HEADER    OXIDOREDUCTASE                          17-MAR-15   4YSP              
TITLE     STRUCTURE OF COPPER NITRITE REDUCTASE FROM GEOBACILLUS                
TITLE    2 THERMODENITRIFICANS - 8.32 MGY                                       
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: NITRITE REDUCTASE;                                         
COMPND   3 CHAIN: A;                                                            
COMPND   4 FRAGMENT: UNP RESIDUES 31-352;                                       
COMPND   5 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: GEOBACILLUS THERMODENITRIFICANS (STRAIN NG80-   
SOURCE   3 2);                                                                  
SOURCE   4 ORGANISM_TAXID: 420246;                                              
SOURCE   5 STRAIN: NG80-2;                                                      
SOURCE   6 GENE: NIRK, GTNG_0650;                                               
SOURCE   7 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   8 EXPRESSION_SYSTEM_TAXID: 562;                                        
SOURCE   9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;                              
SOURCE  10 EXPRESSION_SYSTEM_PLASMID: PET22B                                    
KEYWDS    NITRITE, COPPER, REDUCTASE, OXIDOREDUCTASE                            
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    Y.FUKUDA,K.M.TSE,M.SUZUKI,K.DIEDRICHS,K.HIRATA,T.NAKANE,M.SUGAHARA,   
AUTHOR   2 E.NANGO,K.TONO,Y.JOTI,T.KAMESHIMA,C.SONG,T.HATSUI,M.YABASHI,         
AUTHOR   3 O.NUREKI,H.MATSUMURA,T.INOUE,S.IWATA,E.MIZOHATA                      
REVDAT   4   20-MAR-24 4YSP    1       LINK                                     
REVDAT   3   05-FEB-20 4YSP    1       REMARK                                   
REVDAT   2   25-MAY-16 4YSP    1       JRNL                                     
REVDAT   1   24-FEB-16 4YSP    0                                                
JRNL        AUTH   Y.FUKUDA,K.M.TSE,M.SUZUKI,K.DIEDERICHS,K.HIRATA,T.NAKANE,    
JRNL        AUTH 2 M.SUGAHARA,E.NANGO,K.TONO,Y.JOTI,T.KAMESHIMA,C.SONG,         
JRNL        AUTH 3 T.HATSUI,M.YABASHI,O.NUREKI,H.MATSUMURA,T.INOUE,S.IWATA,     
JRNL        AUTH 4 E.MIZOHATA                                                   
JRNL        TITL   REDOX-COUPLED STRUCTURAL CHANGES IN NITRITE REDUCTASE        
JRNL        TITL 2 REVEALED BY SERIAL FEMTOSECOND AND MICROFOCUS                
JRNL        TITL 3 CRYSTALLOGRAPHY                                              
JRNL        REF    J.BIOCHEM.                    V. 159   527 2016              
JRNL        REFN                   ISSN 0021-924X                               
JRNL        PMID   26769972                                                     
JRNL        DOI    10.1093/JB/MVV133                                            
REMARK   2                                                                      
REMARK   2 RESOLUTION.    1.34 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : REFMAC 5.8.0049                                      
REMARK   3   AUTHORS     : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER,              
REMARK   3               : NICHOLLS,WINN,LONG,VAGIN                             
REMARK   3                                                                      
REMARK   3    REFINEMENT TARGET : MAXIMUM LIKELIHOOD                            
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 1.34                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 20.08                          
REMARK   3   DATA CUTOFF            (SIGMA(F)) : NULL                           
REMARK   3   COMPLETENESS FOR RANGE        (%) : 93.5                           
REMARK   3   NUMBER OF REFLECTIONS             : 83461                          
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   CROSS-VALIDATION METHOD          : THROUGHOUT                      
REMARK   3   FREE R VALUE TEST SET SELECTION  : RANDOM                          
REMARK   3   R VALUE     (WORKING + TEST SET) : 0.126                           
REMARK   3   R VALUE            (WORKING SET) : 0.124                           
REMARK   3   FREE R VALUE                     : 0.150                           
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : 5.100                           
REMARK   3   FREE R VALUE TEST SET COUNT      : 4443                            
REMARK   3                                                                      
REMARK   3  FIT IN THE HIGHEST RESOLUTION BIN.                                  
REMARK   3   TOTAL NUMBER OF BINS USED           : 20                           
REMARK   3   BIN RESOLUTION RANGE HIGH       (A) : 1.34                         
REMARK   3   BIN RESOLUTION RANGE LOW        (A) : 1.37                         
REMARK   3   REFLECTION IN BIN     (WORKING SET) : 6382                         
REMARK   3   BIN COMPLETENESS (WORKING+TEST) (%) : 97.49                        
REMARK   3   BIN R VALUE           (WORKING SET) : 0.1470                       
REMARK   3   BIN FREE R VALUE SET COUNT          : 335                          
REMARK   3   BIN FREE R VALUE                    : 0.1880                       
REMARK   3                                                                      
REMARK   3  NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.                    
REMARK   3   PROTEIN ATOMS            : 2293                                    
REMARK   3   NUCLEIC ACID ATOMS       : 0                                       
REMARK   3   HETEROGEN ATOMS          : 20                                      
REMARK   3   SOLVENT ATOMS            : 285                                     
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : NULL                           
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : 13.57                          
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : -0.03000                                             
REMARK   3    B22 (A**2) : -0.03000                                             
REMARK   3    B33 (A**2) : 0.09000                                              
REMARK   3    B12 (A**2) : -0.01000                                             
REMARK   3    B13 (A**2) : 0.00000                                              
REMARK   3    B23 (A**2) : 0.00000                                              
REMARK   3                                                                      
REMARK   3  ESTIMATED OVERALL COORDINATE ERROR.                                 
REMARK   3   ESU BASED ON R VALUE                            (A): 0.037         
REMARK   3   ESU BASED ON FREE R VALUE                       (A): 0.037         
REMARK   3   ESU BASED ON MAXIMUM LIKELIHOOD                 (A): 0.021         
REMARK   3   ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.121         
REMARK   3                                                                      
REMARK   3 CORRELATION COEFFICIENTS.                                            
REMARK   3   CORRELATION COEFFICIENT FO-FC      : 0.967                         
REMARK   3   CORRELATION COEFFICIENT FO-FC FREE : 0.958                         
REMARK   3                                                                      
REMARK   3  RMS DEVIATIONS FROM IDEAL VALUES        COUNT    RMS    WEIGHT      
REMARK   3   BOND LENGTHS REFINED ATOMS        (A):  2469 ; 0.022 ; 0.019       
REMARK   3   BOND LENGTHS OTHERS               (A):  2335 ; 0.001 ; 0.020       
REMARK   3   BOND ANGLES REFINED ATOMS   (DEGREES):  3378 ; 2.079 ; 1.950       
REMARK   3   BOND ANGLES OTHERS          (DEGREES):  5401 ; 0.926 ; 3.000       
REMARK   3   TORSION ANGLES, PERIOD 1    (DEGREES):   315 ; 8.186 ; 5.000       
REMARK   3   TORSION ANGLES, PERIOD 2    (DEGREES):   107 ;43.581 ;25.421       
REMARK   3   TORSION ANGLES, PERIOD 3    (DEGREES):   403 ;11.736 ;15.000       
REMARK   3   TORSION ANGLES, PERIOD 4    (DEGREES):     4 ; 8.340 ;15.000       
REMARK   3   CHIRAL-CENTER RESTRAINTS       (A**3):   370 ; 0.143 ; 0.200       
REMARK   3   GENERAL PLANES REFINED ATOMS      (A):  2851 ; 0.012 ; 0.021       
REMARK   3   GENERAL PLANES OTHERS             (A):   551 ; 0.001 ; 0.020       
REMARK   3   NON-BONDED CONTACTS REFINED ATOMS (A):  NULL ;  NULL ;  NULL       
REMARK   3   NON-BONDED CONTACTS OTHERS        (A):  NULL ;  NULL ;  NULL       
REMARK   3   NON-BONDED TORSION REFINED ATOMS  (A):  NULL ;  NULL ;  NULL       
REMARK   3   NON-BONDED TORSION OTHERS         (A):  NULL ;  NULL ;  NULL       
REMARK   3   H-BOND (X...Y) REFINED ATOMS      (A):  NULL ;  NULL ;  NULL       
REMARK   3   H-BOND (X...Y) OTHERS             (A):  NULL ;  NULL ;  NULL       
REMARK   3   POTENTIAL METAL-ION REFINED ATOMS (A):  NULL ;  NULL ;  NULL       
REMARK   3   POTENTIAL METAL-ION OTHERS        (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY VDW REFINED ATOMS        (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY VDW OTHERS               (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY H-BOND REFINED ATOMS     (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY H-BOND OTHERS            (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY METAL-ION REFINED ATOMS  (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY METAL-ION OTHERS         (A):  NULL ;  NULL ;  NULL       
REMARK   3                                                                      
REMARK   3  ISOTROPIC THERMAL FACTOR RESTRAINTS.     COUNT   RMS    WEIGHT      
REMARK   3   MAIN-CHAIN BOND REFINED ATOMS  (A**2):  1233 ; 1.512 ; 1.076       
REMARK   3   MAIN-CHAIN BOND OTHER ATOMS    (A**2):  1232 ; 1.459 ; 1.074       
REMARK   3   MAIN-CHAIN ANGLE REFINED ATOMS (A**2):  1557 ; 1.722 ; 1.623       
REMARK   3   MAIN-CHAIN ANGLE OTHER ATOMS   (A**2):  1558 ; 1.724 ; 1.625       
REMARK   3   SIDE-CHAIN BOND REFINED ATOMS  (A**2):  1236 ; 2.762 ; 1.325       
REMARK   3   SIDE-CHAIN BOND OTHER ATOMS    (A**2):  1233 ; 2.659 ; 1.319       
REMARK   3   SIDE-CHAIN ANGLE REFINED ATOMS (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SIDE-CHAIN ANGLE OTHER ATOMS   (A**2):  1816 ; 2.704 ; 1.875       
REMARK   3   LONG RANGE B REFINED ATOMS     (A**2):  2847 ; 2.855 ;10.091       
REMARK   3   LONG RANGE B OTHER ATOMS       (A**2):  2718 ; 2.593 ; 9.430       
REMARK   3                                                                      
REMARK   3 ANISOTROPIC THERMAL FACTOR RESTRAINTS.    COUNT   RMS   WEIGHT       
REMARK   3   RIGID-BOND RESTRAINTS          (A**2):  4804 ; 5.644 ; 3.000       
REMARK   3   SPHERICITY; FREE ATOMS         (A**2):    95 ;21.948 ; 5.000       
REMARK   3   SPHERICITY; BONDED ATOMS       (A**2):  4936 ; 7.256 ; 5.000       
REMARK   3                                                                      
REMARK   3  NCS RESTRAINTS STATISTICS                                           
REMARK   3   NUMBER OF DIFFERENT NCS GROUPS : NULL                              
REMARK   3                                                                      
REMARK   3  TLS DETAILS                                                         
REMARK   3   NUMBER OF TLS GROUPS  : NULL                                       
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELLING.                                             
REMARK   3   METHOD USED : MASK                                                 
REMARK   3   PARAMETERS FOR MASK CALCULATION                                    
REMARK   3   VDW PROBE RADIUS   : 1.20                                          
REMARK   3   ION PROBE RADIUS   : 0.80                                          
REMARK   3   SHRINKAGE RADIUS   : 0.80                                          
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING   
REMARK   3  POSITIONS                                                           
REMARK   4                                                                      
REMARK   4 4YSP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 19-MAR-15.                  
REMARK 100 THE DEPOSITION ID IS D_1000208041.                                   
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : 17-APR-14                          
REMARK 200  TEMPERATURE           (KELVIN) : 100                                
REMARK 200  PH                             : 4.5                                
REMARK 200  NUMBER OF CRYSTALS USED        : NULL                               
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : Y                                  
REMARK 200  RADIATION SOURCE               : SPRING-8                           
REMARK 200  BEAMLINE                       : BL32XU                             
REMARK 200  X-RAY GENERATOR MODEL          : NULL                               
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 0.75000                            
REMARK 200  MONOCHROMATOR                  : NULL                               
REMARK 200  OPTICS                         : NULL                               
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : CCD                                
REMARK 200  DETECTOR MANUFACTURER          : RAYONIX MX225HE                    
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : HKL-2000                           
REMARK 200  DATA SCALING SOFTWARE          : HKL-2000                           
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 87908                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 1.340                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 50.000                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : NULL                               
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 93.6                               
REMARK 200  DATA REDUNDANCY                : 3.100                              
REMARK 200  R MERGE                    (I) : NULL                               
REMARK 200  R SYM                      (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : 11.8000                            
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : NULL                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : NULL                               
REMARK 200  DATA REDUNDANCY IN SHELL       : NULL                               
REMARK 200  R MERGE FOR SHELL          (I) : NULL                               
REMARK 200  R SYM FOR SHELL            (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR SHELL         : NULL                               
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL                         
REMARK 200 SOFTWARE USED: MOLREP                                                
REMARK 200 STARTING MODEL: NULL                                                 
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 59.16                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.01                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M SODIUM ACETATE, 5.5%(W/V) PEG       
REMARK 280  4000, 0.075M CUSO4, PH 4.5, VAPOR DIFFUSION, HANGING DROP,          
REMARK 280  TEMPERATURE 293K                                                    
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3                              
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -Y,X-Y,Z                                                
REMARK 290       3555   -X+Y,-X,Z                                               
REMARK 290       4555   X+2/3,Y+1/3,Z+1/3                                       
REMARK 290       5555   -Y+2/3,X-Y+1/3,Z+1/3                                    
REMARK 290       6555   -X+Y+2/3,-X+1/3,Z+1/3                                   
REMARK 290       7555   X+1/3,Y+2/3,Z+2/3                                       
REMARK 290       8555   -Y+1/3,X-Y+2/3,Z+2/3                                    
REMARK 290       9555   -X+Y+1/3,-X+2/3,Z+2/3                                   
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -0.500000 -0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   2  0.866025 -0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   2  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   3 -0.500000  0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   3 -0.866025 -0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   3  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   4  1.000000  0.000000  0.000000       57.44800            
REMARK 290   SMTRY2   4  0.000000  1.000000  0.000000       33.16762            
REMARK 290   SMTRY3   4  0.000000  0.000000  1.000000       28.07767            
REMARK 290   SMTRY1   5 -0.500000 -0.866025  0.000000       57.44800            
REMARK 290   SMTRY2   5  0.866025 -0.500000  0.000000       33.16762            
REMARK 290   SMTRY3   5  0.000000  0.000000  1.000000       28.07767            
REMARK 290   SMTRY1   6 -0.500000  0.866025  0.000000       57.44800            
REMARK 290   SMTRY2   6 -0.866025 -0.500000  0.000000       33.16762            
REMARK 290   SMTRY3   6  0.000000  0.000000  1.000000       28.07767            
REMARK 290   SMTRY1   7  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   7  0.000000  1.000000  0.000000       66.33524            
REMARK 290   SMTRY3   7  0.000000  0.000000  1.000000       56.15533            
REMARK 290   SMTRY1   8 -0.500000 -0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   8  0.866025 -0.500000  0.000000       66.33524            
REMARK 290   SMTRY3   8  0.000000  0.000000  1.000000       56.15533            
REMARK 290   SMTRY1   9 -0.500000  0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   9 -0.866025 -0.500000  0.000000       66.33524            
REMARK 290   SMTRY3   9  0.000000  0.000000  1.000000       56.15533            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC                          
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC                   
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 TOTAL BURIED SURFACE AREA: 12110 ANGSTROM**2                         
REMARK 350 SURFACE AREA OF THE COMPLEX: 28360 ANGSTROM**2                       
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -257.0 KCAL/MOL                       
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 350   BIOMT1   2 -0.500000 -0.866025  0.000000        0.00000            
REMARK 350   BIOMT2   2  0.866025 -0.500000  0.000000        0.00000            
REMARK 350   BIOMT3   2  0.000000  0.000000  1.000000        0.00000            
REMARK 350   BIOMT1   3 -0.500000  0.866025  0.000000        0.00000            
REMARK 350   BIOMT2   3 -0.866025 -0.500000  0.000000        0.00000            
REMARK 350   BIOMT3   3  0.000000  0.000000  1.000000        0.00000            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     MET A     1                                                      
REMARK 465     GLU A     2                                                      
REMARK 465     SER A     3                                                      
REMARK 465     LYS A     4                                                      
REMARK 465     ASN A     5                                                      
REMARK 465     LYS A     6                                                      
REMARK 465     THR A     7                                                      
REMARK 465     ALA A     8                                                      
REMARK 465     ALA A     9                                                      
REMARK 465     THR A    10                                                      
REMARK 465     GLN A    11                                                      
REMARK 465     GLN A    12                                                      
REMARK 465     SER A    13                                                      
REMARK 465     GLU A    14                                                      
REMARK 465     PRO A    15                                                      
REMARK 465     ASN A    16                                                      
REMARK 465     VAL A    17                                                      
REMARK 465     GLY A   313                                                      
REMARK 465     GLU A   314                                                      
REMARK 465     ASP A   315                                                      
REMARK 465     ASP A   316                                                      
REMARK 465     GLY A   317                                                      
REMARK 465     THR A   318                                                      
REMARK 465     GLU A   319                                                      
REMARK 465     THR A   320                                                      
REMARK 465     SER A   321                                                      
REMARK 465     GLY A   322                                                      
REMARK 465     HIS A   323                                                      
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES                                       
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)              
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999                        
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996                     
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   ATM2   ATM3                                     
REMARK 500    ARG A 168   NE  -  CZ  -  NH1 ANGL. DEV. =  -3.7 DEGREES          
REMARK 500    ARG A 168   NE  -  CZ  -  NH2 ANGL. DEV. =   3.5 DEGREES          
REMARK 500    PHE A 186   CB  -  CG  -  CD1 ANGL. DEV. =   4.4 DEGREES          
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    PRO A  70      163.43    -47.92                                   
REMARK 500    PHE A 213      -30.95   -134.75                                   
REMARK 500    SER A 242       77.95   -112.33                                   
REMARK 500    ASP A 256       12.77     59.24                                   
REMARK 500    ASN A 261       56.98    -94.22                                   
REMARK 500    SER A 274       -1.93     82.91                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS                                         
REMARK 500                                                                      
REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH          
REMARK 500 CIS AND TRANS CONFORMATION.  CIS BONDS, IF ANY, ARE LISTED           
REMARK 500 ON CISPEP RECORDS.  TRANS IS DEFINED AS 180 +/- 30 AND               
REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES.                                  
REMARK 500                                 MODEL     OMEGA                      
REMARK 500 VAL A  292     THR A  293                  147.53                    
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 525                                                                      
REMARK 525 SOLVENT                                                              
REMARK 525                                                                      
REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT                    
REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST                  
REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT                 
REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE                       
REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER;                             
REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE                  
REMARK 525 NUMBER; I=INSERTION CODE):                                           
REMARK 525                                                                      
REMARK 525  M RES CSSEQI                                                        
REMARK 525    HOH A 785        DISTANCE =  6.04 ANGSTROMS                       
REMARK 620                                                                      
REMARK 620 METAL COORDINATION                                                   
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):                             
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              CU A 403  CU                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 HIS A  42   NE2                                                    
REMARK 620 2 GLU A  53   OE2  44.5                                              
REMARK 620 3 HIS A  83   ND1 108.0  81.0                                        
REMARK 620 4 HOH A 567   O   165.6 149.8  81.6                                  
REMARK 620 5 HOH A 725   O    99.9  72.0 102.6  88.1                            
REMARK 620 N                    1     2     3     4                             
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              CU A 401  CU                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 HIS A  95   ND1                                                    
REMARK 620 2 CYS A 135   SG  134.2                                              
REMARK 620 3 HIS A 143   ND1 104.2 106.9                                        
REMARK 620 4 MET A 148   SD   81.5 112.1 116.8                                  
REMARK 620 N                    1     2     3                                   
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              CU A 402  CU                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 HIS A 100   NE2                                                    
REMARK 620 2 HIS A 134   NE2 114.1                                              
REMARK 620 3 HIS A 294   NE2  71.1 103.9                                        
REMARK 620 4 HOH A 724   O   127.5 105.5 130.8                                  
REMARK 620 N                    1     2     3                                   
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              CU A 406  CU                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 HIS A 103   NE2                                                    
REMARK 620 2 THR A 248   OG1 118.5                                              
REMARK 620 3 VAL A 249   N   123.0   4.9                                        
REMARK 620 4 VAL A 249   O   120.3   4.3   3.5                                  
REMARK 620 5 HOH A 520   O   116.5   5.4   7.3   3.9                            
REMARK 620 N                    1     2     3     4                             
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              CU A 407  CU                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 GLU A 239   OE2                                                    
REMARK 620 2 HOH A 540   O    87.2                                              
REMARK 620 3 HOH A 563   O    99.6 114.4                                        
REMARK 620 N                    1     2                                         
REMARK 800                                                                      
REMARK 800 SITE                                                                 
REMARK 800 SITE_IDENTIFIER: AC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue CU A 401                  
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC2                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue CU A 402                  
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC3                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue CU A 403                  
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC4                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue CU A 404                  
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC5                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue CU A 405                  
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC6                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue CU A 406                  
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC7                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue CU A 407                  
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC8                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue MPD A 408                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC9                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 409                 
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 4YSA   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 4YSC   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 4YSD   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 4YSE   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 4YSO   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 4YSQ   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 4YSR   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 4YSS   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 4YST   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 4YSU   RELATED DB: PDB                                   
DBREF  4YSP A    2   323  UNP    A4IL26   A4IL26_GEOTN    31    352             
SEQADV 4YSP MET A    1  UNP  A4IL26              INITIATING METHIONINE          
SEQRES   1 A  323  MET GLU SER LYS ASN LYS THR ALA ALA THR GLN GLN SER          
SEQRES   2 A  323  GLU PRO ASN VAL ILE ALA ALA HIS LYS GLY VAL ASN GLN          
SEQRES   3 A  323  ALA PRO VAL PRO LEU LYS MET GLU ARG VAL GLY PRO HIS          
SEQRES   4 A  323  ASP VAL HIS ILE GLU MET THR ALA GLN ILE THR ASP ILE          
SEQRES   5 A  323  GLU ILE ASP LYS GLY LYS ILE TYR LYS ALA TRP THR PHE          
SEQRES   6 A  323  ASN GLY GLN ALA PRO GLY PRO LEU VAL VAL VAL ASN GLU          
SEQRES   7 A  323  GLY ASP THR ILE HIS PHE THR LEU LYS ASN MET ASP PRO          
SEQRES   8 A  323  VAL VAL PRO HIS SER MET ASP PHE HIS ALA VAL HIS ALA          
SEQRES   9 A  323  SER PRO SER LYS ASP PHE ILE ASP VAL MET PRO ASN LYS          
SEQRES  10 A  323  SER GLY THR PHE THR TYR PRO ALA ASN LYS PRO GLY VAL          
SEQRES  11 A  323  PHE MET TYR HIS CYS GLY THR LYS PRO VAL LEU GLN HIS          
SEQRES  12 A  323  ILE ALA ASN GLY MET HIS GLY VAL ILE ILE VAL LYS PRO          
SEQRES  13 A  323  LYS ASN GLY TYR PRO THR ASP LYS GLU VAL ASP ARG GLU          
SEQRES  14 A  323  TYR VAL LEU ILE GLN ASN GLU TRP TYR LYS TYR ASN ASP          
SEQRES  15 A  323  MET ASN ASP PHE GLN ASN GLY VAL PRO SER TYR VAL VAL          
SEQRES  16 A  323  PHE SER SER LYS ALA LEU LYS PRO GLY ASP PRO ASN THR          
SEQRES  17 A  323  ASN GLY ASP THR PHE THR LEU LYS GLU LYS PRO LEU LEU          
SEQRES  18 A  323  ALA LYS VAL GLY GLU LYS ILE ARG LEU TYR ILE ASN ASN          
SEQRES  19 A  323  VAL GLY PRO ASN GLU VAL SER SER PHE HIS VAL VAL GLY          
SEQRES  20 A  323  THR VAL PHE ASP ASP VAL TYR LEU ASP GLY ASN PRO ASN          
SEQRES  21 A  323  ASN HIS LEU GLN GLY MET GLN THR VAL MET LEU PRO ALA          
SEQRES  22 A  323  SER GLY GLY ALA VAL VAL GLU PHE THR VAL THR ARG PRO          
SEQRES  23 A  323  GLY THR TYR PRO ILE VAL THR HIS GLN PHE ASN HIS ALA          
SEQRES  24 A  323  GLN LYS GLY ALA VAL ALA MET LEU LYS VAL THR GLU THR          
SEQRES  25 A  323  GLY GLU ASP ASP GLY THR GLU THR SER GLY HIS                  
HET     CU  A 401       1                                                       
HET     CU  A 402       1                                                       
HET     CU  A 403       1                                                       
HET     CU  A 404       1                                                       
HET     CU  A 405       1                                                       
HET     CU  A 406       1                                                       
HET     CU  A 407       1                                                       
HET    MPD  A 408       8                                                       
HET    SO4  A 409       5                                                       
HETNAM      CU COPPER (II) ION                                                  
HETNAM     MPD (4S)-2-METHYL-2,4-PENTANEDIOL                                    
HETNAM     SO4 SULFATE ION                                                      
FORMUL   2   CU    7(CU 2+)                                                     
FORMUL   9  MPD    C6 H14 O2                                                    
FORMUL  10  SO4    O4 S 2-                                                      
FORMUL  11  HOH   *285(H2 O)                                                    
HELIX    1 AA1 ILE A   18  LYS A   22  5                                   5    
HELIX    2 AA2 SER A  105  PHE A  110  1                                   6    
HELIX    3 AA3 PRO A  139  ASN A  146  1                                   8    
HELIX    4 AA4 THR A  162  VAL A  166  5                                   5    
HELIX    5 AA5 ASP A  182  GLY A  189  1                                   8    
HELIX    6 AA6 PHE A  213  LYS A  218  1                                   6    
HELIX    7 AA7 GLN A  295  LYS A  301  1                                   7    
SHEET    1 AA1 3 LYS A  32  GLY A  37  0                                        
SHEET    2 AA1 3 ASP A  40  ASP A  55 -1  O  HIS A  42   N  GLU A  34           
SHEET    3 AA1 3 LYS A  58  PHE A  65 -1  O  TYR A  60   N  ILE A  52           
SHEET    1 AA2 4 LYS A  32  GLY A  37  0                                        
SHEET    2 AA2 4 ASP A  40  ASP A  55 -1  O  HIS A  42   N  GLU A  34           
SHEET    3 AA2 4 ASP A  80  ASN A  88  1  O  THR A  85   N  MET A  45           
SHEET    4 AA2 4 SER A 118  ALA A 125 -1  O  PHE A 121   N  PHE A  84           
SHEET    1 AA3 4 VAL A  74  ASN A  77  0                                        
SHEET    2 AA3 4 HIS A 149  LYS A 155  1  O  LYS A 155   N  VAL A  76           
SHEET    3 AA3 4 GLY A 129  HIS A 134 -1  N  GLY A 129   O  VAL A 154           
SHEET    4 AA3 4 ASP A  98  PHE A  99 -1  N  ASP A  98   O  HIS A 134           
SHEET    1 AA4 6 TYR A 193  LYS A 199  0                                        
SHEET    2 AA4 6 ARG A 168  TRP A 177 -1  N  ASN A 175   O  VAL A 195           
SHEET    3 AA4 6 LYS A 227  GLY A 236  1  O  ARG A 229   N  ARG A 168           
SHEET    4 AA4 6 GLY A 276  THR A 282 -1  O  PHE A 281   N  ILE A 228           
SHEET    5 AA4 6 PHE A 250  LEU A 255 -1  N  TYR A 254   O  VAL A 278           
SHEET    6 AA4 6 HIS A 262  MET A 266 -1  O  MET A 266   N  PHE A 250           
SHEET    1 AA5 5 LEU A 220  LYS A 223  0                                        
SHEET    2 AA5 5 VAL A 304  THR A 310  1  O  LYS A 308   N  LEU A 220           
SHEET    3 AA5 5 GLY A 287  THR A 293 -1  N  GLY A 287   O  VAL A 309           
SHEET    4 AA5 5 SER A 241  VAL A 245 -1  N  HIS A 244   O  VAL A 292           
SHEET    5 AA5 5 VAL A 269  LEU A 271 -1  O  LEU A 271   N  SER A 241           
LINK         NE2 HIS A  39                CU    CU A 404     1555   1555  1.94  
LINK         NE2 HIS A  42                CU    CU A 403     1555   1555  2.07  
LINK         OE2 GLU A  53                CU    CU A 403     1555   8554  1.99  
LINK         ND1 HIS A  83                CU    CU A 403     1555   1555  1.98  
LINK         ND1 HIS A  95                CU    CU A 401     1555   1555  2.04  
LINK         NE2 HIS A 100                CU    CU A 402     1555   1555  2.05  
LINK         NE2 HIS A 103                CU    CU A 406     1555   2555  2.37  
LINK         NE2 HIS A 134                CU    CU A 402     1555   1555  2.02  
LINK         SG  CYS A 135                CU    CU A 401     1555   1555  2.23  
LINK         ND1 HIS A 143                CU    CU A 401     1555   1555  2.05  
LINK         SD  MET A 148                CU    CU A 401     1555   1555  2.64  
LINK         OD2 ASP A 167                CU    CU A 405     1555   1555  2.10  
LINK         OE2 GLU A 239                CU    CU A 407     1555   1555  2.31  
LINK         OG1 THR A 248                CU    CU A 406     1555   1555  2.18  
LINK         N   VAL A 249                CU    CU A 406     1555   1555  2.08  
LINK         O   VAL A 249                CU    CU A 406     1555   1555  2.05  
LINK         NE2 HIS A 294                CU    CU A 402     1555   3555  1.99  
LINK        CU    CU A 402                 O   HOH A 724     1555   1555  2.27  
LINK        CU    CU A 403                 O   HOH A 567     1555   6455  2.62  
LINK        CU    CU A 403                 O   HOH A 725     1555   1555  2.42  
LINK        CU    CU A 406                 O   HOH A 520     1555   1555  2.07  
LINK        CU    CU A 407                 O   HOH A 540     1555   1555  2.64  
LINK        CU    CU A 407                 O   HOH A 563     1555   1555  1.88  
CISPEP   1 ALA A   69    PRO A   70          0       -16.83                     
CISPEP   2 LYS A  138    PRO A  139          0       -14.01                     
CISPEP   3 LYS A  138    PRO A  139          0        -2.86                     
CISPEP   4 GLY A  236    PRO A  237          0        19.99                     
SITE     1 AC1  4 HIS A  95  CYS A 135  HIS A 143  MET A 148                    
SITE     1 AC2  4 HIS A 100  HIS A 134  HIS A 294  HOH A 724                    
SITE     1 AC3  5 HIS A  42  GLU A  53  HIS A  83  HOH A 567                    
SITE     2 AC3  5 HOH A 725                                                     
SITE     1 AC4  1 HIS A  39                                                     
SITE     1 AC5  1 ASP A 167                                                     
SITE     1 AC6  4 HIS A 103  THR A 248  VAL A 249  HOH A 520                    
SITE     1 AC7  4 PRO A 191  GLU A 239  HOH A 540  HOH A 563                    
SITE     1 AC8  5 ASP A 163  ASP A 167  ARG A 168  GLU A 169                    
SITE     2 AC8  5 HOH A 546                                                     
SITE     1 AC9  4 TYR A 193  GLN A 300  LYS A 301  HOH A 600                    
CRYST1  114.896  114.896   84.233  90.00  90.00 120.00 H 3           9          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.008704  0.005025  0.000000        0.00000                         
SCALE2      0.000000  0.010050  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.011872        0.00000