data_4YUG # _entry.id 4YUG # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4YUG WWPDB D_1000207923 # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB . 4YUH unspecified PDB . 4YUI unspecified PDB . 4YUJ unspecified PDB . 4YUK unspecified PDB . 4YUL unspecified PDB . 4YUM unspecified PDB . 4YUN unspecified PDB . 4YUO unspecified PDB . 4YUP unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 4YUG _pdbx_database_status.recvd_initial_deposition_date 2015-03-18 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Keedy, D.A.' 1 'Kenner, L.R.' 2 'Warkentin, M.' 3 'Woldeyes, R.A.' 4 'Thompson, M.C.' 5 'Brewster, A.S.' 6 'Van Benschoten, A.H.' 7 'Baxter, E.L.' 8 'Hopkins, J.B.' 9 'Uervirojnangkoorn, M.' 10 'McPhillips, S.E.' 11 'Song, J.' 12 'Mori, R.A.' 13 'Holton, J.M.' 14 'Weis, W.I.' 15 'Brunger, A.T.' 16 'Soltis, M.' 17 'Lemke, H.' 18 'Gonzalez, A.' 19 'Sauter, N.K.' 20 'Cohen, A.E.' 21 'van den Bedem, H.' 22 'Thorne, R.E.' 23 'Fraser, J.S.' 24 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Elife _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2050-084X _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 4 _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Mapping the conformational landscape of a dynamic enzyme by multitemperature and XFEL crystallography.' _citation.year 2015 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.7554/eLife.07574 _citation.pdbx_database_id_PubMed 26422513 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Keedy, D.A.' 1 primary 'Kenner, L.R.' 2 primary 'Warkentin, M.' 3 primary 'Woldeyes, R.A.' 4 primary 'Hopkins, J.B.' 5 primary 'Thompson, M.C.' 6 primary 'Brewster, A.S.' 7 primary 'Van Benschoten, A.H.' 8 primary 'Baxter, E.L.' 9 primary 'Uervirojnangkoorn, M.' 10 primary 'McPhillips, S.E.' 11 primary 'Song, J.' 12 primary 'Alonso-Mori, R.' 13 primary 'Holton, J.M.' 14 primary 'Weis, W.I.' 15 primary 'Brunger, A.T.' 16 primary 'Soltis, S.M.' 17 primary 'Lemke, H.' 18 primary 'Gonzalez, A.' 19 primary 'Sauter, N.K.' 20 primary 'Cohen, A.E.' 21 primary 'van den Bedem, H.' 22 primary 'Thorne, R.E.' 23 primary 'Fraser, J.S.' 24 # _cell.entry_id 4YUG _cell.length_a 42.240 _cell.length_b 51.910 _cell.length_c 88.060 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4YUG _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Peptidyl-prolyl cis-trans isomerase A' 18036.504 1 5.2.1.8 ? ? ? 2 water nat water 18.015 338 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'PPIase A,Cyclophilin A,Cyclosporin A-binding protein,Rotamase A' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYG EKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIAD CGQLE ; _entity_poly.pdbx_seq_one_letter_code_can ;MVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYG EKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIAD CGQLE ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 VAL n 1 3 ASN n 1 4 PRO n 1 5 THR n 1 6 VAL n 1 7 PHE n 1 8 PHE n 1 9 ASP n 1 10 ILE n 1 11 ALA n 1 12 VAL n 1 13 ASP n 1 14 GLY n 1 15 GLU n 1 16 PRO n 1 17 LEU n 1 18 GLY n 1 19 ARG n 1 20 VAL n 1 21 SER n 1 22 PHE n 1 23 GLU n 1 24 LEU n 1 25 PHE n 1 26 ALA n 1 27 ASP n 1 28 LYS n 1 29 VAL n 1 30 PRO n 1 31 LYS n 1 32 THR n 1 33 ALA n 1 34 GLU n 1 35 ASN n 1 36 PHE n 1 37 ARG n 1 38 ALA n 1 39 LEU n 1 40 SER n 1 41 THR n 1 42 GLY n 1 43 GLU n 1 44 LYS n 1 45 GLY n 1 46 PHE n 1 47 GLY n 1 48 TYR n 1 49 LYS n 1 50 GLY n 1 51 SER n 1 52 CYS n 1 53 PHE n 1 54 HIS n 1 55 ARG n 1 56 ILE n 1 57 ILE n 1 58 PRO n 1 59 GLY n 1 60 PHE n 1 61 MET n 1 62 CYS n 1 63 GLN n 1 64 GLY n 1 65 GLY n 1 66 ASP n 1 67 PHE n 1 68 THR n 1 69 ARG n 1 70 HIS n 1 71 ASN n 1 72 GLY n 1 73 THR n 1 74 GLY n 1 75 GLY n 1 76 LYS n 1 77 SER n 1 78 ILE n 1 79 TYR n 1 80 GLY n 1 81 GLU n 1 82 LYS n 1 83 PHE n 1 84 GLU n 1 85 ASP n 1 86 GLU n 1 87 ASN n 1 88 PHE n 1 89 ILE n 1 90 LEU n 1 91 LYS n 1 92 HIS n 1 93 THR n 1 94 GLY n 1 95 PRO n 1 96 GLY n 1 97 ILE n 1 98 LEU n 1 99 SER n 1 100 MET n 1 101 ALA n 1 102 ASN n 1 103 ALA n 1 104 GLY n 1 105 PRO n 1 106 ASN n 1 107 THR n 1 108 ASN n 1 109 GLY n 1 110 SER n 1 111 GLN n 1 112 PHE n 1 113 PHE n 1 114 ILE n 1 115 CYS n 1 116 THR n 1 117 ALA n 1 118 LYS n 1 119 THR n 1 120 GLU n 1 121 TRP n 1 122 LEU n 1 123 ASP n 1 124 GLY n 1 125 LYS n 1 126 HIS n 1 127 VAL n 1 128 VAL n 1 129 PHE n 1 130 GLY n 1 131 LYS n 1 132 VAL n 1 133 LYS n 1 134 GLU n 1 135 GLY n 1 136 MET n 1 137 ASN n 1 138 ILE n 1 139 VAL n 1 140 GLU n 1 141 ALA n 1 142 MET n 1 143 GLU n 1 144 ARG n 1 145 PHE n 1 146 GLY n 1 147 SER n 1 148 ARG n 1 149 ASN n 1 150 GLY n 1 151 LYS n 1 152 THR n 1 153 SER n 1 154 LYS n 1 155 LYS n 1 156 ILE n 1 157 THR n 1 158 ILE n 1 159 ALA n 1 160 ASP n 1 161 CYS n 1 162 GLY n 1 163 GLN n 1 164 LEU n 1 165 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 165 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'PPIA, CYPA' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.db_code PPIA_HUMAN _struct_ref.db_name UNP _struct_ref.details ? _struct_ref.entity_id 1 _struct_ref.id 1 _struct_ref.seq_align ? _struct_ref.seq_dif ? _struct_ref.pdbx_db_accession P62937 _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ;MVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYG EKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIAD CGQLE ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_align_end ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4YUG _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 165 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P62937 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 165 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 165 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 4YUG _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.68 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 54.04 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;Crystals were grown by mixing equal volumes of well solution (100 mM HEPES pH 7.5, 23% PEG 3350, 5 mM TCEP) and protein (60 mg/mL in 20 mM HEPES pH 7.5, 100 mM NaCl, 0.5 mM TCEP) in the hanging-drop format. ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 210' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2012-03-04 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9767 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'CHESS BEAMLINE A1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9767 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline A1 _diffrn_source.pdbx_synchrotron_site CHESS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 4YUG _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.48 _reflns.d_resolution_low 38.085 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 32657 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 4.9 _reflns.pdbx_Rmerge_I_obs 0.068 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 14.07 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.48 _reflns_shell.d_res_low 1.53 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 1.57 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all 100 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.994 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 4.9 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4YUG _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 32627 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.36 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 38.085 _refine.ls_d_res_high 1.480 _refine.ls_percent_reflns_obs 98.77 _refine.ls_R_factor_obs 0.1343 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1327 _refine.ls_R_factor_R_free 0.1833 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 3.15 _refine.ls_number_reflns_R_free 1028 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.14 _refine.pdbx_overall_phase_error 18.07 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1266 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 338 _refine_hist.number_atoms_total 1604 _refine_hist.d_res_high 1.480 _refine_hist.d_res_low 38.085 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.008 ? ? 2025 'X-RAY DIFFRACTION' ? f_angle_d 1.163 ? ? 2801 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 13.088 ? ? 774 'X-RAY DIFFRACTION' ? f_chiral_restr 0.079 ? ? 285 'X-RAY DIFFRACTION' ? f_plane_restr 0.005 ? ? 394 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all 'X-RAY DIFFRACTION' . 1.4800 1.5580 4507 0.2035 100.00 0.2684 . . 147 . . 'X-RAY DIFFRACTION' . 1.5580 1.6556 4482 0.1604 100.00 0.2231 . . 143 . . 'X-RAY DIFFRACTION' . 1.6556 1.7835 4509 0.1329 100.00 0.1898 . . 147 . . 'X-RAY DIFFRACTION' . 1.7835 1.9630 4477 0.1169 99.00 0.1826 . . 145 . . 'X-RAY DIFFRACTION' . 1.9630 2.2470 4504 0.1139 99.00 0.1533 . . 146 . . 'X-RAY DIFFRACTION' . 2.2470 2.8308 4520 0.1369 98.00 0.1712 . . 147 . . 'X-RAY DIFFRACTION' . 2.8308 38.0978 4600 0.1301 96.00 0.1838 . . 153 . . # _struct.entry_id 4YUG _struct.title 'Multiconformer synchrotron model of CypA at 100 K' _struct.pdbx_descriptor 'Cyclophilin A' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 4YUG _struct_keywords.text 'Cyclophilin, Isomerase' _struct_keywords.pdbx_keywords ISOMERASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 VAL A 29 ? GLY A 42 ? VAL A 29 GLY A 42 1 ? 14 HELX_P HELX_P2 AA2 THR A 119 ? ASP A 123 ? THR A 119 ASP A 123 5 ? 5 HELX_P HELX_P3 AA3 GLY A 135 ? ARG A 144 ? GLY A 135 ARG A 144 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 8 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA1 5 6 ? anti-parallel AA1 6 7 ? anti-parallel AA1 7 8 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ARG A 55 ? ILE A 57 ? ARG A 55 ILE A 57 AA1 2 MET A 61 ? GLY A 64 ? MET A 61 GLY A 64 AA1 3 PHE A 112 ? CYS A 115 ? PHE A 112 CYS A 115 AA1 4 ILE A 97 ? MET A 100 ? ILE A 97 MET A 100 AA1 5 VAL A 128 ? GLU A 134 ? VAL A 128 GLU A 134 AA1 6 GLU A 15 ? LEU A 24 ? GLU A 15 LEU A 24 AA1 7 THR A 5 ? VAL A 12 ? THR A 5 VAL A 12 AA1 8 ILE A 156 ? LEU A 164 ? ILE A 156 LEU A 164 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ARG A 55 ? N ARG A 55 O GLN A 63 ? O GLN A 63 AA1 2 3 N CYS A 62 ? N CYS A 62 O ILE A 114 ? O ILE A 114 AA1 3 4 O CYS A 115 ? O CYS A 115 N ILE A 97 ? N ILE A 97 AA1 4 5 N LEU A 98 ? N LEU A 98 O GLY A 130 ? O GLY A 130 AA1 5 6 O LYS A 133 ? O LYS A 133 N SER A 21 ? N SER A 21 AA1 6 7 O GLY A 18 ? O GLY A 18 N ILE A 10 ? N ILE A 10 AA1 7 8 N ASP A 9 ? N ASP A 9 O ASP A 160 ? O ASP A 160 # _atom_sites.entry_id 4YUG _atom_sites.fract_transf_matrix[1][1] 0.023674 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.019264 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011356 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 VAL 2 2 2 VAL VAL A . n A 1 3 ASN 3 3 3 ASN ASN A . n A 1 4 PRO 4 4 4 PRO PRO A . n A 1 5 THR 5 5 5 THR THR A . n A 1 6 VAL 6 6 6 VAL VAL A . n A 1 7 PHE 7 7 7 PHE PHE A . n A 1 8 PHE 8 8 8 PHE PHE A . n A 1 9 ASP 9 9 9 ASP ASP A . n A 1 10 ILE 10 10 10 ILE ILE A . n A 1 11 ALA 11 11 11 ALA ALA A . n A 1 12 VAL 12 12 12 VAL VAL A . n A 1 13 ASP 13 13 13 ASP ASP A . n A 1 14 GLY 14 14 14 GLY GLY A . n A 1 15 GLU 15 15 15 GLU GLU A . n A 1 16 PRO 16 16 16 PRO PRO A . n A 1 17 LEU 17 17 17 LEU LEU A . n A 1 18 GLY 18 18 18 GLY GLY A . n A 1 19 ARG 19 19 19 ARG ARG A . n A 1 20 VAL 20 20 20 VAL VAL A . n A 1 21 SER 21 21 21 SER SER A . n A 1 22 PHE 22 22 22 PHE PHE A . n A 1 23 GLU 23 23 23 GLU GLU A . n A 1 24 LEU 24 24 24 LEU LEU A . n A 1 25 PHE 25 25 25 PHE PHE A . n A 1 26 ALA 26 26 26 ALA ALA A . n A 1 27 ASP 27 27 27 ASP ASP A . n A 1 28 LYS 28 28 28 LYS LYS A . n A 1 29 VAL 29 29 29 VAL VAL A . n A 1 30 PRO 30 30 30 PRO PRO A . n A 1 31 LYS 31 31 31 LYS LYS A . n A 1 32 THR 32 32 32 THR THR A . n A 1 33 ALA 33 33 33 ALA ALA A . n A 1 34 GLU 34 34 34 GLU GLU A . n A 1 35 ASN 35 35 35 ASN ASN A . n A 1 36 PHE 36 36 36 PHE PHE A . n A 1 37 ARG 37 37 37 ARG ARG A . n A 1 38 ALA 38 38 38 ALA ALA A . n A 1 39 LEU 39 39 39 LEU LEU A . n A 1 40 SER 40 40 40 SER SER A . n A 1 41 THR 41 41 41 THR THR A . n A 1 42 GLY 42 42 42 GLY GLY A . n A 1 43 GLU 43 43 43 GLU GLU A . n A 1 44 LYS 44 44 44 LYS LYS A . n A 1 45 GLY 45 45 45 GLY GLY A . n A 1 46 PHE 46 46 46 PHE PHE A . n A 1 47 GLY 47 47 47 GLY GLY A . n A 1 48 TYR 48 48 48 TYR TYR A . n A 1 49 LYS 49 49 49 LYS LYS A . n A 1 50 GLY 50 50 50 GLY GLY A . n A 1 51 SER 51 51 51 SER SER A . n A 1 52 CYS 52 52 52 CYS CYS A . n A 1 53 PHE 53 53 53 PHE PHE A . n A 1 54 HIS 54 54 54 HIS HIS A . n A 1 55 ARG 55 55 55 ARG ARG A . n A 1 56 ILE 56 56 56 ILE ILE A . n A 1 57 ILE 57 57 57 ILE ILE A . n A 1 58 PRO 58 58 58 PRO PRO A . n A 1 59 GLY 59 59 59 GLY GLY A . n A 1 60 PHE 60 60 60 PHE PHE A . n A 1 61 MET 61 61 61 MET MET A . n A 1 62 CYS 62 62 62 CYS CYS A . n A 1 63 GLN 63 63 63 GLN GLN A . n A 1 64 GLY 64 64 64 GLY GLY A . n A 1 65 GLY 65 65 65 GLY GLY A . n A 1 66 ASP 66 66 66 ASP ASP A . n A 1 67 PHE 67 67 67 PHE PHE A . n A 1 68 THR 68 68 68 THR THR A . n A 1 69 ARG 69 69 69 ARG ARG A . n A 1 70 HIS 70 70 70 HIS HIS A . n A 1 71 ASN 71 71 71 ASN ASN A . n A 1 72 GLY 72 72 72 GLY GLY A . n A 1 73 THR 73 73 73 THR THR A . n A 1 74 GLY 74 74 74 GLY GLY A . n A 1 75 GLY 75 75 75 GLY GLY A . n A 1 76 LYS 76 76 76 LYS LYS A . n A 1 77 SER 77 77 77 SER SER A . n A 1 78 ILE 78 78 78 ILE ILE A . n A 1 79 TYR 79 79 79 TYR TYR A . n A 1 80 GLY 80 80 80 GLY GLY A . n A 1 81 GLU 81 81 81 GLU GLU A . n A 1 82 LYS 82 82 82 LYS LYS A . n A 1 83 PHE 83 83 83 PHE PHE A . n A 1 84 GLU 84 84 84 GLU GLU A . n A 1 85 ASP 85 85 85 ASP ASP A . n A 1 86 GLU 86 86 86 GLU GLU A . n A 1 87 ASN 87 87 87 ASN ASN A . n A 1 88 PHE 88 88 88 PHE PHE A . n A 1 89 ILE 89 89 89 ILE ILE A . n A 1 90 LEU 90 90 90 LEU LEU A . n A 1 91 LYS 91 91 91 LYS LYS A . n A 1 92 HIS 92 92 92 HIS HIS A . n A 1 93 THR 93 93 93 THR THR A . n A 1 94 GLY 94 94 94 GLY GLY A . n A 1 95 PRO 95 95 95 PRO PRO A . n A 1 96 GLY 96 96 96 GLY GLY A . n A 1 97 ILE 97 97 97 ILE ILE A . n A 1 98 LEU 98 98 98 LEU LEU A . n A 1 99 SER 99 99 99 SER SER A . n A 1 100 MET 100 100 100 MET MET A . n A 1 101 ALA 101 101 101 ALA ALA A . n A 1 102 ASN 102 102 102 ASN ASN A . n A 1 103 ALA 103 103 103 ALA ALA A . n A 1 104 GLY 104 104 104 GLY GLY A . n A 1 105 PRO 105 105 105 PRO PRO A . n A 1 106 ASN 106 106 106 ASN ASN A . n A 1 107 THR 107 107 107 THR THR A . n A 1 108 ASN 108 108 108 ASN ASN A . n A 1 109 GLY 109 109 109 GLY GLY A . n A 1 110 SER 110 110 110 SER SER A . n A 1 111 GLN 111 111 111 GLN GLN A . n A 1 112 PHE 112 112 112 PHE PHE A . n A 1 113 PHE 113 113 113 PHE PHE A . n A 1 114 ILE 114 114 114 ILE ILE A . n A 1 115 CYS 115 115 115 CYS CYS A . n A 1 116 THR 116 116 116 THR THR A . n A 1 117 ALA 117 117 117 ALA ALA A . n A 1 118 LYS 118 118 118 LYS LYS A . n A 1 119 THR 119 119 119 THR THR A . n A 1 120 GLU 120 120 120 GLU GLU A . n A 1 121 TRP 121 121 121 TRP TRP A . n A 1 122 LEU 122 122 122 LEU LEU A . n A 1 123 ASP 123 123 123 ASP ASP A . n A 1 124 GLY 124 124 124 GLY GLY A . n A 1 125 LYS 125 125 125 LYS LYS A . n A 1 126 HIS 126 126 126 HIS HIS A . n A 1 127 VAL 127 127 127 VAL VAL A . n A 1 128 VAL 128 128 128 VAL VAL A . n A 1 129 PHE 129 129 129 PHE PHE A . n A 1 130 GLY 130 130 130 GLY GLY A . n A 1 131 LYS 131 131 131 LYS LYS A . n A 1 132 VAL 132 132 132 VAL VAL A . n A 1 133 LYS 133 133 133 LYS LYS A . n A 1 134 GLU 134 134 134 GLU GLU A . n A 1 135 GLY 135 135 135 GLY GLY A . n A 1 136 MET 136 136 136 MET MET A . n A 1 137 ASN 137 137 137 ASN ASN A . n A 1 138 ILE 138 138 138 ILE ILE A . n A 1 139 VAL 139 139 139 VAL VAL A . n A 1 140 GLU 140 140 140 GLU GLU A . n A 1 141 ALA 141 141 141 ALA ALA A . n A 1 142 MET 142 142 142 MET MET A . n A 1 143 GLU 143 143 143 GLU GLU A . n A 1 144 ARG 144 144 144 ARG ARG A . n A 1 145 PHE 145 145 145 PHE PHE A . n A 1 146 GLY 146 146 146 GLY GLY A . n A 1 147 SER 147 147 147 SER SER A . n A 1 148 ARG 148 148 148 ARG ARG A . n A 1 149 ASN 149 149 149 ASN ASN A . n A 1 150 GLY 150 150 150 GLY GLY A . n A 1 151 LYS 151 151 151 LYS LYS A . n A 1 152 THR 152 152 152 THR THR A . n A 1 153 SER 153 153 153 SER SER A . n A 1 154 LYS 154 154 154 LYS LYS A . n A 1 155 LYS 155 155 155 LYS LYS A . n A 1 156 ILE 156 156 156 ILE ILE A . n A 1 157 THR 157 157 157 THR THR A . n A 1 158 ILE 158 158 158 ILE ILE A . n A 1 159 ALA 159 159 159 ALA ALA A . n A 1 160 ASP 160 160 160 ASP ASP A . n A 1 161 CYS 161 161 161 CYS CYS A . n A 1 162 GLY 162 162 162 GLY GLY A . n A 1 163 GLN 163 163 163 GLN GLN A . n A 1 164 LEU 164 164 164 LEU LEU A . n A 1 165 GLU 165 165 165 GLU GLU A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 201 190 HOH HOH A . B 2 HOH 2 202 244 HOH HOH A . B 2 HOH 3 203 203 HOH HOH A . B 2 HOH 4 204 131 HOH HOH A . B 2 HOH 5 205 227 HOH HOH A . B 2 HOH 6 206 33 HOH HOH A . B 2 HOH 7 207 252 HOH HOH A . B 2 HOH 8 208 66 HOH HOH A . B 2 HOH 9 209 302 HOH HOH A . B 2 HOH 10 210 320 HOH HOH A . B 2 HOH 11 211 241 HOH HOH A . B 2 HOH 12 212 150 HOH HOH A . B 2 HOH 13 213 144 HOH HOH A . B 2 HOH 14 214 69 HOH HOH A . B 2 HOH 15 215 304 HOH HOH A . B 2 HOH 16 216 67 HOH HOH A . B 2 HOH 17 217 38 HOH HOH A . B 2 HOH 18 218 273 HOH HOH A . B 2 HOH 19 219 330 HOH HOH A . B 2 HOH 20 220 47 HOH HOH A . B 2 HOH 21 221 133 HOH HOH A . B 2 HOH 22 222 141 HOH HOH A . B 2 HOH 23 223 308 HOH HOH A . B 2 HOH 24 224 93 HOH HOH A . B 2 HOH 25 225 324 HOH HOH A . B 2 HOH 26 226 217 HOH HOH A . B 2 HOH 27 227 209 HOH HOH A . B 2 HOH 28 228 142 HOH HOH A . B 2 HOH 29 229 57 HOH HOH A . B 2 HOH 30 230 70 HOH HOH A . B 2 HOH 31 231 316 HOH HOH A . B 2 HOH 32 232 63 HOH HOH A . B 2 HOH 33 233 283 HOH HOH A . B 2 HOH 34 234 171 HOH HOH A . B 2 HOH 35 235 89 HOH HOH A . B 2 HOH 36 236 9 HOH HOH A . B 2 HOH 37 237 87 HOH HOH A . B 2 HOH 38 238 22 HOH HOH A . B 2 HOH 39 239 134 HOH HOH A . B 2 HOH 40 240 208 HOH HOH A . B 2 HOH 41 241 51 HOH HOH A . B 2 HOH 42 242 236 HOH HOH A . B 2 HOH 43 243 115 HOH HOH A . B 2 HOH 44 244 136 HOH HOH A . B 2 HOH 45 245 48 HOH HOH A . B 2 HOH 46 246 76 HOH HOH A . B 2 HOH 47 247 117 HOH HOH A . B 2 HOH 48 248 105 HOH HOH A . B 2 HOH 49 249 182 HOH HOH A . B 2 HOH 50 250 41 HOH HOH A . B 2 HOH 51 251 112 HOH HOH A . B 2 HOH 52 252 14 HOH HOH A . B 2 HOH 53 253 53 HOH HOH A . B 2 HOH 54 254 204 HOH HOH A . B 2 HOH 55 255 55 HOH HOH A . B 2 HOH 56 256 130 HOH HOH A . B 2 HOH 57 257 212 HOH HOH A . B 2 HOH 58 258 85 HOH HOH A . B 2 HOH 59 259 269 HOH HOH A . B 2 HOH 60 260 106 HOH HOH A . B 2 HOH 61 261 36 HOH HOH A . B 2 HOH 62 262 119 HOH HOH A . B 2 HOH 63 263 32 HOH HOH A . B 2 HOH 64 264 104 HOH HOH A . B 2 HOH 65 265 113 HOH HOH A . B 2 HOH 66 266 200 HOH HOH A . B 2 HOH 67 267 5 HOH HOH A . B 2 HOH 68 268 46 HOH HOH A . B 2 HOH 69 269 84 HOH HOH A . B 2 HOH 70 270 123 HOH HOH A . B 2 HOH 71 271 10 HOH HOH A . B 2 HOH 72 272 127 HOH HOH A . B 2 HOH 73 273 61 HOH HOH A . B 2 HOH 74 274 68 HOH HOH A . B 2 HOH 75 275 18 HOH HOH A . B 2 HOH 76 276 23 HOH HOH A . B 2 HOH 77 277 154 HOH HOH A . B 2 HOH 78 278 1 HOH HOH A . B 2 HOH 79 279 163 HOH HOH A . B 2 HOH 80 280 261 HOH HOH A . B 2 HOH 81 281 7 HOH HOH A . B 2 HOH 82 282 290 HOH HOH A . B 2 HOH 83 283 270 HOH HOH A . B 2 HOH 84 284 102 HOH HOH A . B 2 HOH 85 285 312 HOH HOH A . B 2 HOH 86 286 12 HOH HOH A . B 2 HOH 87 287 3 HOH HOH A . B 2 HOH 88 288 42 HOH HOH A . B 2 HOH 89 289 17 HOH HOH A . B 2 HOH 90 290 6 HOH HOH A . B 2 HOH 91 291 26 HOH HOH A . B 2 HOH 92 292 80 HOH HOH A . B 2 HOH 93 293 226 HOH HOH A . B 2 HOH 94 294 303 HOH HOH A . B 2 HOH 95 295 30 HOH HOH A . B 2 HOH 96 296 15 HOH HOH A . B 2 HOH 97 297 186 HOH HOH A . B 2 HOH 98 298 25 HOH HOH A . B 2 HOH 99 299 301 HOH HOH A . B 2 HOH 100 300 29 HOH HOH A . B 2 HOH 101 301 225 HOH HOH A . B 2 HOH 102 302 31 HOH HOH A . B 2 HOH 103 303 96 HOH HOH A . B 2 HOH 104 304 343 HOH HOH A . B 2 HOH 105 305 2 HOH HOH A . B 2 HOH 106 306 162 HOH HOH A . B 2 HOH 107 307 77 HOH HOH A . B 2 HOH 108 308 37 HOH HOH A . B 2 HOH 109 309 45 HOH HOH A . B 2 HOH 110 310 177 HOH HOH A . B 2 HOH 111 311 20 HOH HOH A . B 2 HOH 112 312 157 HOH HOH A . B 2 HOH 113 313 160 HOH HOH A . B 2 HOH 114 314 99 HOH HOH A . B 2 HOH 115 315 8 HOH HOH A . B 2 HOH 116 316 139 HOH HOH A . B 2 HOH 117 317 291 HOH HOH A . B 2 HOH 118 318 39 HOH HOH A . B 2 HOH 119 319 199 HOH HOH A . B 2 HOH 120 320 62 HOH HOH A . B 2 HOH 121 321 297 HOH HOH A . B 2 HOH 122 322 24 HOH HOH A . B 2 HOH 123 323 111 HOH HOH A . B 2 HOH 124 324 214 HOH HOH A . B 2 HOH 125 325 258 HOH HOH A . B 2 HOH 126 326 173 HOH HOH A . B 2 HOH 127 327 64 HOH HOH A . B 2 HOH 128 328 40 HOH HOH A . B 2 HOH 129 329 165 HOH HOH A . B 2 HOH 130 330 49 HOH HOH A . B 2 HOH 131 331 91 HOH HOH A . B 2 HOH 132 332 264 HOH HOH A . B 2 HOH 133 333 121 HOH HOH A . B 2 HOH 134 334 19 HOH HOH A . B 2 HOH 135 335 78 HOH HOH A . B 2 HOH 136 336 35 HOH HOH A . B 2 HOH 137 337 193 HOH HOH A . B 2 HOH 138 338 60 HOH HOH A . B 2 HOH 139 339 116 HOH HOH A . B 2 HOH 140 340 79 HOH HOH A . B 2 HOH 141 341 271 HOH HOH A . B 2 HOH 142 342 213 HOH HOH A . B 2 HOH 143 343 21 HOH HOH A . B 2 HOH 144 344 118 HOH HOH A . B 2 HOH 145 345 129 HOH HOH A . B 2 HOH 146 346 4 HOH HOH A . B 2 HOH 147 347 179 HOH HOH A . B 2 HOH 148 348 149 HOH HOH A . B 2 HOH 149 349 83 HOH HOH A . B 2 HOH 150 350 201 HOH HOH A . B 2 HOH 151 351 299 HOH HOH A . B 2 HOH 152 352 52 HOH HOH A . B 2 HOH 153 353 147 HOH HOH A . B 2 HOH 154 354 224 HOH HOH A . B 2 HOH 155 355 27 HOH HOH A . B 2 HOH 156 356 315 HOH HOH A . B 2 HOH 157 357 353 HOH HOH A . B 2 HOH 158 358 56 HOH HOH A . B 2 HOH 159 359 16 HOH HOH A . B 2 HOH 160 360 11 HOH HOH A . B 2 HOH 161 361 13 HOH HOH A . B 2 HOH 162 362 94 HOH HOH A . B 2 HOH 163 363 34 HOH HOH A . B 2 HOH 164 364 82 HOH HOH A . B 2 HOH 165 365 322 HOH HOH A . B 2 HOH 166 366 251 HOH HOH A . B 2 HOH 167 367 234 HOH HOH A . B 2 HOH 168 368 178 HOH HOH A . B 2 HOH 169 369 305 HOH HOH A . B 2 HOH 170 370 126 HOH HOH A . B 2 HOH 171 371 43 HOH HOH A . B 2 HOH 172 372 319 HOH HOH A . B 2 HOH 173 373 153 HOH HOH A . B 2 HOH 174 374 59 HOH HOH A . B 2 HOH 175 375 86 HOH HOH A . B 2 HOH 176 376 122 HOH HOH A . B 2 HOH 177 377 108 HOH HOH A . B 2 HOH 178 378 143 HOH HOH A . B 2 HOH 179 379 268 HOH HOH A . B 2 HOH 180 380 352 HOH HOH A . B 2 HOH 181 381 240 HOH HOH A . B 2 HOH 182 382 350 HOH HOH A . B 2 HOH 183 383 107 HOH HOH A . B 2 HOH 184 384 183 HOH HOH A . B 2 HOH 185 385 97 HOH HOH A . B 2 HOH 186 386 246 HOH HOH A . B 2 HOH 187 387 211 HOH HOH A . B 2 HOH 188 388 110 HOH HOH A . B 2 HOH 189 389 286 HOH HOH A . B 2 HOH 190 390 337 HOH HOH A . B 2 HOH 191 391 313 HOH HOH A . B 2 HOH 192 392 140 HOH HOH A . B 2 HOH 193 393 28 HOH HOH A . B 2 HOH 194 394 181 HOH HOH A . B 2 HOH 195 395 323 HOH HOH A . B 2 HOH 196 396 307 HOH HOH A . B 2 HOH 197 397 256 HOH HOH A . B 2 HOH 198 398 187 HOH HOH A . B 2 HOH 199 399 354 HOH HOH A . B 2 HOH 200 400 346 HOH HOH A . B 2 HOH 201 401 328 HOH HOH A . B 2 HOH 202 402 132 HOH HOH A . B 2 HOH 203 403 238 HOH HOH A . B 2 HOH 204 404 151 HOH HOH A . B 2 HOH 205 405 267 HOH HOH A . B 2 HOH 206 406 265 HOH HOH A . B 2 HOH 207 407 336 HOH HOH A . B 2 HOH 208 408 218 HOH HOH A . B 2 HOH 209 409 54 HOH HOH A . B 2 HOH 210 410 114 HOH HOH A . B 2 HOH 211 411 215 HOH HOH A . B 2 HOH 212 412 191 HOH HOH A . B 2 HOH 213 413 253 HOH HOH A . B 2 HOH 214 414 168 HOH HOH A . B 2 HOH 215 415 176 HOH HOH A . B 2 HOH 216 416 349 HOH HOH A . B 2 HOH 217 417 325 HOH HOH A . B 2 HOH 218 418 321 HOH HOH A . B 2 HOH 219 419 318 HOH HOH A . B 2 HOH 220 420 300 HOH HOH A . B 2 HOH 221 421 255 HOH HOH A . B 2 HOH 222 422 196 HOH HOH A . B 2 HOH 223 423 276 HOH HOH A . B 2 HOH 224 424 167 HOH HOH A . B 2 HOH 225 425 348 HOH HOH A . B 2 HOH 226 426 285 HOH HOH A . B 2 HOH 227 427 146 HOH HOH A . B 2 HOH 228 428 194 HOH HOH A . B 2 HOH 229 429 166 HOH HOH A . B 2 HOH 230 430 266 HOH HOH A . B 2 HOH 231 431 257 HOH HOH A . B 2 HOH 232 432 75 HOH HOH A . B 2 HOH 233 433 230 HOH HOH A . B 2 HOH 234 434 135 HOH HOH A . B 2 HOH 235 435 180 HOH HOH A . B 2 HOH 236 436 101 HOH HOH A . B 2 HOH 237 437 250 HOH HOH A . B 2 HOH 238 438 331 HOH HOH A . B 2 HOH 239 439 50 HOH HOH A . B 2 HOH 240 440 152 HOH HOH A . B 2 HOH 241 441 242 HOH HOH A . B 2 HOH 242 442 220 HOH HOH A . B 2 HOH 243 443 280 HOH HOH A . B 2 HOH 244 444 329 HOH HOH A . B 2 HOH 245 445 192 HOH HOH A . B 2 HOH 246 446 103 HOH HOH A . B 2 HOH 247 447 263 HOH HOH A . B 2 HOH 248 448 145 HOH HOH A . B 2 HOH 249 449 222 HOH HOH A . B 2 HOH 250 450 223 HOH HOH A . B 2 HOH 251 451 58 HOH HOH A . B 2 HOH 252 452 294 HOH HOH A . B 2 HOH 253 453 338 HOH HOH A . B 2 HOH 254 454 342 HOH HOH A . B 2 HOH 255 455 279 HOH HOH A . B 2 HOH 256 456 158 HOH HOH A . B 2 HOH 257 457 327 HOH HOH A . B 2 HOH 258 458 175 HOH HOH A . B 2 HOH 259 459 188 HOH HOH A . B 2 HOH 260 460 95 HOH HOH A . B 2 HOH 261 461 306 HOH HOH A . B 2 HOH 262 462 247 HOH HOH A . B 2 HOH 263 463 281 HOH HOH A . B 2 HOH 264 464 156 HOH HOH A . B 2 HOH 265 465 210 HOH HOH A . B 2 HOH 266 466 125 HOH HOH A . B 2 HOH 267 467 260 HOH HOH A . B 2 HOH 268 468 202 HOH HOH A . B 2 HOH 269 469 90 HOH HOH A . B 2 HOH 270 470 100 HOH HOH A . B 2 HOH 271 471 310 HOH HOH A . B 2 HOH 272 472 289 HOH HOH A . B 2 HOH 273 473 164 HOH HOH A . B 2 HOH 274 474 233 HOH HOH A . B 2 HOH 275 475 232 HOH HOH A . B 2 HOH 276 476 207 HOH HOH A . B 2 HOH 277 477 195 HOH HOH A . B 2 HOH 278 478 124 HOH HOH A . B 2 HOH 279 479 245 HOH HOH A . B 2 HOH 280 480 249 HOH HOH A . B 2 HOH 281 481 169 HOH HOH A . B 2 HOH 282 482 170 HOH HOH A . B 2 HOH 283 483 295 HOH HOH A . B 2 HOH 284 484 345 HOH HOH A . B 2 HOH 285 485 109 HOH HOH A . B 2 HOH 286 486 72 HOH HOH A . B 2 HOH 287 487 120 HOH HOH A . B 2 HOH 288 488 219 HOH HOH A . B 2 HOH 289 489 98 HOH HOH A . B 2 HOH 290 490 248 HOH HOH A . B 2 HOH 291 491 235 HOH HOH A . B 2 HOH 292 492 272 HOH HOH A . B 2 HOH 293 493 311 HOH HOH A . B 2 HOH 294 494 128 HOH HOH A . B 2 HOH 295 495 293 HOH HOH A . B 2 HOH 296 496 335 HOH HOH A . B 2 HOH 297 497 73 HOH HOH A . B 2 HOH 298 498 221 HOH HOH A . B 2 HOH 299 499 198 HOH HOH A . B 2 HOH 300 500 339 HOH HOH A . B 2 HOH 301 501 340 HOH HOH A . B 2 HOH 302 502 74 HOH HOH A . B 2 HOH 303 503 44 HOH HOH A . B 2 HOH 304 504 341 HOH HOH A . B 2 HOH 305 505 243 HOH HOH A . B 2 HOH 306 506 189 HOH HOH A . B 2 HOH 307 507 137 HOH HOH A . B 2 HOH 308 508 282 HOH HOH A . B 2 HOH 309 509 155 HOH HOH A . B 2 HOH 310 510 344 HOH HOH A . B 2 HOH 311 511 184 HOH HOH A . B 2 HOH 312 512 88 HOH HOH A . B 2 HOH 313 513 161 HOH HOH A . B 2 HOH 314 514 298 HOH HOH A . B 2 HOH 315 515 71 HOH HOH A . B 2 HOH 316 516 172 HOH HOH A . B 2 HOH 317 517 347 HOH HOH A . B 2 HOH 318 518 351 HOH HOH A . B 2 HOH 319 519 277 HOH HOH A . B 2 HOH 320 520 159 HOH HOH A . B 2 HOH 321 521 65 HOH HOH A . B 2 HOH 322 522 81 HOH HOH A . B 2 HOH 323 523 174 HOH HOH A . B 2 HOH 324 524 92 HOH HOH A . B 2 HOH 325 525 259 HOH HOH A . B 2 HOH 326 526 228 HOH HOH A . B 2 HOH 327 527 288 HOH HOH A . B 2 HOH 328 528 284 HOH HOH A . B 2 HOH 329 529 197 HOH HOH A . B 2 HOH 330 530 254 HOH HOH A . B 2 HOH 331 531 317 HOH HOH A . B 2 HOH 332 532 292 HOH HOH A . B 2 HOH 333 533 229 HOH HOH A . B 2 HOH 334 534 333 HOH HOH A . B 2 HOH 335 535 296 HOH HOH A . B 2 HOH 336 536 185 HOH HOH A . B 2 HOH 337 537 138 HOH HOH A . B 2 HOH 338 538 334 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2015-10-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.9_1692 1 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.15 2 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 3 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XSCALE ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 5 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 HZ2 A LYS 125 ? ? O A HOH 203 ? ? 1.54 2 1 O A HOH 418 ? ? O A HOH 517 ? ? 2.07 3 1 O A HOH 303 ? ? O A HOH 345 ? ? 2.08 4 1 O A HOH 397 ? ? O A HOH 495 ? ? 2.17 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O A HOH 412 ? ? 1_555 O A HOH 454 ? ? 4_455 2.05 2 1 O A HOH 209 ? ? 1_555 O A HOH 400 ? ? 1_655 2.11 3 1 O A HOH 218 ? ? 1_555 O A HOH 354 ? ? 3_555 2.13 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PHE A 60 ? A -141.93 -71.53 2 1 PHE A 60 ? B -140.46 -77.81 3 1 ASN A 71 ? B -155.23 21.89 # _pdbx_distant_solvent_atoms.id 1 _pdbx_distant_solvent_atoms.PDB_model_num 1 _pdbx_distant_solvent_atoms.auth_atom_id O _pdbx_distant_solvent_atoms.label_alt_id ? _pdbx_distant_solvent_atoms.auth_asym_id A _pdbx_distant_solvent_atoms.auth_comp_id HOH _pdbx_distant_solvent_atoms.auth_seq_id 538 _pdbx_distant_solvent_atoms.PDB_ins_code ? _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance 7.22 _pdbx_distant_solvent_atoms.neighbor_ligand_distance . # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #