HEADER HYDROLASE 13-MAR-15 4YPT TITLE X-RAY STRUCTURAL OF THREE TANDEMLY LINKED DOMAINS OF NSP3 FROM MURINE TITLE 2 HEPATITIS VIRUS AT 2.60 ANGSTROMS RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: REPLICASE POLYPROTEIN 1AB; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PP1AB,ORF1AB POLYPROTEIN; COMPND 5 EC: 3.4.19.12,3.4.22.69,3.4.22.-,2.7.7.48,3.6.4.12,3.6.4.13,2.1.1.-, COMPND 6 3.1.13.-,3.1.-.-; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MURINE CORONAVIRUS (STRAIN A59); SOURCE 3 ORGANISM_COMMON: MHV-A59; SOURCE 4 ORGANISM_TAXID: 11142; SOURCE 5 STRAIN: A59; SOURCE 6 GENE: REP, 1A-1B; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS THUMB-PALM-FINGERS ARCHITECTURE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.CHEN,S.N.SAVINOV,A.M.MIELECH,T.CAO,S.C.BAKER,A.D.MESECAR REVDAT 7 27-DEC-23 4YPT 1 REMARK REVDAT 6 11-DEC-19 4YPT 1 REMARK REVDAT 5 06-SEP-17 4YPT 1 JRNL REMARK REVDAT 4 28-OCT-15 4YPT 1 JRNL REVDAT 3 09-SEP-15 4YPT 1 JRNL REMARK REVDAT 2 02-SEP-15 4YPT 1 DBREF SEQADV SEQRES SITE REVDAT 1 26-AUG-15 4YPT 0 JRNL AUTH Y.CHEN,S.N.SAVINOV,A.M.MIELECH,T.CAO,S.C.BAKER,A.D.MESECAR JRNL TITL X-RAY STRUCTURAL AND FUNCTIONAL STUDIES OF THE THREE JRNL TITL 2 TANDEMLY LINKED DOMAINS OF NON-STRUCTURAL PROTEIN 3 (NSP3) JRNL TITL 3 FROM MURINE HEPATITIS VIRUS REVEAL CONSERVED FUNCTIONS. JRNL REF J.BIOL.CHEM. V. 290 25293 2015 JRNL REFN ESSN 1083-351X JRNL PMID 26296883 JRNL DOI 10.1074/JBC.M115.662130 REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8_1069) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.20 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.370 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 19386 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.173 REMARK 3 R VALUE (WORKING SET) : 0.171 REMARK 3 FREE R VALUE : 0.222 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.150 REMARK 3 FREE R VALUE TEST SET COUNT : 998 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.2062 - 4.9739 1.00 2717 149 0.1850 0.2154 REMARK 3 2 4.9739 - 3.9484 1.00 2645 141 0.1414 0.1934 REMARK 3 3 3.9484 - 3.4495 1.00 2609 150 0.1552 0.2022 REMARK 3 4 3.4495 - 3.1341 1.00 2604 137 0.1748 0.2313 REMARK 3 5 3.1341 - 2.9095 1.00 2631 136 0.1787 0.2375 REMARK 3 6 2.9095 - 2.7380 1.00 2570 149 0.1982 0.2648 REMARK 3 7 2.7380 - 2.6009 0.99 2612 136 0.2098 0.2845 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.260 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.140 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 30.85 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 54.51 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 3058 REMARK 3 ANGLE : 1.138 4125 REMARK 3 CHIRALITY : 0.076 447 REMARK 3 PLANARITY : 0.004 526 REMARK 3 DIHEDRAL : 13.890 1104 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 11:82) REMARK 3 ORIGIN FOR THE GROUP (A): -75.7485 21.6946 -6.1933 REMARK 3 T TENSOR REMARK 3 T11: 0.6562 T22: 0.8827 REMARK 3 T33: 0.6375 T12: -0.1808 REMARK 3 T13: 0.2030 T23: -0.1098 REMARK 3 L TENSOR REMARK 3 L11: 0.1717 L22: 0.2078 REMARK 3 L33: 0.2112 L12: -0.0729 REMARK 3 L13: 0.0176 L23: -0.0356 REMARK 3 S TENSOR REMARK 3 S11: -0.0061 S12: 0.3882 S13: 0.2063 REMARK 3 S21: 0.2059 S22: -0.0205 S23: 0.5545 REMARK 3 S31: -0.2049 S32: 0.3337 S33: 0.0001 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 83:144) REMARK 3 ORIGIN FOR THE GROUP (A): -49.6391 19.1937 5.4787 REMARK 3 T TENSOR REMARK 3 T11: 0.3235 T22: 0.5135 REMARK 3 T33: 0.1117 T12: 0.1337 REMARK 3 T13: -0.1135 T23: -0.0860 REMARK 3 L TENSOR REMARK 3 L11: 0.0521 L22: 0.6162 REMARK 3 L33: 0.8267 L12: -0.1737 REMARK 3 L13: -0.0282 L23: -0.0067 REMARK 3 S TENSOR REMARK 3 S11: -0.0174 S12: 0.1400 S13: 0.0784 REMARK 3 S21: 0.1842 S22: -0.1181 S23: 0.1145 REMARK 3 S31: -0.1038 S32: -0.5729 S33: -0.3423 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 145:259) REMARK 3 ORIGIN FOR THE GROUP (A): -32.8902 20.8193 23.2140 REMARK 3 T TENSOR REMARK 3 T11: 0.2938 T22: 0.1808 REMARK 3 T33: 0.0823 T12: 0.0330 REMARK 3 T13: -0.0421 T23: -0.0434 REMARK 3 L TENSOR REMARK 3 L11: 1.0198 L22: 0.5051 REMARK 3 L33: 0.5285 L12: 0.0005 REMARK 3 L13: 0.5789 L23: 0.1918 REMARK 3 S TENSOR REMARK 3 S11: 0.0095 S12: -0.2207 S13: 0.0926 REMARK 3 S21: -0.0874 S22: 0.0062 S23: 0.1082 REMARK 3 S31: 0.3001 S32: 0.0081 S33: 0.0059 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 260:388) REMARK 3 ORIGIN FOR THE GROUP (A): -15.4156 22.2662 36.7926 REMARK 3 T TENSOR REMARK 3 T11: 0.2762 T22: 0.2143 REMARK 3 T33: 0.1111 T12: 0.1470 REMARK 3 T13: -0.0595 T23: -0.0905 REMARK 3 L TENSOR REMARK 3 L11: 0.7674 L22: 0.6261 REMARK 3 L33: 0.0931 L12: -0.0279 REMARK 3 L13: -0.1973 L23: -0.1537 REMARK 3 S TENSOR REMARK 3 S11: -0.0534 S12: -0.2320 S13: -0.0520 REMARK 3 S21: 0.1340 S22: -0.1639 S23: -0.1279 REMARK 3 S31: -0.0118 S32: -0.0838 S33: -0.0628 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4YPT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-MAR-15. REMARK 100 THE DEPOSITION ID IS D_1000201657. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-JUN-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.8 - 8.3 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-BM-B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.03 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000, DENZO REMARK 200 DATA SCALING SOFTWARE : HKL-2000, SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21716 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 10.20 REMARK 200 R MERGE (I) : 0.05700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 38.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.64 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 10.20 REMARK 200 R MERGE FOR SHELL (I) : 0.74900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 66.87 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.71 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100MM HEPES, 4% PEG400, 2M (NH4)2SO4 REMARK 280 AND 5MM DTT, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 21 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 13555 X+1/2,Y+1/2,Z+1/2 REMARK 290 14555 -X,-Y+1/2,Z REMARK 290 15555 -X+1/2,Y,-Z REMARK 290 16555 X,-Y,-Z+1/2 REMARK 290 17555 Z+1/2,X+1/2,Y+1/2 REMARK 290 18555 Z,-X,-Y+1/2 REMARK 290 19555 -Z,-X+1/2,Y REMARK 290 20555 -Z+1/2,X,-Y REMARK 290 21555 Y+1/2,Z+1/2,X+1/2 REMARK 290 22555 -Y+1/2,Z,-X REMARK 290 23555 Y,-Z,-X+1/2 REMARK 290 24555 -Y,-Z+1/2,X REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 77.78800 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 77.78800 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 77.78800 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 77.78800 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 77.78800 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 77.78800 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 77.78800 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 77.78800 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 77.78800 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 77.78800 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 77.78800 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 77.78800 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 77.78800 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 77.78800 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 77.78800 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 77.78800 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 77.78800 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 77.78800 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 77.78800 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 77.78800 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 77.78800 REMARK 290 SMTRY1 14 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 77.78800 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 15 -1.000000 0.000000 0.000000 77.78800 REMARK 290 SMTRY2 15 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 16 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 16 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 77.78800 REMARK 290 SMTRY1 17 0.000000 0.000000 1.000000 77.78800 REMARK 290 SMTRY2 17 1.000000 0.000000 0.000000 77.78800 REMARK 290 SMTRY3 17 0.000000 1.000000 0.000000 77.78800 REMARK 290 SMTRY1 18 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 18 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 18 0.000000 -1.000000 0.000000 77.78800 REMARK 290 SMTRY1 19 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 19 -1.000000 0.000000 0.000000 77.78800 REMARK 290 SMTRY3 19 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 20 0.000000 0.000000 -1.000000 77.78800 REMARK 290 SMTRY2 20 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 20 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 21 0.000000 1.000000 0.000000 77.78800 REMARK 290 SMTRY2 21 0.000000 0.000000 1.000000 77.78800 REMARK 290 SMTRY3 21 1.000000 0.000000 0.000000 77.78800 REMARK 290 SMTRY1 22 0.000000 -1.000000 0.000000 77.78800 REMARK 290 SMTRY2 22 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 22 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 23 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 23 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 23 -1.000000 0.000000 0.000000 77.78800 REMARK 290 SMTRY1 24 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 24 0.000000 0.000000 -1.000000 77.78800 REMARK 290 SMTRY3 24 1.000000 0.000000 0.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10500 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 50990 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -35.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 77.78800 REMARK 350 BIOMT3 2 0.000000 -1.000000 0.000000 77.78800 REMARK 350 BIOMT1 3 0.000000 1.000000 0.000000 -77.78800 REMARK 350 BIOMT2 3 0.000000 0.000000 -1.000000 77.78800 REMARK 350 BIOMT3 3 -1.000000 0.000000 0.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 1525 REMARK 465 VAL A 1526 REMARK 465 GLU A 1527 REMARK 465 ALA A 1528 REMARK 465 LEU A 1529 REMARK 465 ARG A 1530 REMARK 465 HIS A 1531 REMARK 465 ASP A 1532 REMARK 465 LYS A 1911 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A1548 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU A 1743 O HOH A 2101 1.99 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 2109 O HOH A 2163 16555 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A1549 80.82 -163.44 REMARK 500 PRO A1551 175.18 -58.12 REMARK 500 ASP A1553 0.24 -66.97 REMARK 500 TRP A1554 -160.74 -103.08 REMARK 500 ARG A1555 126.55 -178.71 REMARK 500 VAL A1557 -62.53 -100.22 REMARK 500 ASN A1592 -107.21 55.62 REMARK 500 TYR A1664 5.92 -151.95 REMARK 500 LYS A1697 58.71 -106.28 REMARK 500 SER A1870 -75.05 -51.35 REMARK 500 VAL A1871 -92.40 -71.14 REMARK 500 ALA A1888 -108.28 55.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A2001 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A1794 SG REMARK 620 2 CYS A1796 SG 98.9 REMARK 620 3 CYS A1828 SG 115.3 110.5 REMARK 620 4 CYS A1830 SG 93.2 120.7 115.7 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 2001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 2002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 2003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 2004 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 2005 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 2006 DBREF 4YPT A 1525 1911 UNP P0C6X9 R1AB_CVMA5 1525 1911 SEQRES 1 A 387 GLU VAL GLU ALA LEU ARG HIS ASP ILE GLN LEU ASP ASP SEQRES 2 A 387 ASP ALA ARG VAL PHE VAL GLN ALA ASN MET ASP CYS LEU SEQRES 3 A 387 PRO THR ASP TRP ARG LEU VAL ASN LYS PHE ASP SER VAL SEQRES 4 A 387 ASP GLY VAL ARG THR ILE LYS TYR PHE GLU CYS PRO GLY SEQRES 5 A 387 GLY ILE PHE VAL SER SER GLN GLY LYS LYS PHE GLY TYR SEQRES 6 A 387 VAL GLN ASN GLY SER PHE LYS GLU ALA SER VAL SER GLN SEQRES 7 A 387 ILE ARG ALA LEU LEU ALA ASN LYS VAL ASP VAL LEU CYS SEQRES 8 A 387 THR VAL ASP GLY VAL ASN PHE ARG SER CYS CYS VAL ALA SEQRES 9 A 387 GLU GLY GLU VAL PHE GLY LYS THR LEU GLY SER VAL PHE SEQRES 10 A 387 CYS ASP GLY ILE ASN VAL THR LYS VAL ARG CYS SER ALA SEQRES 11 A 387 ILE TYR LYS GLY LYS VAL PHE PHE GLN TYR SER ASP LEU SEQRES 12 A 387 SER GLU ALA ASP LEU VAL ALA VAL LYS ASP ALA PHE GLY SEQRES 13 A 387 PHE ASP GLU PRO GLN LEU LEU LYS TYR TYR THR MET LEU SEQRES 14 A 387 GLY MET CYS LYS TRP PRO VAL VAL VAL CYS GLY ASN TYR SEQRES 15 A 387 PHE ALA PHE LYS GLN SER ASN ASN ASN OCS TYR ILE ASN SEQRES 16 A 387 VAL ALA CYS LEU MET LEU GLN HIS LEU SER LEU LYS PHE SEQRES 17 A 387 PRO LYS TRP GLN TRP GLN GLU ALA TRP ASN GLU PHE ARG SEQRES 18 A 387 SER GLY LYS PRO LEU ARG PHE VAL SER LEU VAL LEU ALA SEQRES 19 A 387 LYS GLY SER PHE LYS PHE ASN GLU PRO SER ASP SER ILE SEQRES 20 A 387 ASP PHE MET ARG VAL VAL LEU ARG GLU ALA ASP LEU SER SEQRES 21 A 387 GLY ALA THR CYS ASN LEU GLU PHE VAL CYS LYS CYS GLY SEQRES 22 A 387 VAL LYS GLN GLU GLN ARG LYS GLY VAL ASP ALA VAL MET SEQRES 23 A 387 HIS PHE GLY THR LEU ASP LYS GLY ASP LEU VAL ARG GLY SEQRES 24 A 387 TYR ASN ILE ALA CYS THR CYS GLY SER LYS LEU VAL HIS SEQRES 25 A 387 CYS THR GLN PHE ASN VAL PRO PHE LEU ILE CYS SER ASN SEQRES 26 A 387 THR PRO GLU GLY ARG LYS LEU PRO ASP ASP VAL VAL ALA SEQRES 27 A 387 ALA ASN ILE PHE THR GLY GLY SER VAL GLY HIS TYR THR SEQRES 28 A 387 HIS VAL LYS CYS LYS PRO LYS TYR GLN LEU TYR ASP ALA SEQRES 29 A 387 CYS ASN VAL ASN LYS VAL SER GLU ALA LYS GLY ASN PHE SEQRES 30 A 387 THR ASP CYS LEU TYR LEU LYS ASN LEU LYS MODRES 4YPT OCS A 1716 CYS MODIFIED RESIDUE HET OCS A1716 9 HET ZN A2001 1 HET GOL A2002 6 HET GOL A2003 6 HET GOL A2004 6 HET GOL A2005 6 HET GOL A2006 6 HETNAM OCS CYSTEINESULFONIC ACID HETNAM ZN ZINC ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 OCS C3 H7 N O5 S FORMUL 2 ZN ZN 2+ FORMUL 3 GOL 5(C3 H8 O3) FORMUL 8 HOH *77(H2 O) HELIX 1 AA1 ASP A 1536 ASN A 1546 1 11 HELIX 2 AA2 SER A 1599 ALA A 1608 1 10 HELIX 3 AA3 VAL A 1632 GLY A 1638 1 7 HELIX 4 AA4 SER A 1653 LYS A 1657 5 5 HELIX 5 AA5 SER A 1668 PHE A 1679 1 12 HELIX 6 AA6 ASP A 1682 CYS A 1696 1 15 HELIX 7 AA7 ASN A 1715 GLN A 1726 1 12 HELIX 8 AA8 LYS A 1734 SER A 1746 1 13 HELIX 9 AA9 PRO A 1749 GLY A 1760 1 12 HELIX 10 AB1 ASP A 1769 ALA A 1781 1 13 HELIX 11 AB2 GLY A 1805 VAL A 1809 1 5 HELIX 12 AB3 ASP A 1816 GLY A 1823 1 8 SHEET 1 AA1 5 LEU A1556 VAL A1563 0 SHEET 2 AA1 5 VAL A1566 CYS A1574 -1 O TYR A1571 N VAL A1557 SHEET 3 AA1 5 ILE A1578 GLN A1583 -1 O SER A1582 N ILE A1569 SHEET 4 AA1 5 LYS A1586 GLN A1591 -1 O GLY A1588 N SER A1581 SHEET 5 AA1 5 SER A1594 GLU A1597 -1 O LYS A1596 N TYR A1589 SHEET 1 AA2 5 ARG A1623 ALA A1628 0 SHEET 2 AA2 5 LYS A1610 THR A1616 -1 N VAL A1611 O VAL A1627 SHEET 3 AA2 5 VAL A1660 GLN A1663 1 O PHE A1661 N LEU A1614 SHEET 4 AA2 5 VAL A1640 CYS A1642 -1 N PHE A1641 O PHE A1662 SHEET 5 AA2 5 ILE A1645 ASN A1646 -1 O ILE A1645 N CYS A1642 SHEET 1 AA3 2 VAL A1700 CYS A1703 0 SHEET 2 AA3 2 TYR A1706 PHE A1709 -1 O TYR A1706 N CYS A1703 SHEET 1 AA4 4 GLY A1797 LYS A1804 0 SHEET 2 AA4 4 THR A1787 CYS A1794 -1 N LEU A1790 O GLU A1801 SHEET 3 AA4 4 GLY A1831 ASN A1841 -1 O LEU A1834 N VAL A1793 SHEET 4 AA4 4 TYR A1824 CYS A1828 -1 N TYR A1824 O VAL A1835 SHEET 1 AA5 7 MET A1810 PHE A1812 0 SHEET 2 AA5 7 LEU A1845 GLU A1852 1 O SER A1848 N HIS A1811 SHEET 3 AA5 7 PHE A1901 TYR A1906 -1 O CYS A1904 N CYS A1847 SHEET 4 AA5 7 ALA A1862 THR A1867 -1 N ALA A1862 O LEU A1905 SHEET 5 AA5 7 HIS A1873 LYS A1878 -1 O HIS A1873 N THR A1867 SHEET 6 AA5 7 GLN A1884 ASP A1887 -1 O TYR A1886 N HIS A1876 SHEET 7 AA5 7 ASN A1890 LYS A1893 -1 O ASN A1892 N LEU A1885 LINK C ASN A1715 N OCS A1716 1555 1555 1.33 LINK C OCS A1716 N TYR A1717 1555 1555 1.33 LINK SG CYS A1794 ZN ZN A2001 1555 1555 2.43 LINK SG CYS A1796 ZN ZN A2001 1555 1555 2.34 LINK SG CYS A1828 ZN ZN A2001 1555 1555 2.35 LINK SG CYS A1830 ZN ZN A2001 1555 1555 2.27 CISPEP 1 LYS A 1880 PRO A 1881 0 -6.92 CISPEP 2 GLY A 1899 ASN A 1900 0 -0.01 SITE 1 AC1 4 CYS A1794 CYS A1796 CYS A1828 CYS A1830 SITE 1 AC2 5 ASP A1643 GLY A1644 PHE A1662 TYR A1689 SITE 2 AC2 5 TYR A1690 SITE 1 AC3 5 SER A1712 ASN A1713 SER A1870 VAL A1871 SITE 2 AC3 5 HIS A1873 SITE 1 AC4 5 ARG A1803 HIS A1811 PHE A1812 TYR A1824 SITE 2 AC4 5 ILE A1826 SITE 1 AC5 2 GLY A1785 ASN A1841 SITE 1 AC6 3 SER A1761 ARG A1779 HOH A2134 CRYST1 155.576 155.576 155.576 90.00 90.00 90.00 I 21 3 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006428 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006428 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006428 0.00000