HEADER IMMUNE SYSTEM 27-FEB-15 4YHZ TITLE CRYSTAL STRUCTURE OF 304M3-B FAB IN COMPLEX WITH H3K4ME3 PEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: FAB HEAVY CHAIN; COMPND 3 CHAIN: H; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: FAB LIGHT CHAIN; COMPND 7 CHAIN: L; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: H3K4ME3 PEPTIDE; COMPND 11 CHAIN: P; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_TAXID: 9606; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: ATCC 55244; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 9 ORGANISM_TAXID: 9606; SOURCE 10 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 11 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 12 EXPRESSION_SYSTEM_STRAIN: ATCC 55244; SOURCE 13 MOL_ID: 3; SOURCE 14 SYNTHETIC: YES; SOURCE 15 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 16 ORGANISM_TAXID: 32630 KEYWDS ANTIBODY, FAB, HEAD-TO-HEAD DIMERIZATION, H3K4ME3, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR T.HATTORI,I.S.DEMENTIEVA,S.P.MONTANO,S.KOIDE REVDAT 6 27-SEP-23 4YHZ 1 REMARK REVDAT 5 11-DEC-19 4YHZ 1 REMARK REVDAT 4 13-SEP-17 4YHZ 1 JRNL REMARK REVDAT 3 02-MAR-16 4YHZ 1 JRNL REVDAT 2 17-FEB-16 4YHZ 1 JRNL REVDAT 1 10-FEB-16 4YHZ 0 JRNL AUTH T.HATTORI,D.LAI,I.S.DEMENTIEVA,S.P.MONTANO,K.KUROSAWA, JRNL AUTH 2 Y.ZHENG,L.R.AKIN,K.M.SWIST-ROSOWSKA,A.T.GRZYBOWSKI,A.KOIDE, JRNL AUTH 3 K.KRAJEWSKI,B.D.STRAHL,N.L.KELLEHER,A.J.RUTHENBURG,S.KOIDE JRNL TITL ANTIGEN CLASPING BY TWO ANTIGEN-BINDING SITES OF AN JRNL TITL 2 EXCEPTIONALLY SPECIFIC ANTIBODY FOR HISTONE METHYLATION. JRNL REF PROC.NATL.ACAD.SCI.USA V. 113 2092 2016 JRNL REFN ESSN 1091-6490 JRNL PMID 26862167 JRNL DOI 10.1073/PNAS.1522691113 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.9_1692) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.71 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 41978 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.184 REMARK 3 R VALUE (WORKING SET) : 0.183 REMARK 3 FREE R VALUE : 0.213 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.650 REMARK 3 FREE R VALUE TEST SET COUNT : 1954 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.7215 - 5.5494 1.00 2979 188 0.1724 0.2207 REMARK 3 2 5.5494 - 4.4057 1.00 2905 149 0.1386 0.1487 REMARK 3 3 4.4057 - 3.8490 1.00 2901 128 0.1458 0.1674 REMARK 3 4 3.8490 - 3.4972 1.00 2891 140 0.1728 0.1946 REMARK 3 5 3.4972 - 3.2466 1.00 2851 142 0.1969 0.2108 REMARK 3 6 3.2466 - 3.0552 1.00 2850 124 0.2113 0.2390 REMARK 3 7 3.0552 - 2.9022 1.00 2861 138 0.2172 0.2644 REMARK 3 8 2.9022 - 2.7759 1.00 2836 153 0.2176 0.2504 REMARK 3 9 2.7759 - 2.6691 1.00 2854 130 0.2161 0.2535 REMARK 3 10 2.6691 - 2.5770 1.00 2834 135 0.2237 0.2478 REMARK 3 11 2.5770 - 2.4964 1.00 2837 143 0.2282 0.3270 REMARK 3 12 2.4964 - 2.4250 1.00 2858 112 0.2285 0.2660 REMARK 3 13 2.4250 - 2.3612 1.00 2804 161 0.2480 0.2963 REMARK 3 14 2.3612 - 2.3036 0.96 2763 111 0.2577 0.3046 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.250 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.310 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 3484 REMARK 3 ANGLE : 1.093 4732 REMARK 3 CHIRALITY : 0.043 527 REMARK 3 PLANARITY : 0.005 604 REMARK 3 DIHEDRAL : 14.191 1242 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4YHZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-MAR-15. REMARK 100 THE DEPOSITION ID IS D_1000207489. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-JUN-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 42048 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 9.100 REMARK 200 R MERGE (I) : 0.09800 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 20.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.34 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 8.70 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 4YHY REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 74.29 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.78 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% GLYCEROL, 1.8 M AMMONIUM SULFATE, REMARK 280 0.1 M HEPES, PH 7.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 32.12167 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 64.24333 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 64.24333 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 32.12167 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 15260 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 37890 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -80.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: H, L, P REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 64.24333 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS H 137 REMARK 465 SER H 138 REMARK 465 THR H 139 REMARK 465 SER H 140 REMARK 465 CYS H 224 REMARK 465 ASP H 225 REMARK 465 LYS H 226 REMARK 465 THR H 227 REMARK 465 HIS H 228 REMARK 465 THR H 229 REMARK 465 SER L 1 REMARK 465 TYR L 2 REMARK 465 VAL L 3 REMARK 465 CYS L 215 REMARK 465 SER P 10 REMARK 465 THR P 11 REMARK 465 GLY P 12 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG H 102 -75.50 -92.42 REMARK 500 SER H 195 10.74 -67.53 REMARK 500 LYS H 222 -65.67 -97.51 REMARK 500 ASP L 50 -45.05 72.08 REMARK 500 SER L 51 6.65 -157.08 REMARK 500 ALA L 83 174.74 176.16 REMARK 500 ASN L 139 72.34 55.30 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 GOL H 302 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL H 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL H 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL H 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL H 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL H 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL L 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL L 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 L 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Ligand residues M3L P 4 through REMARK 800 GLN P 5 bound to THR P 3 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4YHP RELATED DB: PDB REMARK 900 RELATED ID: 4YHY RELATED DB: PDB DBREF 4YHZ H 1 229 PDB 4YHZ 4YHZ 1 229 DBREF 4YHZ L 1 215 PDB 4YHZ 4YHZ 1 215 DBREF 4YHZ P 1 12 PDB 4YHZ 4YHZ 1 12 SEQRES 1 H 229 GLU VAL GLN LEU VAL GLU THR GLY GLY GLY VAL VAL GLN SEQRES 2 H 229 PRO GLY ARG SER LEU ARG LEU SER CYS THR ALA SER GLY SEQRES 3 H 229 PHE THR PHE ARG ASP TYR TRP MET SER TRP VAL ARG GLN SEQRES 4 H 229 ALA PRO GLY LYS GLY LEU GLU TRP VAL ALA ASP ILE HIS SEQRES 5 H 229 GLN ASP GLY GLN VAL ARG TYR TYR LEU ASP ALA VAL LYS SEQRES 6 H 229 GLY ARG PHE THR ILE SER ARG ASP ASN ALA LYS SER SER SEQRES 7 H 229 LEU TYR LEU GLN MET ASN SER LEU GLY ALA GLU ASP THR SEQRES 8 H 229 ALA VAL TYR TYR CYS ALA ARG ASN PHE VAL ARG GLY PHE SEQRES 9 H 229 GLY TRP HIS PHE ASP LEU TRP GLY ARG GLY THR LEU VAL SEQRES 10 H 229 THR VAL SER SER ALA SER THR LYS GLY PRO SER VAL PHE SEQRES 11 H 229 PRO LEU ALA PRO SER SER LYS SER THR SER GLY GLY THR SEQRES 12 H 229 ALA ALA LEU GLY CYS LEU VAL LYS ASP TYR PHE PRO GLU SEQRES 13 H 229 PRO VAL THR VAL SER TRP ASN SER GLY ALA LEU THR SER SEQRES 14 H 229 GLY VAL HIS THR PHE PRO ALA VAL LEU GLN SER SER GLY SEQRES 15 H 229 LEU TYR SER LEU SER SER VAL VAL THR VAL PRO SER SER SEQRES 16 H 229 SER LEU GLY THR GLN THR TYR ILE CYS ASN VAL ASN HIS SEQRES 17 H 229 LYS PRO SER ASN THR LYS VAL ASP LYS LYS VAL GLU PRO SEQRES 18 H 229 LYS SER CYS ASP LYS THR HIS THR SEQRES 1 L 215 SER TYR VAL LEU THR GLN PRO PRO SER VAL SER VAL ALA SEQRES 2 L 215 PRO GLY GLN THR ALA ARG ILE THR CYS GLY GLY THR ASN SEQRES 3 L 215 ILE GLY ASP ILE SER VAL HIS TRP TYR GLN GLN ARG PRO SEQRES 4 L 215 GLY GLN ALA PRO LEU VAL VAL VAL TYR ASP ASP SER ASP SEQRES 5 L 215 ARG PRO SER GLY ILE PRO GLU ARG PHE SER GLY SER ASN SEQRES 6 L 215 SER GLY ASN THR ALA THR LEU THR ILE SER ARG VAL GLU SEQRES 7 L 215 ALA GLY ASP GLU ALA ASP TYR TYR CYS GLN VAL TRP ASP SEQRES 8 L 215 ASP SER ILE ASN ALA TYR VAL PHE GLY THR GLY THR LYS SEQRES 9 L 215 VAL THR VAL LEU ARG THR VAL ALA ALA PRO SER VAL PHE SEQRES 10 L 215 ILE PHE PRO PRO SER ASP SER GLN LEU LYS SER GLY THR SEQRES 11 L 215 ALA SER VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG SEQRES 12 L 215 GLU ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN SEQRES 13 L 215 SER GLY ASN SER GLN GLU SER VAL THR GLU GLN ASP SER SEQRES 14 L 215 LYS ASP SER THR TYR SER LEU SER SER THR LEU THR LEU SEQRES 15 L 215 SER LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS SEQRES 16 L 215 GLU VAL THR HIS GLN GLY LEU SER SER PRO VAL THR LYS SEQRES 17 L 215 SER PHE ASN ARG GLY GLU CYS SEQRES 1 P 12 ALA ARG THR M3L GLN THR ALA ARG LYS SER THR GLY HET M3L P 4 12 HET GOL H 301 6 HET GOL H 302 4 HET GOL H 303 6 HET GOL H 304 6 HET GOL H 305 6 HET GOL L 301 6 HET GOL L 302 6 HET SO4 L 303 5 HETNAM M3L N-TRIMETHYLLYSINE HETNAM GOL GLYCEROL HETNAM SO4 SULFATE ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 M3L C9 H21 N2 O2 1+ FORMUL 4 GOL 7(C3 H8 O3) FORMUL 11 SO4 O4 S 2- FORMUL 12 HOH *174(H2 O) HELIX 1 AA1 THR H 28 TYR H 32 5 5 HELIX 2 AA2 ASP H 62 LYS H 65 5 4 HELIX 3 AA3 ASN H 74 LYS H 76 5 3 HELIX 4 AA4 GLY H 87 THR H 91 5 5 HELIX 5 AA5 SER H 164 ALA H 166 5 3 HELIX 6 AA6 SER H 195 LEU H 197 5 3 HELIX 7 AA7 LYS H 209 ASN H 212 5 4 HELIX 8 AA8 ASN L 26 ILE L 30 5 5 HELIX 9 AA9 GLU L 78 GLU L 82 5 5 HELIX 10 AB1 SER L 122 LYS L 127 1 6 HELIX 11 AB2 LYS L 184 LYS L 189 1 6 SHEET 1 AA1 4 GLN H 3 THR H 7 0 SHEET 2 AA1 4 LEU H 18 SER H 25 -1 O SER H 21 N THR H 7 SHEET 3 AA1 4 SER H 78 MET H 83 -1 O MET H 83 N LEU H 18 SHEET 4 AA1 4 PHE H 68 ASP H 73 -1 N THR H 69 O GLN H 82 SHEET 1 AA2 6 GLY H 10 VAL H 12 0 SHEET 2 AA2 6 THR H 115 VAL H 119 1 O THR H 118 N GLY H 10 SHEET 3 AA2 6 ALA H 92 VAL H 101 -1 N TYR H 94 O THR H 115 SHEET 4 AA2 6 MET H 34 GLN H 39 -1 N VAL H 37 O TYR H 95 SHEET 5 AA2 6 LEU H 45 ILE H 51 -1 O GLU H 46 N ARG H 38 SHEET 6 AA2 6 ARG H 58 TYR H 60 -1 O TYR H 59 N ASP H 50 SHEET 1 AA3 4 GLY H 10 VAL H 12 0 SHEET 2 AA3 4 THR H 115 VAL H 119 1 O THR H 118 N GLY H 10 SHEET 3 AA3 4 ALA H 92 VAL H 101 -1 N TYR H 94 O THR H 115 SHEET 4 AA3 4 TRP H 106 TRP H 111 -1 O HIS H 107 N PHE H 100 SHEET 1 AA4 4 SER H 128 LEU H 132 0 SHEET 2 AA4 4 THR H 143 TYR H 153 -1 O GLY H 147 N LEU H 132 SHEET 3 AA4 4 TYR H 184 PRO H 193 -1 O LEU H 186 N VAL H 150 SHEET 4 AA4 4 VAL H 171 THR H 173 -1 N HIS H 172 O VAL H 189 SHEET 1 AA5 4 SER H 128 LEU H 132 0 SHEET 2 AA5 4 THR H 143 TYR H 153 -1 O GLY H 147 N LEU H 132 SHEET 3 AA5 4 TYR H 184 PRO H 193 -1 O LEU H 186 N VAL H 150 SHEET 4 AA5 4 VAL H 177 LEU H 178 -1 N VAL H 177 O SER H 185 SHEET 1 AA6 3 THR H 159 TRP H 162 0 SHEET 2 AA6 3 ILE H 203 HIS H 208 -1 O ASN H 205 N SER H 161 SHEET 3 AA6 3 THR H 213 LYS H 218 -1 O VAL H 215 N VAL H 206 SHEET 1 AA7 5 SER L 9 VAL L 12 0 SHEET 2 AA7 5 THR L 103 VAL L 107 1 O THR L 106 N VAL L 10 SHEET 3 AA7 5 ALA L 83 ASP L 91 -1 N ALA L 83 O VAL L 105 SHEET 4 AA7 5 HIS L 33 GLN L 37 -1 N GLN L 37 O ASP L 84 SHEET 5 AA7 5 LEU L 44 VAL L 47 -1 O VAL L 47 N TRP L 34 SHEET 1 AA8 4 SER L 9 VAL L 12 0 SHEET 2 AA8 4 THR L 103 VAL L 107 1 O THR L 106 N VAL L 10 SHEET 3 AA8 4 ALA L 83 ASP L 91 -1 N ALA L 83 O VAL L 105 SHEET 4 AA8 4 ALA L 96 PHE L 99 -1 O ALA L 96 N ASP L 91 SHEET 1 AA9 3 ALA L 18 GLY L 23 0 SHEET 2 AA9 3 THR L 69 ILE L 74 -1 O ILE L 74 N ALA L 18 SHEET 3 AA9 3 PHE L 61 SER L 66 -1 N SER L 62 O THR L 73 SHEET 1 AB1 4 SER L 115 PHE L 119 0 SHEET 2 AB1 4 THR L 130 PHE L 140 -1 O LEU L 136 N PHE L 117 SHEET 3 AB1 4 TYR L 174 SER L 183 -1 O LEU L 182 N ALA L 131 SHEET 4 AB1 4 SER L 160 VAL L 164 -1 N GLN L 161 O THR L 179 SHEET 1 AB2 4 ALA L 154 LEU L 155 0 SHEET 2 AB2 4 LYS L 146 VAL L 151 -1 N VAL L 151 O ALA L 154 SHEET 3 AB2 4 VAL L 192 THR L 198 -1 O GLU L 196 N GLN L 148 SHEET 4 AB2 4 VAL L 206 ASN L 211 -1 O VAL L 206 N VAL L 197 SSBOND 1 CYS H 22 CYS H 96 1555 1555 2.05 SSBOND 2 CYS H 148 CYS H 204 1555 1555 2.04 SSBOND 3 CYS L 22 CYS L 87 1555 1555 2.07 SSBOND 4 CYS L 135 CYS L 195 1555 1555 2.02 LINK C THR P 3 N M3L P 4 1555 1555 1.33 LINK C M3L P 4 N GLN P 5 1555 1555 1.33 CISPEP 1 PHE H 154 PRO H 155 0 -8.72 CISPEP 2 GLU H 156 PRO H 157 0 -1.89 CISPEP 3 TYR L 141 PRO L 142 0 -0.54 SITE 1 AC1 9 ASP H 31 TYR H 32 GLN H 53 PHE H 100 SITE 2 AC1 9 VAL H 101 ARG H 102 TRP H 106 HOH H 412 SITE 3 AC1 9 HOH H 465 SITE 1 AC2 5 PHE H 104 TRP H 106 HOH H 454 M3L P 4 SITE 2 AC2 5 THR P 6 SITE 1 AC3 5 ARG H 30 ASP H 73 ASN H 74 ALA H 75 SITE 2 AC3 5 HOH H 457 SITE 1 AC4 3 PHE H 27 ARG H 98 HOH H 401 SITE 1 AC5 2 ARG H 16 SER H 17 SITE 1 AC6 7 GLN L 36 ARG L 38 ILE L 57 PRO L 58 SITE 2 AC6 7 PHE L 61 GLY L 80 ASP L 81 SITE 1 AC7 4 PRO L 58 GLU L 59 ARG L 60 ARG L 76 SITE 1 AC8 3 GLY L 67 ASN L 68 THR L 69 SITE 1 AC9 14 TRP H 33 ASP H 50 GLY H 103 TRP H 106 SITE 2 AC9 14 GOL H 302 HOH H 427 ASP L 29 TRP L 90 SITE 3 AC9 14 TYR L 97 HOH L 404 THR P 3 THR P 6 SITE 4 AC9 14 ALA P 7 HOH P 102 CRYST1 130.375 130.375 96.365 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007670 0.004428 0.000000 0.00000 SCALE2 0.000000 0.008857 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010377 0.00000