE A 636 REMARK 465 PRO A 637 REMARK 465 GLU A 638 REMARK 465 ASN A 639 REMARK 465 TYR A 640 REMARK 465 ASN A 641 REMARK 465 SER A 642 REMARK 465 ALA A 643 REMARK 465 MET A 644 REMARK 465 PRO A 645 REMARK 465 PHE A 646 REMARK 465 LYS A 647 REMARK 465 ILE A 648 REMARK 465 LEU A 649 REMARK 465 TYR A 650 REMARK 465 ASP A 651 REMARK 465 ASP A 652 REMARK 465 GLY A 653 REMARK 465 LYS A 654 REMARK 465 MET A 655 REMARK 465 VAL A 656 REMARK 465 GLU A 657 REMARK 465 GLU A 658 REMARK 465 VAL A 659 REMARK 465 ASP A 660 REMARK 465 GLY A 661 REMARK 465 ARG A 662 REMARK 465 ALA A 663 REMARK 465 THR A 664 REMARK 465 GLN A 665 REMARK 465 LYS A 666 REMARK 465 LEU A 667 REMARK 465 ILE A 668 REMARK 465 VAL A 669 REMARK 465 ASN A 670 REMARK 465 LEU A 671 REMARK 465 LYS A 672 REMARK 465 PRO A 673 REMARK 465 GLU A 674 REMARK 465 LYS A 675 REMARK 465 SER A 676 REMARK 465 TYR A 677 REMARK 465 SER A 678 REMARK 465 PHE A 679 REMARK 465 VAL A 680 REMARK 465 LEU A 681 REMARK 465 THR A 682 REMARK 465 ASN A 683 REMARK 465 ARG A 684 REMARK 465 GLY A 685 REMARK 465 ASN A 686 REMARK 465 SER A 687 REMARK 465 ALA A 688 REMARK 465 GLY A 689 REMARK 465 GLY A 690 REMARK 465 LEU A 691 REMARK 465 GLN A 692 REMARK 465 HIS A 693 REMARK 465 ARG A 694 REMARK 465 VAL A 695 REMARK 465 THR A 696 REMARK 465 ALA A 697 REMARK 465 LYS A 698 REMARK 465 THR A 699 REMARK 465 ALA A 700 REMARK 465 PRO A 701 REMARK 465 ASP A 702 REMARK 465 VAL A 703 REMARK 465 LEU A 704 REMARK 465 ARG A 705 REMARK 465 THR A 706 REMARK 465 LYS A 707 REMARK 465 PRO A 708 REMARK 465 ALA A 709 REMARK 465 PHE A 710 REMARK 465 ILE A 711 REMARK 465 GLY A 712 REMARK 465 LYS A 713 REMARK 465 THR A 714 REMARK 465 ASN A 715 REMARK 465 LEU A 716 REMARK 465 ASP A 717 REMARK 465 GLY A 718 REMARK 465 MET A 719 REMARK 465 ILE A 720 REMARK 465 THR A 721 REMARK 465 VAL A 722 REMARK 465 GLN A 723 REMARK 465 LEU A 724 REMARK 465 PRO A 725 REMARK 465 ASP A 726 REMARK 465 VAL A 727 REMARK 465 PRO A 728 REMARK 465 ALA A 729 REMARK 465 ASN A 730 REMARK 465 GLU A 731 REMARK 465 ASN A 732 REMARK 465 ILE A 733 REMARK 465 LYS A 734 REMARK 465 GLY A 735 REMARK 465 TYR A 736 REMARK 465 TYR A 737 REMARK 465 ILE A 738 REMARK 465 ILE A 739 REMARK 465 ILE A 740 REMARK 465 VAL A 741 REMARK 465 PRO A 742 REMARK 465 LEU A 743 REMARK 465 LYS A 744 REMARK 465 LYS A 745 REMARK 465 SER A 746 REMARK 465 ARG A 747 REMARK 465 GLY A 748 REMARK 465 LYS A 749 REMARK 465 PHE A 750 REMARK 465 ILE A 751 REMARK 465 LYS A 752 REMARK 465 PRO A 753 REMARK 465 TRP A 754 REMARK 465 GLU A 755 REMARK 465 SER A 756 REMARK 465 PRO A 757 REMARK 465 ASP A 758 REMARK 465 GLU A 759 REMARK 465 MET A 760 REMARK 465 GLU A 761 REMARK 465 LEU A 762 REMARK 465 ASP A 763 REMARK 465 GLU A 764 REMARK 465 LEU A 765 REMARK 465 LEU A 766 REMARK 465 LYS A 767 REMARK 465 GLU A 768 REMARK 465 ILE A 769 REMARK 465 SER A 770 REMARK 465 ARG A 771 REMARK 465 LYS A 772 REMARK 465 ARG A 773 REMARK 465 ARG A 774 REMARK 465 SER A 775 REMARK 465 ILE A 776 REMARK 465 ARG A 777 REMARK 465 TYR A 778 REMARK 465 GLY A 779 REMARK 465 ARG A 780 REMARK 465 GLU A 781 REMARK 465 VAL A 782 REMARK 465 GLU A 783 REMARK 465 LEU A 784 REMARK 465 LYS A 785 REMARK 465 PRO A 786 REMARK 465 TYR A 787 REMARK 465 ILE A 788 REMARK 465 ALA A 789 REMARK 465 ALA A 790 REMARK 465 HIS A 791 REMARK 465 PHE A 792 REMARK 465 ASP A 793 REMARK 465 VAL A 794 REMARK 465 LEU A 795 REMARK 465 PRO A 796 REMARK 465 THR A 797 REMARK 465 GLU A 798 REMARK 465 PHE A 799 REMARK 465 THR A 800 REMARK 465 LEU A 801 REMARK 465 GLY A 802 REMARK 465 ASP A 803 REMARK 465 ASP A 804 REMARK 465 LYS A 805 REMARK 465 HIS A 806 REMARK 465 TYR A 807 REMARK 465 GLY A 808 REMARK 465 GLY A 809 REMARK 465 PHE A 810 REMARK 465 THR A 811 REMARK 465 ASN A 812 REMARK 465 LYS A 813 REMARK 465 GLN A 814 REMARK 465 LEU A 815 REMARK 465 GLN A 816 REMARK 465 SER A 817 REMARK 465 GLY A 818 REMARK 465 GLN A 819 REMARK 465 GLU A 820 REMARK 465 TYR A 821 REMARK 465 VAL A 822 REMARK 465 PHE A 823 REMARK 465 PHE A 824 REMARK 465 VAL A 825 REMARK 465 LEU A 826 REMARK 465 ALA A 827 REMARK 465 VAL A 828 REMARK 465 MET A 829 REMARK 465 ASP A 830 REMARK 465 HIS A 831 REMARK 465 ALA A 832 REMARK 465 GLU A 833 REMARK 465 SER A 834 REMARK 465 LYS A 835 REMARK 465 MET A 836 REMARK 465 TYR A 837 REMARK 465 ALA A 838 REMARK 465 THR A 839 REMARK 465 SER A 840 REMARK 465 PRO A 841 REMARK 465 TYR A 842 REMARK 465 SER A 843 REMARK 465 ASP A 844 REMARK 465 PRO A 845 REMARK 465 VAL A 846 REMARK 465 VAL A 847 REMARK 465 SER A 848 REMARK 465 MET A 849 REMARK 465 ASP A 850 REMARK 465 LEU A 851 REMARK 465 ASP A 852 REMARK 465 PRO A 853 REMARK 465 GLN A 854 REMARK 465 PRO A 855 REMARK 465 ILE A 856 REMARK 465 THR A 857 REMARK 465 ASP A 858 REMARK 465 GLU A 859 REMARK 465 GLU A 860 REMARK 465 GLU A 861 REMARK 465 LYS A 862 REMARK 465 HIS A 863 REMARK 465 HIS A 864 REMARK 465 HIS A 865 REMARK 465 HIS A 866 REMARK 465 HIS A 867 REMARK 465 HIS A 868 REMARK 465 ALA B 12 REMARK 465 GLN B 13 REMARK 465 PRO B 14 REMARK 465 ALA B 15 REMARK 465 ALA B 16 REMARK 465 ARG B 17 REMARK 465 ASP B 18 REMARK 465 LEU B 19 REMARK 465 LYS B 20 REMARK 465 VAL B 21 REMARK 465 VAL B 22 REMARK 465 THR B 23 REMARK 465 LYS B 24 REMARK 465 ARG B 25 REMARK 465 GLY B 26 REMARK 465 SER B 27 REMARK 465 ALA B 28 REMARK 465 ASP B 29 REMARK 465 GLY B 30 REMARK 465 LEU B 172 REMARK 465 PRO B 173 REMARK 465 THR B 174 REMARK 465 ARG B 175 REMARK 465 HIS B 359 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS B 353 CG CD CE NZ REMARK 470 HIS B 354 CG ND1 CD2 CE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH2 ARG A 98 OE2 GLU B 291 2.09 REMARK 500 O ARG A 124 NE2 GLN A 127 2.13 REMARK 500 NH2 ARG A 196 OD1 ASP B 37 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 357 C - N - CA ANGL. DEV. = 9.0 DEGREES REMARK 500 VAL A 358 CG1 - CB - CG2 ANGL. DEV. = -14.4 DEGREES REMARK 500 PRO A 414 C - N - CA ANGL. DEV. = -10.1 DEGREES REMARK 500 PRO A 448 C - N - CA ANGL. DEV. = 10.1 DEGREES REMARK 500 THR A 518 N - CA - C ANGL. DEV. = 16.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 39 151.60 -47.20 REMARK 500 LYS A 67 71.92 49.45 REMARK 500 LYS A 70 80.90 -41.50 REMARK 500 ASN A 73 135.19 -174.26 REMARK 500 SER A 85 -118.25 -66.71 REMARK 500 GLU A 100 98.87 -54.46 REMARK 500 ASN A 110 24.81 -72.68 REMARK 500 ASP A 126 -2.88 -54.32 REMARK 500 GLN A 127 38.35 -157.97 REMARK 500 PHE A 170 -19.59 84.48 REMARK 500 ASP A 174 110.77 55.79 REMARK 500 ASN A 178 1.33 38.52 REMARK 500 LEU A 278 55.35 -92.43 REMARK 500 ALA A 280 -65.35 -103.49 REMARK 500 ASN A 299 -74.88 -100.27 REMARK 500 ASP A 300 67.81 -116.35 REMARK 500 ARG A 302 -78.57 -108.76 REMARK 500 SER A 313 -163.07 -103.41 REMARK 500 ALA A 320 128.92 -175.05 REMARK 500 THR A 335 41.01 71.40 REMARK 500 PRO A 336 85.90 -66.29 REMARK 500 ASN A 404 -168.62 -124.12 REMARK 500 ASN A 405 2.98 -63.32 REMARK 500 LEU A 436 -89.62 -104.97 REMARK 500 TYR A 461 76.58 -104.07 REMARK 500 PRO A 466 41.82 -76.08 REMARK 500 MET A 474 154.94 150.58 REMARK 500 GLN A 482 1.90 47.03 REMARK 500 ASP A 513 11.35 169.76 REMARK 500 VAL A 516 142.05 -29.50 REMARK 500 GLN A 519 -123.26 -124.14 REMARK 500 GLN A 525 144.88 -37.84 REMARK 500 PRO A 546 -177.53 -69.42 REMARK 500 SER A 548 108.85 -46.66 REMARK 500 ASP A 560 103.14 -58.01 REMARK 500 GLN A 563 32.59 -91.71 REMARK 500 ASN A 585 51.92 37.44 REMARK 500 SER A 593 108.04 -162.19 REMARK 500 SER B 35 -166.58 57.70 REMARK 500 VAL B 45 101.79 -50.58 REMARK 500 TYR B 57 54.66 -101.82 REMARK 500 TYR B 59 -71.29 -61.83 REMARK 500 PRO B 88 62.02 -69.84 REMARK 500 ILE B 89 106.45 20.46 REMARK 500 ASP B 92 -152.15 -88.92 REMARK 500 SER B 94 -78.57 -90.04 REMARK 500 ARG B 95 -78.58 -72.46 REMARK 500 ASN B 122 -109.85 -79.07 REMARK 500 SER B 123 0.07 -155.66 REMARK 500 THR B 140 100.91 -37.69 REMARK 500 REMARK 500 THIS ENTRY HAS 72 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 PRO B 88 ILE B 89 148.87 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4YH6 RELATED DB: PDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 SEQUENCE OF THE CHAIN A WAS BASED ON ISOFORM 12 OF DATABASE UNP REMARK 999 Q64487 DBREF 4YH7 A 28 861 UNP Q64487 PTPRD_MOUSE 21 854 DBREF 4YH7 B 19 352 UNP P59823 IRPL1_MOUSE 19 352 SEQADV 4YH7 LYS A 862 UNP Q64487 EXPRESSION TAG SEQADV 4YH7 HIS A 863 UNP Q64487 EXPRESSION TAG SEQADV 4YH7 HIS A 864 UNP Q64487 EXPRESSION TAG SEQADV 4YH7 HIS A 865 UNP Q64487 EXPRESSION TAG SEQADV 4YH7 HIS A 866 UNP Q64487 EXPRESSION TAG SEQADV 4YH7 HIS A 867 UNP Q64487 EXPRESSION TAG SEQADV 4YH7 HIS A 868 UNP Q64487 EXPRESSION TAG SEQADV 4YH7 ALA B 12 UNP P59823 EXPRESSION TAG SEQADV 4YH7 GLN B 13 UNP P59823 EXPRESSION TAG SEQADV 4YH7 PRO B 14 UNP P59823 EXPRESSION TAG SEQADV 4YH7 ALA B 15 UNP P59823 EXPRESSION TAG SEQADV 4YH7 ALA B 16 UNP P59823 EXPRESSION TAG SEQADV 4YH7 ARG B 17 UNP P59823 EXPRESSION TAG SEQADV 4YH7 ASP B 18 UNP P59823 EXPRESSION TAG SEQADV 4YH7 LYS B 353 UNP P59823 EXPRESSION TAG SEQADV 4YH7 HIS B 354 UNP P59823 EXPRESSION TAG SEQADV 4YH7 HIS B 355 UNP P59823 EXPRESSION TAG SEQADV 4YH7 HIS B 356 UNP P59823 EXPRESSION TAG SEQADV 4YH7 HIS B 357 UNP P59823 EXPRESSION TAG SEQADV 4YH7 HIS B 358 UNP P59823 EXPRESSION TAG SEQADV 4YH7 HIS B 359 UNP P59823 EXPRESSION TAG SEQRES 1 A 841 GLU THR PRO PRO ARG PHE THR ARG THR PRO VAL ASP GLN SEQRES 2 A 841 THR GLY VAL SER GLY GLY VAL ALA SER PHE ILE CYS GLN SEQRES 3 A 841 ALA THR GLY ASP PRO ARG PRO LYS ILE VAL TRP ASN LYS SEQRES 4 A 841 LYS GLY LYS LYS VAL SER ASN GLN ARG PHE GLU VAL ILE SEQRES 5 A 841 GLU PHE ASP ASP GLY SER GLY SER VAL LEU ARG ILE GLN SEQRES 6 A 841 PRO LEU ARG THR PRO ARG ASP GLU ALA ILE TYR GLU CYS SEQRES 7 A 841 VAL ALA SER ASN ASN VAL GLY GLU ILE SER VAL SER THR SEQRES 8 A 841 ARG LEU THR VAL LEU ARG GLU ASP GLN ILE PRO ARG GLY SEQRES 9 A 841 PHE PRO THR ILE ASP MET GLY PRO GLN LEU LYS VAL VAL SEQRES 10 A 841 GLU ARG THR ARG THR ALA THR MET LEU CYS ALA ALA SER SEQRES 11 A 841 GLY ASN PRO ASP PRO GLU ILE THR TRP PHE LYS ASP PHE SEQRES 12 A 841 LEU PRO VAL ASP THR SER ASN ASN ASN GLY ARG ILE LYS SEQRES 13 A 841 GLN LEU ARG SER GLU SER ILE GLY GLY THR PRO ILE ARG SEQRES 14 A 841 GLY ALA LEU GLN ILE GLU GLN SER GLU GLU SER ASP GLN SEQRES 15 A 841 GLY LYS TYR GLU CYS VAL ALA THR ASN SER ALA GLY THR SEQRES 16 A 841 ARG TYR SER ALA PRO ALA ASN LEU TYR VAL ARG GLU LEU SEQRES 17 A 841 ARG GLU VAL ARG ARG VAL PRO PRO ARG PHE SER ILE PRO SEQRES 18 A 841 PRO THR ASN HIS GLU ILE MET PRO GLY GLY SER VAL ASN SEQRES 19 A 841 ILE THR CYS VAL ALA VAL GLY SER PRO MET PRO TYR VAL SEQRES 20 A 841 LYS TRP MET LEU GLY ALA GLU ASP LEU THR PRO GLU ASP SEQRES 21 A 841 ASP MET PRO ILE GLY ARG ASN VAL LEU GLU LEU ASN ASP SEQRES 22 A 841 VAL ARG GLN SER ALA ASN TYR THR CYS VAL ALA MET SER SEQRES 23 A 841 THR LEU GLY VAL ILE GLU ALA ILE ALA GLN ILE THR VAL SEQRES 24 A 841 LYS ALA LEU PRO LYS PRO PRO GLY THR PRO VAL VAL THR SEQRES 25 A 841 GLU SER THR ALA THR SER ILE THR LEU THR TRP ASP SER SEQRES 26 A 841 GLY ASN PRO GLU PRO VAL SER TYR TYR ILE ILE GLN HIS SEQRES 27 A 841 LYS PRO LYS ASN SER GLU GLU PRO TYR LYS GLU ILE ASP SEQRES 28 A 841 GLY ILE ALA THR THR ARG TYR SER VAL ALA GLY LEU SER SEQRES 29 A 841 PRO TYR SER ASP TYR GLU PHE ARG VAL VAL ALA VAL ASN SEQRES 30 A 841 ASN ILE GLY ARG GLY PRO ALA SER GLU PRO VAL LEU THR SEQRES 31 A 841 GLN THR SER GLU GLN ALA PRO SER SER ALA PRO ARG ASP SEQRES 32 A 841 VAL GLN ALA ARG MET LEU SER SER THR THR ILE LEU VAL SEQRES 33 A 841 GLN TRP LYS GLU PRO GLU GLU PRO ASN GLY GLN ILE GLN SEQRES 34 A 841 GLY TYR ARG VAL TYR TYR THR MET ASP PRO THR GLN HIS SEQRES 35 A 841 VAL ASN ASN TRP MET LYS HIS ASN VAL ALA ASP SER GLN SEQRES 36 A 841 ILE THR THR ILE GLY ASN LEU VAL PRO GLN LYS THR TYR SEQRES 37 A 841 SER VAL LYS VAL LEU ALA PHE THR SER ILE GLY ASP GLY SEQRES 38 A 841 PRO LEU SER SER ASP ILE GLN VAL ILE THR GLN THR GLY SEQRES 39 A 841 VAL PRO GLY GLN PRO LEU ASN PHE LYS ALA GLU PRO GLU SEQRES 40 A 841 SER GLU THR SER ILE LEU LEU SER TRP THR PRO PRO ARG SEQRES 41 A 841 SER ASP THR ILE ALA SER TYR GLU LEU VAL TYR ARG ASP SEQRES 42 A 841 GLY ASP GLN GLY GLU GLU GLN ARG ILE THR ILE GLU PRO SEQRES 43 A 841 GLY THR SER TYR ARG LEU GLN GLY LEU LYS PRO ASN SER SEQRES 44 A 841 LEU TYR TYR PHE ARG LEU SER ALA ARG SER PRO GLN GLY SEQRES 45 A 841 LEU GLY ALA SER THR ALA GLU ILE SER ALA ARG THR MET SEQRES 46 A 841 GLN SER MET PHE ALA LYS ASN PHE HIS VAL LYS ALA VAL SEQRES 47 A 841 MET LYS THR SER VAL LEU LEU SER TRP GLU ILE PRO GLU SEQRES 48 A 841 ASN TYR ASN SER ALA MET PRO PHE LYS ILE LEU TYR ASP SEQRES 49 A 841 ASP GLY LYS MET VAL GLU GLU VAL ASP GLY ARG ALA THR SEQRES 50 A 841 GLN LYS LEU ILE VAL ASN LEU LYS PRO GLU LYS SER TYR SEQRES 51 A 841 SER PHE VAL LEU THR ASN ARG GLY ASN SER ALA GLY GLY SEQRES 52 A 841 LEU GLN HIS ARG VAL THR ALA LYS THR ALA PRO ASP VAL SEQRES 53 A 841 LEU ARG THR LYS PRO ALA PHE ILE GLY LYS THR ASN LEU SEQRES 54 A 841 ASP GLY MET ILE THR VAL GLN LEU PRO ASP VAL PRO ALA SEQRES 55 A 841 ASN GLU ASN ILE LYS GLY TYR TYR ILE ILE ILE VAL PRO SEQRES 56 A 841 LEU LYS LYS SER ARG GLY LYS PHE ILE LYS PRO TRP GLU SEQRES 57 A 841 SER PRO ASP GLU MET GLU LEU ASP GLU LEU LEU LYS GLU SEQRES 58 A 841 ILE SER ARG LYS ARG ARG SER ILE ARG TYR GLY ARG GLU SEQRES 59 A 841 VAL GLU LEU LYS PRO TYR ILE ALA ALA HIS PHE ASP VAL SEQRES 60 A 841 LEU PRO THR GLU PHE THR LEU GLY ASP ASP LYS HIS TYR SEQRES 61 A 841 GLY GLY PHE THR ASN LYS GLN LEU GLN SER GLY GLN GLU SEQRES 62 A 841 TYR VAL PHE PHE VAL LEU ALA VAL MET ASP HIS ALA GLU SEQRES 63 A 841 SER LYS MET TYR ALA THR SER PRO TYR SER ASP PRO VAL SEQRES 64 A 841 VAL SER MET ASP LEU ASP PRO GLN PRO ILE THR ASP GLU SEQRES 65 A 841 GLU GLU LYS HIS HIS HIS HIS HIS HIS SEQRES 1 B 348 ALA GLN PRO ALA ALA ARG ASP LEU LYS VAL VAL THR LYS SEQRES 2 B 348 ARG GLY SER ALA ASP GLY CYS THR ASP TRP SER VAL ASP SEQRES 3 B 348 ILE LYS LYS TYR GLN VAL LEU VAL GLY GLU PRO VAL ARG SEQRES 4 B 348 ILE LYS CYS ALA LEU PHE TYR GLY TYR ILE ARG THR ASN SEQRES 5 B 348 TYR SER LEU ALA GLN SER ALA GLY LEU SER LEU MET TRP SEQRES 6 B 348 TYR LYS SER SER GLY PRO GLY ASP PHE GLU GLU PRO ILE SEQRES 7 B 348 ALA PHE ASP GLY SER ARG MET SER LYS GLU GLU ASP SER SEQRES 8 B 348 ILE TRP PHE ARG PRO THR LEU LEU GLN ASP SER GLY LEU SEQRES 9 B 348 TYR ALA CYS VAL ILE ARG ASN SER THR TYR CYS MET LYS SEQRES 10 B 348 VAL SER ILE SER LEU THR VAL GLY GLU ASN ASP THR GLY SEQRES 11 B 348 LEU CYS TYR ASN SER LYS MET LYS TYR PHE GLU LYS ALA SEQRES 12 B 348 GLU LEU SER LYS SER LYS GLU ILE SER CYS ARG ASP ILE SEQRES 13 B 348 GLU ASP PHE LEU LEU PRO THR ARG GLU PRO GLU ILE LEU SEQRES 14 B 348 TRP TYR LYS GLU CYS ARG THR LYS ALA TRP ARG PRO SER SEQRES 15 B 348 ILE VAL PHE LYS ARG ASP THR LEU LEU ILE LYS GLU VAL SEQRES 16 B 348 LYS GLU ASP ASP ILE GLY ASN TYR THR CYS GLU LEU LYS SEQRES 17 B 348 TYR GLY GLY PHE VAL VAL ARG ARG THR THR GLU LEU THR SEQRES 18 B 348 VAL THR ALA PRO LEU THR ASP LYS PRO PRO LYS LEU LEU SEQRES 19 B 348 TYR PRO MET GLU SER LYS LEU THR VAL GLN GLU THR GLN SEQRES 20 B 348 LEU GLY GLY SER ALA ASN LEU THR CYS ARG ALA PHE PHE SEQRES 21 B 348 GLY TYR SER GLY ASP VAL SER PRO LEU ILE TYR TRP MET SEQRES 22 B 348 LYS GLY GLU LYS PHE ILE GLU ASP LEU ASP GLU ASN ARG SEQRES 23 B 348 VAL TRP GLU SER ASP ILE ARG ILE LEU LYS GLU HIS LEU SEQRES 24 B 348 GLY GLU GLN GLU VAL SER ILE SER LEU ILE VAL ASP SER SEQRES 25 B 348 VAL GLU GLU GLY ASP LEU GLY ASN TYR SER CYS TYR VAL SEQRES 26 B 348 GLU ASN GLY ASN GLY ARG ARG HIS ALA SER VAL LEU LEU SEQRES 27 B 348 HIS LYS ARG LYS HIS HIS HIS HIS HIS HIS HET NAG C 1 14 HET NAG C 2 14 HET NAG D 1 14 HET NAG D 2 14 HET BMA D 3 11 HET MAN D 4 11 HET MAN D 5 11 HET NAG B 401 14 HET NAG B 402 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE FORMUL 3 NAG 6(C8 H15 N O6) FORMUL 4 BMA C6 H12 O6 FORMUL 4 MAN 2(C6 H12 O6) HELIX 1 AA1 ARG A 124 ILE A 128 5 5 HELIX 2 AA2 GLU A 205 GLN A 209 5 5 HELIX 3 AA3 HIS A 469 TRP A 473 5 5 HELIX 4 AA4 ALA B 54 TYR B 57 5 4 HELIX 5 AA5 ASN B 63 ALA B 70 1 8 HELIX 6 AA6 LEU B 109 SER B 113 5 5 HELIX 7 AA7 LYS B 207 ILE B 211 5 5 HELIX 8 AA8 ILE B 290 ASP B 294 1 5 SHEET 1 AA1 4 ARG A 32 ARG A 35 0 SHEET 2 AA1 4 ALA A 48 THR A 55 -1 O THR A 55 N ARG A 32 SHEET 3 AA1 4 SER A 87 ILE A 91 -1 O ILE A 91 N ALA A 48 SHEET 4 AA1 4 PHE A 76 GLU A 80 -1 N ILE A 79 O VAL A 88 SHEET 1 AA2 5 GLN A 40 VAL A 43 0 SHEET 2 AA2 5 GLY A 112 LEU A 123 1 O LEU A 123 N GLY A 42 SHEET 3 AA2 5 ALA A 101 ASN A 109 -1 N ALA A 107 O ILE A 114 SHEET 4 AA2 5 LYS A 61 LYS A 66 -1 N ASN A 65 O GLU A 104 SHEET 5 AA2 5 LYS A 69 LYS A 70 -1 O LYS A 69 N LYS A 66 SHEET 1 AA3 4 THR A 134 MET A 137 0 SHEET 2 AA3 4 ALA A 150 SER A 157 -1 O ALA A 155 N MET A 137 SHEET 3 AA3 4 ILE A 195 ILE A 201 -1 O ILE A 201 N ALA A 150 SHEET 4 AA3 4 ILE A 182 ARG A 186 -1 N LYS A 183 O GLN A 200 SHEET 1 AA4 5 LYS A 142 GLU A 145 0 SHEET 2 AA4 5 ALA A 228 ARG A 233 1 O ARG A 233 N VAL A 144 SHEET 3 AA4 5 GLY A 210 ASN A 218 -1 N TYR A 212 O ALA A 228 SHEET 4 AA4 5 GLU A 163 LYS A 168 -1 N GLU A 163 O THR A 217 SHEET 5 AA4 5 LEU A 171 PRO A 172 -1 O LEU A 171 N LYS A 168 SHEET 1 AA5 4 LYS A 142 GLU A 145 0 SHEET 2 AA5 4 ALA A 228 ARG A 233 1 O ARG A 233 N VAL A 144 SHEET 3 AA5 4 GLY A 210 ASN A 218 -1 N TYR A 212 O ALA A 228 SHEET 4 AA5 4 GLY A 221 TYR A 224 -1 O ARG A 223 N ALA A 216 SHEET 1 AA6 3 ARG A 244 ILE A 247 0 SHEET 2 AA6 3 VAL A 260 VAL A 267 -1 O VAL A 267 N ARG A 244 SHEET 3 AA6 3 ARG A 293 LEU A 298 -1 O LEU A 296 N ILE A 262 SHEET 1 AA7 4 HIS A 252 GLU A 253 0 SHEET 2 AA7 4 ILE A 321 THR A 325 1 O GLN A 323 N HIS A 252 SHEET 3 AA7 4 ALA A 305 MET A 312 -1 N TYR A 307 O ALA A 322 SHEET 4 AA7 4 TYR A 273 MET A 277 -1 N MET A 277 O THR A 308 SHEET 1 AA8 4 HIS A 252 GLU A 253 0 SHEET 2 AA8 4 ILE A 321 THR A 325 1 O GLN A 323 N HIS A 252 SHEET 3 AA8 4 ALA A 305 MET A 312 -1 N TYR A 307 O ALA A 322 SHEET 4 AA8 4 VAL A 317 ILE A 318 -1 O ILE A 318 N ALA A 311 SHEET 1 AA9 3 GLY A 334 SER A 341 0 SHEET 2 AA9 3 ILE A 346 ASP A 351 -1 O THR A 347 N GLU A 340 SHEET 3 AA9 3 ARG A 384 VAL A 387 -1 O TYR A 385 N LEU A 348 SHEET 1 AB1 4 LYS A 375 ILE A 380 0 SHEET 2 AB1 4 TYR A 360 LYS A 366 -1 N HIS A 365 O LYS A 375 SHEET 3 AB1 4 ASP A 395 VAL A 403 -1 O GLU A 397 N LYS A 366 SHEET 4 AB1 4 VAL A 415 GLN A 418 -1 O VAL A 415 N PHE A 398 SHEET 1 AB2 3 ARG A 429 MET A 435 0 SHEET 2 AB2 3 ILE A 441 LYS A 446 -1 O LEU A 442 N ARG A 434 SHEET 3 AB2 3 ILE A 483 ILE A 486 -1 O THR A 484 N VAL A 443 SHEET 1 AB3 3 GLY A 457 VAL A 460 0 SHEET 2 AB3 3 VAL A 497 PHE A 502 -1 O LEU A 500 N ARG A 459 SHEET 3 AB3 3 ASP A 507 ILE A 514 -1 O ILE A 514 N VAL A 497 SHEET 1 AB4 3 LEU A 527 GLU A 532 0 SHEET 2 AB4 3 SER A 538 THR A 544 -1 O LEU A 540 N GLU A 532 SHEET 3 AB4 3 SER A 576 GLN A 580 -1 O LEU A 579 N ILE A 539 SHEET 1 AB5 4 GLN A 567 ILE A 571 0 SHEET 2 AB5 4 SER A 553 ASP A 560 -1 N TYR A 558 O GLN A 567 SHEET 3 AB5 4 LEU A 587 ARG A 595 -1 O TYR A 589 N ARG A 559 SHEET 4 AB5 4 LEU A 600 SER A 603 -1 O GLY A 601 N ALA A 594 SHEET 1 AB6 4 GLN A 567 ILE A 571 0 SHEET 2 AB6 4 SER A 553 ASP A 560 -1 N TYR A 558 O GLN A 567 SHEET 3 AB6 4 LEU A 587 ARG A 595 -1 O TYR A 589 N ARG A 559 SHEET 4 AB6 4 ILE A 607 ARG A 610 -1 O ALA A 609 N TYR A 588 SHEET 1 AB7 3 THR B 32 VAL B 36 0 SHEET 2 AB7 3 CYS B 126 GLY B 136 1 O LYS B 128 N TRP B 34 SHEET 3 AB7 3 TYR B 41 LEU B 44 1 N TYR B 41 O SER B 132 SHEET 1 AB8 4 THR B 32 VAL B 36 0 SHEET 2 AB8 4 CYS B 126 GLY B 136 1 O LYS B 128 N TRP B 34 SHEET 3 AB8 4 GLY B 114 ARG B 121 -1 N GLY B 114 O LEU B 133 SHEET 4 AB8 4 SER B 73 SER B 79 -1 N MET B 75 O VAL B 119 SHEET 1 AB9 2 VAL B 49 LYS B 52 0 SHEET 2 AB9 2 SER B 102 PHE B 105 -1 O PHE B 105 N VAL B 49 SHEET 1 AC1 4 TYR B 150 GLU B 155 0 SHEET 2 AC1 4 PHE B 223 THR B 234 1 O THR B 234 N ALA B 154 SHEET 3 AC1 4 GLY B 212 TYR B 220 -1 N GLY B 212 O LEU B 231 SHEET 4 AC1 4 TYR B 182 LYS B 183 -1 N TYR B 182 O THR B 215 SHEET 1 AC2 3 LYS B 160 ILE B 162 0 SHEET 2 AC2 3 LEU B 201 ILE B 203 -1 O ILE B 203 N LYS B 160 SHEET 3 AC2 3 ILE B 194 PHE B 196 -1 N VAL B 195 O LEU B 202 SHEET 1 AC3 4 LYS B 243 TYR B 246 0 SHEET 2 AC3 4 ALA B 263 PHE B 271 -1 O ARG B 268 N TYR B 246 SHEET 3 AC3 4 GLU B 312 VAL B 321 -1 O VAL B 321 N ALA B 263 SHEET 4 AC3 4 VAL B 298 GLU B 300 -1 N TRP B 299 O ILE B 320 SHEET 1 AC4 4 LYS B 243 TYR B 246 0 SHEET 2 AC4 4 ALA B 263 PHE B 271 -1 O ARG B 268 N TYR B 246 SHEET 3 AC4 4 GLU B 312 VAL B 321 -1 O VAL B 321 N ALA B 263 SHEET 4 AC4 4 ARG B 304 HIS B 309 -1 N ARG B 304 O SER B 316 SHEET 1 AC5 5 THR B 253 GLU B 256 0 SHEET 2 AC5 5 GLY B 341 HIS B 350 1 O LEU B 348 N GLN B 255 SHEET 3 AC5 5 GLY B 330 ASN B 338 -1 N VAL B 336 O ARG B 343 SHEET 4 AC5 5 LEU B 280 LYS B 285 -1 N TYR B 282 O TYR B 335 SHEET 5 AC5 5 LYS B 288 PHE B 289 -1 O LYS B 288 N LYS B 285 SSBOND 1 CYS A 52 CYS A 105 1555 1555 2.03 SSBOND 2 CYS A 264 CYS A 309 1555 1555 2.03 SSBOND 3 CYS B 31 CYS B 126 1555 1555 2.03 SSBOND 4 CYS B 53 CYS B 118 1555 1555 2.04 SSBOND 5 CYS B 143 CYS B 185 1555 1555 2.04 SSBOND 6 CYS B 164 CYS B 216 1555 1555 2.03 SSBOND 7 CYS B 267 CYS B 334 1555 1555 2.03 LINK ND2 ASN B 122 C1 NAG B 401 1555 1555 1.46 LINK ND2 ASN B 138 C1 NAG B 402 1555 1555 1.45 LINK ND2 ASN B 213 C1 NAG C 1 1555 1555 1.44 LINK ND2 ASN B 264 C1 NAG D 1 1555 1555 1.45 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.44 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.45 LINK O4 NAG D 2 C1 BMA D 3 1555 1555 1.44 LINK O3 BMA D 3 C1 MAN D 4 1555 1555 1.46 LINK O6 BMA D 3 C1 MAN D 5 1555 1555 1.46 CISPEP 1 ASP A 57 PRO A 58 0 1.06 CISPEP 2 GLN A 92 PRO A 93 0 -1.91 CISPEP 3 THR A 96 PRO A 97 0 -2.58 CISPEP 4 ASN A 159 PRO A 160 0 2.65 CISPEP 5 SER A 269 PRO A 270 0 1.34 CISPEP 6 PRO B 82 GLY B 83 0 -1.69 CISPEP 7 ARG B 106 PRO B 107 0 -0.38 CISPEP 8 GLY B 221 GLY B 222 0 7.04 CISPEP 9 TYR B 246 PRO B 247 0 -4.83 CISPEP 10 LEU B 310 GLY B 311 0 -10.61 CISPEP 11 GLU B 326 GLY B 327 0 9.93 CRYST1 286.295 286.295 70.183 90.00 90.00 90.00 I 41 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.003493 0.000000 0.000000 0.00000 SCALE2 0.000000 0.003493 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014248 0.00000