HEADER OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR 18-MAR-15 4YTP TITLE CRYSTAL STRUCTURE OF PORCINE HEART MITOCHONDRIAL COMPLEX II BOUND WITH TITLE 2 N-[(4-TERT-BUTYLPHENYL)METHYL]-2-(TRIFLUOROMETHYL)BENZAMIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: SUCCINATE DEHYDROGENASE [UBIQUINONE] FLAVOPROTEIN SUBUNIT, COMPND 3 MITOCHONDRIAL; COMPND 4 CHAIN: A; COMPND 5 SYNONYM: FLAVOPROTEIN SUBUNIT OF COMPLEX II,FP; COMPND 6 EC: 1.3.5.1; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: SUCCINATE DEHYDROGENASE [UBIQUINONE] IRON-SULFUR SUBUNIT, COMPND 9 MITOCHONDRIAL; COMPND 10 CHAIN: B; COMPND 11 SYNONYM: IRON-SULFUR SUBUNIT OF COMPLEX II,IP; COMPND 12 EC: 1.3.5.1; COMPND 13 MOL_ID: 3; COMPND 14 MOLECULE: SUCCINATE DEHYDROGENASE CYTOCHROME B560 SUBUNIT, COMPND 15 MITOCHONDRIAL; COMPND 16 CHAIN: C; COMPND 17 SYNONYM: SUCCINATE-UBIQUINONE OXIDOREDUCTASE CYTOCHROME B LARGE COMPND 18 SUBUNIT,CYBL; COMPND 19 MOL_ID: 4; COMPND 20 MOLECULE: SUCCINATE DEHYDROGENASE [UBIQUINONE] CYTOCHROME B SMALL COMPND 21 SUBUNIT, MITOCHONDRIAL; COMPND 22 CHAIN: D; COMPND 23 SYNONYM: CYBS,CII-4,QPS3,SUCCINATE DEHYDROGENASE COMPLEX SUBUNIT D, COMPND 24 SUCCINATE-UBIQUINONE OXIDOREDUCTASE CYTOCHROME B SMALL SUBUNIT, COMPND 25 SUCCINATE-UBIQUINONE REDUCTASE MEMBRANE ANCHOR SUBUNIT SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SUS SCROFA; SOURCE 3 ORGANISM_COMMON: PIG; SOURCE 4 ORGANISM_TAXID: 9823; SOURCE 5 MOL_ID: 2; SOURCE 6 ORGANISM_SCIENTIFIC: SUS SCROFA; SOURCE 7 ORGANISM_COMMON: PIG; SOURCE 8 ORGANISM_TAXID: 9823; SOURCE 9 MOL_ID: 3; SOURCE 10 ORGANISM_SCIENTIFIC: SUS SCROFA; SOURCE 11 ORGANISM_COMMON: PIG; SOURCE 12 ORGANISM_TAXID: 9823; SOURCE 13 MOL_ID: 4; SOURCE 14 ORGANISM_SCIENTIFIC: SUS SCROFA; SOURCE 15 ORGANISM_COMMON: PIG; SOURCE 16 ORGANISM_TAXID: 9823 KEYWDS OXIDOREDUCTASE, SUCCINATE DEHYDROGENASE, COMPLEX II, INHIBITOR, KEYWDS 2 OXIDOREDUCTASE-OXIDOREDUCTASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR S.HARADA,T.SHIBA,D.SATO,A.YAMAMOTO,M.NAGAHAMA,A.YONE,D.K.INAOKA, AUTHOR 2 K.SAKAMOTO,M.INOUE,T.HONMA,K.KITA REVDAT 3 08-NOV-23 4YTP 1 LINK REVDAT 2 05-FEB-20 4YTP 1 REMARK REVDAT 1 05-AUG-15 4YTP 0 JRNL AUTH D.K.INAOKA,T.SHIBA,D.SATO,E.O.BALOGUN,T.SASAKI,M.NAGAHAMA, JRNL AUTH 2 M.ODA,S.MATSUOKA,J.OHMORI,T.HONMA,M.INOUE,K.KITA,S.HARADA JRNL TITL STRUCTURAL INSIGHTS INTO THE MOLECULAR DESIGN OF FLUTOLANIL JRNL TITL 2 DERIVATIVES TARGETED FOR FUMARATE RESPIRATION OF PARASITE JRNL TITL 3 MITOCHONDRIA JRNL REF INT J MOL SCI V. 16 15287 2015 JRNL REFN ESSN 1422-0067 JRNL PMID 26198225 JRNL DOI 10.3390/IJMS160715287 REMARK 2 REMARK 2 RESOLUTION. 3.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0029 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 80.7 REMARK 3 NUMBER OF REFLECTIONS : 25461 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.210 REMARK 3 R VALUE (WORKING SET) : 0.206 REMARK 3 FREE R VALUE : 0.269 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1352 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.18 REMARK 3 REFLECTION IN BIN (WORKING SET) : 910 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 41.46 REMARK 3 BIN R VALUE (WORKING SET) : 0.2540 REMARK 3 BIN FREE R VALUE SET COUNT : 54 REMARK 3 BIN FREE R VALUE : 0.2900 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 8480 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 139 REMARK 3 SOLVENT ATOMS : 22 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 70.33 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.55000 REMARK 3 B22 (A**2) : -1.16000 REMARK 3 B33 (A**2) : -1.39000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.531 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.340 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 18.921 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.922 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.879 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 8826 ; 0.007 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 8319 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 11987 ; 1.227 ; 1.981 REMARK 3 BOND ANGLES OTHERS (DEGREES): 19128 ; 0.838 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1088 ; 6.330 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 375 ;34.755 ;23.413 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1469 ;18.588 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 59 ;18.389 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1306 ; 0.065 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 9945 ; 0.004 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 2046 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4YTP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 08-APR-15. REMARK 100 THE DEPOSITION ID IS D_1000208092. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-NOV-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-17A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.98000 REMARK 200 MONOCHROMATOR : SI(111) DOUBLE CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 270 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31105 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.100 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.3 REMARK 200 DATA REDUNDANCY : 3.900 REMARK 200 R MERGE (I) : 0.09500 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 11.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.15 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.9 REMARK 200 DATA REDUNDANCY IN SHELL : 4.60 REMARK 200 R MERGE FOR SHELL (I) : 0.51600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 1ZOY REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.03 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.16 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 5MM HEPES-NAOH, 7% PEG 4000, 200MM REMARK 280 SUCROSE, 100MM NACL, 10MM CACL2, 0.5MM EDTA, 3% 1,6-HAXANEDIOL, REMARK 280 0.5% N-DECYL-BETA-D-MALTOSIDE, PH 7.4, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 35.71450 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 147.40850 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 42.00400 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 147.40850 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 35.71450 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 42.00400 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 16760 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 40150 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -144.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -41 REMARK 465 SER A -40 REMARK 465 GLY A -39 REMARK 465 VAL A -38 REMARK 465 ARG A -37 REMARK 465 ALA A -36 REMARK 465 VAL A -35 REMARK 465 SER A -34 REMARK 465 ARG A -33 REMARK 465 LEU A -32 REMARK 465 LEU A -31 REMARK 465 ARG A -30 REMARK 465 ALA A -29 REMARK 465 ARG A -28 REMARK 465 ARG A -27 REMARK 465 LEU A -26 REMARK 465 ALA A -25 REMARK 465 LEU A -24 REMARK 465 THR A -23 REMARK 465 TRP A -22 REMARK 465 ALA A -21 REMARK 465 GLN A -20 REMARK 465 PRO A -19 REMARK 465 ALA A -18 REMARK 465 ALA A -17 REMARK 465 SER A -16 REMARK 465 PRO A -15 REMARK 465 ILE A -14 REMARK 465 GLY A -13 REMARK 465 ALA A -12 REMARK 465 ARG A -11 REMARK 465 SER A -10 REMARK 465 PHE A -9 REMARK 465 HIS A -8 REMARK 465 PHE A -7 REMARK 465 THR A -6 REMARK 465 VAL A -5 REMARK 465 ASP A -4 REMARK 465 GLY A -3 REMARK 465 ASN A -2 REMARK 465 LYS A -1 REMARK 465 ARG A 0 REMARK 465 SER A 1 REMARK 465 SER A 2 REMARK 465 ALA A 3 REMARK 465 LYS A 4 REMARK 465 VAL A 5 REMARK 465 SER A 6 REMARK 465 ASP A 7 REMARK 465 ALA A 8 REMARK 465 ILE A 9 REMARK 465 MET B -27 REMARK 465 ALA B -26 REMARK 465 ALA B -25 REMARK 465 VAL B -24 REMARK 465 VAL B -23 REMARK 465 ALA B -22 REMARK 465 VAL B -21 REMARK 465 SER B -20 REMARK 465 LEU B -19 REMARK 465 LYS B -18 REMARK 465 ARG B -17 REMARK 465 TRP B -16 REMARK 465 PHE B -15 REMARK 465 PRO B -14 REMARK 465 ALA B -13 REMARK 465 THR B -12 REMARK 465 THR B -11 REMARK 465 LEU B -10 REMARK 465 GLY B -9 REMARK 465 GLY B -8 REMARK 465 ALA B -7 REMARK 465 CYS B -6 REMARK 465 LEU B -5 REMARK 465 GLN B -4 REMARK 465 ALA B -3 REMARK 465 CYS B -2 REMARK 465 ARG B -1 REMARK 465 GLY B 0 REMARK 465 ALA B 1 REMARK 465 GLN B 2 REMARK 465 THR B 3 REMARK 465 ALA B 4 REMARK 465 ALA B 5 REMARK 465 ALA B 6 REMARK 465 THR B 7 REMARK 465 ALA B 8 REMARK 465 LYS B 248 REMARK 465 LYS B 249 REMARK 465 ALA B 250 REMARK 465 SER B 251 REMARK 465 ALA B 252 REMARK 465 MET C -25 REMARK 465 ALA C -24 REMARK 465 ALA C -23 REMARK 465 LEU C -22 REMARK 465 LEU C -21 REMARK 465 LEU C -20 REMARK 465 ARG C -19 REMARK 465 HIS C -18 REMARK 465 VAL C -17 REMARK 465 GLY C -16 REMARK 465 ARG C -15 REMARK 465 HIS C -14 REMARK 465 CYS C -13 REMARK 465 LEU C -12 REMARK 465 ARG C -11 REMARK 465 ALA C -10 REMARK 465 HIS C -9 REMARK 465 LEU C -8 REMARK 465 SER C -7 REMARK 465 PRO C -6 REMARK 465 GLN C -5 REMARK 465 LEU C -4 REMARK 465 CYS C -3 REMARK 465 ILE C -2 REMARK 465 ARG C -1 REMARK 465 ASN C 0 REMARK 465 ALA C 1 REMARK 465 VAL C 2 REMARK 465 PRO C 3 REMARK 465 LEU C 4 REMARK 465 GLY C 5 REMARK 465 MET D -22 REMARK 465 ALA D -21 REMARK 465 THR D -20 REMARK 465 LEU D -19 REMARK 465 TRP D -18 REMARK 465 ARG D -17 REMARK 465 LEU D -16 REMARK 465 SER D -15 REMARK 465 VAL D -14 REMARK 465 LEU D -13 REMARK 465 CYS D -12 REMARK 465 GLY D -11 REMARK 465 ALA D -10 REMARK 465 ARG D -9 REMARK 465 GLY D -8 REMARK 465 GLY D -7 REMARK 465 GLY D -6 REMARK 465 ALA D -5 REMARK 465 LEU D -4 REMARK 465 VAL D -3 REMARK 465 LEU D -2 REMARK 465 ARG D -1 REMARK 465 THR D 0 REMARK 465 SER D 1 REMARK 465 VAL D 2 REMARK 465 VAL D 3 REMARK 465 ARG D 4 REMARK 465 PRO D 5 REMARK 465 ALA D 6 REMARK 465 HIS D 7 REMARK 465 VAL D 8 REMARK 465 SER D 9 REMARK 465 ALA D 10 REMARK 465 PHE D 11 REMARK 465 LEU D 12 REMARK 465 GLN D 13 REMARK 465 ASP D 14 REMARK 465 ARG D 15 REMARK 465 HIS D 16 REMARK 465 THR D 17 REMARK 465 PRO D 18 REMARK 465 GLY D 19 REMARK 465 TRP D 20 REMARK 465 CYS D 21 REMARK 465 GLY D 22 REMARK 465 VAL D 23 REMARK 465 GLN D 24 REMARK 465 HIS D 25 REMARK 465 ILE D 26 REMARK 465 HIS D 27 REMARK 465 LEU D 28 REMARK 465 SER D 29 REMARK 465 PRO D 30 REMARK 465 SER D 31 REMARK 465 HIS D 32 REMARK 465 GLN D 33 REMARK 465 ALA D 34 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 VAL D 100 CG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLY A 28 N - CA - C ANGL. DEV. = -16.2 DEGREES REMARK 500 PRO A 567 C - N - CD ANGL. DEV. = -12.9 DEGREES REMARK 500 PRO B 181 C - N - CA ANGL. DEV. = 9.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 11 -0.35 60.95 REMARK 500 ASN A 44 96.24 -63.80 REMARK 500 GLN A 62 -41.70 -130.95 REMARK 500 ALA A 67 119.67 -173.65 REMARK 500 MET A 72 -70.34 -82.12 REMARK 500 GLU A 73 -158.60 -101.10 REMARK 500 LYS A 137 59.74 36.47 REMARK 500 VAL A 150 76.81 -107.25 REMARK 500 ALA A 151 -103.04 49.87 REMARK 500 LEU A 180 -63.91 -99.94 REMARK 500 ASP A 247 29.08 43.14 REMARK 500 ASP A 294 14.27 85.91 REMARK 500 ARG A 313 49.44 -107.24 REMARK 500 LYS A 355 21.04 -144.93 REMARK 500 HIS A 365 -48.33 -147.75 REMARK 500 ASN A 374 171.53 -59.89 REMARK 500 LYS A 438 109.03 -51.51 REMARK 500 ALA A 482 -162.68 -71.13 REMARK 500 CYS A 494 -71.11 -57.57 REMARK 500 ASP A 503 2.94 -67.57 REMARK 500 LYS A 544 71.67 -118.51 REMARK 500 ILE A 568 -110.61 -92.91 REMARK 500 GLN A 569 -116.75 65.18 REMARK 500 GLU A 598 -161.39 -116.47 REMARK 500 ASN A 608 110.94 -164.36 REMARK 500 THR A 614 107.75 -51.33 REMARK 500 SER A 621 134.71 -176.97 REMARK 500 ARG B 10 91.40 -170.23 REMARK 500 LYS B 23 79.26 -155.92 REMARK 500 ILE B 55 -89.26 -86.39 REMARK 500 SER B 64 -74.73 -158.51 REMARK 500 ARG B 66 18.95 42.48 REMARK 500 CYS B 70 -35.47 -132.33 REMARK 500 CYS B 73 30.76 -96.54 REMARK 500 LYS B 109 144.52 -173.88 REMARK 500 ASP B 110 -111.60 39.39 REMARK 500 GLU B 126 64.04 66.12 REMARK 500 LYS B 139 -45.74 -141.25 REMARK 500 ASN B 174 39.65 -146.54 REMARK 500 HIS C 29 -86.46 -145.51 REMARK 500 CYS C 81 57.45 29.87 REMARK 500 LEU C 117 53.60 -105.64 REMARK 500 ASP D 123 -168.65 -162.19 REMARK 500 LYS D 135 -36.72 -38.38 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FES B 301 FE2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 65 SG REMARK 620 2 FES B 301 S1 131.3 REMARK 620 3 FES B 301 S2 93.5 94.4 REMARK 620 4 CYS B 70 SG 91.1 130.4 109.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FES B 301 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 73 SG REMARK 620 2 FES B 301 S1 95.6 REMARK 620 3 FES B 301 S2 119.5 93.6 REMARK 620 4 CYS B 85 SG 114.1 128.2 105.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 B 302 FE2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 158 SG REMARK 620 2 SF4 B 302 S1 145.4 REMARK 620 3 SF4 B 302 S3 120.4 87.2 REMARK 620 4 SF4 B 302 S4 111.2 88.0 88.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 B 302 FE3 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 161 SG REMARK 620 2 SF4 B 302 S1 143.5 REMARK 620 3 SF4 B 302 S2 106.3 85.9 REMARK 620 4 SF4 B 302 S4 126.5 88.1 85.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 B 302 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 164 SG REMARK 620 2 SF4 B 302 S2 112.6 REMARK 620 3 SF4 B 302 S3 133.6 87.1 REMARK 620 4 SF4 B 302 S4 132.4 85.2 88.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 F3S B 303 FE3 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 168 SG REMARK 620 2 F3S B 303 S1 102.5 REMARK 620 3 F3S B 303 S3 112.1 91.6 REMARK 620 4 F3S B 303 S4 117.8 135.0 91.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 F3S B 303 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 215 SG REMARK 620 2 F3S B 303 S1 124.0 REMARK 620 3 F3S B 303 S2 89.0 137.1 REMARK 620 4 F3S B 303 S3 126.3 91.4 88.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 F3S B 303 FE4 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 221 SG REMARK 620 2 F3S B 303 S2 104.9 REMARK 620 3 F3S B 303 S3 112.9 88.3 REMARK 620 4 F3S B 303 S4 103.3 149.5 91.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 B 302 FE4 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 225 SG REMARK 620 2 SF4 B 302 S1 117.5 REMARK 620 3 SF4 B 302 S2 111.0 85.8 REMARK 620 4 SF4 B 302 S3 149.4 87.4 86.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM C 301 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS C 101 NE2 REMARK 620 2 HEM C 301 NA 87.4 REMARK 620 3 HEM C 301 NB 98.9 90.3 REMARK 620 4 HEM C 301 NC 92.1 179.2 90.3 REMARK 620 5 HEM C 301 ND 82.0 89.3 179.0 90.1 REMARK 620 6 HIS D 79 NE2 170.1 88.8 90.3 91.6 88.7 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FAD A 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FES B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SF4 B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue F3S B 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HEM C 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue E23 C 302 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4YSX RELATED DB: PDB REMARK 900 RELATED ID: 4YSY RELATED DB: PDB REMARK 900 RELATED ID: 4YSZ RELATED DB: PDB REMARK 900 RELATED ID: 4YT0 RELATED DB: PDB REMARK 900 RELATED ID: 4YTM RELATED DB: PDB REMARK 900 RELATED ID: 4YTN RELATED DB: PDB REMARK 900 RELATED ID: 4YXD RELATED DB: PDB DBREF 4YTP A -41 622 UNP Q0QF01 SDHA_PIG 1 664 DBREF 4YTP B -27 252 UNP Q007T0 SDHB_PIG 1 280 DBREF 4YTP C -25 143 UNP D0VWV4 C560_PIG 1 169 DBREF 4YTP D -22 136 UNP A5GZW8 DHSD_PIG 1 159 SEQRES 1 A 664 MET SER GLY VAL ARG ALA VAL SER ARG LEU LEU ARG ALA SEQRES 2 A 664 ARG ARG LEU ALA LEU THR TRP ALA GLN PRO ALA ALA SER SEQRES 3 A 664 PRO ILE GLY ALA ARG SER PHE HIS PHE THR VAL ASP GLY SEQRES 4 A 664 ASN LYS ARG SER SER ALA LYS VAL SER ASP ALA ILE SER SEQRES 5 A 664 THR GLN TYR PRO VAL VAL ASP HIS GLU PHE ASP ALA VAL SEQRES 6 A 664 VAL VAL GLY ALA GLY GLY ALA GLY LEU ARG ALA ALA PHE SEQRES 7 A 664 GLY LEU SER GLU ALA GLY PHE ASN THR ALA CYS VAL THR SEQRES 8 A 664 LYS LEU PHE PRO THR ARG SER HIS THR VAL ALA ALA GLN SEQRES 9 A 664 GLY GLY ILE ASN ALA ALA LEU GLY ASN MET GLU GLU ASP SEQRES 10 A 664 ASN TRP ARG TRP HIS PHE TYR ASP THR VAL LYS GLY SER SEQRES 11 A 664 ASP TRP LEU GLY ASP GLN ASP ALA ILE HIS TYR MET THR SEQRES 12 A 664 GLU GLN ALA PRO ALA SER VAL VAL GLU LEU GLU ASN TYR SEQRES 13 A 664 GLY MET PRO PHE SER ARG THR GLU ASP GLY LYS ILE TYR SEQRES 14 A 664 GLN ARG ALA PHE GLY GLY GLN SER LEU LYS PHE GLY LYS SEQRES 15 A 664 GLY GLY GLN ALA HIS ARG CYS CYS CYS VAL ALA ASP ARG SEQRES 16 A 664 THR GLY HIS SER LEU LEU HIS THR LEU TYR GLY ARG SER SEQRES 17 A 664 LEU ARG TYR ASP THR SER TYR PHE VAL GLU TYR PHE ALA SEQRES 18 A 664 LEU ASP LEU LEU MET GLU ASN GLY GLU CYS ARG GLY VAL SEQRES 19 A 664 ILE ALA LEU CYS ILE GLU ASP GLY SER ILE HIS ARG ILE SEQRES 20 A 664 ARG ALA ARG ASN THR VAL VAL ALA THR GLY GLY TYR GLY SEQRES 21 A 664 ARG THR TYR PHE SER CYS THR SER ALA HIS THR SER THR SEQRES 22 A 664 GLY ASP GLY THR ALA MET VAL THR ARG ALA GLY LEU PRO SEQRES 23 A 664 CYS GLN ASP LEU GLU PHE VAL GLN PHE HIS PRO THR GLY SEQRES 24 A 664 ILE TYR GLY ALA GLY CYS LEU ILE THR GLU GLY CYS ARG SEQRES 25 A 664 GLY GLU GLY GLY ILE LEU ILE ASN SER GLN GLY GLU ARG SEQRES 26 A 664 PHE MET GLU ARG TYR ALA PRO VAL ALA LYS ASP LEU ALA SEQRES 27 A 664 SER ARG ASP VAL VAL SER ARG SER MET THR LEU GLU ILE SEQRES 28 A 664 ARG GLU GLY ARG GLY CYS GLY PRO GLU LYS ASP HIS VAL SEQRES 29 A 664 TYR LEU GLN LEU HIS HIS LEU PRO PRO GLU GLN LEU ALA SEQRES 30 A 664 VAL ARG LEU PRO GLY ILE SER GLU THR ALA MET ILE PHE SEQRES 31 A 664 ALA GLY VAL ASP VAL THR LYS GLU PRO ILE PRO VAL LEU SEQRES 32 A 664 PRO THR VAL HIS TYR ASN MET GLY GLY ILE PRO THR ASN SEQRES 33 A 664 TYR LYS GLY GLN VAL LEU ARG HIS VAL ASN GLY GLN ASP SEQRES 34 A 664 GLN VAL VAL PRO GLY LEU TYR ALA CYS GLY GLU ALA ALA SEQRES 35 A 664 CYS ALA SER VAL HIS GLY ALA ASN ARG LEU GLY ALA ASN SEQRES 36 A 664 SER LEU LEU ASP LEU VAL VAL PHE GLY ARG ALA CYS ALA SEQRES 37 A 664 LEU SER ILE ALA GLU SER CYS ARG PRO GLY ASP LYS VAL SEQRES 38 A 664 PRO SER ILE LYS PRO ASN ALA GLY GLU GLU SER VAL MET SEQRES 39 A 664 ASN LEU ASP LYS LEU ARG PHE ALA ASN GLY THR ILE ARG SEQRES 40 A 664 THR SER GLU LEU ARG LEU SER MET GLN LYS SER MET GLN SEQRES 41 A 664 SER HIS ALA ALA VAL PHE ARG VAL GLY SER VAL LEU GLN SEQRES 42 A 664 GLU GLY CYS GLU LYS ILE LEU ARG LEU TYR GLY ASP LEU SEQRES 43 A 664 GLN HIS LEU LYS THR PHE ASP ARG GLY MET VAL TRP ASN SEQRES 44 A 664 THR ASP LEU VAL GLU THR LEU GLU LEU GLN ASN LEU MET SEQRES 45 A 664 LEU CYS ALA LEU GLN THR ILE TYR GLY ALA GLU ALA ARG SEQRES 46 A 664 LYS GLU SER ARG GLY ALA HIS ALA ARG GLU ASP PHE LYS SEQRES 47 A 664 GLU ARG VAL ASP GLU TYR ASP TYR SER LYS PRO ILE GLN SEQRES 48 A 664 GLY GLN GLN LYS LYS PRO PHE GLN GLU HIS TRP ARG LYS SEQRES 49 A 664 HIS THR LEU SER TYR VAL ASP VAL LYS THR GLY LYS VAL SEQRES 50 A 664 SER LEU GLU TYR ARG PRO VAL ILE ASP LYS THR LEU ASN SEQRES 51 A 664 GLU ALA ASP CYS ALA THR VAL PRO PRO ALA ILE ARG SER SEQRES 52 A 664 TYR SEQRES 1 B 280 MET ALA ALA VAL VAL ALA VAL SER LEU LYS ARG TRP PHE SEQRES 2 B 280 PRO ALA THR THR LEU GLY GLY ALA CYS LEU GLN ALA CYS SEQRES 3 B 280 ARG GLY ALA GLN THR ALA ALA ALA THR ALA PRO ARG ILE SEQRES 4 B 280 LYS LYS PHE ALA ILE TYR ARG TRP ASP PRO ASP LYS THR SEQRES 5 B 280 GLY ASP LYS PRO HIS MET GLN THR TYR GLU ILE ASP LEU SEQRES 6 B 280 ASN ASN CYS GLY PRO MET VAL LEU ASP ALA LEU ILE LYS SEQRES 7 B 280 ILE LYS ASN GLU ILE ASP SER THR LEU THR PHE ARG ARG SEQRES 8 B 280 SER CYS ARG GLU GLY ILE CYS GLY SER CYS ALA MET ASN SEQRES 9 B 280 ILE ASN GLY GLY ASN THR LEU ALA CYS THR ARG ARG ILE SEQRES 10 B 280 ASP THR ASN LEU ASP LYS VAL SER LYS ILE TYR PRO LEU SEQRES 11 B 280 PRO HIS MET TYR VAL ILE LYS ASP LEU VAL PRO ASP LEU SEQRES 12 B 280 SER ASN PHE TYR ALA GLN TYR LYS SER ILE GLU PRO TYR SEQRES 13 B 280 LEU LYS LYS LYS ASP GLU SER GLN GLU GLY LYS GLN GLN SEQRES 14 B 280 TYR LEU GLN SER ILE GLU GLU ARG GLU LYS LEU ASP GLY SEQRES 15 B 280 LEU TYR GLU CYS ILE LEU CYS ALA CYS CYS SER THR SER SEQRES 16 B 280 CYS PRO SER TYR TRP TRP ASN GLY ASP LYS TYR LEU GLY SEQRES 17 B 280 PRO ALA VAL LEU MET GLN ALA TYR ARG TRP MET ILE ASP SEQRES 18 B 280 SER ARG ASP ASP PHE THR GLU GLU ARG LEU ALA LYS LEU SEQRES 19 B 280 GLN ASP PRO PHE SER LEU TYR ARG CYS HIS THR ILE MET SEQRES 20 B 280 ASN CYS THR GLY THR CYS PRO LYS GLY LEU ASN PRO GLY SEQRES 21 B 280 LYS ALA ILE ALA GLU ILE LYS LYS MET MET ALA THR TYR SEQRES 22 B 280 LYS GLU LYS LYS ALA SER ALA SEQRES 1 C 169 MET ALA ALA LEU LEU LEU ARG HIS VAL GLY ARG HIS CYS SEQRES 2 C 169 LEU ARG ALA HIS LEU SER PRO GLN LEU CYS ILE ARG ASN SEQRES 3 C 169 ALA VAL PRO LEU GLY THR THR ALA LYS GLU GLU MET GLU SEQRES 4 C 169 ARG PHE TRP ASN LYS ASN LEU GLY SER ASN ARG PRO LEU SEQRES 5 C 169 SER PRO HIS ILE THR ILE TYR ARG TRP SER LEU PRO MET SEQRES 6 C 169 ALA MET SER ILE CYS HIS ARG GLY THR GLY ILE ALA LEU SEQRES 7 C 169 SER ALA GLY VAL SER LEU PHE GLY LEU SER ALA LEU LEU SEQRES 8 C 169 LEU PRO GLY ASN PHE GLU SER HIS LEU GLU LEU VAL LYS SEQRES 9 C 169 SER LEU CYS LEU GLY PRO THR LEU ILE TYR THR ALA LYS SEQRES 10 C 169 PHE GLY ILE VAL PHE PRO LEU MET TYR HIS THR TRP ASN SEQRES 11 C 169 GLY ILE ARG HIS LEU ILE TRP ASP LEU GLY LYS GLY LEU SEQRES 12 C 169 THR ILE PRO GLN LEU THR GLN SER GLY VAL VAL VAL LEU SEQRES 13 C 169 ILE LEU THR VAL LEU SER SER VAL GLY LEU ALA ALA MET SEQRES 1 D 159 MET ALA THR LEU TRP ARG LEU SER VAL LEU CYS GLY ALA SEQRES 2 D 159 ARG GLY GLY GLY ALA LEU VAL LEU ARG THR SER VAL VAL SEQRES 3 D 159 ARG PRO ALA HIS VAL SER ALA PHE LEU GLN ASP ARG HIS SEQRES 4 D 159 THR PRO GLY TRP CYS GLY VAL GLN HIS ILE HIS LEU SER SEQRES 5 D 159 PRO SER HIS GLN ALA SER SER LYS ALA ALA SER LEU HIS SEQRES 6 D 159 TRP THR GLY GLU ARG VAL VAL SER VAL LEU LEU LEU GLY SEQRES 7 D 159 LEU LEU PRO ALA ALA TYR LEU ASN PRO CYS SER ALA MET SEQRES 8 D 159 ASP TYR SER LEU ALA ALA ALA LEU THR LEU HIS GLY HIS SEQRES 9 D 159 TRP GLY ILE GLY GLN VAL VAL THR ASP TYR VAL ARG GLY SEQRES 10 D 159 ASP ALA LEU GLN LYS VAL ALA LYS ALA GLY LEU LEU ALA SEQRES 11 D 159 LEU SER ALA PHE THR PHE ALA GLY LEU CYS TYR PHE ASN SEQRES 12 D 159 TYR HIS ASP VAL GLY ILE CYS LYS ALA VAL ALA MET LEU SEQRES 13 D 159 TRP LYS LEU HET FAD A 701 53 HET FES B 301 4 HET SF4 B 302 8 HET F3S B 303 7 HET HEM C 301 43 HET E23 C 302 24 HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE HETNAM FES FE2/S2 (INORGANIC) CLUSTER HETNAM SF4 IRON/SULFUR CLUSTER HETNAM F3S FE3-S4 CLUSTER HETNAM HEM PROTOPORPHYRIN IX CONTAINING FE HETNAM E23 N-(4-TERT-BUTYLBENZYL)-2-(TRIFLUOROMETHYL)BENZAMIDE HETSYN HEM HEME FORMUL 5 FAD C27 H33 N9 O15 P2 FORMUL 6 FES FE2 S2 FORMUL 7 SF4 FE4 S4 FORMUL 8 F3S FE3 S4 FORMUL 9 HEM C34 H32 FE N4 O4 FORMUL 10 E23 C19 H20 F3 N O FORMUL 11 HOH *22(H2 O) HELIX 1 AA1 GLY A 28 ALA A 41 1 14 HELIX 2 AA2 PHE A 52 SER A 56 5 5 HELIX 3 AA3 HIS A 57 ALA A 61 5 5 HELIX 4 AA4 ASN A 76 SER A 88 1 13 HELIX 5 AA5 ASP A 93 ASN A 113 1 21 HELIX 6 AA6 LYS A 137 LYS A 140 5 4 HELIX 7 AA7 ARG A 153 LEU A 167 1 15 HELIX 8 AA8 TYR A 217 TYR A 221 5 5 HELIX 9 AA9 GLY A 232 ARG A 240 1 9 HELIX 10 AB1 GLU A 267 GLU A 272 1 6 HELIX 11 AB2 PHE A 284 ALA A 289 1 6 HELIX 12 AB3 SER A 297 GLU A 311 1 15 HELIX 13 AB4 PRO A 330 LEU A 338 1 9 HELIX 14 AB5 LEU A 338 GLY A 350 1 13 HELIX 15 AB6 ASN A 413 CYS A 433 1 21 HELIX 16 AB7 GLY A 447 PHE A 459 1 13 HELIX 17 AB8 THR A 466 ALA A 481 1 16 HELIX 18 AB9 VAL A 486 ASP A 503 1 18 HELIX 19 AC1 ASN A 517 ARG A 543 1 27 HELIX 20 AC2 PRO A 575 HIS A 579 5 5 HELIX 21 AC3 ASN B 38 CYS B 40 5 3 HELIX 22 AC4 MET B 43 GLU B 54 1 12 HELIX 23 AC5 LEU B 115 SER B 124 1 10 HELIX 24 AC6 SER B 145 LYS B 151 1 7 HELIX 25 AC7 CYS B 164 SER B 167 5 4 HELIX 26 AC8 CYS B 168 ASN B 174 1 7 HELIX 27 AC9 GLY B 180 ILE B 192 1 13 HELIX 28 AD1 PHE B 198 LYS B 205 1 8 HELIX 29 AD2 MET B 219 CYS B 225 1 7 HELIX 30 AD3 ASN B 230 TYR B 245 1 16 HELIX 31 AD4 THR C 7 GLY C 21 1 15 HELIX 32 AD5 SER C 36 LEU C 66 1 31 HELIX 33 AD6 ASN C 69 SER C 79 1 11 HELIX 34 AD7 GLY C 83 LEU C 113 1 31 HELIX 35 AD8 THR C 118 ALA C 141 1 24 HELIX 36 AD9 LYS D 37 ASN D 63 1 27 HELIX 37 AE1 CYS D 65 VAL D 92 1 28 HELIX 38 AE2 GLY D 94 ASP D 123 1 30 HELIX 39 AE3 GLY D 125 LEU D 136 1 12 SHEET 1 AA1 6 SER A 172 VAL A 175 0 SHEET 2 AA1 6 THR A 45 THR A 49 1 N THR A 45 O SER A 172 SHEET 3 AA1 6 VAL A 15 VAL A 25 1 N ALA A 22 O ALA A 46 SHEET 4 AA1 6 ILE A 202 VAL A 212 1 O VAL A 211 N VAL A 25 SHEET 5 AA1 6 CYS A 189 CYS A 196 -1 N ALA A 194 O HIS A 203 SHEET 6 AA1 6 TYR A 177 MET A 184 -1 N LEU A 183 O ARG A 190 SHEET 1 AA2 6 SER A 172 VAL A 175 0 SHEET 2 AA2 6 THR A 45 THR A 49 1 N THR A 45 O SER A 172 SHEET 3 AA2 6 VAL A 15 VAL A 25 1 N ALA A 22 O ALA A 46 SHEET 4 AA2 6 ILE A 202 VAL A 212 1 O VAL A 211 N VAL A 25 SHEET 5 AA2 6 GLN A 386 ALA A 395 1 O TYR A 394 N THR A 210 SHEET 6 AA2 6 GLN A 378 VAL A 383 -1 N VAL A 383 O GLN A 386 SHEET 1 AA3 3 ILE A 65 ASN A 66 0 SHEET 2 AA3 3 GLN A 143 CYS A 148 -1 O CYS A 148 N ILE A 65 SHEET 3 AA3 3 GLN A 128 SER A 135 -1 N ARG A 129 O CYS A 147 SHEET 1 AA4 3 CYS A 245 GLN A 246 0 SHEET 2 AA4 3 LYS A 582 ASP A 589 -1 O SER A 586 N CYS A 245 SHEET 3 AA4 3 LYS A 594 PRO A 601 -1 O ARG A 600 N HIS A 583 SHEET 1 AA5 2 GLN A 252 HIS A 254 0 SHEET 2 AA5 2 THR A 363 TYR A 366 -1 O TYR A 366 N GLN A 252 SHEET 1 AA6 3 ILE A 275 ILE A 277 0 SHEET 2 AA6 3 VAL A 322 GLN A 325 -1 O GLN A 325 N ILE A 275 SHEET 3 AA6 3 ILE A 358 VAL A 360 -1 O ILE A 358 N LEU A 324 SHEET 1 AA7 2 ILE A 371 PRO A 372 0 SHEET 2 AA7 2 ALA A 400 CYS A 401 1 O CYS A 401 N ILE A 371 SHEET 1 AA8 2 ILE A 464 ARG A 465 0 SHEET 2 AA8 2 LEU A 507 LYS A 508 1 O LYS A 508 N ILE A 464 SHEET 1 AA9 2 PHE A 484 ARG A 485 0 SHEET 2 AA9 2 ALA A 551 ARG A 552 1 O ALA A 551 N ARG A 485 SHEET 1 AB1 5 HIS B 29 ASP B 36 0 SHEET 2 AB1 5 ILE B 11 ARG B 18 -1 N ILE B 16 O GLN B 31 SHEET 3 AB1 5 SER B 97 TYR B 100 1 O SER B 97 N ALA B 15 SHEET 4 AB1 5 ALA B 74 ILE B 77 -1 N ASN B 76 O TYR B 100 SHEET 5 AB1 5 ASN B 81 LEU B 83 -1 O THR B 82 N MET B 75 SHEET 1 AB2 2 VAL B 107 LYS B 109 0 SHEET 2 AB2 2 VAL B 112 PRO B 113 -1 O VAL B 112 N LYS B 109 LINK SG CYS B 65 FE2 FES B 301 1555 1555 2.27 LINK SG CYS B 70 FE2 FES B 301 1555 1555 2.15 LINK SG CYS B 73 FE1 FES B 301 1555 1555 2.34 LINK SG CYS B 85 FE1 FES B 301 1555 1555 2.13 LINK SG CYS B 158 FE2 SF4 B 302 1555 1555 2.16 LINK SG CYS B 161 FE3 SF4 B 302 1555 1555 2.32 LINK SG CYS B 164 FE1 SF4 B 302 1555 1555 2.07 LINK SG CYS B 168 FE3 F3S B 303 1555 1555 1.83 LINK SG CYS B 215 FE1 F3S B 303 1555 1555 2.50 LINK SG CYS B 221 FE4 F3S B 303 1555 1555 2.29 LINK SG CYS B 225 FE4 SF4 B 302 1555 1555 2.45 LINK NE2 HIS C 101 FE HEM C 301 1555 1555 2.29 LINK FE HEM C 301 NE2 HIS D 79 1555 1555 2.30 SITE 1 AC1 33 GLY A 26 ALA A 27 GLY A 28 GLY A 29 SITE 2 AC1 33 ALA A 30 VAL A 48 THR A 49 LYS A 50 SITE 3 AC1 33 LEU A 51 SER A 56 HIS A 57 THR A 58 SITE 4 AC1 33 ALA A 61 GLN A 62 GLY A 63 GLY A 64 SITE 5 AC1 33 TYR A 177 PHE A 178 ALA A 179 THR A 214 SITE 6 AC1 33 GLY A 215 THR A 225 ASP A 233 LEU A 264 SITE 7 AC1 33 HIS A 365 TYR A 366 GLU A 398 ARG A 409 SITE 8 AC1 33 ALA A 412 ASN A 413 SER A 414 LEU A 415 SITE 9 AC1 33 LEU A 418 SITE 1 AC2 6 SER B 64 CYS B 65 CYS B 70 GLY B 71 SITE 2 AC2 6 CYS B 73 CYS B 85 SITE 1 AC3 7 CYS B 158 ILE B 159 CYS B 161 ALA B 162 SITE 2 AC3 7 CYS B 164 CYS B 225 PRO B 226 SITE 1 AC4 8 CYS B 168 TYR B 178 CYS B 215 HIS B 216 SITE 2 AC4 8 ILE B 218 MET B 219 ASN B 220 CYS B 221 SITE 1 AC5 15 HIS C 45 ARG C 46 GLY C 49 LEU C 52 SITE 2 AC5 15 SER C 53 VAL C 56 HIS C 101 THR C 102 SITE 3 AC5 15 HIS C 108 ARG D 47 SER D 50 LEU D 53 SITE 4 AC5 15 LEU D 54 HIS D 79 GLY D 83 SITE 1 AC6 9 PRO B 169 SER B 170 TRP B 173 HIS B 216 SITE 2 AC6 9 ILE C 30 SER C 42 ARG C 46 ASP D 90 SITE 3 AC6 9 TYR D 91 CRYST1 71.429 84.008 294.817 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014000 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011904 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003392 0.00000