HEADER HEME-BINDING PROTEIN 07-MAR-15 4YMP TITLE CRYSTAL STRUCTURE OF THE BACILLUS ANTHRACIS HAL NEAT DOMAIN IN COMPLEX TITLE 2 WITH HEME COMPND MOL_ID: 1; COMPND 2 MOLECULE: INTERNALIN; COMPND 3 CHAIN: A, C; COMPND 4 FRAGMENT: UNP RESIDUES 37-166; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS ANTHRACIS; SOURCE 3 ORGANISM_TAXID: 1392; SOURCE 4 GENE: HYU01_03010; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21-GOLD (DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS HEME BINDING PROTEIN, HEME-BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR R.TORRES,C.W.GOULDING REVDAT 2 28-FEB-24 4YMP 1 REMARK REVDAT 1 20-JUL-16 4YMP 0 JRNL AUTH R.TORRES,C.W.GOULDING JRNL TITL CRYSTAL STRUCTURE OF THE BACILLUS ANTHRACIS HAL NEAT DOMAIN JRNL TITL 2 IN COMPLEX WITH HEME JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 3.15 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.15 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.21 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 7087 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.281 REMARK 3 R VALUE (WORKING SET) : 0.276 REMARK 3 FREE R VALUE : 0.326 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 709 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.2105 - 5.3844 1.00 1391 154 0.2658 0.3259 REMARK 3 2 5.3844 - 4.2747 1.00 1270 143 0.2402 0.2823 REMARK 3 3 4.2747 - 3.7346 1.00 1253 139 0.2951 0.3455 REMARK 3 4 3.7346 - 3.3933 1.00 1238 136 0.3226 0.3793 REMARK 3 5 3.3933 - 3.1501 1.00 1226 137 0.3508 0.3619 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.520 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 33.790 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 111.5 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 1919 REMARK 3 ANGLE : 0.974 2600 REMARK 3 CHIRALITY : 0.031 272 REMARK 3 PLANARITY : 0.003 314 REMARK 3 DIHEDRAL : 15.963 703 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 10 THROUGH 35 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.6730 20.3768 64.9717 REMARK 3 T TENSOR REMARK 3 T11: 0.9476 T22: 0.7147 REMARK 3 T33: 0.8372 T12: 0.1106 REMARK 3 T13: 0.1938 T23: -0.0720 REMARK 3 L TENSOR REMARK 3 L11: 5.8302 L22: 9.3621 REMARK 3 L33: 5.6179 L12: -1.1880 REMARK 3 L13: 0.8865 L23: -3.0957 REMARK 3 S TENSOR REMARK 3 S11: -0.5091 S12: -0.2375 S13: -0.3596 REMARK 3 S21: -0.8020 S22: 0.1682 S23: -0.1914 REMARK 3 S31: 0.8697 S32: 0.0991 S33: 0.5920 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 36 THROUGH 73 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.9709 30.0020 72.4262 REMARK 3 T TENSOR REMARK 3 T11: 0.8539 T22: 0.4057 REMARK 3 T33: 0.9010 T12: 0.0424 REMARK 3 T13: -0.1519 T23: 0.0415 REMARK 3 L TENSOR REMARK 3 L11: 9.7717 L22: 5.5546 REMARK 3 L33: 8.1669 L12: -0.8052 REMARK 3 L13: -2.0443 L23: -0.1749 REMARK 3 S TENSOR REMARK 3 S11: -0.2635 S12: -0.1194 S13: -0.4532 REMARK 3 S21: -0.1731 S22: 0.0896 S23: -0.2135 REMARK 3 S31: -0.1511 S32: 0.3091 S33: 0.4069 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 74 THROUGH 111 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.0044 26.4725 73.5069 REMARK 3 T TENSOR REMARK 3 T11: 0.9433 T22: 0.5500 REMARK 3 T33: 0.9901 T12: 0.0711 REMARK 3 T13: -0.0504 T23: 0.1535 REMARK 3 L TENSOR REMARK 3 L11: 4.1989 L22: 7.1444 REMARK 3 L33: 7.5632 L12: 4.7650 REMARK 3 L13: -3.9925 L23: -1.6853 REMARK 3 S TENSOR REMARK 3 S11: 0.0619 S12: -0.8543 S13: 0.3170 REMARK 3 S21: 0.9108 S22: -0.1504 S23: 0.2180 REMARK 3 S31: 0.1919 S32: 0.5741 S33: 0.0338 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 112 THROUGH 128 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.8752 21.4104 67.8682 REMARK 3 T TENSOR REMARK 3 T11: 0.9324 T22: 0.4944 REMARK 3 T33: 0.9170 T12: 0.1240 REMARK 3 T13: -0.0062 T23: -0.0085 REMARK 3 L TENSOR REMARK 3 L11: 8.7090 L22: 5.4842 REMARK 3 L33: 4.2502 L12: 4.4784 REMARK 3 L13: -5.4049 L23: -4.6835 REMARK 3 S TENSOR REMARK 3 S11: -0.6580 S12: -0.4797 S13: -0.6106 REMARK 3 S21: -0.0067 S22: -0.2347 S23: -0.8462 REMARK 3 S31: 1.2985 S32: 0.6449 S33: 1.0013 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 12 THROUGH 51 ) REMARK 3 ORIGIN FOR THE GROUP (A): -21.4690 -5.5162 81.2121 REMARK 3 T TENSOR REMARK 3 T11: 1.6699 T22: 0.4633 REMARK 3 T33: 1.2300 T12: -0.0413 REMARK 3 T13: -0.0416 T23: 0.0724 REMARK 3 L TENSOR REMARK 3 L11: 2.9908 L22: 2.1030 REMARK 3 L33: 3.8629 L12: 0.4074 REMARK 3 L13: 0.2375 L23: -2.7778 REMARK 3 S TENSOR REMARK 3 S11: 0.2625 S12: -0.9169 S13: -0.7469 REMARK 3 S21: -0.4748 S22: -0.0710 S23: -0.5562 REMARK 3 S31: 0.6773 S32: 0.4865 S33: 0.2177 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 52 THROUGH 84 ) REMARK 3 ORIGIN FOR THE GROUP (A): -27.9107 -5.0479 68.7493 REMARK 3 T TENSOR REMARK 3 T11: 1.7518 T22: 0.7688 REMARK 3 T33: 0.9283 T12: -0.3287 REMARK 3 T13: 0.1447 T23: -0.0430 REMARK 3 L TENSOR REMARK 3 L11: 3.1825 L22: 8.2774 REMARK 3 L33: 5.8167 L12: 4.5633 REMARK 3 L13: 0.2989 L23: 2.0938 REMARK 3 S TENSOR REMARK 3 S11: -0.4544 S12: -0.1755 S13: -0.1236 REMARK 3 S21: -0.3331 S22: -0.7355 S23: 0.5861 REMARK 3 S31: 1.5914 S32: -1.2873 S33: -0.1205 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 85 THROUGH 128 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.9266 -5.6545 75.8136 REMARK 3 T TENSOR REMARK 3 T11: 1.8936 T22: 0.2023 REMARK 3 T33: 1.3919 T12: 0.2776 REMARK 3 T13: -0.2073 T23: -0.0462 REMARK 3 L TENSOR REMARK 3 L11: 2.0134 L22: 3.0204 REMARK 3 L33: 2.4910 L12: 0.9101 REMARK 3 L13: 0.6308 L23: -2.1977 REMARK 3 S TENSOR REMARK 3 S11: 0.5473 S12: 1.3012 S13: -1.2540 REMARK 3 S21: -0.9489 S22: -0.1158 S23: -0.4037 REMARK 3 S31: 2.1419 S32: 1.5857 S33: 0.4981 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN A REMARK 3 SELECTION : CHAIN C REMARK 3 ATOM PAIRS NUMBER : 916 REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4YMP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-MAR-15. REMARK 100 THE DEPOSITION ID IS D_1000207646. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-SEP-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL, SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 7129 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.150 REMARK 200 RESOLUTION RANGE LOW (A) : 89.140 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 12.80 REMARK 200 R MERGE (I) : 0.18400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.15 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.37 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 13.10 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.73 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.05 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M AMMONIUM SULFATE, 0.1 M BIS TRIS REMARK 280 PH 5.5, 21% PEG 3350, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 64 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+1/3 REMARK 290 6555 X-Y,X,Z+2/3 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+1/3 REMARK 290 11555 -X+Y,Y,-Z REMARK 290 12555 X,X-Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 59.42333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 118.84667 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 59.42333 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 118.84667 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 59.42333 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 118.84667 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 59.42333 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 118.84667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A -1 REMARK 465 ASN A 0 REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 VAL A 3 REMARK 465 GLN A 4 REMARK 465 SER A 5 REMARK 465 PRO A 6 REMARK 465 LYS A 7 REMARK 465 LYS A 8 REMARK 465 HIS A 9 REMARK 465 ASP A 63 REMARK 465 SER A 64 REMARK 465 LYS A 65 REMARK 465 GLU A 66 REMARK 465 PRO A 67 REMARK 465 GLY A 68 REMARK 465 VAL A 69 REMARK 465 GLU C -1 REMARK 465 ASN C 0 REMARK 465 MET C 1 REMARK 465 ALA C 2 REMARK 465 VAL C 3 REMARK 465 GLN C 4 REMARK 465 SER C 5 REMARK 465 PRO C 6 REMARK 465 LYS C 7 REMARK 465 LYS C 8 REMARK 465 HIS C 9 REMARK 465 VAL C 10 REMARK 465 PHE C 11 REMARK 465 GLU C 40 REMARK 465 ASN C 41 REMARK 465 GLY C 42 REMARK 465 LYS C 43 REMARK 465 GLU C 62 REMARK 465 ASP C 63 REMARK 465 SER C 64 REMARK 465 LYS C 65 REMARK 465 GLU C 66 REMARK 465 PRO C 67 REMARK 465 GLY C 68 REMARK 465 VAL C 69 REMARK 465 GLY C 93 REMARK 465 GLU C 94 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 19 76.43 -68.27 REMARK 500 ASP A 20 -127.55 50.15 REMARK 500 ASP A 34 59.75 39.85 REMARK 500 LYS C 19 77.28 -67.44 REMARK 500 ASP C 20 -127.26 51.66 REMARK 500 ASP C 34 63.26 39.88 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM A 201 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TYR A 112 OH REMARK 620 2 HEM A 201 NA 101.9 REMARK 620 3 HEM A 201 NB 103.6 88.5 REMARK 620 4 HEM A 201 NC 82.0 176.1 90.0 REMARK 620 5 HEM A 201 ND 82.8 89.6 173.6 91.5 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HEM A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HEM C 201 DBREF1 4YMP A -1 128 UNP A0A075KLA4_BACAN DBREF2 4YMP A A0A075KLA4 37 166 DBREF1 4YMP C -1 128 UNP A0A075KLA4_BACAN DBREF2 4YMP C A0A075KLA4 37 166 SEQRES 1 A 130 GLU ASN MET ALA VAL GLN SER PRO LYS LYS HIS VAL PHE SEQRES 2 A 130 ASP ALA VAL ILE LYS ALA TYR LYS ASP ASN SER ASP GLU SEQRES 3 A 130 GLU SER TYR ALA THR VAL TYR ILE LYS ASP PRO LYS LEU SEQRES 4 A 130 THR ILE GLU ASN GLY LYS ARG ILE ILE THR ALA THR LEU SEQRES 5 A 130 LYS ASP SER ASP PHE PHE ASP TYR LEU LYS VAL GLU ASP SEQRES 6 A 130 SER LYS GLU PRO GLY VAL PHE HIS ASP VAL LYS VAL LEU SEQRES 7 A 130 SER GLU ASP LYS ARG LYS HIS GLY THR LYS VAL ILE GLN SEQRES 8 A 130 PHE GLU VAL GLY GLU LEU GLY LYS ARG TYR ASN MET GLN SEQRES 9 A 130 MET HIS ILE LEU ILE PRO THR LEU GLY TYR ASP LYS GLU SEQRES 10 A 130 PHE LYS ILE GLN PHE GLU VAL ASN MET ARG THR PHE VAL SEQRES 1 C 130 GLU ASN MET ALA VAL GLN SER PRO LYS LYS HIS VAL PHE SEQRES 2 C 130 ASP ALA VAL ILE LYS ALA TYR LYS ASP ASN SER ASP GLU SEQRES 3 C 130 GLU SER TYR ALA THR VAL TYR ILE LYS ASP PRO LYS LEU SEQRES 4 C 130 THR ILE GLU ASN GLY LYS ARG ILE ILE THR ALA THR LEU SEQRES 5 C 130 LYS ASP SER ASP PHE PHE ASP TYR LEU LYS VAL GLU ASP SEQRES 6 C 130 SER LYS GLU PRO GLY VAL PHE HIS ASP VAL LYS VAL LEU SEQRES 7 C 130 SER GLU ASP LYS ARG LYS HIS GLY THR LYS VAL ILE GLN SEQRES 8 C 130 PHE GLU VAL GLY GLU LEU GLY LYS ARG TYR ASN MET GLN SEQRES 9 C 130 MET HIS ILE LEU ILE PRO THR LEU GLY TYR ASP LYS GLU SEQRES 10 C 130 PHE LYS ILE GLN PHE GLU VAL ASN MET ARG THR PHE VAL HET HEM A 201 43 HET HEM C 201 43 HETNAM HEM PROTOPORPHYRIN IX CONTAINING FE HETSYN HEM HEME FORMUL 3 HEM 2(C34 H32 FE N4 O4) HELIX 1 AA1 SER A 26 VAL A 30 5 5 HELIX 2 AA2 SER A 53 PHE A 56 5 4 HELIX 3 AA3 SER C 26 VAL C 30 5 5 HELIX 4 AA4 SER C 53 PHE C 56 5 4 SHEET 1 AA1 9 HIS A 71 ASP A 72 0 SHEET 2 AA1 9 LYS A 60 VAL A 61 -1 N VAL A 61 O HIS A 71 SHEET 3 AA1 9 TYR A 99 ILE A 107 -1 O GLN A 102 N LYS A 60 SHEET 4 AA1 9 TYR A 112 MET A 124 -1 O LYS A 114 N ILE A 105 SHEET 5 AA1 9 PHE A 11 TYR A 18 -1 N LYS A 16 O GLU A 121 SHEET 6 AA1 9 ILE A 32 GLU A 40 -1 O LEU A 37 N PHE A 11 SHEET 7 AA1 9 LYS A 43 LYS A 51 -1 O THR A 47 N LYS A 36 SHEET 8 AA1 9 THR A 85 VAL A 92 -1 O VAL A 92 N ARG A 44 SHEET 9 AA1 9 LYS A 74 ASP A 79 -1 N LEU A 76 O VAL A 87 SHEET 1 AA2 3 ALA C 13 TYR C 18 0 SHEET 2 AA2 3 TYR C 112 MET C 124 -1 O GLU C 121 N LYS C 16 SHEET 3 AA2 3 ARG C 98 ILE C 107 -1 N MET C 101 O ILE C 118 SHEET 1 AA3 4 ILE C 32 THR C 38 0 SHEET 2 AA3 4 ILE C 45 LYS C 51 -1 O ILE C 45 N THR C 38 SHEET 3 AA3 4 THR C 85 GLU C 91 -1 O PHE C 90 N ILE C 46 SHEET 4 AA3 4 LYS C 74 ASP C 79 -1 N ASP C 79 O THR C 85 LINK OH TYR A 112 FE HEM A 201 1555 1555 2.64 CISPEP 1 LEU A 110 GLY A 111 0 -14.12 CISPEP 2 LEU C 110 GLY C 111 0 -14.00 SITE 1 AC1 14 LYS A 19 SER A 26 TYR A 27 TYR A 31 SITE 2 AC1 14 PHE A 56 ILE A 105 TYR A 112 LYS A 114 SITE 3 AC1 14 PHE A 116 ILE A 118 PHE A 127 LYS C 19 SITE 4 AC1 14 TYR C 27 HEM C 201 SITE 1 AC2 12 LYS A 19 TYR A 27 HEM A 201 LYS C 19 SITE 2 AC2 12 SER C 26 TYR C 27 TYR C 31 ILE C 105 SITE 3 AC2 12 TYR C 112 LYS C 114 PHE C 116 ILE C 118 CRYST1 84.850 84.850 178.270 90.00 90.00 120.00 P 64 2 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011786 0.006804 0.000000 0.00000 SCALE2 0.000000 0.013609 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005609 0.00000