HEADER TRANSCRIPTION 09-MAR-15 4YNA TITLE OXIDIZED YFIR COMPND MOL_ID: 1; COMPND 2 MOLECULE: YFIR; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: UNP RESIDUES 35-190; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA PAO1; SOURCE 3 ORGANISM_TAXID: 208964; SOURCE 4 STRAIN: PAO1; SOURCE 5 GENE: YFIR, PA1121; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21-CODONPLUS(DE3)-RIPL; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PETDUET-1 KEYWDS PERIPLASMIC REPRESSOR PROTEIN, OXIDIZED FORM, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR M.XU,T.JIANG REVDAT 4 23-OCT-24 4YNA 1 REMARK REVDAT 3 08-NOV-23 4YNA 1 SOURCE KEYWDS JRNL REMARK REVDAT 2 20-MAY-15 4YNA 1 JRNL REVDAT 1 22-APR-15 4YNA 0 JRNL AUTH X.YANG,X.-A.YANG,M.XU,L.ZHOU,Z.FAN,T.JIANG JRNL TITL CRYSTAL STRUCTURES OF YFIR FROM PSEUDOMONAS AERUGINOSA IN JRNL TITL 2 TWO REDOX STATES JRNL REF BIOCHEM.BIOPHYS.RES.COMMUN. V. 461 14 2015 JRNL REFN ESSN 1090-2104 JRNL PMID 25849887 JRNL DOI 10.1016/J.BBRC.2015.03.160 REMARK 2 REMARK 2 RESOLUTION. 3.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0029 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.88 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 86.7 REMARK 3 NUMBER OF REFLECTIONS : 8904 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.248 REMARK 3 R VALUE (WORKING SET) : 0.246 REMARK 3 FREE R VALUE : 0.281 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 450 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.28 REMARK 3 REFLECTION IN BIN (WORKING SET) : 433 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 60.03 REMARK 3 BIN R VALUE (WORKING SET) : 0.2380 REMARK 3 BIN FREE R VALUE SET COUNT : 28 REMARK 3 BIN FREE R VALUE : 0.2260 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4584 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 10 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 94.62 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.18000 REMARK 3 B22 (A**2) : -2.18000 REMARK 3 B33 (A**2) : 4.36000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.687 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.373 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 20.337 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.888 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.836 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4673 ; 0.010 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 4594 ; 0.007 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6335 ; 1.443 ; 1.966 REMARK 3 BOND ANGLES OTHERS (DEGREES): 10455 ; 0.849 ; 3.003 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 591 ; 5.802 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 214 ;35.210 ;21.963 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 787 ;16.761 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 64 ;13.956 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 725 ; 0.064 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5330 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1118 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 4YNA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 31-MAR-15. REMARK 100 THE DEPOSITION ID IS D_1000207716. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-FEB-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU FR-E DW REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54187 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 10704 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.200 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 200 DATA REDUNDANCY : 6.900 REMARK 200 R MERGE (I) : 0.16400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.26 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.00 REMARK 200 R MERGE FOR SHELL (I) : 0.48600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 4YN7 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.06 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.28 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES PH 7.5, 1.8 M AMMONIUM REMARK 280 SULFATE, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 297K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 42.88800 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 59.83400 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 59.83400 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 64.33200 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 59.83400 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 59.83400 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 21.44400 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 59.83400 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 59.83400 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 64.33200 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 59.83400 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 59.83400 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 21.44400 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 42.88800 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2000 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14610 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -45.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1330 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14450 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -5.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 32 REMARK 465 ASN A 33 REMARK 465 SER A 34 REMARK 465 ASP A 35 REMARK 465 ASP A 36 REMARK 465 ALA A 37 REMARK 465 GLY B 32 REMARK 465 ASN B 33 REMARK 465 SER B 34 REMARK 465 ASP B 35 REMARK 465 ASP B 36 REMARK 465 ALA B 37 REMARK 465 ARG B 186 REMARK 465 GLN B 187 REMARK 465 ALA B 188 REMARK 465 THR B 189 REMARK 465 PRO B 190 REMARK 465 GLY C 32 REMARK 465 ASN C 33 REMARK 465 SER C 34 REMARK 465 ASP C 35 REMARK 465 ASP C 36 REMARK 465 ALA C 37 REMARK 465 ARG C 38 REMARK 465 ALA C 188 REMARK 465 THR C 189 REMARK 465 PRO C 190 REMARK 465 GLY D 32 REMARK 465 ASN D 33 REMARK 465 SER D 34 REMARK 465 ASP D 35 REMARK 465 ASP D 36 REMARK 465 ALA D 37 REMARK 465 LEU D 183 REMARK 465 ALA D 184 REMARK 465 ARG D 185 REMARK 465 ARG D 186 REMARK 465 GLN D 187 REMARK 465 ALA D 188 REMARK 465 THR D 189 REMARK 465 PRO D 190 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 CYS C 71 CB CYS C 71 SG 0.241 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 146 0.82 -69.69 REMARK 500 ASP A 167 -72.71 -56.41 REMARK 500 ASN B 90 2.87 -66.17 REMARK 500 PRO B 134 84.68 -65.41 REMARK 500 THR B 143 -64.66 -142.65 REMARK 500 GLU B 144 26.85 -78.48 REMARK 500 SER B 146 -54.12 -171.83 REMARK 500 SER B 149 84.28 50.97 REMARK 500 ARG C 84 21.85 -72.28 REMARK 500 PRO D 134 78.74 -64.47 REMARK 500 CYS D 145 29.86 44.20 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 202 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4YN7 RELATED DB: PDB REMARK 900 RELATED ID: 4YN9 RELATED DB: PDB DBREF 4YNA A 35 190 UNP Q9I4L4 Q9I4L4_PSEAE 35 190 DBREF 4YNA B 35 190 UNP Q9I4L4 Q9I4L4_PSEAE 35 190 DBREF 4YNA C 35 190 UNP Q9I4L4 Q9I4L4_PSEAE 35 190 DBREF 4YNA D 35 190 UNP Q9I4L4 Q9I4L4_PSEAE 35 190 SEQADV 4YNA GLY A 32 UNP Q9I4L4 EXPRESSION TAG SEQADV 4YNA ASN A 33 UNP Q9I4L4 EXPRESSION TAG SEQADV 4YNA SER A 34 UNP Q9I4L4 EXPRESSION TAG SEQADV 4YNA GLY B 32 UNP Q9I4L4 EXPRESSION TAG SEQADV 4YNA ASN B 33 UNP Q9I4L4 EXPRESSION TAG SEQADV 4YNA SER B 34 UNP Q9I4L4 EXPRESSION TAG SEQADV 4YNA GLY C 32 UNP Q9I4L4 EXPRESSION TAG SEQADV 4YNA ASN C 33 UNP Q9I4L4 EXPRESSION TAG SEQADV 4YNA SER C 34 UNP Q9I4L4 EXPRESSION TAG SEQADV 4YNA GLY D 32 UNP Q9I4L4 EXPRESSION TAG SEQADV 4YNA ASN D 33 UNP Q9I4L4 EXPRESSION TAG SEQADV 4YNA SER D 34 UNP Q9I4L4 EXPRESSION TAG SEQRES 1 A 159 GLY ASN SER ASP ASP ALA ARG THR SER ILE GLU GLN ARG SEQRES 2 A 159 SER ASN ALA VAL SER GLN VAL LEU LEU GLY ILE PHE SER SEQRES 3 A 159 TYR VAL ARG TRP PRO LYS GLU PRO ALA VAL LEU GLN LEU SEQRES 4 A 159 CYS VAL VAL GLY PRO THR GLU TYR ALA ASP GLY LEU LEU SEQRES 5 A 159 ARG GLY MET VAL GLN ALA ASN GLY ARG ARG VAL HIS ALA SEQRES 6 A 159 GLU ARG ARG ALA VAL ASP ASN PRO ASP LEU GLY THR LEU SEQRES 7 A 159 CYS ASN VAL ILE TYR LEU GLY VAL VAL ASP GLU ARG GLU SEQRES 8 A 159 ARG GLN GLN VAL PHE ARG SER LEU ALA GLY HIS PRO VAL SEQRES 9 A 159 LEU SER ILE SER GLU ARG GLY THR GLU CYS SER VAL GLY SEQRES 10 A 159 SER MET PHE CYS LEU ASN VAL GLY GLY PRO ARG ILE THR SEQRES 11 A 159 PHE GLU ALA ASN LEU ASP SER ILE ALA ARG SER GLY VAL SEQRES 12 A 159 ARG VAL HIS PRO SER VAL LEU LYS LEU ALA ARG ARG GLN SEQRES 13 A 159 ALA THR PRO SEQRES 1 B 159 GLY ASN SER ASP ASP ALA ARG THR SER ILE GLU GLN ARG SEQRES 2 B 159 SER ASN ALA VAL SER GLN VAL LEU LEU GLY ILE PHE SER SEQRES 3 B 159 TYR VAL ARG TRP PRO LYS GLU PRO ALA VAL LEU GLN LEU SEQRES 4 B 159 CYS VAL VAL GLY PRO THR GLU TYR ALA ASP GLY LEU LEU SEQRES 5 B 159 ARG GLY MET VAL GLN ALA ASN GLY ARG ARG VAL HIS ALA SEQRES 6 B 159 GLU ARG ARG ALA VAL ASP ASN PRO ASP LEU GLY THR LEU SEQRES 7 B 159 CYS ASN VAL ILE TYR LEU GLY VAL VAL ASP GLU ARG GLU SEQRES 8 B 159 ARG GLN GLN VAL PHE ARG SER LEU ALA GLY HIS PRO VAL SEQRES 9 B 159 LEU SER ILE SER GLU ARG GLY THR GLU CYS SER VAL GLY SEQRES 10 B 159 SER MET PHE CYS LEU ASN VAL GLY GLY PRO ARG ILE THR SEQRES 11 B 159 PHE GLU ALA ASN LEU ASP SER ILE ALA ARG SER GLY VAL SEQRES 12 B 159 ARG VAL HIS PRO SER VAL LEU LYS LEU ALA ARG ARG GLN SEQRES 13 B 159 ALA THR PRO SEQRES 1 C 159 GLY ASN SER ASP ASP ALA ARG THR SER ILE GLU GLN ARG SEQRES 2 C 159 SER ASN ALA VAL SER GLN VAL LEU LEU GLY ILE PHE SER SEQRES 3 C 159 TYR VAL ARG TRP PRO LYS GLU PRO ALA VAL LEU GLN LEU SEQRES 4 C 159 CYS VAL VAL GLY PRO THR GLU TYR ALA ASP GLY LEU LEU SEQRES 5 C 159 ARG GLY MET VAL GLN ALA ASN GLY ARG ARG VAL HIS ALA SEQRES 6 C 159 GLU ARG ARG ALA VAL ASP ASN PRO ASP LEU GLY THR LEU SEQRES 7 C 159 CYS ASN VAL ILE TYR LEU GLY VAL VAL ASP GLU ARG GLU SEQRES 8 C 159 ARG GLN GLN VAL PHE ARG SER LEU ALA GLY HIS PRO VAL SEQRES 9 C 159 LEU SER ILE SER GLU ARG GLY THR GLU CYS SER VAL GLY SEQRES 10 C 159 SER MET PHE CYS LEU ASN VAL GLY GLY PRO ARG ILE THR SEQRES 11 C 159 PHE GLU ALA ASN LEU ASP SER ILE ALA ARG SER GLY VAL SEQRES 12 C 159 ARG VAL HIS PRO SER VAL LEU LYS LEU ALA ARG ARG GLN SEQRES 13 C 159 ALA THR PRO SEQRES 1 D 159 GLY ASN SER ASP ASP ALA ARG THR SER ILE GLU GLN ARG SEQRES 2 D 159 SER ASN ALA VAL SER GLN VAL LEU LEU GLY ILE PHE SER SEQRES 3 D 159 TYR VAL ARG TRP PRO LYS GLU PRO ALA VAL LEU GLN LEU SEQRES 4 D 159 CYS VAL VAL GLY PRO THR GLU TYR ALA ASP GLY LEU LEU SEQRES 5 D 159 ARG GLY MET VAL GLN ALA ASN GLY ARG ARG VAL HIS ALA SEQRES 6 D 159 GLU ARG ARG ALA VAL ASP ASN PRO ASP LEU GLY THR LEU SEQRES 7 D 159 CYS ASN VAL ILE TYR LEU GLY VAL VAL ASP GLU ARG GLU SEQRES 8 D 159 ARG GLN GLN VAL PHE ARG SER LEU ALA GLY HIS PRO VAL SEQRES 9 D 159 LEU SER ILE SER GLU ARG GLY THR GLU CYS SER VAL GLY SEQRES 10 D 159 SER MET PHE CYS LEU ASN VAL GLY GLY PRO ARG ILE THR SEQRES 11 D 159 PHE GLU ALA ASN LEU ASP SER ILE ALA ARG SER GLY VAL SEQRES 12 D 159 ARG VAL HIS PRO SER VAL LEU LYS LEU ALA ARG ARG GLN SEQRES 13 D 159 ALA THR PRO HET SO4 B 201 5 HET SO4 B 202 5 HETNAM SO4 SULFATE ION FORMUL 5 SO4 2(O4 S 2-) HELIX 1 AA1 SER A 40 SER A 57 1 18 HELIX 2 AA2 ALA A 79 ARG A 84 1 6 HELIX 3 AA3 ASP A 105 CYS A 110 1 6 HELIX 4 AA4 ASP A 119 LEU A 130 1 12 HELIX 5 AA5 THR A 143 GLY A 148 5 6 HELIX 6 AA6 ASN A 165 GLY A 173 1 9 HELIX 7 AA7 SER A 179 ALA A 188 1 10 HELIX 8 AA8 THR B 39 SER B 57 1 19 HELIX 9 AA9 ALA B 79 ARG B 84 1 6 HELIX 10 AB1 ASP B 105 CYS B 110 1 6 HELIX 11 AB2 ASP B 119 ALA B 131 1 13 HELIX 12 AB3 ASN B 165 SER B 172 1 8 HELIX 13 AB4 PRO B 178 ALA B 184 5 7 HELIX 14 AB5 SER C 40 TYR C 58 1 19 HELIX 15 AB6 ALA C 79 ARG C 84 1 6 HELIX 16 AB7 ASP C 105 CYS C 110 1 6 HELIX 17 AB8 ASP C 119 LEU C 130 1 12 HELIX 18 AB9 THR C 143 VAL C 147 5 5 HELIX 19 AC1 ASN C 165 GLY C 173 1 9 HELIX 20 AC2 VAL C 180 GLN C 187 1 8 HELIX 21 AC3 THR D 39 TYR D 58 1 20 HELIX 22 AC4 ALA D 79 ARG D 84 1 6 HELIX 23 AC5 ASP D 105 CYS D 110 1 6 HELIX 24 AC6 ASP D 119 ALA D 131 1 13 HELIX 25 AC7 ASP D 167 SER D 172 1 6 SHEET 1 AA1 2 VAL A 59 ARG A 60 0 SHEET 2 AA1 2 ARG A 175 VAL A 176 -1 O ARG A 175 N ARG A 60 SHEET 1 AA2 7 MET A 86 VAL A 87 0 SHEET 2 AA2 7 ARG A 93 ARG A 99 -1 O VAL A 94 N MET A 86 SHEET 3 AA2 7 LEU A 68 VAL A 73 1 N VAL A 72 O ARG A 99 SHEET 4 AA2 7 VAL A 112 LEU A 115 1 O TYR A 114 N VAL A 73 SHEET 5 AA2 7 LEU A 136 SER A 139 1 O ILE A 138 N LEU A 115 SHEET 6 AA2 7 PHE A 151 ASN A 154 1 O PHE A 151 N SER A 139 SHEET 7 AA2 7 THR A 161 ALA A 164 -1 O THR A 161 N ASN A 154 SHEET 1 AA3 2 VAL B 59 ARG B 60 0 SHEET 2 AA3 2 ARG B 175 VAL B 176 -1 O ARG B 175 N ARG B 60 SHEET 1 AA4 7 MET B 86 VAL B 87 0 SHEET 2 AA4 7 ARG B 93 ARG B 98 -1 O VAL B 94 N MET B 86 SHEET 3 AA4 7 VAL B 67 VAL B 73 1 N LEU B 70 O HIS B 95 SHEET 4 AA4 7 VAL B 112 LEU B 115 1 O VAL B 112 N GLN B 69 SHEET 5 AA4 7 LEU B 136 SER B 139 1 O ILE B 138 N LEU B 115 SHEET 6 AA4 7 PHE B 151 ASN B 154 1 O LEU B 153 N SER B 139 SHEET 7 AA4 7 THR B 161 ALA B 164 -1 O THR B 161 N ASN B 154 SHEET 1 AA5 2 VAL C 59 ARG C 60 0 SHEET 2 AA5 2 ARG C 175 VAL C 176 -1 O ARG C 175 N ARG C 60 SHEET 1 AA6 7 MET C 86 VAL C 87 0 SHEET 2 AA6 7 ARG C 93 ARG C 99 -1 O VAL C 94 N MET C 86 SHEET 3 AA6 7 LEU C 68 VAL C 73 1 N LEU C 70 O HIS C 95 SHEET 4 AA6 7 VAL C 112 LEU C 115 1 O TYR C 114 N CYS C 71 SHEET 5 AA6 7 LEU C 136 SER C 139 1 O LEU C 136 N ILE C 113 SHEET 6 AA6 7 PHE C 151 ASN C 154 1 O LEU C 153 N SER C 139 SHEET 7 AA6 7 THR C 161 ALA C 164 -1 O THR C 161 N ASN C 154 SHEET 1 AA7 2 VAL D 59 ARG D 60 0 SHEET 2 AA7 2 ARG D 175 VAL D 176 -1 O ARG D 175 N ARG D 60 SHEET 1 AA8 7 MET D 86 VAL D 87 0 SHEET 2 AA8 7 ARG D 93 ARG D 98 -1 O VAL D 94 N MET D 86 SHEET 3 AA8 7 VAL D 67 VAL D 73 1 N VAL D 72 O GLU D 97 SHEET 4 AA8 7 VAL D 112 LEU D 115 1 O TYR D 114 N CYS D 71 SHEET 5 AA8 7 LEU D 136 SER D 139 1 O ILE D 138 N ILE D 113 SHEET 6 AA8 7 PHE D 151 ASN D 154 1 O PHE D 151 N SER D 139 SHEET 7 AA8 7 THR D 161 ALA D 164 -1 O THR D 161 N ASN D 154 SSBOND 1 CYS A 71 CYS A 110 1555 1555 2.04 SSBOND 2 CYS A 145 CYS A 152 1555 1555 2.04 SSBOND 3 CYS B 71 CYS B 110 1555 1555 2.03 SSBOND 4 CYS B 145 CYS B 152 1555 1555 2.02 SSBOND 5 CYS C 71 CYS C 110 1555 1555 2.02 SSBOND 6 CYS C 145 CYS C 152 1555 1555 2.02 SSBOND 7 CYS D 71 CYS D 110 1555 1555 2.02 SSBOND 8 CYS D 145 CYS D 152 1555 1555 2.04 SITE 1 AC1 4 ILE A 41 ARG B 99 ALA B 100 ASN B 103 SITE 1 AC2 6 ARG A 99 ALA A 100 ASN A 103 THR B 39 SITE 2 AC2 6 SER B 40 ILE B 41 CRYST1 119.668 119.668 85.776 90.00 90.00 90.00 P 43 21 2 32 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008356 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008356 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011658 0.00000