data_4YP2 # _entry.id 4YP2 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.398 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4YP2 pdb_00004yp2 10.2210/pdb4yp2/pdb WWPDB D_1000207767 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-05-20 2 'Structure model' 1 1 2015-09-09 3 'Structure model' 1 2 2020-07-29 4 'Structure model' 1 3 2024-01-10 5 'Structure model' 1 4 2024-11-13 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 3 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Derived calculations' 4 3 'Structure model' 'Structure summary' 5 4 'Structure model' 'Data collection' 6 4 'Structure model' 'Database references' 7 4 'Structure model' 'Refinement description' 8 4 'Structure model' 'Structure summary' 9 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp 2 3 'Structure model' entity 3 3 'Structure model' pdbx_chem_comp_identifier 4 3 'Structure model' pdbx_entity_nonpoly 5 3 'Structure model' struct_conn 6 3 'Structure model' struct_site 7 3 'Structure model' struct_site_gen 8 4 'Structure model' chem_comp 9 4 'Structure model' chem_comp_atom 10 4 'Structure model' chem_comp_bond 11 4 'Structure model' database_2 12 4 'Structure model' pdbx_initial_refinement_model 13 5 'Structure model' pdbx_entry_details 14 5 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_chem_comp.name' 2 3 'Structure model' '_chem_comp.type' 3 3 'Structure model' '_entity.pdbx_description' 4 3 'Structure model' '_pdbx_entity_nonpoly.name' 5 3 'Structure model' '_struct_conn.pdbx_role' 6 4 'Structure model' '_chem_comp.pdbx_synonyms' 7 4 'Structure model' '_database_2.pdbx_DOI' 8 4 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 4YP2 _pdbx_database_status.recvd_initial_deposition_date 2015-03-12 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # _pdbx_database_related.db_name PDB _pdbx_database_related.details 'native protein' _pdbx_database_related.db_id 1MOM _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Vinkovic, M.' 1 'Hussain, J.' 2 'Wood, G.E.' 3 'Gill, R.' 4 'Wood, S.P.' 5 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Acta Crystallogr.,Sect.F' _citation.journal_id_ASTM ACSFEN _citation.journal_id_CSD ? _citation.journal_id_ISSN 2053-230X _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 71 _citation.language ? _citation.page_first 1152 _citation.page_last 1155 _citation.title 'Cleavage of nicotinamide adenine dinucleotide by the ribosome-inactivating protein from Momordica charantia.' _citation.year 2015 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1107/S2053230X15013540 _citation.pdbx_database_id_PubMed 26323301 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Vinkovic, M.' 1 ? primary 'Dunn, G.' 2 ? primary 'Wood, G.E.' 3 ? primary 'Husain, J.' 4 ? primary 'Wood, S.P.' 5 ? primary 'Gill, R.' 6 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'Ribosome-inactivating protein momordin I' 27396.285 1 3.2.2.22 ? 'UNP residues 24-269' ? 2 non-polymer man 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 1 ? ? ? ? 3 non-polymer syn NICOTINAMIDE 122.125 1 ? ? ? ? 4 water nat water 18.015 271 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Alpha-momorcharin,Alpha-MMC,rRNA N-glycosidase' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;DVSFRLSGADPRSYGMFIKDLRNALPFREKVYNIPLLLPSVSGAGRYLLMHLFNYDGKTITVAVDVTNVYIMGYLADTTS YFFNEPAAELASQYVFRDARRKITLPYSGNYERLQIAAGKPREKIPIGLPALDSAISTLLHYDSTAAAGALLVLIQTTAE AARFKYIEQQIQERAYRDEVPSLATISLENSWSGLSKQIQLAQGNNGIFRTPIVLVDNKGNRVQITNVTSKVVTSNIQLL LNTRNI ; _entity_poly.pdbx_seq_one_letter_code_can ;DVSFRLSGADPRSYGMFIKDLRNALPFREKVYNIPLLLPSVSGAGRYLLMHLFNYDGKTITVAVDVTNVYIMGYLADTTS YFFNEPAAELASQYVFRDARRKITLPYSGNYERLQIAAGKPREKIPIGLPALDSAISTLLHYDSTAAAGALLVLIQTTAE AARFKYIEQQIQERAYRDEVPSLATISLENSWSGLSKQIQLAQGNNGIFRTPIVLVDNKGNRVQITNVTSKVVTSNIQLL LNTRNI ; _entity_poly.pdbx_strand_id B _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 2-acetamido-2-deoxy-beta-D-glucopyranose NAG 3 NICOTINAMIDE NCA 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASP n 1 2 VAL n 1 3 SER n 1 4 PHE n 1 5 ARG n 1 6 LEU n 1 7 SER n 1 8 GLY n 1 9 ALA n 1 10 ASP n 1 11 PRO n 1 12 ARG n 1 13 SER n 1 14 TYR n 1 15 GLY n 1 16 MET n 1 17 PHE n 1 18 ILE n 1 19 LYS n 1 20 ASP n 1 21 LEU n 1 22 ARG n 1 23 ASN n 1 24 ALA n 1 25 LEU n 1 26 PRO n 1 27 PHE n 1 28 ARG n 1 29 GLU n 1 30 LYS n 1 31 VAL n 1 32 TYR n 1 33 ASN n 1 34 ILE n 1 35 PRO n 1 36 LEU n 1 37 LEU n 1 38 LEU n 1 39 PRO n 1 40 SER n 1 41 VAL n 1 42 SER n 1 43 GLY n 1 44 ALA n 1 45 GLY n 1 46 ARG n 1 47 TYR n 1 48 LEU n 1 49 LEU n 1 50 MET n 1 51 HIS n 1 52 LEU n 1 53 PHE n 1 54 ASN n 1 55 TYR n 1 56 ASP n 1 57 GLY n 1 58 LYS n 1 59 THR n 1 60 ILE n 1 61 THR n 1 62 VAL n 1 63 ALA n 1 64 VAL n 1 65 ASP n 1 66 VAL n 1 67 THR n 1 68 ASN n 1 69 VAL n 1 70 TYR n 1 71 ILE n 1 72 MET n 1 73 GLY n 1 74 TYR n 1 75 LEU n 1 76 ALA n 1 77 ASP n 1 78 THR n 1 79 THR n 1 80 SER n 1 81 TYR n 1 82 PHE n 1 83 PHE n 1 84 ASN n 1 85 GLU n 1 86 PRO n 1 87 ALA n 1 88 ALA n 1 89 GLU n 1 90 LEU n 1 91 ALA n 1 92 SER n 1 93 GLN n 1 94 TYR n 1 95 VAL n 1 96 PHE n 1 97 ARG n 1 98 ASP n 1 99 ALA n 1 100 ARG n 1 101 ARG n 1 102 LYS n 1 103 ILE n 1 104 THR n 1 105 LEU n 1 106 PRO n 1 107 TYR n 1 108 SER n 1 109 GLY n 1 110 ASN n 1 111 TYR n 1 112 GLU n 1 113 ARG n 1 114 LEU n 1 115 GLN n 1 116 ILE n 1 117 ALA n 1 118 ALA n 1 119 GLY n 1 120 LYS n 1 121 PRO n 1 122 ARG n 1 123 GLU n 1 124 LYS n 1 125 ILE n 1 126 PRO n 1 127 ILE n 1 128 GLY n 1 129 LEU n 1 130 PRO n 1 131 ALA n 1 132 LEU n 1 133 ASP n 1 134 SER n 1 135 ALA n 1 136 ILE n 1 137 SER n 1 138 THR n 1 139 LEU n 1 140 LEU n 1 141 HIS n 1 142 TYR n 1 143 ASP n 1 144 SER n 1 145 THR n 1 146 ALA n 1 147 ALA n 1 148 ALA n 1 149 GLY n 1 150 ALA n 1 151 LEU n 1 152 LEU n 1 153 VAL n 1 154 LEU n 1 155 ILE n 1 156 GLN n 1 157 THR n 1 158 THR n 1 159 ALA n 1 160 GLU n 1 161 ALA n 1 162 ALA n 1 163 ARG n 1 164 PHE n 1 165 LYS n 1 166 TYR n 1 167 ILE n 1 168 GLU n 1 169 GLN n 1 170 GLN n 1 171 ILE n 1 172 GLN n 1 173 GLU n 1 174 ARG n 1 175 ALA n 1 176 TYR n 1 177 ARG n 1 178 ASP n 1 179 GLU n 1 180 VAL n 1 181 PRO n 1 182 SER n 1 183 LEU n 1 184 ALA n 1 185 THR n 1 186 ILE n 1 187 SER n 1 188 LEU n 1 189 GLU n 1 190 ASN n 1 191 SER n 1 192 TRP n 1 193 SER n 1 194 GLY n 1 195 LEU n 1 196 SER n 1 197 LYS n 1 198 GLN n 1 199 ILE n 1 200 GLN n 1 201 LEU n 1 202 ALA n 1 203 GLN n 1 204 GLY n 1 205 ASN n 1 206 ASN n 1 207 GLY n 1 208 ILE n 1 209 PHE n 1 210 ARG n 1 211 THR n 1 212 PRO n 1 213 ILE n 1 214 VAL n 1 215 LEU n 1 216 VAL n 1 217 ASP n 1 218 ASN n 1 219 LYS n 1 220 GLY n 1 221 ASN n 1 222 ARG n 1 223 VAL n 1 224 GLN n 1 225 ILE n 1 226 THR n 1 227 ASN n 1 228 VAL n 1 229 THR n 1 230 SER n 1 231 LYS n 1 232 VAL n 1 233 VAL n 1 234 THR n 1 235 SER n 1 236 ASN n 1 237 ILE n 1 238 GLN n 1 239 LEU n 1 240 LEU n 1 241 LEU n 1 242 ASN n 1 243 THR n 1 244 ARG n 1 245 ASN n 1 246 ILE n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num 1 _entity_src_nat.pdbx_end_seq_num 246 _entity_src_nat.common_name 'Bitter gourd' _entity_src_nat.pdbx_organism_scientific 'Momordica charantia' _entity_src_nat.pdbx_ncbi_taxonomy_id 3673 _entity_src_nat.genus ? _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue seed _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 NCA non-polymer . NICOTINAMIDE ? 'C6 H6 N2 O' 122.125 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASP 1 1 1 ASP ASP B . n A 1 2 VAL 2 2 2 VAL VAL B . n A 1 3 SER 3 3 3 SER SER B . n A 1 4 PHE 4 4 4 PHE PHE B . n A 1 5 ARG 5 5 5 ARG ARG B . n A 1 6 LEU 6 6 6 LEU LEU B . n A 1 7 SER 7 7 7 SER SER B . n A 1 8 GLY 8 8 8 GLY GLY B . n A 1 9 ALA 9 9 9 ALA ALA B . n A 1 10 ASP 10 10 10 ASP ASP B . n A 1 11 PRO 11 11 11 PRO PRO B . n A 1 12 ARG 12 12 12 ARG ARG B . n A 1 13 SER 13 13 13 SER SER B . n A 1 14 TYR 14 14 14 TYR TYR B . n A 1 15 GLY 15 15 15 GLY GLY B . n A 1 16 MET 16 16 16 MET MET B . n A 1 17 PHE 17 17 17 PHE PHE B . n A 1 18 ILE 18 18 18 ILE ILE B . n A 1 19 LYS 19 19 19 LYS LYS B . n A 1 20 ASP 20 20 20 ASP ASP B . n A 1 21 LEU 21 21 21 LEU LEU B . n A 1 22 ARG 22 22 22 ARG ARG B . n A 1 23 ASN 23 23 23 ASN ASN B . n A 1 24 ALA 24 24 24 ALA ALA B . n A 1 25 LEU 25 25 25 LEU LEU B . n A 1 26 PRO 26 26 26 PRO PRO B . n A 1 27 PHE 27 27 27 PHE PHE B . n A 1 28 ARG 28 28 28 ARG ARG B . n A 1 29 GLU 29 29 29 GLU GLU B . n A 1 30 LYS 30 30 30 LYS LYS B . n A 1 31 VAL 31 31 31 VAL VAL B . n A 1 32 TYR 32 32 32 TYR TYR B . n A 1 33 ASN 33 33 33 ASN ASN B . n A 1 34 ILE 34 34 34 ILE ILE B . n A 1 35 PRO 35 35 35 PRO PRO B . n A 1 36 LEU 36 36 36 LEU LEU B . n A 1 37 LEU 37 37 37 LEU LEU B . n A 1 38 LEU 38 38 38 LEU LEU B . n A 1 39 PRO 39 39 39 PRO PRO B . n A 1 40 SER 40 40 40 SER SER B . n A 1 41 VAL 41 41 41 VAL VAL B . n A 1 42 SER 42 42 42 SER SER B . n A 1 43 GLY 43 43 43 GLY GLY B . n A 1 44 ALA 44 44 44 ALA ALA B . n A 1 45 GLY 45 45 45 GLY GLY B . n A 1 46 ARG 46 46 46 ARG ARG B . n A 1 47 TYR 47 47 47 TYR TYR B . n A 1 48 LEU 48 48 48 LEU LEU B . n A 1 49 LEU 49 49 49 LEU LEU B . n A 1 50 MET 50 50 50 MET MET B . n A 1 51 HIS 51 51 51 HIS HIS B . n A 1 52 LEU 52 52 52 LEU LEU B . n A 1 53 PHE 53 53 53 PHE PHE B . n A 1 54 ASN 54 54 54 ASN ASN B . n A 1 55 TYR 55 55 55 TYR TYR B . n A 1 56 ASP 56 56 56 ASP ASP B . n A 1 57 GLY 57 57 57 GLY GLY B . n A 1 58 LYS 58 58 58 LYS LYS B . n A 1 59 THR 59 59 59 THR THR B . n A 1 60 ILE 60 60 60 ILE ILE B . n A 1 61 THR 61 61 61 THR THR B . n A 1 62 VAL 62 62 62 VAL VAL B . n A 1 63 ALA 63 63 63 ALA ALA B . n A 1 64 VAL 64 64 64 VAL VAL B . n A 1 65 ASP 65 65 65 ASP ASP B . n A 1 66 VAL 66 66 66 VAL VAL B . n A 1 67 THR 67 67 67 THR THR B . n A 1 68 ASN 68 68 68 ASN ASN B . n A 1 69 VAL 69 69 69 VAL VAL B . n A 1 70 TYR 70 70 70 TYR TYR B . n A 1 71 ILE 71 71 71 ILE ILE B . n A 1 72 MET 72 72 72 MET MET B . n A 1 73 GLY 73 73 73 GLY GLY B . n A 1 74 TYR 74 74 74 TYR TYR B . n A 1 75 LEU 75 75 75 LEU LEU B . n A 1 76 ALA 76 76 76 ALA ALA B . n A 1 77 ASP 77 77 77 ASP ASP B . n A 1 78 THR 78 78 78 THR THR B . n A 1 79 THR 79 79 79 THR THR B . n A 1 80 SER 80 80 80 SER SER B . n A 1 81 TYR 81 81 81 TYR TYR B . n A 1 82 PHE 82 82 82 PHE PHE B . n A 1 83 PHE 83 83 83 PHE PHE B . n A 1 84 ASN 84 84 84 ASN ASN B . n A 1 85 GLU 85 85 85 GLU GLU B . n A 1 86 PRO 86 86 86 PRO PRO B . n A 1 87 ALA 87 87 87 ALA ALA B . n A 1 88 ALA 88 88 88 ALA ALA B . n A 1 89 GLU 89 89 89 GLU GLU B . n A 1 90 LEU 90 90 90 LEU LEU B . n A 1 91 ALA 91 91 91 ALA ALA B . n A 1 92 SER 92 92 92 SER SER B . n A 1 93 GLN 93 93 93 GLN GLN B . n A 1 94 TYR 94 94 94 TYR TYR B . n A 1 95 VAL 95 95 95 VAL VAL B . n A 1 96 PHE 96 96 96 PHE PHE B . n A 1 97 ARG 97 97 97 ARG ARG B . n A 1 98 ASP 98 98 98 ASP ASP B . n A 1 99 ALA 99 99 99 ALA ALA B . n A 1 100 ARG 100 100 100 ARG ARG B . n A 1 101 ARG 101 101 101 ARG ARG B . n A 1 102 LYS 102 102 102 LYS LYS B . n A 1 103 ILE 103 103 103 ILE ILE B . n A 1 104 THR 104 104 104 THR THR B . n A 1 105 LEU 105 105 105 LEU LEU B . n A 1 106 PRO 106 106 106 PRO PRO B . n A 1 107 TYR 107 107 107 TYR TYR B . n A 1 108 SER 108 108 108 SER SER B . n A 1 109 GLY 109 109 109 GLY GLY B . n A 1 110 ASN 110 110 110 ASN ASN B . n A 1 111 TYR 111 111 111 TYR TYR B . n A 1 112 GLU 112 112 112 GLU GLU B . n A 1 113 ARG 113 113 113 ARG ARG B . n A 1 114 LEU 114 114 114 LEU LEU B . n A 1 115 GLN 115 115 115 GLN GLN B . n A 1 116 ILE 116 116 116 ILE ILE B . n A 1 117 ALA 117 117 117 ALA ALA B . n A 1 118 ALA 118 118 118 ALA ALA B . n A 1 119 GLY 119 119 119 GLY GLY B . n A 1 120 LYS 120 120 120 LYS LYS B . n A 1 121 PRO 121 121 121 PRO PRO B . n A 1 122 ARG 122 122 122 ARG ARG B . n A 1 123 GLU 123 123 123 GLU GLU B . n A 1 124 LYS 124 124 124 LYS LYS B . n A 1 125 ILE 125 125 125 ILE ILE B . n A 1 126 PRO 126 126 126 PRO PRO B . n A 1 127 ILE 127 127 127 ILE ILE B . n A 1 128 GLY 128 128 128 GLY GLY B . n A 1 129 LEU 129 129 129 LEU LEU B . n A 1 130 PRO 130 130 130 PRO PRO B . n A 1 131 ALA 131 131 131 ALA ALA B . n A 1 132 LEU 132 132 132 LEU LEU B . n A 1 133 ASP 133 133 133 ASP ASP B . n A 1 134 SER 134 134 134 SER SER B . n A 1 135 ALA 135 135 135 ALA ALA B . n A 1 136 ILE 136 136 136 ILE ILE B . n A 1 137 SER 137 137 137 SER SER B . n A 1 138 THR 138 138 138 THR THR B . n A 1 139 LEU 139 139 139 LEU LEU B . n A 1 140 LEU 140 140 140 LEU LEU B . n A 1 141 HIS 141 141 141 HIS HIS B . n A 1 142 TYR 142 142 142 TYR TYR B . n A 1 143 ASP 143 143 143 ASP ASP B . n A 1 144 SER 144 144 144 SER SER B . n A 1 145 THR 145 145 145 THR THR B . n A 1 146 ALA 146 146 146 ALA ALA B . n A 1 147 ALA 147 147 147 ALA ALA B . n A 1 148 ALA 148 148 148 ALA ALA B . n A 1 149 GLY 149 149 149 GLY GLY B . n A 1 150 ALA 150 150 150 ALA ALA B . n A 1 151 LEU 151 151 151 LEU LEU B . n A 1 152 LEU 152 152 152 LEU LEU B . n A 1 153 VAL 153 153 153 VAL VAL B . n A 1 154 LEU 154 154 154 LEU LEU B . n A 1 155 ILE 155 155 155 ILE ILE B . n A 1 156 GLN 156 156 156 GLN GLN B . n A 1 157 THR 157 157 157 THR THR B . n A 1 158 THR 158 158 158 THR THR B . n A 1 159 ALA 159 159 159 ALA ALA B . n A 1 160 GLU 160 160 160 GLU GLU B . n A 1 161 ALA 161 161 161 ALA ALA B . n A 1 162 ALA 162 162 162 ALA ALA B . n A 1 163 ARG 163 163 163 ARG ARG B . n A 1 164 PHE 164 164 164 PHE PHE B . n A 1 165 LYS 165 165 165 LYS LYS B . n A 1 166 TYR 166 166 166 TYR TYR B . n A 1 167 ILE 167 167 167 ILE ILE B . n A 1 168 GLU 168 168 168 GLU GLU B . n A 1 169 GLN 169 169 169 GLN GLN B . n A 1 170 GLN 170 170 170 GLN GLN B . n A 1 171 ILE 171 171 171 ILE ILE B . n A 1 172 GLN 172 172 172 GLN GLN B . n A 1 173 GLU 173 173 173 GLU GLU B . n A 1 174 ARG 174 174 174 ARG ARG B . n A 1 175 ALA 175 175 175 ALA ALA B . n A 1 176 TYR 176 176 176 TYR TYR B . n A 1 177 ARG 177 177 177 ARG ARG B . n A 1 178 ASP 178 178 178 ASP ASP B . n A 1 179 GLU 179 179 179 GLU GLU B . n A 1 180 VAL 180 180 180 VAL VAL B . n A 1 181 PRO 181 181 181 PRO PRO B . n A 1 182 SER 182 182 182 SER SER B . n A 1 183 LEU 183 183 183 LEU LEU B . n A 1 184 ALA 184 184 184 ALA ALA B . n A 1 185 THR 185 185 185 THR THR B . n A 1 186 ILE 186 186 186 ILE ILE B . n A 1 187 SER 187 187 187 SER SER B . n A 1 188 LEU 188 188 188 LEU LEU B . n A 1 189 GLU 189 189 189 GLU GLU B . n A 1 190 ASN 190 190 190 ASN ASN B . n A 1 191 SER 191 191 191 SER SER B . n A 1 192 TRP 192 192 192 TRP TRP B . n A 1 193 SER 193 193 193 SER SER B . n A 1 194 GLY 194 194 194 GLY GLY B . n A 1 195 LEU 195 195 195 LEU LEU B . n A 1 196 SER 196 196 196 SER SER B . n A 1 197 LYS 197 197 197 LYS LYS B . n A 1 198 GLN 198 198 198 GLN GLN B . n A 1 199 ILE 199 199 199 ILE ILE B . n A 1 200 GLN 200 200 200 GLN GLN B . n A 1 201 LEU 201 201 201 LEU LEU B . n A 1 202 ALA 202 202 202 ALA ALA B . n A 1 203 GLN 203 203 203 GLN GLN B . n A 1 204 GLY 204 204 204 GLY GLY B . n A 1 205 ASN 205 205 205 ASN ASN B . n A 1 206 ASN 206 206 206 ASN ASN B . n A 1 207 GLY 207 207 207 GLY GLY B . n A 1 208 ILE 208 208 208 ILE ILE B . n A 1 209 PHE 209 209 209 PHE PHE B . n A 1 210 ARG 210 210 210 ARG ARG B . n A 1 211 THR 211 211 211 THR THR B . n A 1 212 PRO 212 212 212 PRO PRO B . n A 1 213 ILE 213 213 213 ILE ILE B . n A 1 214 VAL 214 214 214 VAL VAL B . n A 1 215 LEU 215 215 215 LEU LEU B . n A 1 216 VAL 216 216 216 VAL VAL B . n A 1 217 ASP 217 217 217 ASP ASP B . n A 1 218 ASN 218 218 218 ASN ASN B . n A 1 219 LYS 219 219 219 LYS LYS B . n A 1 220 GLY 220 220 220 GLY GLY B . n A 1 221 ASN 221 221 221 ASN ASN B . n A 1 222 ARG 222 222 222 ARG ARG B . n A 1 223 VAL 223 223 223 VAL VAL B . n A 1 224 GLN 224 224 224 GLN GLN B . n A 1 225 ILE 225 225 225 ILE ILE B . n A 1 226 THR 226 226 226 THR THR B . n A 1 227 ASN 227 227 227 ASN ASN B . n A 1 228 VAL 228 228 228 VAL VAL B . n A 1 229 THR 229 229 229 THR THR B . n A 1 230 SER 230 230 230 SER SER B . n A 1 231 LYS 231 231 231 LYS LYS B . n A 1 232 VAL 232 232 232 VAL VAL B . n A 1 233 VAL 233 233 233 VAL VAL B . n A 1 234 THR 234 234 234 THR THR B . n A 1 235 SER 235 235 235 SER SER B . n A 1 236 ASN 236 236 236 ASN ASN B . n A 1 237 ILE 237 237 237 ILE ILE B . n A 1 238 GLN 238 238 238 GLN GLN B . n A 1 239 LEU 239 239 239 LEU LEU B . n A 1 240 LEU 240 240 240 LEU LEU B . n A 1 241 LEU 241 241 241 LEU LEU B . n A 1 242 ASN 242 242 242 ASN ASN B . n A 1 243 THR 243 243 243 THR THR B . n A 1 244 ARG 244 244 244 ARG ARG B . n A 1 245 ASN 245 245 245 ASN ASN B . n A 1 246 ILE 246 246 246 ILE ILE B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NAG 1 301 301 NAG NAG B . C 3 NCA 1 302 1 NCA NIC B . D 4 HOH 1 401 214 HOH HOH B . D 4 HOH 2 402 241 HOH HOH B . D 4 HOH 3 403 138 HOH HOH B . D 4 HOH 4 404 221 HOH HOH B . D 4 HOH 5 405 86 HOH HOH B . D 4 HOH 6 406 83 HOH HOH B . D 4 HOH 7 407 217 HOH HOH B . D 4 HOH 8 408 223 HOH HOH B . D 4 HOH 9 409 177 HOH HOH B . D 4 HOH 10 410 263 HOH HOH B . D 4 HOH 11 411 160 HOH HOH B . D 4 HOH 12 412 53 HOH HOH B . D 4 HOH 13 413 244 HOH HOH B . D 4 HOH 14 414 28 HOH HOH B . D 4 HOH 15 415 149 HOH HOH B . D 4 HOH 16 416 124 HOH HOH B . D 4 HOH 17 417 184 HOH HOH B . D 4 HOH 18 418 146 HOH HOH B . D 4 HOH 19 419 209 HOH HOH B . D 4 HOH 20 420 220 HOH HOH B . D 4 HOH 21 421 71 HOH HOH B . D 4 HOH 22 422 106 HOH HOH B . D 4 HOH 23 423 89 HOH HOH B . D 4 HOH 24 424 67 HOH HOH B . D 4 HOH 25 425 77 HOH HOH B . D 4 HOH 26 426 69 HOH HOH B . D 4 HOH 27 427 132 HOH HOH B . D 4 HOH 28 428 44 HOH HOH B . D 4 HOH 29 429 73 HOH HOH B . D 4 HOH 30 430 14 HOH HOH B . D 4 HOH 31 431 46 HOH HOH B . D 4 HOH 32 432 22 HOH HOH B . D 4 HOH 33 433 2 HOH HOH B . D 4 HOH 34 434 228 HOH HOH B . D 4 HOH 35 435 17 HOH HOH B . D 4 HOH 36 436 29 HOH HOH B . D 4 HOH 37 437 131 HOH HOH B . D 4 HOH 38 438 62 HOH HOH B . D 4 HOH 39 439 162 HOH HOH B . D 4 HOH 40 440 4 HOH HOH B . D 4 HOH 41 441 74 HOH HOH B . D 4 HOH 42 442 153 HOH HOH B . D 4 HOH 43 443 63 HOH HOH B . D 4 HOH 44 444 128 HOH HOH B . D 4 HOH 45 445 240 HOH HOH B . D 4 HOH 46 446 120 HOH HOH B . D 4 HOH 47 447 12 HOH HOH B . D 4 HOH 48 448 9 HOH HOH B . D 4 HOH 49 449 141 HOH HOH B . D 4 HOH 50 450 215 HOH HOH B . D 4 HOH 51 451 6 HOH HOH B . D 4 HOH 52 452 235 HOH HOH B . D 4 HOH 53 453 1 HOH HOH B . D 4 HOH 54 454 21 HOH HOH B . D 4 HOH 55 455 65 HOH HOH B . D 4 HOH 56 456 165 HOH HOH B . D 4 HOH 57 457 42 HOH HOH B . D 4 HOH 58 458 154 HOH HOH B . D 4 HOH 59 459 32 HOH HOH B . D 4 HOH 60 460 222 HOH HOH B . D 4 HOH 61 461 50 HOH HOH B . D 4 HOH 62 462 139 HOH HOH B . D 4 HOH 63 463 150 HOH HOH B . D 4 HOH 64 464 19 HOH HOH B . D 4 HOH 65 465 41 HOH HOH B . D 4 HOH 66 466 49 HOH HOH B . D 4 HOH 67 467 259 HOH HOH B . D 4 HOH 68 468 36 HOH HOH B . D 4 HOH 69 469 52 HOH HOH B . D 4 HOH 70 470 13 HOH HOH B . D 4 HOH 71 471 48 HOH HOH B . D 4 HOH 72 472 260 HOH HOH B . D 4 HOH 73 473 175 HOH HOH B . D 4 HOH 74 474 107 HOH HOH B . D 4 HOH 75 475 137 HOH HOH B . D 4 HOH 76 476 140 HOH HOH B . D 4 HOH 77 477 133 HOH HOH B . D 4 HOH 78 478 145 HOH HOH B . D 4 HOH 79 479 204 HOH HOH B . D 4 HOH 80 480 155 HOH HOH B . D 4 HOH 81 481 81 HOH HOH B . D 4 HOH 82 482 119 HOH HOH B . D 4 HOH 83 483 147 HOH HOH B . D 4 HOH 84 484 80 HOH HOH B . D 4 HOH 85 485 43 HOH HOH B . D 4 HOH 86 486 247 HOH HOH B . D 4 HOH 87 487 109 HOH HOH B . D 4 HOH 88 488 15 HOH HOH B . D 4 HOH 89 489 151 HOH HOH B . D 4 HOH 90 490 167 HOH HOH B . D 4 HOH 91 491 59 HOH HOH B . D 4 HOH 92 492 16 HOH HOH B . D 4 HOH 93 493 225 HOH HOH B . D 4 HOH 94 494 174 HOH HOH B . D 4 HOH 95 495 57 HOH HOH B . D 4 HOH 96 496 18 HOH HOH B . D 4 HOH 97 497 84 HOH HOH B . D 4 HOH 98 498 96 HOH HOH B . D 4 HOH 99 499 171 HOH HOH B . D 4 HOH 100 500 195 HOH HOH B . D 4 HOH 101 501 254 HOH HOH B . D 4 HOH 102 502 24 HOH HOH B . D 4 HOH 103 503 78 HOH HOH B . D 4 HOH 104 504 111 HOH HOH B . D 4 HOH 105 505 30 HOH HOH B . D 4 HOH 106 506 31 HOH HOH B . D 4 HOH 107 507 262 HOH HOH B . D 4 HOH 108 508 108 HOH HOH B . D 4 HOH 109 509 93 HOH HOH B . D 4 HOH 110 510 75 HOH HOH B . D 4 HOH 111 511 79 HOH HOH B . D 4 HOH 112 512 101 HOH HOH B . D 4 HOH 113 513 161 HOH HOH B . D 4 HOH 114 514 91 HOH HOH B . D 4 HOH 115 515 144 HOH HOH B . D 4 HOH 116 516 92 HOH HOH B . D 4 HOH 117 517 40 HOH HOH B . D 4 HOH 118 518 110 HOH HOH B . D 4 HOH 119 519 72 HOH HOH B . D 4 HOH 120 520 239 HOH HOH B . D 4 HOH 121 521 230 HOH HOH B . D 4 HOH 122 522 94 HOH HOH B . D 4 HOH 123 523 97 HOH HOH B . D 4 HOH 124 524 47 HOH HOH B . D 4 HOH 125 525 105 HOH HOH B . D 4 HOH 126 526 185 HOH HOH B . D 4 HOH 127 527 82 HOH HOH B . D 4 HOH 128 528 60 HOH HOH B . D 4 HOH 129 529 33 HOH HOH B . D 4 HOH 130 530 56 HOH HOH B . D 4 HOH 131 531 8 HOH HOH B . D 4 HOH 132 532 76 HOH HOH B . D 4 HOH 133 533 173 HOH HOH B . D 4 HOH 134 534 26 HOH HOH B . D 4 HOH 135 535 157 HOH HOH B . D 4 HOH 136 536 135 HOH HOH B . D 4 HOH 137 537 61 HOH HOH B . D 4 HOH 138 538 200 HOH HOH B . D 4 HOH 139 539 35 HOH HOH B . D 4 HOH 140 540 45 HOH HOH B . D 4 HOH 141 541 224 HOH HOH B . D 4 HOH 142 542 190 HOH HOH B . D 4 HOH 143 543 252 HOH HOH B . D 4 HOH 144 544 7 HOH HOH B . D 4 HOH 145 545 66 HOH HOH B . D 4 HOH 146 546 54 HOH HOH B . D 4 HOH 147 547 208 HOH HOH B . D 4 HOH 148 548 199 HOH HOH B . D 4 HOH 149 549 25 HOH HOH B . D 4 HOH 150 550 189 HOH HOH B . D 4 HOH 151 551 5 HOH HOH B . D 4 HOH 152 552 102 HOH HOH B . D 4 HOH 153 553 129 HOH HOH B . D 4 HOH 154 554 213 HOH HOH B . D 4 HOH 155 555 218 HOH HOH B . D 4 HOH 156 556 212 HOH HOH B . D 4 HOH 157 557 68 HOH HOH B . D 4 HOH 158 558 243 HOH HOH B . D 4 HOH 159 559 37 HOH HOH B . D 4 HOH 160 560 90 HOH HOH B . D 4 HOH 161 561 3 HOH HOH B . D 4 HOH 162 562 98 HOH HOH B . D 4 HOH 163 563 20 HOH HOH B . D 4 HOH 164 564 38 HOH HOH B . D 4 HOH 165 565 211 HOH HOH B . D 4 HOH 166 566 115 HOH HOH B . D 4 HOH 167 567 187 HOH HOH B . D 4 HOH 168 568 39 HOH HOH B . D 4 HOH 169 569 148 HOH HOH B . D 4 HOH 170 570 55 HOH HOH B . D 4 HOH 171 571 34 HOH HOH B . D 4 HOH 172 572 51 HOH HOH B . D 4 HOH 173 573 183 HOH HOH B . D 4 HOH 174 574 121 HOH HOH B . D 4 HOH 175 575 143 HOH HOH B . D 4 HOH 176 576 10 HOH HOH B . D 4 HOH 177 577 114 HOH HOH B . D 4 HOH 178 578 87 HOH HOH B . D 4 HOH 179 579 270 HOH HOH B . D 4 HOH 180 580 210 HOH HOH B . D 4 HOH 181 581 186 HOH HOH B . D 4 HOH 182 582 27 HOH HOH B . D 4 HOH 183 583 233 HOH HOH B . D 4 HOH 184 584 104 HOH HOH B . D 4 HOH 185 585 170 HOH HOH B . D 4 HOH 186 586 136 HOH HOH B . D 4 HOH 187 587 250 HOH HOH B . D 4 HOH 188 588 23 HOH HOH B . D 4 HOH 189 589 123 HOH HOH B . D 4 HOH 190 590 172 HOH HOH B . D 4 HOH 191 591 159 HOH HOH B . D 4 HOH 192 592 258 HOH HOH B . D 4 HOH 193 593 238 HOH HOH B . D 4 HOH 194 594 201 HOH HOH B . D 4 HOH 195 595 70 HOH HOH B . D 4 HOH 196 596 234 HOH HOH B . D 4 HOH 197 597 194 HOH HOH B . D 4 HOH 198 598 264 HOH HOH B . D 4 HOH 199 599 207 HOH HOH B . D 4 HOH 200 600 58 HOH HOH B . D 4 HOH 201 601 176 HOH HOH B . D 4 HOH 202 602 180 HOH HOH B . D 4 HOH 203 603 163 HOH HOH B . D 4 HOH 204 604 130 HOH HOH B . D 4 HOH 205 605 268 HOH HOH B . D 4 HOH 206 606 227 HOH HOH B . D 4 HOH 207 607 251 HOH HOH B . D 4 HOH 208 608 95 HOH HOH B . D 4 HOH 209 609 166 HOH HOH B . D 4 HOH 210 610 116 HOH HOH B . D 4 HOH 211 611 248 HOH HOH B . D 4 HOH 212 612 158 HOH HOH B . D 4 HOH 213 613 117 HOH HOH B . D 4 HOH 214 614 113 HOH HOH B . D 4 HOH 215 615 178 HOH HOH B . D 4 HOH 216 616 181 HOH HOH B . D 4 HOH 217 617 231 HOH HOH B . D 4 HOH 218 618 156 HOH HOH B . D 4 HOH 219 619 232 HOH HOH B . D 4 HOH 220 620 205 HOH HOH B . D 4 HOH 221 621 246 HOH HOH B . D 4 HOH 222 622 193 HOH HOH B . D 4 HOH 223 623 253 HOH HOH B . D 4 HOH 224 624 266 HOH HOH B . D 4 HOH 225 625 103 HOH HOH B . D 4 HOH 226 626 216 HOH HOH B . D 4 HOH 227 627 118 HOH HOH B . D 4 HOH 228 628 126 HOH HOH B . D 4 HOH 229 629 267 HOH HOH B . D 4 HOH 230 630 196 HOH HOH B . D 4 HOH 231 631 64 HOH HOH B . D 4 HOH 232 632 272 HOH HOH B . D 4 HOH 233 633 191 HOH HOH B . D 4 HOH 234 634 182 HOH HOH B . D 4 HOH 235 635 236 HOH HOH B . D 4 HOH 236 636 188 HOH HOH B . D 4 HOH 237 637 245 HOH HOH B . D 4 HOH 238 638 134 HOH HOH B . D 4 HOH 239 639 202 HOH HOH B . D 4 HOH 240 640 125 HOH HOH B . D 4 HOH 241 641 197 HOH HOH B . D 4 HOH 242 642 203 HOH HOH B . D 4 HOH 243 643 256 HOH HOH B . D 4 HOH 244 644 249 HOH HOH B . D 4 HOH 245 645 11 HOH HOH B . D 4 HOH 246 646 242 HOH HOH B . D 4 HOH 247 647 85 HOH HOH B . D 4 HOH 248 648 169 HOH HOH B . D 4 HOH 249 649 226 HOH HOH B . D 4 HOH 250 650 112 HOH HOH B . D 4 HOH 251 651 219 HOH HOH B . D 4 HOH 252 652 88 HOH HOH B . D 4 HOH 253 653 179 HOH HOH B . D 4 HOH 254 654 257 HOH HOH B . D 4 HOH 255 655 269 HOH HOH B . D 4 HOH 256 656 229 HOH HOH B . D 4 HOH 257 657 164 HOH HOH B . D 4 HOH 258 658 261 HOH HOH B . D 4 HOH 259 659 127 HOH HOH B . D 4 HOH 260 660 100 HOH HOH B . D 4 HOH 261 661 198 HOH HOH B . D 4 HOH 262 662 237 HOH HOH B . D 4 HOH 263 663 265 HOH HOH B . D 4 HOH 264 664 271 HOH HOH B . D 4 HOH 265 665 255 HOH HOH B . D 4 HOH 266 666 99 HOH HOH B . D 4 HOH 267 667 168 HOH HOH B . D 4 HOH 268 668 142 HOH HOH B . D 4 HOH 269 669 122 HOH HOH B . D 4 HOH 270 670 206 HOH HOH B . D 4 HOH 271 671 152 HOH HOH B . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(phenix.refine: 1.8.4_1496)' 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? xia2 ? ? ? . 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.15 3 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 5 # _cell.entry_id 4YP2 _cell.length_a 130.100 _cell.length_b 130.100 _cell.length_c 37.570 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 9 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4YP2 _symmetry.space_group_name_H-M 'H 3' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 4YP2 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.23 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 44.93 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details 'PEG 4000, sodium phosphate' _exptl_crystal_grow.pdbx_pH_range 7 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M-F' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2015-02-12 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.979 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'DIAMOND BEAMLINE I04' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.979 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline I04 _diffrn_source.pdbx_synchrotron_site Diamond # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 4YP2 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.35 _reflns.d_resolution_low 37.56 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 51799 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.4 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 3.3 _reflns.pdbx_Rmerge_I_obs 0.027 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 16.8 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.35 _reflns_shell.d_res_low 1.39 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 1.4 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all 3869 _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all 99.6 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.81 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4YP2 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 51794 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.01 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 37.557 _refine.ls_d_res_high 1.350 _refine.ls_percent_reflns_obs 99.40 _refine.ls_R_factor_obs 0.1417 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1403 _refine.ls_R_factor_R_free 0.1682 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.18 _refine.ls_number_reflns_R_free 2682 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.details ? _refine.pdbx_starting_model 1MOM _refine.pdbx_method_to_determine_struct MIR _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.15 _refine.pdbx_overall_phase_error 19.09 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1933 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 23 _refine_hist.number_atoms_solvent 271 _refine_hist.number_atoms_total 2227 _refine_hist.d_res_high 1.350 _refine_hist.d_res_low 37.557 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.007 ? ? 2037 'X-RAY DIFFRACTION' ? f_angle_d 1.156 ? ? 2778 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 13.124 ? ? 767 'X-RAY DIFFRACTION' ? f_chiral_restr 0.067 ? ? 322 'X-RAY DIFFRACTION' ? f_plane_restr 0.006 ? ? 361 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all 'X-RAY DIFFRACTION' . 1.3501 1.3746 2593 0.2675 100.00 0.3148 . . 126 . . 'X-RAY DIFFRACTION' . 1.3746 1.4011 2612 0.2367 100.00 0.3090 . . 130 . . 'X-RAY DIFFRACTION' . 1.4011 1.4297 2608 0.2170 100.00 0.2413 . . 144 . . 'X-RAY DIFFRACTION' . 1.4297 1.4608 2549 0.2002 99.00 0.2699 . . 183 . . 'X-RAY DIFFRACTION' . 1.4608 1.4947 2580 0.1835 100.00 0.2425 . . 144 . . 'X-RAY DIFFRACTION' . 1.4947 1.5321 2570 0.1633 99.00 0.2123 . . 153 . . 'X-RAY DIFFRACTION' . 1.5321 1.5736 2580 0.1501 100.00 0.2273 . . 141 . . 'X-RAY DIFFRACTION' . 1.5736 1.6199 2612 0.1454 100.00 0.2040 . . 123 . . 'X-RAY DIFFRACTION' . 1.6199 1.6721 2575 0.1414 99.00 0.1970 . . 153 . . 'X-RAY DIFFRACTION' . 1.6721 1.7319 2580 0.1324 99.00 0.2059 . . 151 . . 'X-RAY DIFFRACTION' . 1.7319 1.8012 2632 0.1308 100.00 0.1901 . . 103 . . 'X-RAY DIFFRACTION' . 1.8012 1.8832 2587 0.1243 100.00 0.1906 . . 144 . . 'X-RAY DIFFRACTION' . 1.8832 1.9825 2588 0.1276 99.00 0.1653 . . 129 . . 'X-RAY DIFFRACTION' . 1.9825 2.1067 2554 0.1181 99.00 0.1364 . . 144 . . 'X-RAY DIFFRACTION' . 2.1067 2.2693 2591 0.1207 99.00 0.1526 . . 131 . . 'X-RAY DIFFRACTION' . 2.2693 2.4977 2590 0.1237 99.00 0.1589 . . 156 . . 'X-RAY DIFFRACTION' . 2.4977 2.8590 2528 0.1288 99.00 0.1534 . . 174 . . 'X-RAY DIFFRACTION' . 2.8590 3.6016 2610 0.1341 99.00 0.1295 . . 118 . . 'X-RAY DIFFRACTION' . 3.6016 37.5712 2573 0.1503 99.00 0.1641 . . 135 . . # _struct.entry_id 4YP2 _struct.title 'Cleavage of nicotinamide adenine dinucleotides by the ribosome inactivating protein from Momordica charantia' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 4YP2 _struct_keywords.text 'Ribosome inactivating protein, N-glycosidase, nicotinamide, complex, hydrolase' _struct_keywords.pdbx_keywords HYDROLASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code RIP1_MOMCH _struct_ref.pdbx_db_accession P16094 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;DVSFRLSGADPRSYGMFIKDLRNALPFREKVYNIPLLLPSVSGAGRYLLMHLFNYDGKTITVAVDVTNVYIMGYLADTTS YFFNEPAAELASQYVFRDARRKITLPYSGNYERLQIAAGKPREKIPIGLPALDSAISTLLHYDSTAAAGALLVLIQTTAE AARFKYIEQQIQERAYRDEVPSLATISLENSWSGLSKQIQLAQGNNGIFRTPIVLVDNKGNRVQITNVTSKVVTSNIQLL LNTRNI ; _struct_ref.pdbx_align_begin 24 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4YP2 _struct_ref_seq.pdbx_strand_id B _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 246 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P16094 _struct_ref_seq.db_align_beg 24 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 269 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 246 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 570 ? 1 MORE 8 ? 1 'SSA (A^2)' 11590 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASP A 10 ? ALA A 24 ? ASP B 10 ALA B 24 1 ? 15 HELX_P HELX_P2 AA2 SER A 42 ? GLY A 45 ? SER B 42 GLY B 45 5 ? 4 HELX_P HELX_P3 AA3 GLU A 85 ? SER A 92 ? GLU B 85 SER B 92 1 ? 8 HELX_P HELX_P4 AA4 ASN A 110 ? GLY A 119 ? ASN B 110 GLY B 119 1 ? 10 HELX_P HELX_P5 AA5 PRO A 121 ? ILE A 125 ? PRO B 121 ILE B 125 5 ? 5 HELX_P HELX_P6 AA6 GLY A 128 ? LEU A 140 ? GLY B 128 LEU B 140 1 ? 13 HELX_P HELX_P7 AA7 ASP A 143 ? THR A 158 ? ASP B 143 THR B 158 1 ? 16 HELX_P HELX_P8 AA8 THR A 158 ? PHE A 164 ? THR B 158 PHE B 164 1 ? 7 HELX_P HELX_P9 AA9 PHE A 164 ? ARG A 174 ? PHE B 164 ARG B 174 1 ? 11 HELX_P HELX_P10 AB1 SER A 182 ? SER A 191 ? SER B 182 SER B 191 1 ? 10 HELX_P HELX_P11 AB2 SER A 191 ? GLN A 203 ? SER B 191 GLN B 203 1 ? 13 HELX_P HELX_P12 AB3 SER A 230 ? SER A 235 ? SER B 230 SER B 235 1 ? 6 HELX_P HELX_P13 AB4 ASN A 242 ? ILE A 246 ? ASN B 242 ILE B 246 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id covale1 _struct_conn.conn_type_id covale _struct_conn.pdbx_leaving_atom_flag one _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id ASN _struct_conn.ptnr1_label_seq_id 227 _struct_conn.ptnr1_label_atom_id ND2 _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_comp_id NAG _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_label_atom_id C1 _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id B _struct_conn.ptnr1_auth_comp_id ASN _struct_conn.ptnr1_auth_seq_id 227 _struct_conn.ptnr2_auth_asym_id B _struct_conn.ptnr2_auth_comp_id NAG _struct_conn.ptnr2_auth_seq_id 301 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 1.445 _struct_conn.pdbx_value_order ? _struct_conn.pdbx_role N-Glycosylation # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _pdbx_modification_feature.ordinal 1 _pdbx_modification_feature.label_comp_id NAG _pdbx_modification_feature.label_asym_id B _pdbx_modification_feature.label_seq_id . _pdbx_modification_feature.label_alt_id ? _pdbx_modification_feature.modified_residue_label_comp_id ASN _pdbx_modification_feature.modified_residue_label_asym_id A _pdbx_modification_feature.modified_residue_label_seq_id 227 _pdbx_modification_feature.modified_residue_label_alt_id ? _pdbx_modification_feature.auth_comp_id NAG _pdbx_modification_feature.auth_asym_id B _pdbx_modification_feature.auth_seq_id 301 _pdbx_modification_feature.PDB_ins_code ? _pdbx_modification_feature.symmetry 1_555 _pdbx_modification_feature.modified_residue_auth_comp_id ASN _pdbx_modification_feature.modified_residue_auth_asym_id B _pdbx_modification_feature.modified_residue_auth_seq_id 227 _pdbx_modification_feature.modified_residue_PDB_ins_code ? _pdbx_modification_feature.modified_residue_symmetry 1_555 _pdbx_modification_feature.comp_id_linking_atom C1 _pdbx_modification_feature.modified_residue_id_linking_atom ND2 _pdbx_modification_feature.modified_residue_id ASN _pdbx_modification_feature.ref_pcm_id 1 _pdbx_modification_feature.ref_comp_id NAG _pdbx_modification_feature.type N-Glycosylation _pdbx_modification_feature.category Carbohydrate # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 6 ? AA2 ? 2 ? AA3 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA1 5 6 ? parallel AA2 1 2 ? anti-parallel AA3 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 VAL A 2 ? ARG A 5 ? VAL B 2 ARG B 5 AA1 2 TYR A 47 ? PHE A 53 ? TYR B 47 PHE B 53 AA1 3 THR A 59 ? ASP A 65 ? THR B 59 ASP B 65 AA1 4 ILE A 71 ? ALA A 76 ? ILE B 71 ALA B 76 AA1 5 THR A 79 ? PHE A 82 ? THR B 79 PHE B 82 AA1 6 ARG A 101 ? THR A 104 ? ARG B 101 THR B 104 AA2 1 PHE A 27 ? VAL A 31 ? PHE B 27 VAL B 31 AA2 2 ILE A 34 ? LEU A 37 ? ILE B 34 LEU B 37 AA3 1 ILE A 208 ? VAL A 216 ? ILE B 208 VAL B 216 AA3 2 ARG A 222 ? ASN A 227 ? ARG B 222 ASN B 227 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N VAL A 2 ? N VAL B 2 O HIS A 51 ? O HIS B 51 AA1 2 3 N MET A 50 ? N MET B 50 O VAL A 62 ? O VAL B 62 AA1 3 4 N ALA A 63 ? N ALA B 63 O MET A 72 ? O MET B 72 AA1 4 5 N ALA A 76 ? N ALA B 76 O THR A 79 ? O THR B 79 AA1 5 6 N SER A 80 ? N SER B 80 O ILE A 103 ? O ILE B 103 AA2 1 2 N GLU A 29 ? N GLU B 29 O LEU A 36 ? O LEU B 36 AA3 1 2 N ILE A 213 ? N ILE B 213 O ILE A 225 ? O ILE B 225 # _pdbx_entry_details.entry_id 4YP2 _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O B HOH 401 ? ? O B HOH 556 ? ? 1.85 2 1 O B HOH 462 ? ? O B HOH 499 ? ? 1.90 3 1 O B HOH 663 ? ? O B HOH 664 ? ? 1.95 4 1 O B HOH 612 ? ? O B HOH 618 ? ? 1.98 5 1 O B HOH 621 ? ? O B HOH 649 ? ? 1.99 6 1 O B HOH 460 ? ? O B HOH 637 ? ? 2.03 7 1 O B HOH 408 ? ? O B HOH 583 ? ? 2.06 8 1 O B HOH 567 ? ? O B HOH 583 ? ? 2.06 9 1 O B HOH 538 ? ? O B HOH 620 ? ? 2.11 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O B HOH 434 ? ? 1_555 O B HOH 632 ? ? 1_556 1.88 2 1 O B HOH 547 ? ? 1_555 O B HOH 643 ? ? 9_445 2.17 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP B 77 ? ? 59.72 -110.37 2 1 PRO B 106 ? ? -84.54 44.58 3 1 THR B 158 ? ? -119.26 -80.58 4 1 ASN B 236 ? ? -98.69 -70.76 5 1 ASN B 236 ? ? -85.01 -70.76 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 HIS N N N N 123 HIS CA C N S 124 HIS C C N N 125 HIS O O N N 126 HIS CB C N N 127 HIS CG C Y N 128 HIS ND1 N Y N 129 HIS CD2 C Y N 130 HIS CE1 C Y N 131 HIS NE2 N Y N 132 HIS OXT O N N 133 HIS H H N N 134 HIS H2 H N N 135 HIS HA H N N 136 HIS HB2 H N N 137 HIS HB3 H N N 138 HIS HD1 H N N 139 HIS HD2 H N N 140 HIS HE1 H N N 141 HIS HE2 H N N 142 HIS HXT H N N 143 HOH O O N N 144 HOH H1 H N N 145 HOH H2 H N N 146 ILE N N N N 147 ILE CA C N S 148 ILE C C N N 149 ILE O O N N 150 ILE CB C N S 151 ILE CG1 C N N 152 ILE CG2 C N N 153 ILE CD1 C N N 154 ILE OXT O N N 155 ILE H H N N 156 ILE H2 H N N 157 ILE HA H N N 158 ILE HB H N N 159 ILE HG12 H N N 160 ILE HG13 H N N 161 ILE HG21 H N N 162 ILE HG22 H N N 163 ILE HG23 H N N 164 ILE HD11 H N N 165 ILE HD12 H N N 166 ILE HD13 H N N 167 ILE HXT H N N 168 LEU N N N N 169 LEU CA C N S 170 LEU C C N N 171 LEU O O N N 172 LEU CB C N N 173 LEU CG C N N 174 LEU CD1 C N N 175 LEU CD2 C N N 176 LEU OXT O N N 177 LEU H H N N 178 LEU H2 H N N 179 LEU HA H N N 180 LEU HB2 H N N 181 LEU HB3 H N N 182 LEU HG H N N 183 LEU HD11 H N N 184 LEU HD12 H N N 185 LEU HD13 H N N 186 LEU HD21 H N N 187 LEU HD22 H N N 188 LEU HD23 H N N 189 LEU HXT H N N 190 LYS N N N N 191 LYS CA C N S 192 LYS C C N N 193 LYS O O N N 194 LYS CB C N N 195 LYS CG C N N 196 LYS CD C N N 197 LYS CE C N N 198 LYS NZ N N N 199 LYS OXT O N N 200 LYS H H N N 201 LYS H2 H N N 202 LYS HA H N N 203 LYS HB2 H N N 204 LYS HB3 H N N 205 LYS HG2 H N N 206 LYS HG3 H N N 207 LYS HD2 H N N 208 LYS HD3 H N N 209 LYS HE2 H N N 210 LYS HE3 H N N 211 LYS HZ1 H N N 212 LYS HZ2 H N N 213 LYS HZ3 H N N 214 LYS HXT H N N 215 MET N N N N 216 MET CA C N S 217 MET C C N N 218 MET O O N N 219 MET CB C N N 220 MET CG C N N 221 MET SD S N N 222 MET CE C N N 223 MET OXT O N N 224 MET H H N N 225 MET H2 H N N 226 MET HA H N N 227 MET HB2 H N N 228 MET HB3 H N N 229 MET HG2 H N N 230 MET HG3 H N N 231 MET HE1 H N N 232 MET HE2 H N N 233 MET HE3 H N N 234 MET HXT H N N 235 NAG C1 C N R 236 NAG C2 C N R 237 NAG C3 C N R 238 NAG C4 C N S 239 NAG C5 C N R 240 NAG C6 C N N 241 NAG C7 C N N 242 NAG C8 C N N 243 NAG N2 N N N 244 NAG O1 O N N 245 NAG O3 O N N 246 NAG O4 O N N 247 NAG O5 O N N 248 NAG O6 O N N 249 NAG O7 O N N 250 NAG H1 H N N 251 NAG H2 H N N 252 NAG H3 H N N 253 NAG H4 H N N 254 NAG H5 H N N 255 NAG H61 H N N 256 NAG H62 H N N 257 NAG H81 H N N 258 NAG H82 H N N 259 NAG H83 H N N 260 NAG HN2 H N N 261 NAG HO1 H N N 262 NAG HO3 H N N 263 NAG HO4 H N N 264 NAG HO6 H N N 265 NCA N1 N Y N 266 NCA C2 C Y N 267 NCA C3 C Y N 268 NCA C4 C Y N 269 NCA C5 C Y N 270 NCA C6 C Y N 271 NCA C7 C N N 272 NCA O7 O N N 273 NCA N7 N N N 274 NCA H2 H N N 275 NCA H4 H N N 276 NCA H5 H N N 277 NCA H6 H N N 278 NCA HN71 H N N 279 NCA HN72 H N N 280 PHE N N N N 281 PHE CA C N S 282 PHE C C N N 283 PHE O O N N 284 PHE CB C N N 285 PHE CG C Y N 286 PHE CD1 C Y N 287 PHE CD2 C Y N 288 PHE CE1 C Y N 289 PHE CE2 C Y N 290 PHE CZ C Y N 291 PHE OXT O N N 292 PHE H H N N 293 PHE H2 H N N 294 PHE HA H N N 295 PHE HB2 H N N 296 PHE HB3 H N N 297 PHE HD1 H N N 298 PHE HD2 H N N 299 PHE HE1 H N N 300 PHE HE2 H N N 301 PHE HZ H N N 302 PHE HXT H N N 303 PRO N N N N 304 PRO CA C N S 305 PRO C C N N 306 PRO O O N N 307 PRO CB C N N 308 PRO CG C N N 309 PRO CD C N N 310 PRO OXT O N N 311 PRO H H N N 312 PRO HA H N N 313 PRO HB2 H N N 314 PRO HB3 H N N 315 PRO HG2 H N N 316 PRO HG3 H N N 317 PRO HD2 H N N 318 PRO HD3 H N N 319 PRO HXT H N N 320 SER N N N N 321 SER CA C N S 322 SER C C N N 323 SER O O N N 324 SER CB C N N 325 SER OG O N N 326 SER OXT O N N 327 SER H H N N 328 SER H2 H N N 329 SER HA H N N 330 SER HB2 H N N 331 SER HB3 H N N 332 SER HG H N N 333 SER HXT H N N 334 THR N N N N 335 THR CA C N S 336 THR C C N N 337 THR O O N N 338 THR CB C N R 339 THR OG1 O N N 340 THR CG2 C N N 341 THR OXT O N N 342 THR H H N N 343 THR H2 H N N 344 THR HA H N N 345 THR HB H N N 346 THR HG1 H N N 347 THR HG21 H N N 348 THR HG22 H N N 349 THR HG23 H N N 350 THR HXT H N N 351 TRP N N N N 352 TRP CA C N S 353 TRP C C N N 354 TRP O O N N 355 TRP CB C N N 356 TRP CG C Y N 357 TRP CD1 C Y N 358 TRP CD2 C Y N 359 TRP NE1 N Y N 360 TRP CE2 C Y N 361 TRP CE3 C Y N 362 TRP CZ2 C Y N 363 TRP CZ3 C Y N 364 TRP CH2 C Y N 365 TRP OXT O N N 366 TRP H H N N 367 TRP H2 H N N 368 TRP HA H N N 369 TRP HB2 H N N 370 TRP HB3 H N N 371 TRP HD1 H N N 372 TRP HE1 H N N 373 TRP HE3 H N N 374 TRP HZ2 H N N 375 TRP HZ3 H N N 376 TRP HH2 H N N 377 TRP HXT H N N 378 TYR N N N N 379 TYR CA C N S 380 TYR C C N N 381 TYR O O N N 382 TYR CB C N N 383 TYR CG C Y N 384 TYR CD1 C Y N 385 TYR CD2 C Y N 386 TYR CE1 C Y N 387 TYR CE2 C Y N 388 TYR CZ C Y N 389 TYR OH O N N 390 TYR OXT O N N 391 TYR H H N N 392 TYR H2 H N N 393 TYR HA H N N 394 TYR HB2 H N N 395 TYR HB3 H N N 396 TYR HD1 H N N 397 TYR HD2 H N N 398 TYR HE1 H N N 399 TYR HE2 H N N 400 TYR HH H N N 401 TYR HXT H N N 402 VAL N N N N 403 VAL CA C N S 404 VAL C C N N 405 VAL O O N N 406 VAL CB C N N 407 VAL CG1 C N N 408 VAL CG2 C N N 409 VAL OXT O N N 410 VAL H H N N 411 VAL H2 H N N 412 VAL HA H N N 413 VAL HB H N N 414 VAL HG11 H N N 415 VAL HG12 H N N 416 VAL HG13 H N N 417 VAL HG21 H N N 418 VAL HG22 H N N 419 VAL HG23 H N N 420 VAL HXT H N N 421 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 HIS N CA sing N N 116 HIS N H sing N N 117 HIS N H2 sing N N 118 HIS CA C sing N N 119 HIS CA CB sing N N 120 HIS CA HA sing N N 121 HIS C O doub N N 122 HIS C OXT sing N N 123 HIS CB CG sing N N 124 HIS CB HB2 sing N N 125 HIS CB HB3 sing N N 126 HIS CG ND1 sing Y N 127 HIS CG CD2 doub Y N 128 HIS ND1 CE1 doub Y N 129 HIS ND1 HD1 sing N N 130 HIS CD2 NE2 sing Y N 131 HIS CD2 HD2 sing N N 132 HIS CE1 NE2 sing Y N 133 HIS CE1 HE1 sing N N 134 HIS NE2 HE2 sing N N 135 HIS OXT HXT sing N N 136 HOH O H1 sing N N 137 HOH O H2 sing N N 138 ILE N CA sing N N 139 ILE N H sing N N 140 ILE N H2 sing N N 141 ILE CA C sing N N 142 ILE CA CB sing N N 143 ILE CA HA sing N N 144 ILE C O doub N N 145 ILE C OXT sing N N 146 ILE CB CG1 sing N N 147 ILE CB CG2 sing N N 148 ILE CB HB sing N N 149 ILE CG1 CD1 sing N N 150 ILE CG1 HG12 sing N N 151 ILE CG1 HG13 sing N N 152 ILE CG2 HG21 sing N N 153 ILE CG2 HG22 sing N N 154 ILE CG2 HG23 sing N N 155 ILE CD1 HD11 sing N N 156 ILE CD1 HD12 sing N N 157 ILE CD1 HD13 sing N N 158 ILE OXT HXT sing N N 159 LEU N CA sing N N 160 LEU N H sing N N 161 LEU N H2 sing N N 162 LEU CA C sing N N 163 LEU CA CB sing N N 164 LEU CA HA sing N N 165 LEU C O doub N N 166 LEU C OXT sing N N 167 LEU CB CG sing N N 168 LEU CB HB2 sing N N 169 LEU CB HB3 sing N N 170 LEU CG CD1 sing N N 171 LEU CG CD2 sing N N 172 LEU CG HG sing N N 173 LEU CD1 HD11 sing N N 174 LEU CD1 HD12 sing N N 175 LEU CD1 HD13 sing N N 176 LEU CD2 HD21 sing N N 177 LEU CD2 HD22 sing N N 178 LEU CD2 HD23 sing N N 179 LEU OXT HXT sing N N 180 LYS N CA sing N N 181 LYS N H sing N N 182 LYS N H2 sing N N 183 LYS CA C sing N N 184 LYS CA CB sing N N 185 LYS CA HA sing N N 186 LYS C O doub N N 187 LYS C OXT sing N N 188 LYS CB CG sing N N 189 LYS CB HB2 sing N N 190 LYS CB HB3 sing N N 191 LYS CG CD sing N N 192 LYS CG HG2 sing N N 193 LYS CG HG3 sing N N 194 LYS CD CE sing N N 195 LYS CD HD2 sing N N 196 LYS CD HD3 sing N N 197 LYS CE NZ sing N N 198 LYS CE HE2 sing N N 199 LYS CE HE3 sing N N 200 LYS NZ HZ1 sing N N 201 LYS NZ HZ2 sing N N 202 LYS NZ HZ3 sing N N 203 LYS OXT HXT sing N N 204 MET N CA sing N N 205 MET N H sing N N 206 MET N H2 sing N N 207 MET CA C sing N N 208 MET CA CB sing N N 209 MET CA HA sing N N 210 MET C O doub N N 211 MET C OXT sing N N 212 MET CB CG sing N N 213 MET CB HB2 sing N N 214 MET CB HB3 sing N N 215 MET CG SD sing N N 216 MET CG HG2 sing N N 217 MET CG HG3 sing N N 218 MET SD CE sing N N 219 MET CE HE1 sing N N 220 MET CE HE2 sing N N 221 MET CE HE3 sing N N 222 MET OXT HXT sing N N 223 NAG C1 C2 sing N N 224 NAG C1 O1 sing N N 225 NAG C1 O5 sing N N 226 NAG C1 H1 sing N N 227 NAG C2 C3 sing N N 228 NAG C2 N2 sing N N 229 NAG C2 H2 sing N N 230 NAG C3 C4 sing N N 231 NAG C3 O3 sing N N 232 NAG C3 H3 sing N N 233 NAG C4 C5 sing N N 234 NAG C4 O4 sing N N 235 NAG C4 H4 sing N N 236 NAG C5 C6 sing N N 237 NAG C5 O5 sing N N 238 NAG C5 H5 sing N N 239 NAG C6 O6 sing N N 240 NAG C6 H61 sing N N 241 NAG C6 H62 sing N N 242 NAG C7 C8 sing N N 243 NAG C7 N2 sing N N 244 NAG C7 O7 doub N N 245 NAG C8 H81 sing N N 246 NAG C8 H82 sing N N 247 NAG C8 H83 sing N N 248 NAG N2 HN2 sing N N 249 NAG O1 HO1 sing N N 250 NAG O3 HO3 sing N N 251 NAG O4 HO4 sing N N 252 NAG O6 HO6 sing N N 253 NCA N1 C2 doub Y N 254 NCA N1 C6 sing Y N 255 NCA C2 C3 sing Y N 256 NCA C2 H2 sing N N 257 NCA C3 C4 doub Y N 258 NCA C3 C7 sing N N 259 NCA C4 C5 sing Y N 260 NCA C4 H4 sing N N 261 NCA C5 C6 doub Y N 262 NCA C5 H5 sing N N 263 NCA C6 H6 sing N N 264 NCA C7 O7 doub N N 265 NCA C7 N7 sing N N 266 NCA N7 HN71 sing N N 267 NCA N7 HN72 sing N N 268 PHE N CA sing N N 269 PHE N H sing N N 270 PHE N H2 sing N N 271 PHE CA C sing N N 272 PHE CA CB sing N N 273 PHE CA HA sing N N 274 PHE C O doub N N 275 PHE C OXT sing N N 276 PHE CB CG sing N N 277 PHE CB HB2 sing N N 278 PHE CB HB3 sing N N 279 PHE CG CD1 doub Y N 280 PHE CG CD2 sing Y N 281 PHE CD1 CE1 sing Y N 282 PHE CD1 HD1 sing N N 283 PHE CD2 CE2 doub Y N 284 PHE CD2 HD2 sing N N 285 PHE CE1 CZ doub Y N 286 PHE CE1 HE1 sing N N 287 PHE CE2 CZ sing Y N 288 PHE CE2 HE2 sing N N 289 PHE CZ HZ sing N N 290 PHE OXT HXT sing N N 291 PRO N CA sing N N 292 PRO N CD sing N N 293 PRO N H sing N N 294 PRO CA C sing N N 295 PRO CA CB sing N N 296 PRO CA HA sing N N 297 PRO C O doub N N 298 PRO C OXT sing N N 299 PRO CB CG sing N N 300 PRO CB HB2 sing N N 301 PRO CB HB3 sing N N 302 PRO CG CD sing N N 303 PRO CG HG2 sing N N 304 PRO CG HG3 sing N N 305 PRO CD HD2 sing N N 306 PRO CD HD3 sing N N 307 PRO OXT HXT sing N N 308 SER N CA sing N N 309 SER N H sing N N 310 SER N H2 sing N N 311 SER CA C sing N N 312 SER CA CB sing N N 313 SER CA HA sing N N 314 SER C O doub N N 315 SER C OXT sing N N 316 SER CB OG sing N N 317 SER CB HB2 sing N N 318 SER CB HB3 sing N N 319 SER OG HG sing N N 320 SER OXT HXT sing N N 321 THR N CA sing N N 322 THR N H sing N N 323 THR N H2 sing N N 324 THR CA C sing N N 325 THR CA CB sing N N 326 THR CA HA sing N N 327 THR C O doub N N 328 THR C OXT sing N N 329 THR CB OG1 sing N N 330 THR CB CG2 sing N N 331 THR CB HB sing N N 332 THR OG1 HG1 sing N N 333 THR CG2 HG21 sing N N 334 THR CG2 HG22 sing N N 335 THR CG2 HG23 sing N N 336 THR OXT HXT sing N N 337 TRP N CA sing N N 338 TRP N H sing N N 339 TRP N H2 sing N N 340 TRP CA C sing N N 341 TRP CA CB sing N N 342 TRP CA HA sing N N 343 TRP C O doub N N 344 TRP C OXT sing N N 345 TRP CB CG sing N N 346 TRP CB HB2 sing N N 347 TRP CB HB3 sing N N 348 TRP CG CD1 doub Y N 349 TRP CG CD2 sing Y N 350 TRP CD1 NE1 sing Y N 351 TRP CD1 HD1 sing N N 352 TRP CD2 CE2 doub Y N 353 TRP CD2 CE3 sing Y N 354 TRP NE1 CE2 sing Y N 355 TRP NE1 HE1 sing N N 356 TRP CE2 CZ2 sing Y N 357 TRP CE3 CZ3 doub Y N 358 TRP CE3 HE3 sing N N 359 TRP CZ2 CH2 doub Y N 360 TRP CZ2 HZ2 sing N N 361 TRP CZ3 CH2 sing Y N 362 TRP CZ3 HZ3 sing N N 363 TRP CH2 HH2 sing N N 364 TRP OXT HXT sing N N 365 TYR N CA sing N N 366 TYR N H sing N N 367 TYR N H2 sing N N 368 TYR CA C sing N N 369 TYR CA CB sing N N 370 TYR CA HA sing N N 371 TYR C O doub N N 372 TYR C OXT sing N N 373 TYR CB CG sing N N 374 TYR CB HB2 sing N N 375 TYR CB HB3 sing N N 376 TYR CG CD1 doub Y N 377 TYR CG CD2 sing Y N 378 TYR CD1 CE1 sing Y N 379 TYR CD1 HD1 sing N N 380 TYR CD2 CE2 doub Y N 381 TYR CD2 HD2 sing N N 382 TYR CE1 CZ doub Y N 383 TYR CE1 HE1 sing N N 384 TYR CE2 CZ sing Y N 385 TYR CE2 HE2 sing N N 386 TYR CZ OH sing N N 387 TYR OH HH sing N N 388 TYR OXT HXT sing N N 389 VAL N CA sing N N 390 VAL N H sing N N 391 VAL N H2 sing N N 392 VAL CA C sing N N 393 VAL CA CB sing N N 394 VAL CA HA sing N N 395 VAL C O doub N N 396 VAL C OXT sing N N 397 VAL CB CG1 sing N N 398 VAL CB CG2 sing N N 399 VAL CB HB sing N N 400 VAL CG1 HG11 sing N N 401 VAL CG1 HG12 sing N N 402 VAL CG1 HG13 sing N N 403 VAL CG2 HG21 sing N N 404 VAL CG2 HG22 sing N N 405 VAL CG2 HG23 sing N N 406 VAL OXT HXT sing N N 407 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1MOM _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 4YP2 _atom_sites.fract_transf_matrix[1][1] 0.007686 _atom_sites.fract_transf_matrix[1][2] 0.004438 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.008875 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.026617 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_