data_4YK1 # _entry.id 4YK1 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.397 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4YK1 pdb_00004yk1 10.2210/pdb4yk1/pdb WWPDB D_1000207584 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2016-03-09 2 'Structure model' 1 1 2017-01-11 3 'Structure model' 1 2 2024-10-23 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_entry_details 5 3 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 4YK1 _pdbx_database_status.recvd_initial_deposition_date 2015-03-03 _pdbx_database_status.SG_entry Y _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type TargetTrack . SSGCID-BaroA.17330.c unspecified PDB . 4YK2 unspecified PDB . 4YK3 unspecified # _audit_author.name 'Seattle Structural Genomics Center for Infectious Disease (SSGCID)' _audit_author.pdbx_ordinal 1 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Structure _citation.journal_id_ASTM STRUE6 _citation.journal_id_CSD 2005 _citation.journal_id_ISSN 1878-4186 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 25 _citation.language ? _citation.page_first 203 _citation.page_last 211 _citation.title 'The BID Domain of Type IV Secretion Substrates Forms a Conserved Four-Helix Bundle Topped with a Hook.' _citation.year 2017 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.str.2016.10.010 _citation.pdbx_database_id_PubMed 27889208 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Stanger, F.V.' 1 ? primary 'de Beer, T.A.' 2 ? primary 'Dranow, D.M.' 3 ? primary 'Schirmer, T.' 4 ? primary 'Phan, I.' 5 ? primary 'Dehio, C.' 6 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Bartonella effector protein (Bep) substrate of VirB T4SS' 17192.295 1 ? ? 'BID domain (UNP residues 298-434)' ? 2 water nat water 18.015 99 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name BepE # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(MSE)AHHHHHH(MSE)LIPAEQLPPLKEEEVIEKIENDACIQKSLEKIRALSKLIYNNPEILEQDISHINANPK(MSE) GRELSERIINSPKSIGRLKGRKIGYIKSQKYKISEQNAKILSNEIFNYADKVSNIRCTI(MSE)REHKAKGRRLLQTVK (MSE)PS ; _entity_poly.pdbx_seq_one_letter_code_can ;MAHHHHHHMLIPAEQLPPLKEEEVIEKIENDACIQKSLEKIRALSKLIYNNPEILEQDISHINANPKMGRELSERIINSP KSIGRLKGRKIGYIKSQKYKISEQNAKILSNEIFNYADKVSNIRCTIMREHKAKGRRLLQTVKMPS ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier SSGCID-BaroA.17330.c # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 ALA n 1 3 HIS n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 MSE n 1 10 LEU n 1 11 ILE n 1 12 PRO n 1 13 ALA n 1 14 GLU n 1 15 GLN n 1 16 LEU n 1 17 PRO n 1 18 PRO n 1 19 LEU n 1 20 LYS n 1 21 GLU n 1 22 GLU n 1 23 GLU n 1 24 VAL n 1 25 ILE n 1 26 GLU n 1 27 LYS n 1 28 ILE n 1 29 GLU n 1 30 ASN n 1 31 ASP n 1 32 ALA n 1 33 CYS n 1 34 ILE n 1 35 GLN n 1 36 LYS n 1 37 SER n 1 38 LEU n 1 39 GLU n 1 40 LYS n 1 41 ILE n 1 42 ARG n 1 43 ALA n 1 44 LEU n 1 45 SER n 1 46 LYS n 1 47 LEU n 1 48 ILE n 1 49 TYR n 1 50 ASN n 1 51 ASN n 1 52 PRO n 1 53 GLU n 1 54 ILE n 1 55 LEU n 1 56 GLU n 1 57 GLN n 1 58 ASP n 1 59 ILE n 1 60 SER n 1 61 HIS n 1 62 ILE n 1 63 ASN n 1 64 ALA n 1 65 ASN n 1 66 PRO n 1 67 LYS n 1 68 MSE n 1 69 GLY n 1 70 ARG n 1 71 GLU n 1 72 LEU n 1 73 SER n 1 74 GLU n 1 75 ARG n 1 76 ILE n 1 77 ILE n 1 78 ASN n 1 79 SER n 1 80 PRO n 1 81 LYS n 1 82 SER n 1 83 ILE n 1 84 GLY n 1 85 ARG n 1 86 LEU n 1 87 LYS n 1 88 GLY n 1 89 ARG n 1 90 LYS n 1 91 ILE n 1 92 GLY n 1 93 TYR n 1 94 ILE n 1 95 LYS n 1 96 SER n 1 97 GLN n 1 98 LYS n 1 99 TYR n 1 100 LYS n 1 101 ILE n 1 102 SER n 1 103 GLU n 1 104 GLN n 1 105 ASN n 1 106 ALA n 1 107 LYS n 1 108 ILE n 1 109 LEU n 1 110 SER n 1 111 ASN n 1 112 GLU n 1 113 ILE n 1 114 PHE n 1 115 ASN n 1 116 TYR n 1 117 ALA n 1 118 ASP n 1 119 LYS n 1 120 VAL n 1 121 SER n 1 122 ASN n 1 123 ILE n 1 124 ARG n 1 125 CYS n 1 126 THR n 1 127 ILE n 1 128 MSE n 1 129 ARG n 1 130 GLU n 1 131 HIS n 1 132 LYS n 1 133 ALA n 1 134 LYS n 1 135 GLY n 1 136 ARG n 1 137 ARG n 1 138 LEU n 1 139 LEU n 1 140 GLN n 1 141 THR n 1 142 VAL n 1 143 LYS n 1 144 MSE n 1 145 PRO n 1 146 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 146 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'BARRO_50054, O99_01278' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Bartonella rochalimae ATCC BAA-1498' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 685782 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name BaroA.17330.c.B4 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 289 ? ? ? A . n A 1 2 ALA 2 290 ? ? ? A . n A 1 3 HIS 3 291 ? ? ? A . n A 1 4 HIS 4 292 ? ? ? A . n A 1 5 HIS 5 293 ? ? ? A . n A 1 6 HIS 6 294 ? ? ? A . n A 1 7 HIS 7 295 ? ? ? A . n A 1 8 HIS 8 296 ? ? ? A . n A 1 9 MSE 9 297 297 MSE MSE A . n A 1 10 LEU 10 298 298 LEU LEU A . n A 1 11 ILE 11 299 299 ILE ILE A . n A 1 12 PRO 12 300 300 PRO PRO A . n A 1 13 ALA 13 301 301 ALA ALA A . n A 1 14 GLU 14 302 302 GLU GLU A . n A 1 15 GLN 15 303 303 GLN GLN A . n A 1 16 LEU 16 304 304 LEU LEU A . n A 1 17 PRO 17 305 305 PRO PRO A . n A 1 18 PRO 18 306 306 PRO PRO A . n A 1 19 LEU 19 307 307 LEU LEU A . n A 1 20 LYS 20 308 308 LYS LYS A . n A 1 21 GLU 21 309 309 GLU GLU A . n A 1 22 GLU 22 310 310 GLU GLU A . n A 1 23 GLU 23 311 311 GLU GLU A . n A 1 24 VAL 24 312 312 VAL VAL A . n A 1 25 ILE 25 313 313 ILE ILE A . n A 1 26 GLU 26 314 314 GLU GLU A . n A 1 27 LYS 27 315 315 LYS LYS A . n A 1 28 ILE 28 316 316 ILE ILE A . n A 1 29 GLU 29 317 317 GLU GLU A . n A 1 30 ASN 30 318 318 ASN ASN A . n A 1 31 ASP 31 319 319 ASP ASP A . n A 1 32 ALA 32 320 320 ALA ALA A . n A 1 33 CYS 33 321 321 CYS CYS A . n A 1 34 ILE 34 322 322 ILE ILE A . n A 1 35 GLN 35 323 323 GLN GLN A . n A 1 36 LYS 36 324 324 LYS LYS A . n A 1 37 SER 37 325 325 SER SER A . n A 1 38 LEU 38 326 326 LEU LEU A . n A 1 39 GLU 39 327 327 GLU GLU A . n A 1 40 LYS 40 328 328 LYS LYS A . n A 1 41 ILE 41 329 329 ILE ILE A . n A 1 42 ARG 42 330 330 ARG ARG A . n A 1 43 ALA 43 331 331 ALA ALA A . n A 1 44 LEU 44 332 332 LEU LEU A . n A 1 45 SER 45 333 333 SER SER A . n A 1 46 LYS 46 334 334 LYS LYS A . n A 1 47 LEU 47 335 335 LEU LEU A . n A 1 48 ILE 48 336 336 ILE ILE A . n A 1 49 TYR 49 337 337 TYR TYR A . n A 1 50 ASN 50 338 338 ASN ASN A . n A 1 51 ASN 51 339 339 ASN ASN A . n A 1 52 PRO 52 340 340 PRO PRO A . n A 1 53 GLU 53 341 341 GLU GLU A . n A 1 54 ILE 54 342 342 ILE ILE A . n A 1 55 LEU 55 343 343 LEU LEU A . n A 1 56 GLU 56 344 344 GLU GLU A . n A 1 57 GLN 57 345 345 GLN GLN A . n A 1 58 ASP 58 346 346 ASP ASP A . n A 1 59 ILE 59 347 347 ILE ILE A . n A 1 60 SER 60 348 348 SER SER A . n A 1 61 HIS 61 349 349 HIS HIS A . n A 1 62 ILE 62 350 350 ILE ILE A . n A 1 63 ASN 63 351 351 ASN ASN A . n A 1 64 ALA 64 352 352 ALA ALA A . n A 1 65 ASN 65 353 353 ASN ASN A . n A 1 66 PRO 66 354 354 PRO PRO A . n A 1 67 LYS 67 355 355 LYS LYS A . n A 1 68 MSE 68 356 356 MSE MSE A . n A 1 69 GLY 69 357 357 GLY GLY A . n A 1 70 ARG 70 358 358 ARG ARG A . n A 1 71 GLU 71 359 359 GLU GLU A . n A 1 72 LEU 72 360 360 LEU LEU A . n A 1 73 SER 73 361 361 SER SER A . n A 1 74 GLU 74 362 362 GLU GLU A . n A 1 75 ARG 75 363 363 ARG ARG A . n A 1 76 ILE 76 364 364 ILE ILE A . n A 1 77 ILE 77 365 365 ILE ILE A . n A 1 78 ASN 78 366 366 ASN ASN A . n A 1 79 SER 79 367 367 SER SER A . n A 1 80 PRO 80 368 368 PRO PRO A . n A 1 81 LYS 81 369 369 LYS LYS A . n A 1 82 SER 82 370 370 SER SER A . n A 1 83 ILE 83 371 371 ILE ILE A . n A 1 84 GLY 84 372 372 GLY GLY A . n A 1 85 ARG 85 373 373 ARG ARG A . n A 1 86 LEU 86 374 374 LEU LEU A . n A 1 87 LYS 87 375 375 LYS LYS A . n A 1 88 GLY 88 376 376 GLY GLY A . n A 1 89 ARG 89 377 377 ARG ARG A . n A 1 90 LYS 90 378 378 LYS LYS A . n A 1 91 ILE 91 379 379 ILE ILE A . n A 1 92 GLY 92 380 380 GLY GLY A . n A 1 93 TYR 93 381 381 TYR TYR A . n A 1 94 ILE 94 382 382 ILE ILE A . n A 1 95 LYS 95 383 383 LYS LYS A . n A 1 96 SER 96 384 384 SER SER A . n A 1 97 GLN 97 385 385 GLN GLN A . n A 1 98 LYS 98 386 386 LYS LYS A . n A 1 99 TYR 99 387 387 TYR TYR A . n A 1 100 LYS 100 388 388 LYS LYS A . n A 1 101 ILE 101 389 389 ILE ILE A . n A 1 102 SER 102 390 390 SER SER A . n A 1 103 GLU 103 391 391 GLU GLU A . n A 1 104 GLN 104 392 392 GLN GLN A . n A 1 105 ASN 105 393 393 ASN ASN A . n A 1 106 ALA 106 394 394 ALA ALA A . n A 1 107 LYS 107 395 395 LYS LYS A . n A 1 108 ILE 108 396 396 ILE ILE A . n A 1 109 LEU 109 397 397 LEU LEU A . n A 1 110 SER 110 398 398 SER SER A . n A 1 111 ASN 111 399 399 ASN ASN A . n A 1 112 GLU 112 400 400 GLU GLU A . n A 1 113 ILE 113 401 401 ILE ILE A . n A 1 114 PHE 114 402 402 PHE PHE A . n A 1 115 ASN 115 403 403 ASN ASN A . n A 1 116 TYR 116 404 404 TYR TYR A . n A 1 117 ALA 117 405 405 ALA ALA A . n A 1 118 ASP 118 406 406 ASP ASP A . n A 1 119 LYS 119 407 407 LYS LYS A . n A 1 120 VAL 120 408 408 VAL VAL A . n A 1 121 SER 121 409 409 SER SER A . n A 1 122 ASN 122 410 410 ASN ASN A . n A 1 123 ILE 123 411 411 ILE ILE A . n A 1 124 ARG 124 412 412 ARG ARG A . n A 1 125 CYS 125 413 413 CYS CYS A . n A 1 126 THR 126 414 414 THR THR A . n A 1 127 ILE 127 415 415 ILE ILE A . n A 1 128 MSE 128 416 416 MSE MSE A . n A 1 129 ARG 129 417 417 ARG ARG A . n A 1 130 GLU 130 418 418 GLU GLU A . n A 1 131 HIS 131 419 419 HIS HIS A . n A 1 132 LYS 132 420 420 LYS LYS A . n A 1 133 ALA 133 421 421 ALA ALA A . n A 1 134 LYS 134 422 422 LYS LYS A . n A 1 135 GLY 135 423 423 GLY GLY A . n A 1 136 ARG 136 424 424 ARG ARG A . n A 1 137 ARG 137 425 425 ARG ARG A . n A 1 138 LEU 138 426 426 LEU LEU A . n A 1 139 LEU 139 427 427 LEU LEU A . n A 1 140 GLN 140 428 428 GLN GLN A . n A 1 141 THR 141 429 429 THR THR A . n A 1 142 VAL 142 430 430 VAL VAL A . n A 1 143 LYS 143 431 431 LYS LYS A . n A 1 144 MSE 144 432 432 MSE MSE A . n A 1 145 PRO 145 433 433 PRO PRO A . n A 1 146 SER 146 434 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 501 83 HOH HOH A . B 2 HOH 2 502 92 HOH HOH A . B 2 HOH 3 503 69 HOH HOH A . B 2 HOH 4 504 34 HOH HOH A . B 2 HOH 5 505 93 HOH HOH A . B 2 HOH 6 506 12 HOH HOH A . B 2 HOH 7 507 81 HOH HOH A . B 2 HOH 8 508 3 HOH HOH A . B 2 HOH 9 509 2 HOH HOH A . B 2 HOH 10 510 16 HOH HOH A . B 2 HOH 11 511 48 HOH HOH A . B 2 HOH 12 512 74 HOH HOH A . B 2 HOH 13 513 35 HOH HOH A . B 2 HOH 14 514 33 HOH HOH A . B 2 HOH 15 515 5 HOH HOH A . B 2 HOH 16 516 8 HOH HOH A . B 2 HOH 17 517 38 HOH HOH A . B 2 HOH 18 518 21 HOH HOH A . B 2 HOH 19 519 13 HOH HOH A . B 2 HOH 20 520 10 HOH HOH A . B 2 HOH 21 521 45 HOH HOH A . B 2 HOH 22 522 9 HOH HOH A . B 2 HOH 23 523 11 HOH HOH A . B 2 HOH 24 524 49 HOH HOH A . B 2 HOH 25 525 41 HOH HOH A . B 2 HOH 26 526 99 HOH HOH A . B 2 HOH 27 527 24 HOH HOH A . B 2 HOH 28 528 37 HOH HOH A . B 2 HOH 29 529 63 HOH HOH A . B 2 HOH 30 530 56 HOH HOH A . B 2 HOH 31 531 27 HOH HOH A . B 2 HOH 32 532 40 HOH HOH A . B 2 HOH 33 533 4 HOH HOH A . B 2 HOH 34 534 53 HOH HOH A . B 2 HOH 35 535 29 HOH HOH A . B 2 HOH 36 536 23 HOH HOH A . B 2 HOH 37 537 1 HOH HOH A . B 2 HOH 38 538 77 HOH HOH A . B 2 HOH 39 539 68 HOH HOH A . B 2 HOH 40 540 65 HOH HOH A . B 2 HOH 41 541 97 HOH HOH A . B 2 HOH 42 542 51 HOH HOH A . B 2 HOH 43 543 54 HOH HOH A . B 2 HOH 44 544 50 HOH HOH A . B 2 HOH 45 545 84 HOH HOH A . B 2 HOH 46 546 59 HOH HOH A . B 2 HOH 47 547 64 HOH HOH A . B 2 HOH 48 548 6 HOH HOH A . B 2 HOH 49 549 7 HOH HOH A . B 2 HOH 50 550 14 HOH HOH A . B 2 HOH 51 551 15 HOH HOH A . B 2 HOH 52 552 17 HOH HOH A . B 2 HOH 53 553 18 HOH HOH A . B 2 HOH 54 554 19 HOH HOH A . B 2 HOH 55 555 20 HOH HOH A . B 2 HOH 56 556 22 HOH HOH A . B 2 HOH 57 557 25 HOH HOH A . B 2 HOH 58 558 26 HOH HOH A . B 2 HOH 59 559 28 HOH HOH A . B 2 HOH 60 560 30 HOH HOH A . B 2 HOH 61 561 31 HOH HOH A . B 2 HOH 62 562 32 HOH HOH A . B 2 HOH 63 563 36 HOH HOH A . B 2 HOH 64 564 39 HOH HOH A . B 2 HOH 65 565 42 HOH HOH A . B 2 HOH 66 566 43 HOH HOH A . B 2 HOH 67 567 44 HOH HOH A . B 2 HOH 68 568 46 HOH HOH A . B 2 HOH 69 569 47 HOH HOH A . B 2 HOH 70 570 52 HOH HOH A . B 2 HOH 71 571 55 HOH HOH A . B 2 HOH 72 572 57 HOH HOH A . B 2 HOH 73 573 58 HOH HOH A . B 2 HOH 74 574 60 HOH HOH A . B 2 HOH 75 575 61 HOH HOH A . B 2 HOH 76 576 62 HOH HOH A . B 2 HOH 77 577 66 HOH HOH A . B 2 HOH 78 578 67 HOH HOH A . B 2 HOH 79 579 70 HOH HOH A . B 2 HOH 80 580 71 HOH HOH A . B 2 HOH 81 581 72 HOH HOH A . B 2 HOH 82 582 73 HOH HOH A . B 2 HOH 83 583 75 HOH HOH A . B 2 HOH 84 584 76 HOH HOH A . B 2 HOH 85 585 78 HOH HOH A . B 2 HOH 86 586 79 HOH HOH A . B 2 HOH 87 587 80 HOH HOH A . B 2 HOH 88 588 82 HOH HOH A . B 2 HOH 89 589 85 HOH HOH A . B 2 HOH 90 590 86 HOH HOH A . B 2 HOH 91 591 87 HOH HOH A . B 2 HOH 92 592 88 HOH HOH A . B 2 HOH 93 593 89 HOH HOH A . B 2 HOH 94 594 90 HOH HOH A . B 2 HOH 95 595 91 HOH HOH A . B 2 HOH 96 596 94 HOH HOH A . B 2 HOH 97 597 95 HOH HOH A . B 2 HOH 98 598 96 HOH HOH A . B 2 HOH 99 599 98 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LEU 304 ? CG ? A LEU 16 CG 2 1 Y 1 A LEU 304 ? CD1 ? A LEU 16 CD1 3 1 Y 1 A LEU 304 ? CD2 ? A LEU 16 CD2 4 1 Y 1 A LYS 308 ? CG ? A LYS 20 CG 5 1 Y 1 A LYS 308 ? CD ? A LYS 20 CD 6 1 Y 1 A LYS 308 ? CE ? A LYS 20 CE 7 1 Y 1 A LYS 308 ? NZ ? A LYS 20 NZ 8 1 Y 1 A GLU 314 ? CG ? A GLU 26 CG 9 1 Y 1 A GLU 314 ? CD ? A GLU 26 CD 10 1 Y 1 A GLU 314 ? OE1 ? A GLU 26 OE1 11 1 Y 1 A GLU 314 ? OE2 ? A GLU 26 OE2 12 1 Y 1 A LYS 324 ? CG ? A LYS 36 CG 13 1 Y 1 A LYS 324 ? CD ? A LYS 36 CD 14 1 Y 1 A LYS 324 ? CE ? A LYS 36 CE 15 1 Y 1 A LYS 324 ? NZ ? A LYS 36 NZ 16 1 Y 1 A GLU 327 ? CG ? A GLU 39 CG 17 1 Y 1 A GLU 327 ? CD ? A GLU 39 CD 18 1 Y 1 A GLU 327 ? OE1 ? A GLU 39 OE1 19 1 Y 1 A GLU 327 ? OE2 ? A GLU 39 OE2 20 1 Y 1 A LYS 328 ? CG ? A LYS 40 CG 21 1 Y 1 A LYS 328 ? CD ? A LYS 40 CD 22 1 Y 1 A LYS 328 ? CE ? A LYS 40 CE 23 1 Y 1 A LYS 328 ? NZ ? A LYS 40 NZ 24 1 Y 1 A HIS 349 ? CG ? A HIS 61 CG 25 1 Y 1 A HIS 349 ? ND1 ? A HIS 61 ND1 26 1 Y 1 A HIS 349 ? CD2 ? A HIS 61 CD2 27 1 Y 1 A HIS 349 ? CE1 ? A HIS 61 CE1 28 1 Y 1 A HIS 349 ? NE2 ? A HIS 61 NE2 29 1 Y 1 A LYS 355 ? CG ? A LYS 67 CG 30 1 Y 1 A LYS 355 ? CD ? A LYS 67 CD 31 1 Y 1 A LYS 355 ? CE ? A LYS 67 CE 32 1 Y 1 A LYS 355 ? NZ ? A LYS 67 NZ 33 1 Y 1 A MSE 416 ? CG ? A MSE 128 CG 34 1 Y 1 A MSE 416 ? SE ? A MSE 128 SE 35 1 Y 1 A MSE 416 ? CE ? A MSE 128 CE 36 1 Y 1 A ARG 417 ? CG ? A ARG 129 CG 37 1 Y 1 A ARG 417 ? CD ? A ARG 129 CD 38 1 Y 1 A ARG 417 ? NE ? A ARG 129 NE 39 1 Y 1 A ARG 417 ? CZ ? A ARG 129 CZ 40 1 Y 1 A ARG 417 ? NH1 ? A ARG 129 NH1 41 1 Y 1 A ARG 417 ? NH2 ? A ARG 129 NH2 42 1 Y 1 A LYS 420 ? CG ? A LYS 132 CG 43 1 Y 1 A LYS 420 ? CD ? A LYS 132 CD 44 1 Y 1 A LYS 420 ? CE ? A LYS 132 CE 45 1 Y 1 A LYS 420 ? NZ ? A LYS 132 NZ 46 1 Y 1 A LYS 422 ? CG ? A LYS 134 CG 47 1 Y 1 A LYS 422 ? CD ? A LYS 134 CD 48 1 Y 1 A LYS 422 ? CE ? A LYS 134 CE 49 1 Y 1 A LYS 422 ? NZ ? A LYS 134 NZ 50 1 Y 1 A LYS 431 ? CG ? A LYS 143 CG 51 1 Y 1 A LYS 431 ? CD ? A LYS 143 CD 52 1 Y 1 A LYS 431 ? CE ? A LYS 143 CE 53 1 Y 1 A LYS 431 ? NZ ? A LYS 143 NZ # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XSCALE ? ? ? . 1 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 2 ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . 3 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.15 4 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 5 ? 'model building' ? ? ? ? ? ? ? ? ? ? ? ARP ? ? ? . 6 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 4YK1 _cell.details ? _cell.formula_units_Z ? _cell.length_a 79.250 _cell.length_a_esd ? _cell.length_b 79.250 _cell.length_b_esd ? _cell.length_c 85.970 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 4YK1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 91 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 2 2' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 4YK1 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 3.93 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 68.67 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 289 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;1:1 19.68 mg/mL protein and MCSG3(a1) (0.1 M sodium cacodylate/HCl, pH 6.5, 1 M sodium citrate tribasic), cryoprotectant: 20% ethylene glycol ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'RAYONIX MX-300' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2015-02-01 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator 'double crystal Si(111)' _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.979490 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'CLSI BEAMLINE 08ID-1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.979490 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 08ID-1 _diffrn_source.pdbx_synchrotron_site CLSI # _reflns.B_iso_Wilson_estimate 30.340 _reflns.entry_id 4YK1 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.100 _reflns.d_resolution_low 50 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all 16573 _reflns.number_obs 16570 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I -3.000 _reflns.percent_possible_obs 100.000 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs 1.000 _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 15.5 _reflns.pdbx_Rmerge_I_obs 0.070 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 29.980 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared 1.005 _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.072 _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all 473778 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_R_split 2.100 2.150 ? 5.320 ? 34684 2237 ? 2236 100.000 ? ? 0.945 ? 0.582 ? ? ? ? ? ? ? ? ? ? ? ? ? 0.601 ? 0 1 1 ? ? 2.150 2.210 ? 6.830 ? 34426 2215 ? 2215 100.000 ? ? 0.967 ? 0.450 ? ? ? ? ? ? ? ? ? ? ? ? ? 0.465 ? 0 2 1 ? ? 2.210 2.280 ? 7.890 ? 33431 2149 ? 2149 100.000 ? ? 0.974 ? 0.396 ? ? ? ? ? ? ? ? ? ? ? ? ? 0.410 ? 0 3 1 ? ? 2.280 2.350 ? 9.870 ? 32597 2095 ? 2095 100.000 ? ? 0.981 ? 0.314 ? ? ? ? ? ? ? ? ? ? ? ? ? 0.325 ? 0 4 1 ? ? 2.350 2.420 ? 13.080 ? 30990 1986 ? 1986 100.000 ? ? 0.990 ? 0.237 ? ? ? ? ? ? ? ? ? ? ? ? ? 0.245 ? 0 5 1 ? ? 2.420 2.510 ? 14.610 ? 30348 1944 ? 1944 100.000 ? ? 0.993 ? 0.210 ? ? ? ? ? ? ? ? ? ? ? ? ? 0.217 ? 0 6 1 ? ? 2.510 2.600 ? 17.360 ? 29659 1897 ? 1897 100.000 ? ? 0.994 ? 0.173 ? ? ? ? ? ? ? ? ? ? ? ? ? 0.179 ? 0 7 1 ? ? 2.600 2.710 ? 20.430 ? 28327 1811 ? 1811 100.000 ? ? 0.996 ? 0.144 ? ? ? ? ? ? ? ? ? ? ? ? ? 0.149 ? 0 8 1 ? ? 2.710 2.830 ? 23.900 ? 27179 1734 ? 1734 100.000 ? ? 0.997 ? 0.122 ? ? ? ? ? ? ? ? ? ? ? ? ? 0.126 ? 0 9 1 ? ? 2.830 2.970 ? 31.110 ? 25863 1649 ? 1649 100.000 ? ? 0.998 ? 0.089 ? ? ? ? ? ? ? ? ? ? ? ? ? 0.092 ? 0 10 1 ? ? 2.970 3.130 ? 37.610 ? 24903 1589 ? 1589 100.000 ? ? 0.999 ? 0.072 ? ? ? ? ? ? ? ? ? ? ? ? ? 0.074 ? 0 11 1 ? ? 3.130 3.320 ? 43.910 ? 23399 1498 ? 1498 100.000 ? ? 0.999 ? 0.059 ? ? ? ? ? ? ? ? ? ? ? ? ? 0.061 ? 0 12 1 ? ? 3.320 3.550 ? 53.660 ? 21930 1411 ? 1411 100.000 ? ? 0.999 ? 0.049 ? ? ? ? ? ? ? ? ? ? ? ? ? 0.050 ? 0 13 1 ? ? 3.550 3.830 ? 60.490 ? 19962 1299 ? 1299 100.000 ? ? 1.000 ? 0.042 ? ? ? ? ? ? ? ? ? ? ? ? ? 0.044 ? 0 14 1 ? ? 3.830 4.200 ? 65.950 ? 18515 1204 ? 1204 100.000 ? ? 1.000 ? 0.038 ? ? ? ? ? ? ? ? ? ? ? ? ? 0.039 ? 0 15 1 ? ? 4.200 4.700 ? 74.040 ? 16844 1092 ? 1092 100.000 ? ? 1.000 ? 0.032 ? ? ? ? ? ? ? ? ? ? ? ? ? 0.033 ? 0 16 1 ? ? 4.700 5.420 ? 69.440 ? 14512 951 ? 951 100.000 ? ? 1.000 ? 0.033 ? ? ? ? ? ? ? ? ? ? ? ? ? 0.034 ? 0 17 1 ? ? 5.420 6.640 ? 64.760 ? 12263 817 ? 817 100.000 ? ? 1.000 ? 0.035 ? ? ? ? ? ? ? ? ? ? ? ? ? 0.036 ? 0 18 1 ? ? 6.640 9.390 ? 75.220 ? 9267 626 ? 626 100.000 ? ? 1.000 ? 0.028 ? ? ? ? ? ? ? ? ? ? ? ? ? 0.029 ? 0 19 1 ? ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max 140.050 _refine.B_iso_mean 42.5497 _refine.B_iso_min 16.830 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 4YK1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.1000 _refine.ls_d_res_low 46.9450 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 16570 _refine.ls_number_reflns_R_free 813 _refine.ls_number_reflns_R_work 29027 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 100.0000 _refine.ls_percent_reflns_R_free 4.9700 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1784 _refine.ls_R_factor_R_free 0.2031 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1771 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.580 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 19.9900 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.1600 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 2.1000 _refine_hist.d_res_low 46.9450 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 99 _refine_hist.number_atoms_total 1152 _refine_hist.pdbx_number_residues_total 137 _refine_hist.pdbx_B_iso_mean_solvent 46.37 _refine_hist.pdbx_number_atoms_protein 1053 _refine_hist.pdbx_number_atoms_nucleic_acid 0 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.008 ? 1091 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.925 ? 1476 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.045 ? 171 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.004 ? 194 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 14.503 ? 437 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.1001 2.1678 2755 . 107 2648 100.0000 . . . 0.2269 . 0.2006 . . . . . . 11 . . . 'X-RAY DIFFRACTION' 2.1678 2.2453 2795 . 131 2664 100.0000 . . . 0.2280 . 0.1822 . . . . . . 11 . . . 'X-RAY DIFFRACTION' 2.2453 2.3352 2777 . 103 2674 100.0000 . . . 0.2313 . 0.1844 . . . . . . 11 . . . 'X-RAY DIFFRACTION' 2.3352 2.4415 2771 . 129 2642 100.0000 . . . 0.2196 . 0.1731 . . . . . . 11 . . . 'X-RAY DIFFRACTION' 2.4415 2.5702 2778 . 170 2608 100.0000 . . . 0.2295 . 0.1753 . . . . . . 11 . . . 'X-RAY DIFFRACTION' 2.5702 2.7312 2780 . 148 2632 100.0000 . . . 0.2199 . 0.1829 . . . . . . 11 . . . 'X-RAY DIFFRACTION' 2.7312 2.9421 2782 . 120 2662 100.0000 . . . 0.2506 . 0.1967 . . . . . . 11 . . . 'X-RAY DIFFRACTION' 2.9421 3.2381 2761 . 151 2610 100.0000 . . . 0.2458 . 0.2009 . . . . . . 11 . . . 'X-RAY DIFFRACTION' 3.2381 3.7065 2771 . 163 2608 100.0000 . . . 0.1877 . 0.1811 . . . . . . 11 . . . 'X-RAY DIFFRACTION' 3.7065 4.6691 2797 . 172 2625 100.0000 . . . 0.1674 . 0.1415 . . . . . . 11 . . . 'X-RAY DIFFRACTION' 4.6691 46.9572 2777 . 123 2654 100.0000 . . . 0.1874 . 0.1813 . . . . . . 11 . . . # _struct.entry_id 4YK1 _struct.title 'Crystal Structure of the BID Domain of Bep6 from Bartonella rochalimae' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 4YK1 _struct_keywords.text ;SSGCID, Bartonella rochalimae, Bep6, VirB-translocated Bartonella effector protein, BID domain, Structural Genomics, Seattle Structural Genomics Center for Infectious Disease, PROTEIN BINDING ; _struct_keywords.pdbx_keywords 'PROTEIN BINDING' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code E6YLF3_9RHIZ _struct_ref.pdbx_db_accession E6YLF3 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;LIPAEQLPPLKEEEVIEKIENDACIQKSLEKIRALSKLIYNNPEILEQDISHINANPKMGRELSERIINSPKSIGRLKGR KIGYIKSQKYKISEQNAKILSNEIFNYADKVSNIRCTIMREHKAKGRRLLQTVKMPS ; _struct_ref.pdbx_align_begin 298 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4YK1 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 10 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 146 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession E6YLF3 _struct_ref_seq.db_align_beg 298 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 434 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 298 _struct_ref_seq.pdbx_auth_seq_align_end 434 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4YK1 MSE A 1 ? UNP E6YLF3 ? ? 'expression tag' 289 1 1 4YK1 ALA A 2 ? UNP E6YLF3 ? ? 'expression tag' 290 2 1 4YK1 HIS A 3 ? UNP E6YLF3 ? ? 'expression tag' 291 3 1 4YK1 HIS A 4 ? UNP E6YLF3 ? ? 'expression tag' 292 4 1 4YK1 HIS A 5 ? UNP E6YLF3 ? ? 'expression tag' 293 5 1 4YK1 HIS A 6 ? UNP E6YLF3 ? ? 'expression tag' 294 6 1 4YK1 HIS A 7 ? UNP E6YLF3 ? ? 'expression tag' 295 7 1 4YK1 HIS A 8 ? UNP E6YLF3 ? ? 'expression tag' 296 8 1 4YK1 MSE A 9 ? UNP E6YLF3 ? ? 'expression tag' 297 9 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 0 ? 1 MORE 0 ? 1 'SSA (A^2)' 9330 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ILE A 11 ? LEU A 16 ? ILE A 299 LEU A 304 5 ? 6 HELX_P HELX_P2 AA2 LYS A 20 ? ASP A 31 ? LYS A 308 ASP A 319 1 ? 12 HELX_P HELX_P3 AA3 ASP A 31 ? ASN A 50 ? ASP A 319 ASN A 338 1 ? 20 HELX_P HELX_P4 AA4 LEU A 55 ? ASN A 65 ? LEU A 343 ASN A 353 1 ? 11 HELX_P HELX_P5 AA5 PRO A 66 ? SER A 79 ? PRO A 354 SER A 367 1 ? 14 HELX_P HELX_P6 AA6 PRO A 80 ? ILE A 83 ? PRO A 368 ILE A 371 5 ? 4 HELX_P HELX_P7 AA7 SER A 96 ? THR A 141 ? SER A 384 THR A 429 1 ? 46 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A MSE 9 C ? ? ? 1_555 A LEU 10 N ? ? A MSE 297 A LEU 298 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale2 covale both ? A LYS 67 C ? ? ? 1_555 A MSE 68 N A ? A LYS 355 A MSE 356 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale3 covale both ? A LYS 67 C ? ? ? 1_555 A MSE 68 N B ? A LYS 355 A MSE 356 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale4 covale both ? A MSE 68 C A ? ? 1_555 A GLY 69 N ? ? A MSE 356 A GLY 357 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale5 covale both ? A MSE 68 C B ? ? 1_555 A GLY 69 N ? ? A MSE 356 A GLY 357 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale6 covale both ? A ILE 127 C ? ? ? 1_555 A MSE 128 N ? ? A ILE 415 A MSE 416 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale7 covale both ? A MSE 128 C ? ? ? 1_555 A ARG 129 N ? ? A MSE 416 A ARG 417 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale8 covale both ? A LYS 143 C ? ? ? 1_555 A MSE 144 N ? ? A LYS 431 A MSE 432 1_555 ? ? ? ? ? ? ? 1.319 ? ? covale9 covale both ? A MSE 144 C ? ? ? 1_555 A PRO 145 N ? ? A MSE 432 A PRO 433 1_555 ? ? ? ? ? ? ? 1.347 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 MSE A 9 ? . . . . MSE A 297 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 2 MSE A 68 A . . . . MSE A 356 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 3 MSE A 68 B . . . . MSE A 356 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 4 MSE A 128 ? . . . . MSE A 416 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 5 MSE A 144 ? . . . . MSE A 432 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 2 _struct_sheet.details ? # _struct_sheet_order.sheet_id AA1 _struct_sheet_order.range_id_1 1 _struct_sheet_order.range_id_2 2 _struct_sheet_order.offset ? _struct_sheet_order.sense anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 LYS A 90 ? ILE A 91 ? LYS A 378 ILE A 379 AA1 2 ILE A 94 ? LYS A 95 ? ILE A 382 LYS A 383 # _pdbx_struct_sheet_hbond.sheet_id AA1 _pdbx_struct_sheet_hbond.range_id_1 1 _pdbx_struct_sheet_hbond.range_id_2 2 _pdbx_struct_sheet_hbond.range_1_label_atom_id N _pdbx_struct_sheet_hbond.range_1_label_comp_id ILE _pdbx_struct_sheet_hbond.range_1_label_asym_id A _pdbx_struct_sheet_hbond.range_1_label_seq_id 91 _pdbx_struct_sheet_hbond.range_1_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_1_auth_atom_id N _pdbx_struct_sheet_hbond.range_1_auth_comp_id ILE _pdbx_struct_sheet_hbond.range_1_auth_asym_id A _pdbx_struct_sheet_hbond.range_1_auth_seq_id 379 _pdbx_struct_sheet_hbond.range_2_label_atom_id O _pdbx_struct_sheet_hbond.range_2_label_comp_id ILE _pdbx_struct_sheet_hbond.range_2_label_asym_id A _pdbx_struct_sheet_hbond.range_2_label_seq_id 94 _pdbx_struct_sheet_hbond.range_2_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_2_auth_atom_id O _pdbx_struct_sheet_hbond.range_2_auth_comp_id ILE _pdbx_struct_sheet_hbond.range_2_auth_asym_id A _pdbx_struct_sheet_hbond.range_2_auth_seq_id 382 # _pdbx_entry_details.entry_id 4YK1 _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id SER _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 367 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -163.03 _pdbx_validate_torsion.psi 93.03 # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NIAID, National Institute of Allergy and Infectious Diseases' _pdbx_SG_project.full_name_of_center 'Seattle Structural Genomics Center for Infectious Disease' _pdbx_SG_project.initial_of_center SSGCID # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 68 A MSE 356 ? MET 'modified residue' 2 A MSE 128 A MSE 416 ? MET 'modified residue' 3 A MSE 144 A MSE 432 ? MET 'modified residue' # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 533 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id B _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # _diffrn_reflns.diffrn_id 1 _diffrn_reflns.pdbx_d_res_high 2.100 _diffrn_reflns.pdbx_d_res_low ? _diffrn_reflns.pdbx_number_obs 30542 _diffrn_reflns.pdbx_Rmerge_I_obs 0.070 _diffrn_reflns.pdbx_Rsym_value ? _diffrn_reflns.pdbx_chi_squared 1.00 _diffrn_reflns.pdbx_redundancy ? _diffrn_reflns.pdbx_rejects ? _diffrn_reflns.pdbx_percent_possible_obs 100.00 _diffrn_reflns.pdbx_observed_criterion ? _diffrn_reflns.number 473778 _diffrn_reflns.limit_h_max ? _diffrn_reflns.limit_h_min ? _diffrn_reflns.limit_k_max ? _diffrn_reflns.limit_k_min ? _diffrn_reflns.limit_l_max ? _diffrn_reflns.limit_l_min ? # loop_ _pdbx_diffrn_reflns_shell.diffrn_id _pdbx_diffrn_reflns_shell.d_res_high _pdbx_diffrn_reflns_shell.d_res_low _pdbx_diffrn_reflns_shell.number_obs _pdbx_diffrn_reflns_shell.rejects _pdbx_diffrn_reflns_shell.Rmerge_I_obs _pdbx_diffrn_reflns_shell.Rsym_value _pdbx_diffrn_reflns_shell.chi_squared _pdbx_diffrn_reflns_shell.redundancy _pdbx_diffrn_reflns_shell.percent_possible_obs 1 9.39 50 339 ? 0.028 ? ? ? ? 1 6.64 9.39 626 ? 0.028 ? ? ? ? 1 5.42 6.64 817 ? 0.035 ? ? ? ? 1 4.70 5.42 951 ? 0.033 ? ? ? ? 1 4.20 4.70 1092 ? 0.032 ? ? ? ? 1 3.83 4.20 1204 ? 0.038 ? ? ? ? 1 3.55 3.83 1299 ? 0.042 ? ? ? ? 1 3.32 3.55 1411 ? 0.049 ? ? ? ? 1 3.13 3.32 1498 ? 0.059 ? ? ? ? 1 2.97 3.13 1589 ? 0.072 ? ? ? ? 1 2.83 2.97 1649 ? 0.089 ? ? ? ? 1 2.71 2.83 1734 ? 0.122 ? ? ? ? 1 2.60 2.71 1811 ? 0.144 ? ? ? ? 1 2.51 2.60 1897 ? 0.173 ? ? ? ? 1 2.42 2.51 1944 ? 0.210 ? ? ? ? 1 2.35 2.42 1986 ? 0.237 ? ? ? ? 1 2.28 2.35 2095 ? 0.314 ? ? ? ? 1 2.21 2.28 2149 ? 0.396 ? ? ? ? 1 2.15 2.21 2215 ? 0.450 ? ? ? ? 1 2.10 2.15 2236 ? 0.582 ? ? ? ? # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'X-RAY DIFFRACTION' ? refined 30.7684 86.4492 5.3530 0.5439 ? -0.0573 ? -0.0665 ? 0.3127 ? 0.0571 ? 0.3716 ? 2.0620 ? -0.4740 ? -0.3023 ? 4.8582 ? -0.9006 ? 1.7353 ? -0.0913 ? -0.0600 ? -0.4658 ? -0.5415 ? 0.1805 ? 0.3439 ? 0.8348 ? -0.0152 ? -0.2221 ? 2 'X-RAY DIFFRACTION' ? refined 38.9214 100.5909 5.8351 0.2287 ? 0.0452 ? -0.0029 ? 0.2437 ? 0.0092 ? 0.1843 ? 5.1361 ? -1.0534 ? 0.7919 ? 8.2590 ? -5.6025 ? 4.4073 ? 0.0584 ? -0.2374 ? -0.2505 ? -0.4258 ? -0.1334 ? -0.3686 ? 0.6299 ? 0.5772 ? 0.0785 ? 3 'X-RAY DIFFRACTION' ? refined 29.3646 117.7033 -2.4998 0.1438 ? -0.0062 ? 0.0012 ? 0.2293 ? 0.0632 ? 0.2533 ? 5.0797 ? -4.2975 ? -0.1212 ? 4.0500 ? -1.2099 ? 4.0278 ? 0.2934 ? -0.0083 ? 0.2360 ? -0.3996 ? -0.2047 ? -0.2325 ? -0.0860 ? 0.1761 ? -0.1591 ? 4 'X-RAY DIFFRACTION' ? refined 31.7633 87.4352 13.6425 0.3378 ? -0.0122 ? -0.0344 ? 0.2629 ? 0.0511 ? 0.2716 ? 0.3637 ? -1.8001 ? 0.4619 ? 8.2950 ? -3.5193 ? 1.3178 ? -0.0319 ? 0.0006 ? -0.0564 ? -0.0253 ? 0.0209 ? 0.0889 ? 0.1238 ? 0.0333 ? 0.0213 ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 ? ? A 0 ? ? A 0 ? ;chain 'A' and (resid 297 through 353 ) ; 2 'X-RAY DIFFRACTION' 2 ? ? A 0 ? ? A 0 ? ;chain 'A' and (resid 354 through 370 ) ; 3 'X-RAY DIFFRACTION' 3 ? ? A 0 ? ? A 0 ? ;chain 'A' and (resid 371 through 384 ) ; 4 'X-RAY DIFFRACTION' 4 ? ? A 0 ? ? A 0 ? ;chain 'A' and (resid 385 through 433 ) ; # _phasing.method SAD # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MSE 289 ? A MSE 1 2 1 Y 1 A ALA 290 ? A ALA 2 3 1 Y 1 A HIS 291 ? A HIS 3 4 1 Y 1 A HIS 292 ? A HIS 4 5 1 Y 1 A HIS 293 ? A HIS 5 6 1 Y 1 A HIS 294 ? A HIS 6 7 1 Y 1 A HIS 295 ? A HIS 7 8 1 Y 1 A HIS 296 ? A HIS 8 9 1 Y 1 A SER 434 ? A SER 146 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MSE N N N N 230 MSE CA C N S 231 MSE C C N N 232 MSE O O N N 233 MSE OXT O N N 234 MSE CB C N N 235 MSE CG C N N 236 MSE SE SE N N 237 MSE CE C N N 238 MSE H H N N 239 MSE H2 H N N 240 MSE HA H N N 241 MSE HXT H N N 242 MSE HB2 H N N 243 MSE HB3 H N N 244 MSE HG2 H N N 245 MSE HG3 H N N 246 MSE HE1 H N N 247 MSE HE2 H N N 248 MSE HE3 H N N 249 PHE N N N N 250 PHE CA C N S 251 PHE C C N N 252 PHE O O N N 253 PHE CB C N N 254 PHE CG C Y N 255 PHE CD1 C Y N 256 PHE CD2 C Y N 257 PHE CE1 C Y N 258 PHE CE2 C Y N 259 PHE CZ C Y N 260 PHE OXT O N N 261 PHE H H N N 262 PHE H2 H N N 263 PHE HA H N N 264 PHE HB2 H N N 265 PHE HB3 H N N 266 PHE HD1 H N N 267 PHE HD2 H N N 268 PHE HE1 H N N 269 PHE HE2 H N N 270 PHE HZ H N N 271 PHE HXT H N N 272 PRO N N N N 273 PRO CA C N S 274 PRO C C N N 275 PRO O O N N 276 PRO CB C N N 277 PRO CG C N N 278 PRO CD C N N 279 PRO OXT O N N 280 PRO H H N N 281 PRO HA H N N 282 PRO HB2 H N N 283 PRO HB3 H N N 284 PRO HG2 H N N 285 PRO HG3 H N N 286 PRO HD2 H N N 287 PRO HD3 H N N 288 PRO HXT H N N 289 SER N N N N 290 SER CA C N S 291 SER C C N N 292 SER O O N N 293 SER CB C N N 294 SER OG O N N 295 SER OXT O N N 296 SER H H N N 297 SER H2 H N N 298 SER HA H N N 299 SER HB2 H N N 300 SER HB3 H N N 301 SER HG H N N 302 SER HXT H N N 303 THR N N N N 304 THR CA C N S 305 THR C C N N 306 THR O O N N 307 THR CB C N R 308 THR OG1 O N N 309 THR CG2 C N N 310 THR OXT O N N 311 THR H H N N 312 THR H2 H N N 313 THR HA H N N 314 THR HB H N N 315 THR HG1 H N N 316 THR HG21 H N N 317 THR HG22 H N N 318 THR HG23 H N N 319 THR HXT H N N 320 TYR N N N N 321 TYR CA C N S 322 TYR C C N N 323 TYR O O N N 324 TYR CB C N N 325 TYR CG C Y N 326 TYR CD1 C Y N 327 TYR CD2 C Y N 328 TYR CE1 C Y N 329 TYR CE2 C Y N 330 TYR CZ C Y N 331 TYR OH O N N 332 TYR OXT O N N 333 TYR H H N N 334 TYR H2 H N N 335 TYR HA H N N 336 TYR HB2 H N N 337 TYR HB3 H N N 338 TYR HD1 H N N 339 TYR HD2 H N N 340 TYR HE1 H N N 341 TYR HE2 H N N 342 TYR HH H N N 343 TYR HXT H N N 344 VAL N N N N 345 VAL CA C N S 346 VAL C C N N 347 VAL O O N N 348 VAL CB C N N 349 VAL CG1 C N N 350 VAL CG2 C N N 351 VAL OXT O N N 352 VAL H H N N 353 VAL H2 H N N 354 VAL HA H N N 355 VAL HB H N N 356 VAL HG11 H N N 357 VAL HG12 H N N 358 VAL HG13 H N N 359 VAL HG21 H N N 360 VAL HG22 H N N 361 VAL HG23 H N N 362 VAL HXT H N N 363 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MSE N CA sing N N 218 MSE N H sing N N 219 MSE N H2 sing N N 220 MSE CA C sing N N 221 MSE CA CB sing N N 222 MSE CA HA sing N N 223 MSE C O doub N N 224 MSE C OXT sing N N 225 MSE OXT HXT sing N N 226 MSE CB CG sing N N 227 MSE CB HB2 sing N N 228 MSE CB HB3 sing N N 229 MSE CG SE sing N N 230 MSE CG HG2 sing N N 231 MSE CG HG3 sing N N 232 MSE SE CE sing N N 233 MSE CE HE1 sing N N 234 MSE CE HE2 sing N N 235 MSE CE HE3 sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SER N CA sing N N 277 SER N H sing N N 278 SER N H2 sing N N 279 SER CA C sing N N 280 SER CA CB sing N N 281 SER CA HA sing N N 282 SER C O doub N N 283 SER C OXT sing N N 284 SER CB OG sing N N 285 SER CB HB2 sing N N 286 SER CB HB3 sing N N 287 SER OG HG sing N N 288 SER OXT HXT sing N N 289 THR N CA sing N N 290 THR N H sing N N 291 THR N H2 sing N N 292 THR CA C sing N N 293 THR CA CB sing N N 294 THR CA HA sing N N 295 THR C O doub N N 296 THR C OXT sing N N 297 THR CB OG1 sing N N 298 THR CB CG2 sing N N 299 THR CB HB sing N N 300 THR OG1 HG1 sing N N 301 THR CG2 HG21 sing N N 302 THR CG2 HG22 sing N N 303 THR CG2 HG23 sing N N 304 THR OXT HXT sing N N 305 TYR N CA sing N N 306 TYR N H sing N N 307 TYR N H2 sing N N 308 TYR CA C sing N N 309 TYR CA CB sing N N 310 TYR CA HA sing N N 311 TYR C O doub N N 312 TYR C OXT sing N N 313 TYR CB CG sing N N 314 TYR CB HB2 sing N N 315 TYR CB HB3 sing N N 316 TYR CG CD1 doub Y N 317 TYR CG CD2 sing Y N 318 TYR CD1 CE1 sing Y N 319 TYR CD1 HD1 sing N N 320 TYR CD2 CE2 doub Y N 321 TYR CD2 HD2 sing N N 322 TYR CE1 CZ doub Y N 323 TYR CE1 HE1 sing N N 324 TYR CE2 CZ sing Y N 325 TYR CE2 HE2 sing N N 326 TYR CZ OH sing N N 327 TYR OH HH sing N N 328 TYR OXT HXT sing N N 329 VAL N CA sing N N 330 VAL N H sing N N 331 VAL N H2 sing N N 332 VAL CA C sing N N 333 VAL CA CB sing N N 334 VAL CA HA sing N N 335 VAL C O doub N N 336 VAL C OXT sing N N 337 VAL CB CG1 sing N N 338 VAL CB CG2 sing N N 339 VAL CB HB sing N N 340 VAL CG1 HG11 sing N N 341 VAL CG1 HG12 sing N N 342 VAL CG1 HG13 sing N N 343 VAL CG2 HG21 sing N N 344 VAL CG2 HG22 sing N N 345 VAL CG2 HG23 sing N N 346 VAL OXT HXT sing N N 347 # _atom_sites.entry_id 4YK1 _atom_sites.fract_transf_matrix[1][1] 0.012618 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012618 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011632 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S SE # loop_