HEADER PROTEIN BINDING 03-MAR-15 4YK2 TITLE CRYSTAL STRUCTURE OF THE BID DOMAIN OF BEP9 FROM BARTONELLA TITLE 2 CLARRIDGEIAE COMPND MOL_ID: 1; COMPND 2 MOLECULE: BARTONELLA EFFECTOR PROTEIN (BEP) SUBSTRATE OF VIRB T4SS; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: BID DOMAIN (UNP RESIDUES 64-201); COMPND 5 SYNONYM: BEPE; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BARTONELLA CLARRIDGEIAE; SOURCE 3 ORGANISM_TAXID: 696125; SOURCE 4 STRAIN: CIP 104772 / 73; SOURCE 5 GENE: BARCL_1032; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: BACLA.17330.I.B2 KEYWDS SSGCID, BARTONELLA CLARRIDGEIAE, BEP9, VIRB-TRANSLOCATED BARTONELLA KEYWDS 2 EFFECTOR PROTEIN, BID DOMAIN, STRUCTURAL GENOMICS, SEATTLE KEYWDS 3 STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE (SSGCID) REVDAT 3 27-SEP-23 4YK2 1 REMARK REVDAT 2 11-JAN-17 4YK2 1 JRNL REVDAT 1 09-MAR-16 4YK2 0 JRNL AUTH F.V.STANGER,T.A.DE BEER,D.M.DRANOW,T.SCHIRMER,I.PHAN,C.DEHIO JRNL TITL THE BID DOMAIN OF TYPE IV SECRETION SUBSTRATES FORMS A JRNL TITL 2 CONSERVED FOUR-HELIX BUNDLE TOPPED WITH A HOOK. JRNL REF STRUCTURE V. 25 203 2017 JRNL REFN ISSN 1878-4186 JRNL PMID 27889208 JRNL DOI 10.1016/J.STR.2016.10.010 REMARK 2 REMARK 2 RESOLUTION. 2.05 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.05 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.84 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 21826 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.173 REMARK 3 R VALUE (WORKING SET) : 0.171 REMARK 3 FREE R VALUE : 0.214 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.960 REMARK 3 FREE R VALUE TEST SET COUNT : 1082 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.8562 - 4.0992 0.97 2692 136 0.1664 0.1741 REMARK 3 2 4.0992 - 3.2539 0.99 2621 133 0.1582 0.2064 REMARK 3 3 3.2539 - 2.8426 1.00 2593 141 0.1779 0.2658 REMARK 3 4 2.8426 - 2.5827 1.00 2601 131 0.1777 0.2211 REMARK 3 5 2.5827 - 2.3976 1.00 2561 142 0.1734 0.2260 REMARK 3 6 2.3976 - 2.2563 1.00 2569 135 0.1730 0.2189 REMARK 3 7 2.2563 - 2.1433 0.99 2544 130 0.1790 0.2312 REMARK 3 8 2.1433 - 2.0500 0.99 2563 134 0.2056 0.2446 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.780 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 28.30 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 37.24 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 1795 REMARK 3 ANGLE : 0.983 2426 REMARK 3 CHIRALITY : 0.046 267 REMARK 3 PLANARITY : 0.004 316 REMARK 3 DIHEDRAL : 14.470 701 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 73 THROUGH 103 ) REMARK 3 ORIGIN FOR THE GROUP (A): 35.5144 35.7765 -14.2421 REMARK 3 T TENSOR REMARK 3 T11: 0.2895 T22: 0.2647 REMARK 3 T33: 0.2013 T12: 0.0322 REMARK 3 T13: 0.0185 T23: 0.0199 REMARK 3 L TENSOR REMARK 3 L11: 0.2880 L22: 0.2739 REMARK 3 L33: 0.4703 L12: 0.1362 REMARK 3 L13: -0.1820 L23: 0.2775 REMARK 3 S TENSOR REMARK 3 S11: -0.1146 S12: 0.3562 S13: 0.0176 REMARK 3 S21: -0.2173 S22: 0.1507 S23: -0.1710 REMARK 3 S31: 0.0952 S32: 0.3185 S33: -0.0230 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 104 THROUGH 150 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.2920 41.8928 3.6984 REMARK 3 T TENSOR REMARK 3 T11: 0.1660 T22: 0.1849 REMARK 3 T33: 0.2217 T12: 0.0521 REMARK 3 T13: -0.0242 T23: -0.0177 REMARK 3 L TENSOR REMARK 3 L11: 0.5894 L22: 0.7755 REMARK 3 L33: 1.0991 L12: 0.2278 REMARK 3 L13: -0.0310 L23: -0.4443 REMARK 3 S TENSOR REMARK 3 S11: 0.0509 S12: -0.0133 S13: 0.0655 REMARK 3 S21: 0.0673 S22: -0.1335 S23: -0.0009 REMARK 3 S31: -0.0987 S32: -0.1072 S33: -0.0001 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 151 THROUGH 179 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.0780 44.3940 -5.4766 REMARK 3 T TENSOR REMARK 3 T11: 0.2378 T22: 0.2207 REMARK 3 T33: 0.2689 T12: 0.0526 REMARK 3 T13: -0.0594 T23: 0.0342 REMARK 3 L TENSOR REMARK 3 L11: 0.6011 L22: 0.6018 REMARK 3 L33: 1.0295 L12: -0.0321 REMARK 3 L13: -0.6196 L23: -0.4596 REMARK 3 S TENSOR REMARK 3 S11: -0.0501 S12: 0.1268 S13: 0.2250 REMARK 3 S21: -0.3205 S22: -0.1184 S23: 0.1265 REMARK 3 S31: -0.2504 S32: -0.1574 S33: -0.0066 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 73 THROUGH 102 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.7184 32.1261 30.0796 REMARK 3 T TENSOR REMARK 3 T11: 0.3212 T22: 0.3342 REMARK 3 T33: 0.2084 T12: -0.0614 REMARK 3 T13: -0.0028 T23: 0.0073 REMARK 3 L TENSOR REMARK 3 L11: 0.5138 L22: 0.1948 REMARK 3 L33: 0.5537 L12: -0.3269 REMARK 3 L13: 0.5821 L23: -0.3435 REMARK 3 S TENSOR REMARK 3 S11: -0.1007 S12: -0.2292 S13: -0.0243 REMARK 3 S21: 0.2267 S22: -0.0447 S23: 0.0934 REMARK 3 S31: 0.0280 S32: 0.0515 S33: -0.0096 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 103 THROUGH 109 ) REMARK 3 ORIGIN FOR THE GROUP (A): 28.7410 27.3527 12.3608 REMARK 3 T TENSOR REMARK 3 T11: 0.2422 T22: 0.2866 REMARK 3 T33: 0.2405 T12: -0.0014 REMARK 3 T13: -0.0339 T23: -0.0340 REMARK 3 L TENSOR REMARK 3 L11: 0.0469 L22: 0.1012 REMARK 3 L33: 0.2210 L12: 0.0648 REMARK 3 L13: -0.0383 L23: -0.1033 REMARK 3 S TENSOR REMARK 3 S11: 0.0399 S12: -0.1272 S13: 0.1153 REMARK 3 S21: -0.1876 S22: 0.0952 S23: -0.0444 REMARK 3 S31: 0.5839 S32: -0.3254 S33: 0.0027 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 110 THROUGH 119 ) REMARK 3 ORIGIN FOR THE GROUP (A): 35.8929 38.0517 17.2641 REMARK 3 T TENSOR REMARK 3 T11: 0.3061 T22: 0.3413 REMARK 3 T33: 0.2958 T12: -0.0622 REMARK 3 T13: -0.0636 T23: 0.0439 REMARK 3 L TENSOR REMARK 3 L11: 0.1262 L22: 0.0062 REMARK 3 L33: 0.0678 L12: -0.0255 REMARK 3 L13: -0.0949 L23: 0.0189 REMARK 3 S TENSOR REMARK 3 S11: -0.0887 S12: 0.0163 S13: 0.0725 REMARK 3 S21: 0.3389 S22: -0.0973 S23: -0.2028 REMARK 3 S31: -0.1460 S32: 0.5044 S33: 0.0004 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 120 THROUGH 136 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.7427 41.2803 13.3742 REMARK 3 T TENSOR REMARK 3 T11: 0.3024 T22: 0.2598 REMARK 3 T33: 0.2604 T12: 0.0184 REMARK 3 T13: -0.0052 T23: -0.0499 REMARK 3 L TENSOR REMARK 3 L11: 0.1728 L22: 0.4369 REMARK 3 L33: 0.3341 L12: 0.2783 REMARK 3 L13: -0.2422 L23: -0.3840 REMARK 3 S TENSOR REMARK 3 S11: -0.0179 S12: -0.0789 S13: 0.2581 REMARK 3 S21: 0.0213 S22: -0.1244 S23: 0.4669 REMARK 3 S31: -0.4219 S32: -0.1939 S33: -0.0003 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 137 THROUGH 159 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.0879 26.9288 8.0096 REMARK 3 T TENSOR REMARK 3 T11: 0.3052 T22: 0.2802 REMARK 3 T33: 0.3183 T12: -0.0926 REMARK 3 T13: -0.0338 T23: -0.0445 REMARK 3 L TENSOR REMARK 3 L11: 0.2006 L22: 0.2068 REMARK 3 L33: 0.2428 L12: 0.0988 REMARK 3 L13: 0.1080 L23: -0.1529 REMARK 3 S TENSOR REMARK 3 S11: 0.1563 S12: -0.0946 S13: -0.0008 REMARK 3 S21: -0.0365 S22: -0.0535 S23: 0.2456 REMARK 3 S31: 0.3931 S32: -0.1775 S33: -0.0038 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 160 THROUGH 178 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.8187 37.7721 24.8230 REMARK 3 T TENSOR REMARK 3 T11: 0.3614 T22: 0.3477 REMARK 3 T33: 0.2041 T12: -0.1337 REMARK 3 T13: -0.0121 T23: -0.0245 REMARK 3 L TENSOR REMARK 3 L11: 0.9001 L22: 1.8016 REMARK 3 L33: 0.1791 L12: -0.4623 REMARK 3 L13: 0.2454 L23: 0.2764 REMARK 3 S TENSOR REMARK 3 S11: -0.2830 S12: -0.2229 S13: 0.1285 REMARK 3 S21: 0.4993 S22: -0.0516 S23: 0.1062 REMARK 3 S31: -0.3361 S32: 0.0424 S33: -0.1911 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4YK2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-MAR-15. REMARK 100 THE DEPOSITION ID IS D_1000207585. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-FEB-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-G REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97857 REMARK 200 MONOCHROMATOR : DIAMOND (111) REMARK 200 OPTICS : BERYLLIUM LENSES REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21863 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.050 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 4.900 REMARK 200 R MERGE (I) : 0.06100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.3300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.05 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.10 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.3 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.54800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.180 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MR-ROSETTA REMARK 200 STARTING MODEL: PDB ENTRY 4YK1 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.37 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.53 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1:1 24.7 MG/ML PROTEIN AND MCSG1(C8) REMARK 280 (0.2 M AMMONIUM SULFATE, 0.1 M SODIUM CITRATE/HCL, PH 5.6, 25% REMARK 280 PEG4000), CRYOPROTECTANT: 20% ETHYLENE GLYCOL, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 38.34000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 31.15500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 38.34000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 31.15500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B 410 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 55 REMARK 465 ALA A 56 REMARK 465 HIS A 57 REMARK 465 HIS A 58 REMARK 465 HIS A 59 REMARK 465 HIS A 60 REMARK 465 HIS A 61 REMARK 465 HIS A 62 REMARK 465 MET A 63 REMARK 465 PHE A 64 REMARK 465 ILE A 65 REMARK 465 SER A 66 REMARK 465 PRO A 67 REMARK 465 GLN A 68 REMARK 465 LYS A 69 REMARK 465 ILE A 70 REMARK 465 VAL A 71 REMARK 465 PRO A 72 REMARK 465 ASN A 180 REMARK 465 ILE A 181 REMARK 465 ILE A 182 REMARK 465 LYS A 183 REMARK 465 ASN A 184 REMARK 465 HIS A 185 REMARK 465 ASN A 186 REMARK 465 ALA A 187 REMARK 465 GLU A 188 REMARK 465 GLN A 189 REMARK 465 LYS A 190 REMARK 465 ARG A 191 REMARK 465 LEU A 192 REMARK 465 ALA A 193 REMARK 465 GLN A 194 REMARK 465 SER A 195 REMARK 465 VAL A 196 REMARK 465 GLU A 197 REMARK 465 LEU A 198 REMARK 465 PRO A 199 REMARK 465 SER A 200 REMARK 465 ASP A 201 REMARK 465 MET B 55 REMARK 465 ALA B 56 REMARK 465 HIS B 57 REMARK 465 HIS B 58 REMARK 465 HIS B 59 REMARK 465 HIS B 60 REMARK 465 HIS B 61 REMARK 465 HIS B 62 REMARK 465 MET B 63 REMARK 465 PHE B 64 REMARK 465 ILE B 65 REMARK 465 SER B 66 REMARK 465 PRO B 67 REMARK 465 GLN B 68 REMARK 465 LYS B 69 REMARK 465 ILE B 70 REMARK 465 VAL B 71 REMARK 465 PRO B 72 REMARK 465 GLY B 179 REMARK 465 ASN B 180 REMARK 465 ILE B 181 REMARK 465 ILE B 182 REMARK 465 LYS B 183 REMARK 465 ASN B 184 REMARK 465 HIS B 185 REMARK 465 ASN B 186 REMARK 465 ALA B 187 REMARK 465 GLU B 188 REMARK 465 GLN B 189 REMARK 465 LYS B 190 REMARK 465 ARG B 191 REMARK 465 LEU B 192 REMARK 465 ALA B 193 REMARK 465 GLN B 194 REMARK 465 SER B 195 REMARK 465 VAL B 196 REMARK 465 GLU B 197 REMARK 465 LEU B 198 REMARK 465 PRO B 199 REMARK 465 SER B 200 REMARK 465 ASP B 201 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A 73 CG CD1 CD2 REMARK 470 PHE A 78 CG CD1 CD2 CE1 CE2 CZ REMARK 470 PHE A 146 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LEU B 73 CG CD1 CD2 REMARK 470 GLU B 77 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O PHE B 103 O HOH B 449 2.04 REMARK 500 O1 SO4 B 302 O HOH B 476 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 133 59.52 -143.82 REMARK 500 SER A 133 58.90 -143.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 303 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: SSGCID-BACLA.17330.I RELATED DB: TARGETTRACK REMARK 900 RELATED ID: 4YK1 RELATED DB: PDB REMARK 900 RELATED ID: 4YK3 RELATED DB: PDB DBREF 4YK2 A 64 201 UNP E6YIM5 E6YIM5_BARC7 64 201 DBREF 4YK2 B 64 201 UNP E6YIM5 E6YIM5_BARC7 64 201 SEQADV 4YK2 MET A 55 UNP E6YIM5 EXPRESSION TAG SEQADV 4YK2 ALA A 56 UNP E6YIM5 EXPRESSION TAG SEQADV 4YK2 HIS A 57 UNP E6YIM5 EXPRESSION TAG SEQADV 4YK2 HIS A 58 UNP E6YIM5 EXPRESSION TAG SEQADV 4YK2 HIS A 59 UNP E6YIM5 EXPRESSION TAG SEQADV 4YK2 HIS A 60 UNP E6YIM5 EXPRESSION TAG SEQADV 4YK2 HIS A 61 UNP E6YIM5 EXPRESSION TAG SEQADV 4YK2 HIS A 62 UNP E6YIM5 EXPRESSION TAG SEQADV 4YK2 MET A 63 UNP E6YIM5 EXPRESSION TAG SEQADV 4YK2 MET B 55 UNP E6YIM5 EXPRESSION TAG SEQADV 4YK2 ALA B 56 UNP E6YIM5 EXPRESSION TAG SEQADV 4YK2 HIS B 57 UNP E6YIM5 EXPRESSION TAG SEQADV 4YK2 HIS B 58 UNP E6YIM5 EXPRESSION TAG SEQADV 4YK2 HIS B 59 UNP E6YIM5 EXPRESSION TAG SEQADV 4YK2 HIS B 60 UNP E6YIM5 EXPRESSION TAG SEQADV 4YK2 HIS B 61 UNP E6YIM5 EXPRESSION TAG SEQADV 4YK2 HIS B 62 UNP E6YIM5 EXPRESSION TAG SEQADV 4YK2 MET B 63 UNP E6YIM5 EXPRESSION TAG SEQRES 1 A 147 MET ALA HIS HIS HIS HIS HIS HIS MET PHE ILE SER PRO SEQRES 2 A 147 GLN LYS ILE VAL PRO LEU SER TYR ASN GLU PHE ILE ARG SEQRES 3 A 147 LYS VAL VAL SER ASP HIS SER ILE GLN GLU GLN GLU LYS SEQRES 4 A 147 GLU ILE ARG ARG LEU SER GLN ILE VAL PHE GLY ASN GLN SEQRES 5 A 147 ASN GLN LEU ALA ASN GLN LEU SER GLN ILE HIS GLU ASN SEQRES 6 A 147 PRO SER PHE THR LYS ILE ILE SER ASN THR LEU THR ASN SEQRES 7 A 147 SER PRO GLU SER PHE ALA LYS LEU ALA GLY SER LYS THR SEQRES 8 A 147 PHE GLY ILE LYS ASN SER LYS ARG LYS GLN ALA GLU LYS SEQRES 9 A 147 ASN ILE SER LYS LEU VAL GLU ALA ILE HIS LYS TYR ALA SEQRES 10 A 147 ASP ALA VAL GLU ASN SER MET GLY ASN ILE ILE LYS ASN SEQRES 11 A 147 HIS ASN ALA GLU GLN LYS ARG LEU ALA GLN SER VAL GLU SEQRES 12 A 147 LEU PRO SER ASP SEQRES 1 B 147 MET ALA HIS HIS HIS HIS HIS HIS MET PHE ILE SER PRO SEQRES 2 B 147 GLN LYS ILE VAL PRO LEU SER TYR ASN GLU PHE ILE ARG SEQRES 3 B 147 LYS VAL VAL SER ASP HIS SER ILE GLN GLU GLN GLU LYS SEQRES 4 B 147 GLU ILE ARG ARG LEU SER GLN ILE VAL PHE GLY ASN GLN SEQRES 5 B 147 ASN GLN LEU ALA ASN GLN LEU SER GLN ILE HIS GLU ASN SEQRES 6 B 147 PRO SER PHE THR LYS ILE ILE SER ASN THR LEU THR ASN SEQRES 7 B 147 SER PRO GLU SER PHE ALA LYS LEU ALA GLY SER LYS THR SEQRES 8 B 147 PHE GLY ILE LYS ASN SER LYS ARG LYS GLN ALA GLU LYS SEQRES 9 B 147 ASN ILE SER LYS LEU VAL GLU ALA ILE HIS LYS TYR ALA SEQRES 10 B 147 ASP ALA VAL GLU ASN SER MET GLY ASN ILE ILE LYS ASN SEQRES 11 B 147 HIS ASN ALA GLU GLN LYS ARG LEU ALA GLN SER VAL GLU SEQRES 12 B 147 LEU PRO SER ASP HET SO4 A 301 5 HET SO4 A 302 5 HET SO4 A 303 5 HET SO4 A 304 5 HET SO4 A 305 5 HET SO4 B 301 5 HET SO4 B 302 5 HET EDO B 303 4 HETNAM SO4 SULFATE ION HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 3 SO4 7(O4 S 2-) FORMUL 10 EDO C2 H6 O2 FORMUL 11 HOH *171(H2 O) HELIX 1 AA1 SER A 74 GLY A 104 1 31 HELIX 2 AA2 LEU A 109 ASN A 119 1 11 HELIX 3 AA3 PHE A 122 SER A 133 1 12 HELIX 4 AA4 PRO A 134 PHE A 137 5 4 HELIX 5 AA5 ASN A 150 LYS A 158 1 9 HELIX 6 AA6 ASN A 159 MET A 178 1 20 HELIX 7 AA7 SER B 74 GLY B 104 1 31 HELIX 8 AA8 LEU B 109 ASN B 119 1 11 HELIX 9 AA9 PHE B 122 SER B 133 1 12 HELIX 10 AB1 PRO B 134 PHE B 137 5 4 HELIX 11 AB2 ASN B 150 ASN B 159 1 10 HELIX 12 AB3 ASN B 159 MET B 178 1 20 SHEET 1 AA1 2 LYS A 144 THR A 145 0 SHEET 2 AA1 2 ILE A 148 LYS A 149 -1 O ILE A 148 N THR A 145 SHEET 1 AA2 2 LYS B 144 THR B 145 0 SHEET 2 AA2 2 ILE B 148 LYS B 149 -1 O ILE B 148 N THR B 145 CISPEP 1 PHE B 103 GLY B 104 0 -22.29 SITE 1 AC1 5 GLY A 142 SER A 143 ASN A 150 LYS A 152 SITE 2 AC1 5 HOH A 459 SITE 1 AC2 3 ASN A 150 SER A 151 HOH A 457 SITE 1 AC3 4 ASN A 105 HOH A 401 ASN B 105 ASN B 107 SITE 1 AC4 3 SER A 121 PHE A 122 GLU B 135 SITE 1 AC5 2 ASN A 76 ARG A 80 SITE 1 AC6 5 GLY B 142 SER B 143 ASN B 150 LYS B 152 SITE 2 AC6 5 HOH B 471 SITE 1 AC7 4 GLU B 135 LYS B 139 ARG B 153 HOH B 476 SITE 1 AC8 2 ASN B 119 SER B 121 CRYST1 76.680 62.310 71.040 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013041 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016049 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014077 0.00000