data_4YVJ # _entry.id 4YVJ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4YVJ pdb_00004yvj 10.2210/pdb4yvj/pdb WWPDB D_1000208131 ? ? # loop_ _pdbx_database_related.content_type _pdbx_database_related.db_id _pdbx_database_related.db_name _pdbx_database_related.details unspecified 4YVG PDB . unspecified 4YVH PDB . unspecified 4YVI PDB . unspecified 4YVK PDB . # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 4YVJ _pdbx_database_status.recvd_initial_deposition_date 2015-03-20 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Yoshida, K.' 1 'Ito, T.' 2 'Yokoyama, S.' 3 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_id_ASTM PNASA6 _citation.journal_id_CSD 0040 _citation.journal_id_ISSN 1091-6490 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 112 _citation.language ? _citation.page_first E4197 _citation.page_last E4205 _citation.title 'Structural basis for methyl-donor-dependent and sequence-specific binding to tRNA substrates by knotted methyltransferase TrmD.' _citation.year 2015 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1073/pnas.1422981112 _citation.pdbx_database_id_PubMed 26183229 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Ito, T.' 1 ? primary 'Masuda, I.' 2 ? primary 'Yoshida, K.' 3 ? primary 'Goto-Ito, S.' 4 ? primary 'Sekine, S.' 5 ? primary 'Suh, S.W.' 6 ? primary 'Hou, Y.M.' 7 ? primary 'Yokoyama, S.' 8 ? # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 4YVJ _cell.details ? _cell.formula_units_Z ? _cell.length_a 87.400 _cell.length_a_esd ? _cell.length_b 87.400 _cell.length_b_esd ? _cell.length_c 229.000 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 16 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 4YVJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'tRNA (guanine-N(1)-)-methyltransferase' 29750.016 2 2.1.1.228 ? ? ? 2 polymer syn tRNA 23819.105 1 ? ? ? ? 3 non-polymer syn SINEFUNGIN 381.387 2 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'M1G-methyltransferase,tRNA [GM37] methyltransferase' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MGSSHHHHHHSSGLVPRGSHMWIGVISLFPEMFKAITEFGVTGRAVKHNLLKVECWNPRDFTFDKHKTVDDRPYGGGPGM LMMVQPLRDAIHTAKAAAGEGAKVIYLSPQGRKLDQGGVTELAQNQKLILVCGRYEGIDERLIQTEIDEEWSIGDYVLTG GELPAMTLIDAVARFIPGVLGKQASAEEDSFADGLLDCPHYTRPEVLEGLTVPPVLMSGHHEEIRKWRLKQSLQRTWLRR PELLEGLALTDEQRKLLKEAQAEHNS ; ;MGSSHHHHHHSSGLVPRGSHMWIGVISLFPEMFKAITEFGVTGRAVKHNLLKVECWNPRDFTFDKHKTVDDRPYGGGPGM LMMVQPLRDAIHTAKAAAGEGAKVIYLSPQGRKLDQGGVTELAQNQKLILVCGRYEGIDERLIQTEIDEEWSIGDYVLTG GELPAMTLIDAVARFIPGVLGKQASAEEDSFADGLLDCPHYTRPEVLEGLTVPPVLMSGHHEEIRKWRLKQSLQRTWLRR PELLEGLALTDEQRKLLKEAQAEHNS ; A,B ? 2 polyribonucleotide no no UGGGAGGUCGUCUAACGGUAGGACGGCGGACUCUUGAUCCGCUGGUGGAGGUUCGAGUCCUCCCCUCCCAGCCA UGGGAGGUCGUCUAACGGUAGGACGGCGGACUCUUGAUCCGCUGGUGGAGGUUCGAGUCCUCCCCUCCCAGCCA C ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLY n 1 3 SER n 1 4 SER n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 HIS n 1 11 SER n 1 12 SER n 1 13 GLY n 1 14 LEU n 1 15 VAL n 1 16 PRO n 1 17 ARG n 1 18 GLY n 1 19 SER n 1 20 HIS n 1 21 MET n 1 22 TRP n 1 23 ILE n 1 24 GLY n 1 25 VAL n 1 26 ILE n 1 27 SER n 1 28 LEU n 1 29 PHE n 1 30 PRO n 1 31 GLU n 1 32 MET n 1 33 PHE n 1 34 LYS n 1 35 ALA n 1 36 ILE n 1 37 THR n 1 38 GLU n 1 39 PHE n 1 40 GLY n 1 41 VAL n 1 42 THR n 1 43 GLY n 1 44 ARG n 1 45 ALA n 1 46 VAL n 1 47 LYS n 1 48 HIS n 1 49 ASN n 1 50 LEU n 1 51 LEU n 1 52 LYS n 1 53 VAL n 1 54 GLU n 1 55 CYS n 1 56 TRP n 1 57 ASN n 1 58 PRO n 1 59 ARG n 1 60 ASP n 1 61 PHE n 1 62 THR n 1 63 PHE n 1 64 ASP n 1 65 LYS n 1 66 HIS n 1 67 LYS n 1 68 THR n 1 69 VAL n 1 70 ASP n 1 71 ASP n 1 72 ARG n 1 73 PRO n 1 74 TYR n 1 75 GLY n 1 76 GLY n 1 77 GLY n 1 78 PRO n 1 79 GLY n 1 80 MET n 1 81 LEU n 1 82 MET n 1 83 MET n 1 84 VAL n 1 85 GLN n 1 86 PRO n 1 87 LEU n 1 88 ARG n 1 89 ASP n 1 90 ALA n 1 91 ILE n 1 92 HIS n 1 93 THR n 1 94 ALA n 1 95 LYS n 1 96 ALA n 1 97 ALA n 1 98 ALA n 1 99 GLY n 1 100 GLU n 1 101 GLY n 1 102 ALA n 1 103 LYS n 1 104 VAL n 1 105 ILE n 1 106 TYR n 1 107 LEU n 1 108 SER n 1 109 PRO n 1 110 GLN n 1 111 GLY n 1 112 ARG n 1 113 LYS n 1 114 LEU n 1 115 ASP n 1 116 GLN n 1 117 GLY n 1 118 GLY n 1 119 VAL n 1 120 THR n 1 121 GLU n 1 122 LEU n 1 123 ALA n 1 124 GLN n 1 125 ASN n 1 126 GLN n 1 127 LYS n 1 128 LEU n 1 129 ILE n 1 130 LEU n 1 131 VAL n 1 132 CYS n 1 133 GLY n 1 134 ARG n 1 135 TYR n 1 136 GLU n 1 137 GLY n 1 138 ILE n 1 139 ASP n 1 140 GLU n 1 141 ARG n 1 142 LEU n 1 143 ILE n 1 144 GLN n 1 145 THR n 1 146 GLU n 1 147 ILE n 1 148 ASP n 1 149 GLU n 1 150 GLU n 1 151 TRP n 1 152 SER n 1 153 ILE n 1 154 GLY n 1 155 ASP n 1 156 TYR n 1 157 VAL n 1 158 LEU n 1 159 THR n 1 160 GLY n 1 161 GLY n 1 162 GLU n 1 163 LEU n 1 164 PRO n 1 165 ALA n 1 166 MET n 1 167 THR n 1 168 LEU n 1 169 ILE n 1 170 ASP n 1 171 ALA n 1 172 VAL n 1 173 ALA n 1 174 ARG n 1 175 PHE n 1 176 ILE n 1 177 PRO n 1 178 GLY n 1 179 VAL n 1 180 LEU n 1 181 GLY n 1 182 LYS n 1 183 GLN n 1 184 ALA n 1 185 SER n 1 186 ALA n 1 187 GLU n 1 188 GLU n 1 189 ASP n 1 190 SER n 1 191 PHE n 1 192 ALA n 1 193 ASP n 1 194 GLY n 1 195 LEU n 1 196 LEU n 1 197 ASP n 1 198 CYS n 1 199 PRO n 1 200 HIS n 1 201 TYR n 1 202 THR n 1 203 ARG n 1 204 PRO n 1 205 GLU n 1 206 VAL n 1 207 LEU n 1 208 GLU n 1 209 GLY n 1 210 LEU n 1 211 THR n 1 212 VAL n 1 213 PRO n 1 214 PRO n 1 215 VAL n 1 216 LEU n 1 217 MET n 1 218 SER n 1 219 GLY n 1 220 HIS n 1 221 HIS n 1 222 GLU n 1 223 GLU n 1 224 ILE n 1 225 ARG n 1 226 LYS n 1 227 TRP n 1 228 ARG n 1 229 LEU n 1 230 LYS n 1 231 GLN n 1 232 SER n 1 233 LEU n 1 234 GLN n 1 235 ARG n 1 236 THR n 1 237 TRP n 1 238 LEU n 1 239 ARG n 1 240 ARG n 1 241 PRO n 1 242 GLU n 1 243 LEU n 1 244 LEU n 1 245 GLU n 1 246 GLY n 1 247 LEU n 1 248 ALA n 1 249 LEU n 1 250 THR n 1 251 ASP n 1 252 GLU n 1 253 GLN n 1 254 ARG n 1 255 LYS n 1 256 LEU n 1 257 LEU n 1 258 LYS n 1 259 GLU n 1 260 ALA n 1 261 GLN n 1 262 ALA n 1 263 GLU n 1 264 HIS n 1 265 ASN n 1 266 SER n 2 1 U n 2 2 G n 2 3 G n 2 4 G n 2 5 A n 2 6 G n 2 7 G n 2 8 U n 2 9 C n 2 10 G n 2 11 U n 2 12 C n 2 13 U n 2 14 A n 2 15 A n 2 16 C n 2 17 G n 2 18 G n 2 19 U n 2 20 A n 2 21 G n 2 22 G n 2 23 A n 2 24 C n 2 25 G n 2 26 G n 2 27 C n 2 28 G n 2 29 G n 2 30 A n 2 31 C n 2 32 U n 2 33 C n 2 34 U n 2 35 U n 2 36 G n 2 37 A n 2 38 U n 2 39 C n 2 40 C n 2 41 G n 2 42 C n 2 43 U n 2 44 G n 2 45 G n 2 46 U n 2 47 G n 2 48 G n 2 49 A n 2 50 G n 2 51 G n 2 52 U n 2 53 U n 2 54 C n 2 55 G n 2 56 A n 2 57 G n 2 58 U n 2 59 C n 2 60 C n 2 61 U n 2 62 C n 2 63 C n 2 64 C n 2 65 C n 2 66 U n 2 67 C n 2 68 C n 2 69 C n 2 70 A n 2 71 G n 2 72 C n 2 73 C n 2 74 A n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 266 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'trmD, HI_0202' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'ATCC 51907 / DSM 11121 / KW20 / Rd' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 71421 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 74 _pdbx_entity_src_syn.organism_scientific 'Thermotoga maritima MSB8' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 243274 _pdbx_entity_src_syn.details ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP TRMD_HAEIN P43912 ? 1 ;MWIGVISLFPEMFKAITEFGVTGRAVKHNLLKVECWNPRDFTFDKHKTVDDRPYGGGPGMLMMVQPLRDAIHTAKAAAGE GAKVIYLSPQGRKLDQGGVTELAQNQKLILVCGRYEGIDERLIQTEIDEEWSIGDYVLTGGELPAMTLIDAVARFIPGVL GKQASAEEDSFADGLLDCPHYTRPEVLEGLTVPPVLMSGHHEEIRKWRLKQSLQRTWLRRPELLEGLALTDEQRKLLKEA QAEHNS ; 1 2 GB AE000512.1 12057205 ? 2 UGGGAGGUCGUCUAACGGUAGGACGGCGGACUCUGGAUCCGCUGGUGGAGGUUCGAGUCCUCCCCUCCCAGCCA 419338 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4YVJ A 21 ? 266 ? P43912 1 ? 246 ? 1 246 2 1 4YVJ B 21 ? 266 ? P43912 1 ? 246 ? 1 246 3 2 4YVJ C 1 ? 74 ? 12057205 419338 ? 419265 ? 1 76 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4YVJ MET A 1 ? UNP P43912 ? ? 'expression tag' -19 1 1 4YVJ GLY A 2 ? UNP P43912 ? ? 'expression tag' -18 2 1 4YVJ SER A 3 ? UNP P43912 ? ? 'expression tag' -17 3 1 4YVJ SER A 4 ? UNP P43912 ? ? 'expression tag' -16 4 1 4YVJ HIS A 5 ? UNP P43912 ? ? 'expression tag' -15 5 1 4YVJ HIS A 6 ? UNP P43912 ? ? 'expression tag' -14 6 1 4YVJ HIS A 7 ? UNP P43912 ? ? 'expression tag' -13 7 1 4YVJ HIS A 8 ? UNP P43912 ? ? 'expression tag' -12 8 1 4YVJ HIS A 9 ? UNP P43912 ? ? 'expression tag' -11 9 1 4YVJ HIS A 10 ? UNP P43912 ? ? 'expression tag' -10 10 1 4YVJ SER A 11 ? UNP P43912 ? ? 'expression tag' -9 11 1 4YVJ SER A 12 ? UNP P43912 ? ? 'expression tag' -8 12 1 4YVJ GLY A 13 ? UNP P43912 ? ? 'expression tag' -7 13 1 4YVJ LEU A 14 ? UNP P43912 ? ? 'expression tag' -6 14 1 4YVJ VAL A 15 ? UNP P43912 ? ? 'expression tag' -5 15 1 4YVJ PRO A 16 ? UNP P43912 ? ? 'expression tag' -4 16 1 4YVJ ARG A 17 ? UNP P43912 ? ? 'expression tag' -3 17 1 4YVJ GLY A 18 ? UNP P43912 ? ? 'expression tag' -2 18 1 4YVJ SER A 19 ? UNP P43912 ? ? 'expression tag' -1 19 1 4YVJ HIS A 20 ? UNP P43912 ? ? 'expression tag' 0 20 2 4YVJ MET B 1 ? UNP P43912 ? ? 'expression tag' -19 21 2 4YVJ GLY B 2 ? UNP P43912 ? ? 'expression tag' -18 22 2 4YVJ SER B 3 ? UNP P43912 ? ? 'expression tag' -17 23 2 4YVJ SER B 4 ? UNP P43912 ? ? 'expression tag' -16 24 2 4YVJ HIS B 5 ? UNP P43912 ? ? 'expression tag' -15 25 2 4YVJ HIS B 6 ? UNP P43912 ? ? 'expression tag' -14 26 2 4YVJ HIS B 7 ? UNP P43912 ? ? 'expression tag' -13 27 2 4YVJ HIS B 8 ? UNP P43912 ? ? 'expression tag' -12 28 2 4YVJ HIS B 9 ? UNP P43912 ? ? 'expression tag' -11 29 2 4YVJ HIS B 10 ? UNP P43912 ? ? 'expression tag' -10 30 2 4YVJ SER B 11 ? UNP P43912 ? ? 'expression tag' -9 31 2 4YVJ SER B 12 ? UNP P43912 ? ? 'expression tag' -8 32 2 4YVJ GLY B 13 ? UNP P43912 ? ? 'expression tag' -7 33 2 4YVJ LEU B 14 ? UNP P43912 ? ? 'expression tag' -6 34 2 4YVJ VAL B 15 ? UNP P43912 ? ? 'expression tag' -5 35 2 4YVJ PRO B 16 ? UNP P43912 ? ? 'expression tag' -4 36 2 4YVJ ARG B 17 ? UNP P43912 ? ? 'expression tag' -3 37 2 4YVJ GLY B 18 ? UNP P43912 ? ? 'expression tag' -2 38 2 4YVJ SER B 19 ? UNP P43912 ? ? 'expression tag' -1 39 2 4YVJ HIS B 20 ? UNP P43912 ? ? 'expression tag' 0 40 3 4YVJ U C 35 ? GB 12057205 G 419304 'engineered mutation' 36 41 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SFG non-polymer . SINEFUNGIN ADENOSYL-ORNITHINE 'C15 H23 N7 O5' 381.387 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 4YVJ _exptl.crystals_number ? _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.62 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 53.13 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details 'sodium acetate trihydrate, ammonium phosphate monobasic, PEG 20000' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 270' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2011-02-25 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'PHOTON FACTORY BEAMLINE AR-NE3A' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.0 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline AR-NE3A _diffrn_source.pdbx_synchrotron_site 'Photon Factory' # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 4YVJ _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.9 _reflns.d_resolution_low 50 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 20544 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.6 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 9.9 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 20.0 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _refine.aniso_B[1][1] 0.8402 _refine.aniso_B[1][2] -0.0000 _refine.aniso_B[1][3] -0.0000 _refine.aniso_B[2][2] 0.8402 _refine.aniso_B[2][3] 0.0000 _refine.aniso_B[3][3] -1.6805 _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 4YVJ _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.90 _refine.ls_d_res_low 31.617 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 20515 _refine.ls_number_reflns_R_free 1046 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.87 _refine.ls_percent_reflns_R_free 5.10 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2030 _refine.ls_R_factor_R_free 0.2775 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1990 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol 39.317 _refine.solvent_model_param_ksol 0.328 _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.39 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 4YVI _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.00 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.72 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 24.60 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.41 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3846 _refine_hist.pdbx_number_atoms_nucleic_acid 1516 _refine_hist.pdbx_number_atoms_ligand 54 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 5416 _refine_hist.d_res_high 2.90 _refine_hist.d_res_low 31.617 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.022 ? 5895 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.593 ? 8037 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 16.670 ? 2352 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.089 ? 948 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.010 ? 767 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.8985 3.0512 . . 144 2713 100.00 . . . 0.3238 . 0.2662 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.0512 3.2421 . . 159 2724 100.00 . . . 0.3672 . 0.2439 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.2421 3.4922 . . 151 2724 100.00 . . . 0.3261 . 0.2164 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.4922 3.8431 . . 139 2748 100.00 . . . 0.2803 . 0.2043 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.8431 4.3979 . . 144 2784 100.00 . . . 0.2667 . 0.1766 . . . . . . . . . . 'X-RAY DIFFRACTION' 4.3979 5.5360 . . 161 2798 100.00 . . . 0.2387 . 0.1772 . . . . . . . . . . 'X-RAY DIFFRACTION' 5.5360 31.6188 . . 148 2978 99.00 . . . 0.2587 . 0.1938 . . . . . . . . . . # _struct.entry_id 4YVJ _struct.title 'Crystal Structure of H. influenzae TrmD in complex with sinefungin and tRNA variant (G36U)' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 4YVJ _struct_keywords.text 'MTase, SPOUT, tRNA, TRANSFERASE-RNA complex' _struct_keywords.pdbx_keywords TRANSFERASE/RNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 3 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 PHE A 29 ? MET A 32 ? PHE A 9 MET A 12 5 ? 4 HELX_P HELX_P2 AA2 PHE A 33 ? GLU A 38 ? PHE A 13 GLU A 18 1 ? 6 HELX_P HELX_P3 AA3 PHE A 39 ? HIS A 48 ? PHE A 19 HIS A 28 1 ? 10 HELX_P HELX_P4 AA4 ASN A 57 ? THR A 62 ? ASN A 37 THR A 42 5 ? 6 HELX_P HELX_P5 AA5 MET A 83 ? GLY A 99 ? MET A 63 GLY A 79 1 ? 17 HELX_P HELX_P6 AA6 ASP A 115 ? ASN A 125 ? ASP A 95 ASN A 105 1 ? 11 HELX_P HELX_P7 AA7 ASP A 139 ? ILE A 147 ? ASP A 119 ILE A 127 1 ? 9 HELX_P HELX_P8 AA8 GLY A 161 ? ARG A 174 ? GLY A 141 ARG A 154 1 ? 14 HELX_P HELX_P9 AA9 PRO A 213 ? SER A 218 ? PRO A 193 SER A 198 5 ? 6 HELX_P HELX_P10 AB1 HIS A 220 ? ARG A 240 ? HIS A 200 ARG A 220 1 ? 21 HELX_P HELX_P11 AB2 ARG A 240 ? GLY A 246 ? ARG A 220 GLY A 226 1 ? 7 HELX_P HELX_P12 AB3 THR A 250 ? ASN A 265 ? THR A 230 ASN A 245 1 ? 16 HELX_P HELX_P13 AB4 PHE B 29 ? MET B 32 ? PHE B 9 MET B 12 5 ? 4 HELX_P HELX_P14 AB5 PHE B 33 ? GLU B 38 ? PHE B 13 GLU B 18 1 ? 6 HELX_P HELX_P15 AB6 PHE B 39 ? HIS B 48 ? PHE B 19 HIS B 28 1 ? 10 HELX_P HELX_P16 AB7 ASN B 57 ? THR B 62 ? ASN B 37 THR B 42 5 ? 6 HELX_P HELX_P17 AB8 MET B 83 ? GLY B 99 ? MET B 63 GLY B 79 1 ? 17 HELX_P HELX_P18 AB9 ASP B 115 ? ALA B 123 ? ASP B 95 ALA B 103 1 ? 9 HELX_P HELX_P19 AC1 ASP B 139 ? ILE B 147 ? ASP B 119 ILE B 127 1 ? 9 HELX_P HELX_P20 AC2 GLY B 161 ? ARG B 174 ? GLY B 141 ARG B 154 1 ? 14 HELX_P HELX_P21 AC3 GLN B 183 ? GLU B 187 ? GLN B 163 GLU B 167 5 ? 5 HELX_P HELX_P22 AC4 PRO B 213 ? GLY B 219 ? PRO B 193 GLY B 199 1 ? 7 HELX_P HELX_P23 AC5 HIS B 220 ? ARG B 240 ? HIS B 200 ARG B 220 1 ? 21 HELX_P HELX_P24 AC6 PRO B 241 ? GLY B 246 ? PRO B 221 GLY B 226 1 ? 6 HELX_P HELX_P25 AC7 THR B 250 ? ASN B 265 ? THR B 230 ASN B 245 1 ? 16 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? C G 2 N1 ? ? ? 1_555 C C 69 O2 ? ? C G 2 C C 71 1_555 ? ? ? ? ? ? 'REVERSED WATSON-CRICK' ? ? ? hydrog2 hydrog ? ? C G 2 N2 ? ? ? 1_555 C C 69 N3 ? ? C G 2 C C 71 1_555 ? ? ? ? ? ? 'REVERSED WATSON-CRICK' ? ? ? hydrog3 hydrog ? ? C G 3 N1 ? ? ? 1_555 C C 68 N3 ? ? C G 3 C C 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? C G 3 N2 ? ? ? 1_555 C C 68 O2 ? ? C G 3 C C 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? C G 3 O6 ? ? ? 1_555 C C 68 N4 ? ? C G 3 C C 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? C G 4 N1 ? ? ? 1_555 C C 67 N3 ? ? C G 4 C C 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? C G 4 N2 ? ? ? 1_555 C C 67 O2 ? ? C G 4 C C 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? C G 4 O6 ? ? ? 1_555 C C 67 N4 ? ? C G 4 C C 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? C A 5 N1 ? ? ? 1_555 C U 66 N3 ? ? C A 5 C U 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? C A 5 N6 ? ? ? 1_555 C U 66 O4 ? ? C A 5 C U 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? C G 6 N1 ? ? ? 1_555 C C 65 N3 ? ? C G 6 C C 67 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? C G 6 N2 ? ? ? 1_555 C C 65 O2 ? ? C G 6 C C 67 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? C G 6 O6 ? ? ? 1_555 C C 65 N4 ? ? C G 6 C C 67 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? C G 7 N1 ? ? ? 1_555 C C 64 N3 ? ? C G 7 C C 66 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? C G 7 N2 ? ? ? 1_555 C C 64 O2 ? ? C G 7 C C 66 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? C G 7 O6 ? ? ? 1_555 C C 64 N4 ? ? C G 7 C C 66 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? C U 8 N3 ? ? ? 1_555 C A 14 N7 ? ? C U 8 C A 14 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog18 hydrog ? ? C U 8 O2 ? ? ? 1_555 C A 14 N6 ? ? C U 8 C A 14 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog19 hydrog ? ? C U 8 O2 ? ? ? 1_555 C G 45 N2 ? ? C U 8 C G 46 1_555 ? ? ? ? ? ? 'U-G MISPAIR' ? ? ? hydrog20 hydrog ? ? C C 9 N4 ? ? ? 1_555 C G 22 N7 ? ? C C 9 C G 23 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog21 hydrog ? ? C G 10 N1 ? ? ? 1_555 C C 24 N3 ? ? C G 10 C C 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? C G 10 N2 ? ? ? 1_555 C C 24 O2 ? ? C G 10 C C 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? C G 10 O6 ? ? ? 1_555 C C 24 N4 ? ? C G 10 C C 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? C G 10 O6 ? ? ? 1_555 C G 44 N2 ? ? C G 10 C G 45 1_555 ? ? ? ? ? ? 'G-G MISPAIR' ? ? ? hydrog25 hydrog ? ? C U 11 N3 ? ? ? 1_555 C A 23 N1 ? ? C U 11 C A 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? C U 11 O4 ? ? ? 1_555 C A 23 N6 ? ? C U 11 C A 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? C C 12 N3 ? ? ? 1_555 C G 22 N1 ? ? C C 12 C G 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? C C 12 N4 ? ? ? 1_555 C G 22 O6 ? ? C C 12 C G 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? C C 12 O2 ? ? ? 1_555 C G 22 N2 ? ? C C 12 C G 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? C U 13 N3 ? ? ? 1_555 C G 21 O6 ? ? C U 13 C G 22 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog31 hydrog ? ? C U 13 O2 ? ? ? 1_555 C G 21 N1 ? ? C U 13 C G 22 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog32 hydrog ? ? C U 13 O4 ? ? ? 1_555 C G 45 N2 ? ? C U 13 C G 46 1_555 ? ? ? ? ? ? 'U-G MISPAIR' ? ? ? hydrog33 hydrog ? ? C A 14 N6 ? ? ? 1_555 C A 20 N3 ? ? C A 14 C A 21 1_555 ? ? ? ? ? ? 'A-A MISPAIR' ? ? ? hydrog34 hydrog ? ? C A 15 N1 ? ? ? 1_555 C U 46 N3 ? ? C A 15 C U 48 1_555 ? ? ? ? ? ? 'REVERSED WATSON-CRICK' ? ? ? hydrog35 hydrog ? ? C A 15 N6 ? ? ? 1_555 C U 46 O2 ? ? C A 15 C U 48 1_555 ? ? ? ? ? ? 'REVERSED WATSON-CRICK' ? ? ? hydrog36 hydrog ? ? C G 17 N1 ? ? ? 1_555 C U 53 O2 ? ? C G 18 C U 55 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? hydrog37 hydrog ? ? C G 18 N1 ? ? ? 1_555 C C 54 N3 ? ? C G 19 C C 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? C G 18 N2 ? ? ? 1_555 C C 54 O2 ? ? C G 19 C C 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? C G 18 O6 ? ? ? 1_555 C C 54 N4 ? ? C G 19 C C 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? C G 21 N7 ? ? ? 1_555 C G 45 N1 ? ? C G 22 C G 46 1_555 ? ? ? ? ? ? TYPE_7_PAIR ? ? ? hydrog41 hydrog ? ? C G 21 O6 ? ? ? 1_555 C G 45 N2 ? ? C G 22 C G 46 1_555 ? ? ? ? ? ? TYPE_7_PAIR ? ? ? hydrog42 hydrog ? ? C G 25 N1 ? ? ? 1_555 C U 43 O2 ? ? C G 26 C U 44 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog43 hydrog ? ? C G 25 O6 ? ? ? 1_555 C U 43 N3 ? ? C G 26 C U 44 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog44 hydrog ? ? C G 26 N1 ? ? ? 1_555 C C 42 N3 ? ? C G 27 C C 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? C G 26 N2 ? ? ? 1_555 C C 42 O2 ? ? C G 27 C C 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? C G 26 O6 ? ? ? 1_555 C C 42 N4 ? ? C G 27 C C 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? C C 27 N3 ? ? ? 1_555 C G 41 N1 ? ? C C 28 C G 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? C C 27 N4 ? ? ? 1_555 C G 41 O6 ? ? C C 28 C G 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? C C 27 O2 ? ? ? 1_555 C G 41 N2 ? ? C C 28 C G 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? C G 28 N1 ? ? ? 1_555 C C 40 N3 ? ? C G 29 C C 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? C G 28 N2 ? ? ? 1_555 C C 40 O2 ? ? C G 29 C C 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? C G 28 O6 ? ? ? 1_555 C C 40 N4 ? ? C G 29 C C 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? C G 29 N1 ? ? ? 1_555 C C 39 N3 ? ? C G 30 C C 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? C G 29 N2 ? ? ? 1_555 C C 39 O2 ? ? C G 30 C C 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? C G 29 O6 ? ? ? 1_555 C C 39 N4 ? ? C G 30 C C 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? C A 30 N1 ? ? ? 1_555 C U 38 N3 ? ? C A 31 C U 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? C A 30 N6 ? ? ? 1_555 C U 38 O4 ? ? C A 31 C U 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? C C 31 N3 ? ? ? 1_555 C A 37 N6 ? ? C C 32 C A 38 1_555 ? ? ? ? ? ? 'C-A MISPAIR' ? ? ? hydrog59 hydrog ? ? C C 31 O2 ? ? ? 1_555 C A 37 N6 ? ? C C 32 C A 38 1_555 ? ? ? ? ? ? 'C-A MISPAIR' ? ? ? hydrog60 hydrog ? ? C G 47 N1 ? ? ? 1_555 C C 63 N3 ? ? C G 49 C C 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? C G 47 N2 ? ? ? 1_555 C C 63 O2 ? ? C G 49 C C 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? C G 47 O6 ? ? ? 1_555 C C 63 N4 ? ? C G 49 C C 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? C G 48 N1 ? ? ? 1_555 C C 62 N3 ? ? C G 50 C C 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? C G 48 N2 ? ? ? 1_555 C C 62 O2 ? ? C G 50 C C 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? C G 48 O6 ? ? ? 1_555 C C 62 N4 ? ? C G 50 C C 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? C A 49 N1 ? ? ? 1_555 C U 61 N3 ? ? C A 51 C U 63 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? C A 49 N6 ? ? ? 1_555 C U 61 O4 ? ? C A 51 C U 63 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? C G 50 N1 ? ? ? 1_555 C C 60 N3 ? ? C G 52 C C 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog69 hydrog ? ? C G 50 N2 ? ? ? 1_555 C C 60 O2 ? ? C G 52 C C 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog70 hydrog ? ? C G 50 O6 ? ? ? 1_555 C C 60 N4 ? ? C G 52 C C 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog71 hydrog ? ? C G 51 N1 ? ? ? 1_555 C C 59 N3 ? ? C G 53 C C 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog72 hydrog ? ? C G 51 N2 ? ? ? 1_555 C C 59 O2 ? ? C G 53 C C 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog73 hydrog ? ? C G 51 O6 ? ? ? 1_555 C C 59 N4 ? ? C G 53 C C 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog74 hydrog ? ? C U 52 N3 ? ? ? 1_555 C A 56 N7 ? ? C U 54 C A 58 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog75 hydrog ? ? C U 52 O2 ? ? ? 1_555 C A 56 N6 ? ? C U 54 C A 58 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 ARG 203 A . ? ARG 183 A PRO 204 A ? PRO 184 A 1 1.17 2 ARG 203 B . ? ARG 183 B PRO 204 B ? PRO 184 B 1 -0.30 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 6 ? AA2 ? 2 ? AA3 ? 2 ? AA4 ? 6 ? AA5 ? 2 ? AA6 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? parallel AA1 2 3 ? parallel AA1 3 4 ? parallel AA1 4 5 ? parallel AA1 5 6 ? parallel AA2 1 2 ? anti-parallel AA3 1 2 ? anti-parallel AA4 1 2 ? parallel AA4 2 3 ? parallel AA4 3 4 ? parallel AA4 4 5 ? parallel AA4 5 6 ? parallel AA5 1 2 ? anti-parallel AA6 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 LEU A 51 ? TRP A 56 ? LEU A 31 TRP A 36 AA1 2 MET A 21 ? ILE A 26 ? MET A 1 ILE A 6 AA1 3 LYS A 127 ? VAL A 131 ? LYS A 107 VAL A 111 AA1 4 LYS A 103 ? LEU A 107 ? LYS A 83 LEU A 87 AA1 5 GLU A 149 ? SER A 152 ? GLU A 129 SER A 132 AA1 6 ARG A 112 ? LYS A 113 ? ARG A 92 LYS A 93 AA2 1 ASP A 70 ? ASP A 71 ? ASP A 50 ASP A 51 AA2 2 LEU A 81 ? MET A 82 ? LEU A 61 MET A 62 AA3 1 VAL A 206 ? LEU A 207 ? VAL A 186 LEU A 187 AA3 2 LEU A 210 ? THR A 211 ? LEU A 190 THR A 191 AA4 1 LEU B 51 ? TRP B 56 ? LEU B 31 TRP B 36 AA4 2 MET B 21 ? ILE B 26 ? MET B 1 ILE B 6 AA4 3 LYS B 127 ? CYS B 132 ? LYS B 107 CYS B 112 AA4 4 LYS B 103 ? LEU B 107 ? LYS B 83 LEU B 87 AA4 5 GLU B 149 ? SER B 152 ? GLU B 129 SER B 132 AA4 6 ARG B 112 ? LYS B 113 ? ARG B 92 LYS B 93 AA5 1 ASP B 70 ? ASP B 71 ? ASP B 50 ASP B 51 AA5 2 LEU B 81 ? MET B 82 ? LEU B 61 MET B 62 AA6 1 VAL B 206 ? LEU B 207 ? VAL B 186 LEU B 187 AA6 2 LEU B 210 ? THR B 211 ? LEU B 190 THR B 191 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O GLU A 54 ? O GLU A 34 N VAL A 25 ? N VAL A 5 AA1 2 3 N GLY A 24 ? N GLY A 4 O LEU A 130 ? O LEU A 110 AA1 3 4 O ILE A 129 ? O ILE A 109 N ILE A 105 ? N ILE A 85 AA1 4 5 N TYR A 106 ? N TYR A 86 O GLU A 149 ? O GLU A 129 AA1 5 6 O GLU A 150 ? O GLU A 130 N ARG A 112 ? N ARG A 92 AA2 1 2 N ASP A 71 ? N ASP A 51 O LEU A 81 ? O LEU A 61 AA3 1 2 N LEU A 207 ? N LEU A 187 O LEU A 210 ? O LEU A 190 AA4 1 2 O LYS B 52 ? O LYS B 32 N MET B 21 ? N MET B 1 AA4 2 3 N GLY B 24 ? N GLY B 4 O LEU B 128 ? O LEU B 108 AA4 3 4 O VAL B 131 ? O VAL B 111 N ILE B 105 ? N ILE B 85 AA4 4 5 N TYR B 106 ? N TYR B 86 O GLU B 149 ? O GLU B 129 AA4 5 6 O SER B 152 ? O SER B 132 N ARG B 112 ? N ARG B 92 AA5 1 2 N ASP B 71 ? N ASP B 51 O LEU B 81 ? O LEU B 61 AA6 1 2 N LEU B 207 ? N LEU B 187 O LEU B 210 ? O LEU B 190 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A SFG 301 ? 21 'binding site for residue SFG A 301' AC2 Software B SFG 301 ? 21 'binding site for residue SFG B 301' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 21 TYR A 106 ? TYR A 86 . ? 1_555 ? 2 AC1 21 LEU A 107 ? LEU A 87 . ? 1_555 ? 3 AC1 21 SER A 108 ? SER A 88 . ? 1_555 ? 4 AC1 21 PRO A 109 ? PRO A 89 . ? 1_555 ? 5 AC1 21 GLN A 110 ? GLN A 90 . ? 1_555 ? 6 AC1 21 GLY A 133 ? GLY A 113 . ? 1_555 ? 7 AC1 21 TYR A 135 ? TYR A 115 . ? 1_555 ? 8 AC1 21 GLU A 136 ? GLU A 116 . ? 1_555 ? 9 AC1 21 SER A 152 ? SER A 132 . ? 1_555 ? 10 AC1 21 ILE A 153 ? ILE A 133 . ? 1_555 ? 11 AC1 21 GLY A 154 ? GLY A 134 . ? 1_555 ? 12 AC1 21 TYR A 156 ? TYR A 136 . ? 1_555 ? 13 AC1 21 LEU A 158 ? LEU A 138 . ? 1_555 ? 14 AC1 21 THR A 159 ? THR A 139 . ? 1_555 ? 15 AC1 21 GLY A 160 ? GLY A 140 . ? 1_555 ? 16 AC1 21 GLY A 161 ? GLY A 141 . ? 1_555 ? 17 AC1 21 PRO A 164 ? PRO A 144 . ? 1_555 ? 18 AC1 21 ASP B 189 ? ASP B 169 . ? 1_555 ? 19 AC1 21 SER B 190 ? SER B 170 . ? 1_555 ? 20 AC1 21 ASP B 197 ? ASP B 177 . ? 1_555 ? 21 AC1 21 G C 36 ? G C 37 . ? 1_555 ? 22 AC2 21 ASP A 197 ? ASP A 177 . ? 1_555 ? 23 AC2 21 HIS A 200 ? HIS A 180 . ? 1_555 ? 24 AC2 21 TYR B 106 ? TYR B 86 . ? 1_555 ? 25 AC2 21 LEU B 107 ? LEU B 87 . ? 1_555 ? 26 AC2 21 SER B 108 ? SER B 88 . ? 1_555 ? 27 AC2 21 PRO B 109 ? PRO B 89 . ? 1_555 ? 28 AC2 21 GLN B 110 ? GLN B 90 . ? 1_555 ? 29 AC2 21 GLY B 133 ? GLY B 113 . ? 1_555 ? 30 AC2 21 ARG B 134 ? ARG B 114 . ? 1_555 ? 31 AC2 21 TYR B 135 ? TYR B 115 . ? 1_555 ? 32 AC2 21 GLU B 136 ? GLU B 116 . ? 1_555 ? 33 AC2 21 GLY B 137 ? GLY B 117 . ? 1_555 ? 34 AC2 21 TRP B 151 ? TRP B 131 . ? 1_555 ? 35 AC2 21 SER B 152 ? SER B 132 . ? 1_555 ? 36 AC2 21 ILE B 153 ? ILE B 133 . ? 1_555 ? 37 AC2 21 GLY B 154 ? GLY B 134 . ? 1_555 ? 38 AC2 21 TYR B 156 ? TYR B 136 . ? 1_555 ? 39 AC2 21 LEU B 158 ? LEU B 138 . ? 1_555 ? 40 AC2 21 GLY B 160 ? GLY B 140 . ? 1_555 ? 41 AC2 21 GLY B 161 ? GLY B 141 . ? 1_555 ? 42 AC2 21 PRO B 164 ? PRO B 144 . ? 1_555 ? # _atom_sites.entry_id 4YVJ _atom_sites.fract_transf_matrix[1][1] 0.011442 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011442 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.004367 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -19 ? ? ? A . n A 1 2 GLY 2 -18 ? ? ? A . n A 1 3 SER 3 -17 ? ? ? A . n A 1 4 SER 4 -16 ? ? ? A . n A 1 5 HIS 5 -15 ? ? ? A . n A 1 6 HIS 6 -14 ? ? ? A . n A 1 7 HIS 7 -13 ? ? ? A . n A 1 8 HIS 8 -12 ? ? ? A . n A 1 9 HIS 9 -11 ? ? ? A . n A 1 10 HIS 10 -10 ? ? ? A . n A 1 11 SER 11 -9 ? ? ? A . n A 1 12 SER 12 -8 ? ? ? A . n A 1 13 GLY 13 -7 ? ? ? A . n A 1 14 LEU 14 -6 ? ? ? A . n A 1 15 VAL 15 -5 ? ? ? A . n A 1 16 PRO 16 -4 ? ? ? A . n A 1 17 ARG 17 -3 ? ? ? A . n A 1 18 GLY 18 -2 ? ? ? A . n A 1 19 SER 19 -1 -1 SER SER A . n A 1 20 HIS 20 0 0 HIS HIS A . n A 1 21 MET 21 1 1 MET MET A . n A 1 22 TRP 22 2 2 TRP TRP A . n A 1 23 ILE 23 3 3 ILE ILE A . n A 1 24 GLY 24 4 4 GLY GLY A . n A 1 25 VAL 25 5 5 VAL VAL A . n A 1 26 ILE 26 6 6 ILE ILE A . n A 1 27 SER 27 7 7 SER SER A . n A 1 28 LEU 28 8 8 LEU LEU A . n A 1 29 PHE 29 9 9 PHE PHE A . n A 1 30 PRO 30 10 10 PRO PRO A . n A 1 31 GLU 31 11 11 GLU GLU A . n A 1 32 MET 32 12 12 MET MET A . n A 1 33 PHE 33 13 13 PHE PHE A . n A 1 34 LYS 34 14 14 LYS LYS A . n A 1 35 ALA 35 15 15 ALA ALA A . n A 1 36 ILE 36 16 16 ILE ILE A . n A 1 37 THR 37 17 17 THR THR A . n A 1 38 GLU 38 18 18 GLU GLU A . n A 1 39 PHE 39 19 19 PHE PHE A . n A 1 40 GLY 40 20 20 GLY GLY A . n A 1 41 VAL 41 21 21 VAL VAL A . n A 1 42 THR 42 22 22 THR THR A . n A 1 43 GLY 43 23 23 GLY GLY A . n A 1 44 ARG 44 24 24 ARG ARG A . n A 1 45 ALA 45 25 25 ALA ALA A . n A 1 46 VAL 46 26 26 VAL VAL A . n A 1 47 LYS 47 27 27 LYS LYS A . n A 1 48 HIS 48 28 28 HIS HIS A . n A 1 49 ASN 49 29 29 ASN ASN A . n A 1 50 LEU 50 30 30 LEU LEU A . n A 1 51 LEU 51 31 31 LEU LEU A . n A 1 52 LYS 52 32 32 LYS LYS A . n A 1 53 VAL 53 33 33 VAL VAL A . n A 1 54 GLU 54 34 34 GLU GLU A . n A 1 55 CYS 55 35 35 CYS CYS A . n A 1 56 TRP 56 36 36 TRP TRP A . n A 1 57 ASN 57 37 37 ASN ASN A . n A 1 58 PRO 58 38 38 PRO PRO A . n A 1 59 ARG 59 39 39 ARG ARG A . n A 1 60 ASP 60 40 40 ASP ASP A . n A 1 61 PHE 61 41 41 PHE PHE A . n A 1 62 THR 62 42 42 THR THR A . n A 1 63 PHE 63 43 43 PHE PHE A . n A 1 64 ASP 64 44 44 ASP ASP A . n A 1 65 LYS 65 45 45 LYS LYS A . n A 1 66 HIS 66 46 46 HIS HIS A . n A 1 67 LYS 67 47 47 LYS LYS A . n A 1 68 THR 68 48 48 THR THR A . n A 1 69 VAL 69 49 49 VAL VAL A . n A 1 70 ASP 70 50 50 ASP ASP A . n A 1 71 ASP 71 51 51 ASP ASP A . n A 1 72 ARG 72 52 52 ARG ARG A . n A 1 73 PRO 73 53 53 PRO PRO A . n A 1 74 TYR 74 54 54 TYR TYR A . n A 1 75 GLY 75 55 55 GLY GLY A . n A 1 76 GLY 76 56 56 GLY GLY A . n A 1 77 GLY 77 57 57 GLY GLY A . n A 1 78 PRO 78 58 58 PRO PRO A . n A 1 79 GLY 79 59 59 GLY GLY A . n A 1 80 MET 80 60 60 MET MET A . n A 1 81 LEU 81 61 61 LEU LEU A . n A 1 82 MET 82 62 62 MET MET A . n A 1 83 MET 83 63 63 MET MET A . n A 1 84 VAL 84 64 64 VAL VAL A . n A 1 85 GLN 85 65 65 GLN GLN A . n A 1 86 PRO 86 66 66 PRO PRO A . n A 1 87 LEU 87 67 67 LEU LEU A . n A 1 88 ARG 88 68 68 ARG ARG A . n A 1 89 ASP 89 69 69 ASP ASP A . n A 1 90 ALA 90 70 70 ALA ALA A . n A 1 91 ILE 91 71 71 ILE ILE A . n A 1 92 HIS 92 72 72 HIS HIS A . n A 1 93 THR 93 73 73 THR THR A . n A 1 94 ALA 94 74 74 ALA ALA A . n A 1 95 LYS 95 75 75 LYS LYS A . n A 1 96 ALA 96 76 76 ALA ALA A . n A 1 97 ALA 97 77 77 ALA ALA A . n A 1 98 ALA 98 78 78 ALA ALA A . n A 1 99 GLY 99 79 79 GLY GLY A . n A 1 100 GLU 100 80 80 GLU GLU A . n A 1 101 GLY 101 81 81 GLY GLY A . n A 1 102 ALA 102 82 82 ALA ALA A . n A 1 103 LYS 103 83 83 LYS LYS A . n A 1 104 VAL 104 84 84 VAL VAL A . n A 1 105 ILE 105 85 85 ILE ILE A . n A 1 106 TYR 106 86 86 TYR TYR A . n A 1 107 LEU 107 87 87 LEU LEU A . n A 1 108 SER 108 88 88 SER SER A . n A 1 109 PRO 109 89 89 PRO PRO A . n A 1 110 GLN 110 90 90 GLN GLN A . n A 1 111 GLY 111 91 91 GLY GLY A . n A 1 112 ARG 112 92 92 ARG ARG A . n A 1 113 LYS 113 93 93 LYS LYS A . n A 1 114 LEU 114 94 94 LEU LEU A . n A 1 115 ASP 115 95 95 ASP ASP A . n A 1 116 GLN 116 96 96 GLN GLN A . n A 1 117 GLY 117 97 97 GLY GLY A . n A 1 118 GLY 118 98 98 GLY GLY A . n A 1 119 VAL 119 99 99 VAL VAL A . n A 1 120 THR 120 100 100 THR THR A . n A 1 121 GLU 121 101 101 GLU GLU A . n A 1 122 LEU 122 102 102 LEU LEU A . n A 1 123 ALA 123 103 103 ALA ALA A . n A 1 124 GLN 124 104 104 GLN GLN A . n A 1 125 ASN 125 105 105 ASN ASN A . n A 1 126 GLN 126 106 106 GLN GLN A . n A 1 127 LYS 127 107 107 LYS LYS A . n A 1 128 LEU 128 108 108 LEU LEU A . n A 1 129 ILE 129 109 109 ILE ILE A . n A 1 130 LEU 130 110 110 LEU LEU A . n A 1 131 VAL 131 111 111 VAL VAL A . n A 1 132 CYS 132 112 112 CYS CYS A . n A 1 133 GLY 133 113 113 GLY GLY A . n A 1 134 ARG 134 114 114 ARG ARG A . n A 1 135 TYR 135 115 115 TYR TYR A . n A 1 136 GLU 136 116 116 GLU GLU A . n A 1 137 GLY 137 117 117 GLY GLY A . n A 1 138 ILE 138 118 118 ILE ILE A . n A 1 139 ASP 139 119 119 ASP ASP A . n A 1 140 GLU 140 120 120 GLU GLU A . n A 1 141 ARG 141 121 121 ARG ARG A . n A 1 142 LEU 142 122 122 LEU LEU A . n A 1 143 ILE 143 123 123 ILE ILE A . n A 1 144 GLN 144 124 124 GLN GLN A . n A 1 145 THR 145 125 125 THR THR A . n A 1 146 GLU 146 126 126 GLU GLU A . n A 1 147 ILE 147 127 127 ILE ILE A . n A 1 148 ASP 148 128 128 ASP ASP A . n A 1 149 GLU 149 129 129 GLU GLU A . n A 1 150 GLU 150 130 130 GLU GLU A . n A 1 151 TRP 151 131 131 TRP TRP A . n A 1 152 SER 152 132 132 SER SER A . n A 1 153 ILE 153 133 133 ILE ILE A . n A 1 154 GLY 154 134 134 GLY GLY A . n A 1 155 ASP 155 135 135 ASP ASP A . n A 1 156 TYR 156 136 136 TYR TYR A . n A 1 157 VAL 157 137 137 VAL VAL A . n A 1 158 LEU 158 138 138 LEU LEU A . n A 1 159 THR 159 139 139 THR THR A . n A 1 160 GLY 160 140 140 GLY GLY A . n A 1 161 GLY 161 141 141 GLY GLY A . n A 1 162 GLU 162 142 142 GLU GLU A . n A 1 163 LEU 163 143 143 LEU LEU A . n A 1 164 PRO 164 144 144 PRO PRO A . n A 1 165 ALA 165 145 145 ALA ALA A . n A 1 166 MET 166 146 146 MET MET A . n A 1 167 THR 167 147 147 THR THR A . n A 1 168 LEU 168 148 148 LEU LEU A . n A 1 169 ILE 169 149 149 ILE ILE A . n A 1 170 ASP 170 150 150 ASP ASP A . n A 1 171 ALA 171 151 151 ALA ALA A . n A 1 172 VAL 172 152 152 VAL VAL A . n A 1 173 ALA 173 153 153 ALA ALA A . n A 1 174 ARG 174 154 154 ARG ARG A . n A 1 175 PHE 175 155 155 PHE PHE A . n A 1 176 ILE 176 156 156 ILE ILE A . n A 1 177 PRO 177 157 157 PRO PRO A . n A 1 178 GLY 178 158 158 GLY GLY A . n A 1 179 VAL 179 159 159 VAL VAL A . n A 1 180 LEU 180 160 ? ? ? A . n A 1 181 GLY 181 161 ? ? ? A . n A 1 182 LYS 182 162 ? ? ? A . n A 1 183 GLN 183 163 ? ? ? A . n A 1 184 ALA 184 164 ? ? ? A . n A 1 185 SER 185 165 ? ? ? A . n A 1 186 ALA 186 166 ? ? ? A . n A 1 187 GLU 187 167 ? ? ? A . n A 1 188 GLU 188 168 ? ? ? A . n A 1 189 ASP 189 169 169 ASP ASP A . n A 1 190 SER 190 170 170 SER SER A . n A 1 191 PHE 191 171 171 PHE PHE A . n A 1 192 ALA 192 172 172 ALA ALA A . n A 1 193 ASP 193 173 173 ASP ASP A . n A 1 194 GLY 194 174 174 GLY GLY A . n A 1 195 LEU 195 175 175 LEU LEU A . n A 1 196 LEU 196 176 176 LEU LEU A . n A 1 197 ASP 197 177 177 ASP ASP A . n A 1 198 CYS 198 178 178 CYS CYS A . n A 1 199 PRO 199 179 179 PRO PRO A . n A 1 200 HIS 200 180 180 HIS HIS A . n A 1 201 TYR 201 181 181 TYR TYR A . n A 1 202 THR 202 182 182 THR THR A . n A 1 203 ARG 203 183 183 ARG ARG A . n A 1 204 PRO 204 184 184 PRO PRO A . n A 1 205 GLU 205 185 185 GLU GLU A . n A 1 206 VAL 206 186 186 VAL VAL A . n A 1 207 LEU 207 187 187 LEU LEU A . n A 1 208 GLU 208 188 188 GLU GLU A . n A 1 209 GLY 209 189 189 GLY GLY A . n A 1 210 LEU 210 190 190 LEU LEU A . n A 1 211 THR 211 191 191 THR THR A . n A 1 212 VAL 212 192 192 VAL VAL A . n A 1 213 PRO 213 193 193 PRO PRO A . n A 1 214 PRO 214 194 194 PRO PRO A . n A 1 215 VAL 215 195 195 VAL VAL A . n A 1 216 LEU 216 196 196 LEU LEU A . n A 1 217 MET 217 197 197 MET MET A . n A 1 218 SER 218 198 198 SER SER A . n A 1 219 GLY 219 199 199 GLY GLY A . n A 1 220 HIS 220 200 200 HIS HIS A . n A 1 221 HIS 221 201 201 HIS HIS A . n A 1 222 GLU 222 202 202 GLU GLU A . n A 1 223 GLU 223 203 203 GLU GLU A . n A 1 224 ILE 224 204 204 ILE ILE A . n A 1 225 ARG 225 205 205 ARG ARG A . n A 1 226 LYS 226 206 206 LYS LYS A . n A 1 227 TRP 227 207 207 TRP TRP A . n A 1 228 ARG 228 208 208 ARG ARG A . n A 1 229 LEU 229 209 209 LEU LEU A . n A 1 230 LYS 230 210 210 LYS LYS A . n A 1 231 GLN 231 211 211 GLN GLN A . n A 1 232 SER 232 212 212 SER SER A . n A 1 233 LEU 233 213 213 LEU LEU A . n A 1 234 GLN 234 214 214 GLN GLN A . n A 1 235 ARG 235 215 215 ARG ARG A . n A 1 236 THR 236 216 216 THR THR A . n A 1 237 TRP 237 217 217 TRP TRP A . n A 1 238 LEU 238 218 218 LEU LEU A . n A 1 239 ARG 239 219 219 ARG ARG A . n A 1 240 ARG 240 220 220 ARG ARG A . n A 1 241 PRO 241 221 221 PRO PRO A . n A 1 242 GLU 242 222 222 GLU GLU A . n A 1 243 LEU 243 223 223 LEU LEU A . n A 1 244 LEU 244 224 224 LEU LEU A . n A 1 245 GLU 245 225 225 GLU GLU A . n A 1 246 GLY 246 226 226 GLY GLY A . n A 1 247 LEU 247 227 227 LEU LEU A . n A 1 248 ALA 248 228 228 ALA ALA A . n A 1 249 LEU 249 229 229 LEU LEU A . n A 1 250 THR 250 230 230 THR THR A . n A 1 251 ASP 251 231 231 ASP ASP A . n A 1 252 GLU 252 232 232 GLU GLU A . n A 1 253 GLN 253 233 233 GLN GLN A . n A 1 254 ARG 254 234 234 ARG ARG A . n A 1 255 LYS 255 235 235 LYS LYS A . n A 1 256 LEU 256 236 236 LEU LEU A . n A 1 257 LEU 257 237 237 LEU LEU A . n A 1 258 LYS 258 238 238 LYS LYS A . n A 1 259 GLU 259 239 239 GLU GLU A . n A 1 260 ALA 260 240 240 ALA ALA A . n A 1 261 GLN 261 241 241 GLN GLN A . n A 1 262 ALA 262 242 242 ALA ALA A . n A 1 263 GLU 263 243 243 GLU GLU A . n A 1 264 HIS 264 244 244 HIS HIS A . n A 1 265 ASN 265 245 245 ASN ASN A . n A 1 266 SER 266 246 246 SER SER A . n B 1 1 MET 1 -19 ? ? ? B . n B 1 2 GLY 2 -18 ? ? ? B . n B 1 3 SER 3 -17 ? ? ? B . n B 1 4 SER 4 -16 ? ? ? B . n B 1 5 HIS 5 -15 ? ? ? B . n B 1 6 HIS 6 -14 ? ? ? B . n B 1 7 HIS 7 -13 ? ? ? B . n B 1 8 HIS 8 -12 ? ? ? B . n B 1 9 HIS 9 -11 ? ? ? B . n B 1 10 HIS 10 -10 ? ? ? B . n B 1 11 SER 11 -9 ? ? ? B . n B 1 12 SER 12 -8 ? ? ? B . n B 1 13 GLY 13 -7 ? ? ? B . n B 1 14 LEU 14 -6 ? ? ? B . n B 1 15 VAL 15 -5 ? ? ? B . n B 1 16 PRO 16 -4 ? ? ? B . n B 1 17 ARG 17 -3 ? ? ? B . n B 1 18 GLY 18 -2 -2 GLY GLY B . n B 1 19 SER 19 -1 -1 SER SER B . n B 1 20 HIS 20 0 0 HIS HIS B . n B 1 21 MET 21 1 1 MET MET B . n B 1 22 TRP 22 2 2 TRP TRP B . n B 1 23 ILE 23 3 3 ILE ILE B . n B 1 24 GLY 24 4 4 GLY GLY B . n B 1 25 VAL 25 5 5 VAL VAL B . n B 1 26 ILE 26 6 6 ILE ILE B . n B 1 27 SER 27 7 7 SER SER B . n B 1 28 LEU 28 8 8 LEU LEU B . n B 1 29 PHE 29 9 9 PHE PHE B . n B 1 30 PRO 30 10 10 PRO PRO B . n B 1 31 GLU 31 11 11 GLU GLU B . n B 1 32 MET 32 12 12 MET MET B . n B 1 33 PHE 33 13 13 PHE PHE B . n B 1 34 LYS 34 14 14 LYS LYS B . n B 1 35 ALA 35 15 15 ALA ALA B . n B 1 36 ILE 36 16 16 ILE ILE B . n B 1 37 THR 37 17 17 THR THR B . n B 1 38 GLU 38 18 18 GLU GLU B . n B 1 39 PHE 39 19 19 PHE PHE B . n B 1 40 GLY 40 20 20 GLY GLY B . n B 1 41 VAL 41 21 21 VAL VAL B . n B 1 42 THR 42 22 22 THR THR B . n B 1 43 GLY 43 23 23 GLY GLY B . n B 1 44 ARG 44 24 24 ARG ARG B . n B 1 45 ALA 45 25 25 ALA ALA B . n B 1 46 VAL 46 26 26 VAL VAL B . n B 1 47 LYS 47 27 27 LYS LYS B . n B 1 48 HIS 48 28 28 HIS HIS B . n B 1 49 ASN 49 29 29 ASN ASN B . n B 1 50 LEU 50 30 30 LEU LEU B . n B 1 51 LEU 51 31 31 LEU LEU B . n B 1 52 LYS 52 32 32 LYS LYS B . n B 1 53 VAL 53 33 33 VAL VAL B . n B 1 54 GLU 54 34 34 GLU GLU B . n B 1 55 CYS 55 35 35 CYS CYS B . n B 1 56 TRP 56 36 36 TRP TRP B . n B 1 57 ASN 57 37 37 ASN ASN B . n B 1 58 PRO 58 38 38 PRO PRO B . n B 1 59 ARG 59 39 39 ARG ARG B . n B 1 60 ASP 60 40 40 ASP ASP B . n B 1 61 PHE 61 41 41 PHE PHE B . n B 1 62 THR 62 42 42 THR THR B . n B 1 63 PHE 63 43 43 PHE PHE B . n B 1 64 ASP 64 44 44 ASP ASP B . n B 1 65 LYS 65 45 45 LYS LYS B . n B 1 66 HIS 66 46 46 HIS HIS B . n B 1 67 LYS 67 47 47 LYS LYS B . n B 1 68 THR 68 48 48 THR THR B . n B 1 69 VAL 69 49 49 VAL VAL B . n B 1 70 ASP 70 50 50 ASP ASP B . n B 1 71 ASP 71 51 51 ASP ASP B . n B 1 72 ARG 72 52 52 ARG ARG B . n B 1 73 PRO 73 53 53 PRO PRO B . n B 1 74 TYR 74 54 54 TYR TYR B . n B 1 75 GLY 75 55 55 GLY GLY B . n B 1 76 GLY 76 56 56 GLY GLY B . n B 1 77 GLY 77 57 57 GLY GLY B . n B 1 78 PRO 78 58 58 PRO PRO B . n B 1 79 GLY 79 59 59 GLY GLY B . n B 1 80 MET 80 60 60 MET MET B . n B 1 81 LEU 81 61 61 LEU LEU B . n B 1 82 MET 82 62 62 MET MET B . n B 1 83 MET 83 63 63 MET MET B . n B 1 84 VAL 84 64 64 VAL VAL B . n B 1 85 GLN 85 65 65 GLN GLN B . n B 1 86 PRO 86 66 66 PRO PRO B . n B 1 87 LEU 87 67 67 LEU LEU B . n B 1 88 ARG 88 68 68 ARG ARG B . n B 1 89 ASP 89 69 69 ASP ASP B . n B 1 90 ALA 90 70 70 ALA ALA B . n B 1 91 ILE 91 71 71 ILE ILE B . n B 1 92 HIS 92 72 72 HIS HIS B . n B 1 93 THR 93 73 73 THR THR B . n B 1 94 ALA 94 74 74 ALA ALA B . n B 1 95 LYS 95 75 75 LYS LYS B . n B 1 96 ALA 96 76 76 ALA ALA B . n B 1 97 ALA 97 77 77 ALA ALA B . n B 1 98 ALA 98 78 78 ALA ALA B . n B 1 99 GLY 99 79 79 GLY GLY B . n B 1 100 GLU 100 80 80 GLU GLU B . n B 1 101 GLY 101 81 81 GLY GLY B . n B 1 102 ALA 102 82 82 ALA ALA B . n B 1 103 LYS 103 83 83 LYS LYS B . n B 1 104 VAL 104 84 84 VAL VAL B . n B 1 105 ILE 105 85 85 ILE ILE B . n B 1 106 TYR 106 86 86 TYR TYR B . n B 1 107 LEU 107 87 87 LEU LEU B . n B 1 108 SER 108 88 88 SER SER B . n B 1 109 PRO 109 89 89 PRO PRO B . n B 1 110 GLN 110 90 90 GLN GLN B . n B 1 111 GLY 111 91 91 GLY GLY B . n B 1 112 ARG 112 92 92 ARG ARG B . n B 1 113 LYS 113 93 93 LYS LYS B . n B 1 114 LEU 114 94 94 LEU LEU B . n B 1 115 ASP 115 95 95 ASP ASP B . n B 1 116 GLN 116 96 96 GLN GLN B . n B 1 117 GLY 117 97 97 GLY GLY B . n B 1 118 GLY 118 98 98 GLY GLY B . n B 1 119 VAL 119 99 99 VAL VAL B . n B 1 120 THR 120 100 100 THR THR B . n B 1 121 GLU 121 101 101 GLU GLU B . n B 1 122 LEU 122 102 102 LEU LEU B . n B 1 123 ALA 123 103 103 ALA ALA B . n B 1 124 GLN 124 104 104 GLN GLN B . n B 1 125 ASN 125 105 105 ASN ASN B . n B 1 126 GLN 126 106 106 GLN GLN B . n B 1 127 LYS 127 107 107 LYS LYS B . n B 1 128 LEU 128 108 108 LEU LEU B . n B 1 129 ILE 129 109 109 ILE ILE B . n B 1 130 LEU 130 110 110 LEU LEU B . n B 1 131 VAL 131 111 111 VAL VAL B . n B 1 132 CYS 132 112 112 CYS CYS B . n B 1 133 GLY 133 113 113 GLY GLY B . n B 1 134 ARG 134 114 114 ARG ARG B . n B 1 135 TYR 135 115 115 TYR TYR B . n B 1 136 GLU 136 116 116 GLU GLU B . n B 1 137 GLY 137 117 117 GLY GLY B . n B 1 138 ILE 138 118 118 ILE ILE B . n B 1 139 ASP 139 119 119 ASP ASP B . n B 1 140 GLU 140 120 120 GLU GLU B . n B 1 141 ARG 141 121 121 ARG ARG B . n B 1 142 LEU 142 122 122 LEU LEU B . n B 1 143 ILE 143 123 123 ILE ILE B . n B 1 144 GLN 144 124 124 GLN GLN B . n B 1 145 THR 145 125 125 THR THR B . n B 1 146 GLU 146 126 126 GLU GLU B . n B 1 147 ILE 147 127 127 ILE ILE B . n B 1 148 ASP 148 128 128 ASP ASP B . n B 1 149 GLU 149 129 129 GLU GLU B . n B 1 150 GLU 150 130 130 GLU GLU B . n B 1 151 TRP 151 131 131 TRP TRP B . n B 1 152 SER 152 132 132 SER SER B . n B 1 153 ILE 153 133 133 ILE ILE B . n B 1 154 GLY 154 134 134 GLY GLY B . n B 1 155 ASP 155 135 135 ASP ASP B . n B 1 156 TYR 156 136 136 TYR TYR B . n B 1 157 VAL 157 137 137 VAL VAL B . n B 1 158 LEU 158 138 138 LEU LEU B . n B 1 159 THR 159 139 139 THR THR B . n B 1 160 GLY 160 140 140 GLY GLY B . n B 1 161 GLY 161 141 141 GLY GLY B . n B 1 162 GLU 162 142 142 GLU GLU B . n B 1 163 LEU 163 143 143 LEU LEU B . n B 1 164 PRO 164 144 144 PRO PRO B . n B 1 165 ALA 165 145 145 ALA ALA B . n B 1 166 MET 166 146 146 MET MET B . n B 1 167 THR 167 147 147 THR THR B . n B 1 168 LEU 168 148 148 LEU LEU B . n B 1 169 ILE 169 149 149 ILE ILE B . n B 1 170 ASP 170 150 150 ASP ASP B . n B 1 171 ALA 171 151 151 ALA ALA B . n B 1 172 VAL 172 152 152 VAL VAL B . n B 1 173 ALA 173 153 153 ALA ALA B . n B 1 174 ARG 174 154 154 ARG ARG B . n B 1 175 PHE 175 155 155 PHE PHE B . n B 1 176 ILE 176 156 156 ILE ILE B . n B 1 177 PRO 177 157 157 PRO PRO B . n B 1 178 GLY 178 158 158 GLY GLY B . n B 1 179 VAL 179 159 159 VAL VAL B . n B 1 180 LEU 180 160 160 LEU LEU B . n B 1 181 GLY 181 161 161 GLY GLY B . n B 1 182 LYS 182 162 162 LYS LYS B . n B 1 183 GLN 183 163 163 GLN GLN B . n B 1 184 ALA 184 164 164 ALA ALA B . n B 1 185 SER 185 165 165 SER SER B . n B 1 186 ALA 186 166 166 ALA ALA B . n B 1 187 GLU 187 167 167 GLU GLU B . n B 1 188 GLU 188 168 168 GLU GLU B . n B 1 189 ASP 189 169 169 ASP ASP B . n B 1 190 SER 190 170 170 SER SER B . n B 1 191 PHE 191 171 171 PHE PHE B . n B 1 192 ALA 192 172 172 ALA ALA B . n B 1 193 ASP 193 173 173 ASP ASP B . n B 1 194 GLY 194 174 174 GLY GLY B . n B 1 195 LEU 195 175 175 LEU LEU B . n B 1 196 LEU 196 176 176 LEU LEU B . n B 1 197 ASP 197 177 177 ASP ASP B . n B 1 198 CYS 198 178 178 CYS CYS B . n B 1 199 PRO 199 179 179 PRO PRO B . n B 1 200 HIS 200 180 180 HIS HIS B . n B 1 201 TYR 201 181 181 TYR TYR B . n B 1 202 THR 202 182 182 THR THR B . n B 1 203 ARG 203 183 183 ARG ARG B . n B 1 204 PRO 204 184 184 PRO PRO B . n B 1 205 GLU 205 185 185 GLU GLU B . n B 1 206 VAL 206 186 186 VAL VAL B . n B 1 207 LEU 207 187 187 LEU LEU B . n B 1 208 GLU 208 188 188 GLU GLU B . n B 1 209 GLY 209 189 189 GLY GLY B . n B 1 210 LEU 210 190 190 LEU LEU B . n B 1 211 THR 211 191 191 THR THR B . n B 1 212 VAL 212 192 192 VAL VAL B . n B 1 213 PRO 213 193 193 PRO PRO B . n B 1 214 PRO 214 194 194 PRO PRO B . n B 1 215 VAL 215 195 195 VAL VAL B . n B 1 216 LEU 216 196 196 LEU LEU B . n B 1 217 MET 217 197 197 MET MET B . n B 1 218 SER 218 198 198 SER SER B . n B 1 219 GLY 219 199 199 GLY GLY B . n B 1 220 HIS 220 200 200 HIS HIS B . n B 1 221 HIS 221 201 201 HIS HIS B . n B 1 222 GLU 222 202 202 GLU GLU B . n B 1 223 GLU 223 203 203 GLU GLU B . n B 1 224 ILE 224 204 204 ILE ILE B . n B 1 225 ARG 225 205 205 ARG ARG B . n B 1 226 LYS 226 206 206 LYS LYS B . n B 1 227 TRP 227 207 207 TRP TRP B . n B 1 228 ARG 228 208 208 ARG ARG B . n B 1 229 LEU 229 209 209 LEU LEU B . n B 1 230 LYS 230 210 210 LYS LYS B . n B 1 231 GLN 231 211 211 GLN GLN B . n B 1 232 SER 232 212 212 SER SER B . n B 1 233 LEU 233 213 213 LEU LEU B . n B 1 234 GLN 234 214 214 GLN GLN B . n B 1 235 ARG 235 215 215 ARG ARG B . n B 1 236 THR 236 216 216 THR THR B . n B 1 237 TRP 237 217 217 TRP TRP B . n B 1 238 LEU 238 218 218 LEU LEU B . n B 1 239 ARG 239 219 219 ARG ARG B . n B 1 240 ARG 240 220 220 ARG ARG B . n B 1 241 PRO 241 221 221 PRO PRO B . n B 1 242 GLU 242 222 222 GLU GLU B . n B 1 243 LEU 243 223 223 LEU LEU B . n B 1 244 LEU 244 224 224 LEU LEU B . n B 1 245 GLU 245 225 225 GLU GLU B . n B 1 246 GLY 246 226 226 GLY GLY B . n B 1 247 LEU 247 227 227 LEU LEU B . n B 1 248 ALA 248 228 228 ALA ALA B . n B 1 249 LEU 249 229 229 LEU LEU B . n B 1 250 THR 250 230 230 THR THR B . n B 1 251 ASP 251 231 231 ASP ASP B . n B 1 252 GLU 252 232 232 GLU GLU B . n B 1 253 GLN 253 233 233 GLN GLN B . n B 1 254 ARG 254 234 234 ARG ARG B . n B 1 255 LYS 255 235 235 LYS LYS B . n B 1 256 LEU 256 236 236 LEU LEU B . n B 1 257 LEU 257 237 237 LEU LEU B . n B 1 258 LYS 258 238 238 LYS LYS B . n B 1 259 GLU 259 239 239 GLU GLU B . n B 1 260 ALA 260 240 240 ALA ALA B . n B 1 261 GLN 261 241 241 GLN GLN B . n B 1 262 ALA 262 242 242 ALA ALA B . n B 1 263 GLU 263 243 243 GLU GLU B . n B 1 264 HIS 264 244 244 HIS HIS B . n B 1 265 ASN 265 245 245 ASN ASN B . n B 1 266 SER 266 246 246 SER SER B . n C 2 1 U 1 1 1 U Ur C . n C 2 2 G 2 2 2 G Gr C . n C 2 3 G 3 3 3 G Gr C . n C 2 4 G 4 4 4 G Gr C . n C 2 5 A 5 5 5 A Ar C . n C 2 6 G 6 6 6 G Gr C . n C 2 7 G 7 7 7 G Gr C . n C 2 8 U 8 8 8 U Ur C . n C 2 9 C 9 9 9 C Cr C . n C 2 10 G 10 10 10 G Gr C . n C 2 11 U 11 11 11 U Ur C . n C 2 12 C 12 12 12 C Cr C . n C 2 13 U 13 13 13 U Ur C . n C 2 14 A 14 14 14 A Ar C . n C 2 15 A 15 15 15 A Ar C . n C 2 16 C 16 16 16 C Cr C . n C 2 17 G 17 18 18 G Gr C . n C 2 18 G 18 19 19 G Gr C . n C 2 19 U 19 20 20 U Ur C . n C 2 20 A 20 21 21 A Ar C . n C 2 21 G 21 22 22 G Gr C . n C 2 22 G 22 23 23 G Gr C . n C 2 23 A 23 24 24 A Ar C . n C 2 24 C 24 25 25 C Cr C . n C 2 25 G 25 26 26 G Gr C . n C 2 26 G 26 27 27 G Gr C . n C 2 27 C 27 28 28 C Cr C . n C 2 28 G 28 29 29 G Gr C . n C 2 29 G 29 30 30 G Gr C . n C 2 30 A 30 31 31 A Ar C . n C 2 31 C 31 32 32 C Cr C . n C 2 32 U 32 33 33 U Ur C . n C 2 33 C 33 34 34 C Cr C . n C 2 34 U 34 35 35 U Ur C . n C 2 35 U 35 36 36 U Ur C . n C 2 36 G 36 37 37 G Gr C . n C 2 37 A 37 38 38 A Ar C . n C 2 38 U 38 39 39 U Ur C . n C 2 39 C 39 40 40 C Cr C . n C 2 40 C 40 41 41 C Cr C . n C 2 41 G 41 42 42 G Gr C . n C 2 42 C 42 43 43 C Cr C . n C 2 43 U 43 44 44 U Ur C . n C 2 44 G 44 45 45 G Gr C . n C 2 45 G 45 46 46 G Gr C . n C 2 46 U 46 48 48 U Ur C . n C 2 47 G 47 49 49 G Gr C . n C 2 48 G 48 50 50 G Gr C . n C 2 49 A 49 51 51 A Ar C . n C 2 50 G 50 52 52 G Gr C . n C 2 51 G 51 53 53 G Gr C . n C 2 52 U 52 54 54 U Ur C . n C 2 53 U 53 55 55 U Ur C . n C 2 54 C 54 56 56 C Cr C . n C 2 55 G 55 57 57 G Gr C . n C 2 56 A 56 58 58 A Ar C . n C 2 57 G 57 59 59 G Gr C . n C 2 58 U 58 60 60 U Ur C . n C 2 59 C 59 61 61 C Cr C . n C 2 60 C 60 62 62 C Cr C . n C 2 61 U 61 63 63 U Ur C . n C 2 62 C 62 64 64 C Cr C . n C 2 63 C 63 65 65 C Cr C . n C 2 64 C 64 66 66 C Cr C . n C 2 65 C 65 67 67 C Cr C . n C 2 66 U 66 68 68 U Ur C . n C 2 67 C 67 69 69 C Cr C . n C 2 68 C 68 70 70 C Cr C . n C 2 69 C 69 71 71 C Cr C . n C 2 70 A 70 72 72 A Ar C . n C 2 71 G 71 73 73 G Gr C . n C 2 72 C 72 74 ? ? ? C . n C 2 73 C 73 75 ? ? ? C . n C 2 74 A 74 76 ? ? ? C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 3 SFG 1 301 301 SFG SFG A . E 3 SFG 1 301 301 SFG SFG B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 9860 ? 1 MORE -50 ? 1 'SSA (A^2)' 31340 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-07-15 2 'Structure model' 1 1 2015-07-29 3 'Structure model' 1 2 2015-09-09 4 'Structure model' 1 3 2020-02-19 5 'Structure model' 1 4 2023-11-08 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 5 'Structure model' 'Data collection' 7 5 'Structure model' 'Database references' 8 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' citation 2 4 'Structure model' diffrn_source 3 4 'Structure model' pdbx_struct_oper_list 4 5 'Structure model' chem_comp_atom 5 5 'Structure model' chem_comp_bond 6 5 'Structure model' database_2 7 5 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_citation.journal_id_CSD' 2 4 'Structure model' '_diffrn_source.pdbx_synchrotron_site' 3 4 'Structure model' '_pdbx_struct_oper_list.symmetry_operation' 4 5 'Structure model' '_database_2.pdbx_DOI' 5 5 'Structure model' '_database_2.pdbx_database_accession' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(phenix.refine: 1.7_650)' 1 ? 'data processing' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 2 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 3 ? 'model building' ? ? ? ? ? ? ? ? ? ? ? Coot ? ? ? . 4 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 P _pdbx_validate_rmsd_bond.auth_asym_id_1 C _pdbx_validate_rmsd_bond.auth_comp_id_1 U _pdbx_validate_rmsd_bond.auth_seq_id_1 1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 OP3 _pdbx_validate_rmsd_bond.auth_asym_id_2 C _pdbx_validate_rmsd_bond.auth_comp_id_2 U _pdbx_validate_rmsd_bond.auth_seq_id_2 1 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.483 _pdbx_validate_rmsd_bond.bond_target_value 1.607 _pdbx_validate_rmsd_bond.bond_deviation -0.124 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.012 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 C B ARG 220 ? ? N B PRO 221 ? ? CA B PRO 221 ? ? 129.58 119.30 10.28 1.50 Y 2 1 C5 C C 12 ? ? C6 C C 12 ? ? N1 C C 12 ? ? 117.86 121.00 -3.14 0.50 N 3 1 C6 C C 16 ? ? N1 C C 16 ? ? C2 C C 16 ? ? 117.52 120.30 -2.78 0.40 N 4 1 N3 C G 23 ? ? C4 C G 23 ? ? C5 C G 23 ? ? 131.75 128.60 3.15 0.50 N 5 1 C4 C G 29 ? ? N9 C G 29 ? ? "C1'" C G 29 ? ? 117.76 126.50 -8.74 1.30 N 6 1 C8 C A 58 ? ? N9 C A 58 ? ? C4 C A 58 ? ? 108.60 105.80 2.80 0.40 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 TYR A 115 ? ? 58.39 -134.20 2 1 PHE A 171 ? ? 65.53 -11.64 3 1 ASN A 245 ? ? -154.51 84.77 4 1 TYR B 115 ? ? 59.35 -134.66 5 1 LYS B 162 ? ? -55.56 109.51 6 1 GLN B 163 ? ? 52.10 76.22 7 1 PHE B 171 ? ? 67.24 -11.38 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -19 ? A MET 1 2 1 Y 1 A GLY -18 ? A GLY 2 3 1 Y 1 A SER -17 ? A SER 3 4 1 Y 1 A SER -16 ? A SER 4 5 1 Y 1 A HIS -15 ? A HIS 5 6 1 Y 1 A HIS -14 ? A HIS 6 7 1 Y 1 A HIS -13 ? A HIS 7 8 1 Y 1 A HIS -12 ? A HIS 8 9 1 Y 1 A HIS -11 ? A HIS 9 10 1 Y 1 A HIS -10 ? A HIS 10 11 1 Y 1 A SER -9 ? A SER 11 12 1 Y 1 A SER -8 ? A SER 12 13 1 Y 1 A GLY -7 ? A GLY 13 14 1 Y 1 A LEU -6 ? A LEU 14 15 1 Y 1 A VAL -5 ? A VAL 15 16 1 Y 1 A PRO -4 ? A PRO 16 17 1 Y 1 A ARG -3 ? A ARG 17 18 1 Y 1 A GLY -2 ? A GLY 18 19 1 Y 1 A LEU 160 ? A LEU 180 20 1 Y 1 A GLY 161 ? A GLY 181 21 1 Y 1 A LYS 162 ? A LYS 182 22 1 Y 1 A GLN 163 ? A GLN 183 23 1 Y 1 A ALA 164 ? A ALA 184 24 1 Y 1 A SER 165 ? A SER 185 25 1 Y 1 A ALA 166 ? A ALA 186 26 1 Y 1 A GLU 167 ? A GLU 187 27 1 Y 1 A GLU 168 ? A GLU 188 28 1 Y 1 B MET -19 ? B MET 1 29 1 Y 1 B GLY -18 ? B GLY 2 30 1 Y 1 B SER -17 ? B SER 3 31 1 Y 1 B SER -16 ? B SER 4 32 1 Y 1 B HIS -15 ? B HIS 5 33 1 Y 1 B HIS -14 ? B HIS 6 34 1 Y 1 B HIS -13 ? B HIS 7 35 1 Y 1 B HIS -12 ? B HIS 8 36 1 Y 1 B HIS -11 ? B HIS 9 37 1 Y 1 B HIS -10 ? B HIS 10 38 1 Y 1 B SER -9 ? B SER 11 39 1 Y 1 B SER -8 ? B SER 12 40 1 Y 1 B GLY -7 ? B GLY 13 41 1 Y 1 B LEU -6 ? B LEU 14 42 1 Y 1 B VAL -5 ? B VAL 15 43 1 Y 1 B PRO -4 ? B PRO 16 44 1 Y 1 B ARG -3 ? B ARG 17 45 1 Y 1 C C 74 ? C C 72 46 1 Y 1 C C 75 ? C C 73 47 1 Y 1 C A 76 ? C A 74 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 ALA N N N N 38 ALA CA C N S 39 ALA C C N N 40 ALA O O N N 41 ALA CB C N N 42 ALA OXT O N N 43 ALA H H N N 44 ALA H2 H N N 45 ALA HA H N N 46 ALA HB1 H N N 47 ALA HB2 H N N 48 ALA HB3 H N N 49 ALA HXT H N N 50 ARG N N N N 51 ARG CA C N S 52 ARG C C N N 53 ARG O O N N 54 ARG CB C N N 55 ARG CG C N N 56 ARG CD C N N 57 ARG NE N N N 58 ARG CZ C N N 59 ARG NH1 N N N 60 ARG NH2 N N N 61 ARG OXT O N N 62 ARG H H N N 63 ARG H2 H N N 64 ARG HA H N N 65 ARG HB2 H N N 66 ARG HB3 H N N 67 ARG HG2 H N N 68 ARG HG3 H N N 69 ARG HD2 H N N 70 ARG HD3 H N N 71 ARG HE H N N 72 ARG HH11 H N N 73 ARG HH12 H N N 74 ARG HH21 H N N 75 ARG HH22 H N N 76 ARG HXT H N N 77 ASN N N N N 78 ASN CA C N S 79 ASN C C N N 80 ASN O O N N 81 ASN CB C N N 82 ASN CG C N N 83 ASN OD1 O N N 84 ASN ND2 N N N 85 ASN OXT O N N 86 ASN H H N N 87 ASN H2 H N N 88 ASN HA H N N 89 ASN HB2 H N N 90 ASN HB3 H N N 91 ASN HD21 H N N 92 ASN HD22 H N N 93 ASN HXT H N N 94 ASP N N N N 95 ASP CA C N S 96 ASP C C N N 97 ASP O O N N 98 ASP CB C N N 99 ASP CG C N N 100 ASP OD1 O N N 101 ASP OD2 O N N 102 ASP OXT O N N 103 ASP H H N N 104 ASP H2 H N N 105 ASP HA H N N 106 ASP HB2 H N N 107 ASP HB3 H N N 108 ASP HD2 H N N 109 ASP HXT H N N 110 C OP3 O N N 111 C P P N N 112 C OP1 O N N 113 C OP2 O N N 114 C "O5'" O N N 115 C "C5'" C N N 116 C "C4'" C N R 117 C "O4'" O N N 118 C "C3'" C N S 119 C "O3'" O N N 120 C "C2'" C N R 121 C "O2'" O N N 122 C "C1'" C N R 123 C N1 N N N 124 C C2 C N N 125 C O2 O N N 126 C N3 N N N 127 C C4 C N N 128 C N4 N N N 129 C C5 C N N 130 C C6 C N N 131 C HOP3 H N N 132 C HOP2 H N N 133 C "H5'" H N N 134 C "H5''" H N N 135 C "H4'" H N N 136 C "H3'" H N N 137 C "HO3'" H N N 138 C "H2'" H N N 139 C "HO2'" H N N 140 C "H1'" H N N 141 C H41 H N N 142 C H42 H N N 143 C H5 H N N 144 C H6 H N N 145 CYS N N N N 146 CYS CA C N R 147 CYS C C N N 148 CYS O O N N 149 CYS CB C N N 150 CYS SG S N N 151 CYS OXT O N N 152 CYS H H N N 153 CYS H2 H N N 154 CYS HA H N N 155 CYS HB2 H N N 156 CYS HB3 H N N 157 CYS HG H N N 158 CYS HXT H N N 159 G OP3 O N N 160 G P P N N 161 G OP1 O N N 162 G OP2 O N N 163 G "O5'" O N N 164 G "C5'" C N N 165 G "C4'" C N R 166 G "O4'" O N N 167 G "C3'" C N S 168 G "O3'" O N N 169 G "C2'" C N R 170 G "O2'" O N N 171 G "C1'" C N R 172 G N9 N Y N 173 G C8 C Y N 174 G N7 N Y N 175 G C5 C Y N 176 G C6 C N N 177 G O6 O N N 178 G N1 N N N 179 G C2 C N N 180 G N2 N N N 181 G N3 N N N 182 G C4 C Y N 183 G HOP3 H N N 184 G HOP2 H N N 185 G "H5'" H N N 186 G "H5''" H N N 187 G "H4'" H N N 188 G "H3'" H N N 189 G "HO3'" H N N 190 G "H2'" H N N 191 G "HO2'" H N N 192 G "H1'" H N N 193 G H8 H N N 194 G H1 H N N 195 G H21 H N N 196 G H22 H N N 197 GLN N N N N 198 GLN CA C N S 199 GLN C C N N 200 GLN O O N N 201 GLN CB C N N 202 GLN CG C N N 203 GLN CD C N N 204 GLN OE1 O N N 205 GLN NE2 N N N 206 GLN OXT O N N 207 GLN H H N N 208 GLN H2 H N N 209 GLN HA H N N 210 GLN HB2 H N N 211 GLN HB3 H N N 212 GLN HG2 H N N 213 GLN HG3 H N N 214 GLN HE21 H N N 215 GLN HE22 H N N 216 GLN HXT H N N 217 GLU N N N N 218 GLU CA C N S 219 GLU C C N N 220 GLU O O N N 221 GLU CB C N N 222 GLU CG C N N 223 GLU CD C N N 224 GLU OE1 O N N 225 GLU OE2 O N N 226 GLU OXT O N N 227 GLU H H N N 228 GLU H2 H N N 229 GLU HA H N N 230 GLU HB2 H N N 231 GLU HB3 H N N 232 GLU HG2 H N N 233 GLU HG3 H N N 234 GLU HE2 H N N 235 GLU HXT H N N 236 GLY N N N N 237 GLY CA C N N 238 GLY C C N N 239 GLY O O N N 240 GLY OXT O N N 241 GLY H H N N 242 GLY H2 H N N 243 GLY HA2 H N N 244 GLY HA3 H N N 245 GLY HXT H N N 246 HIS N N N N 247 HIS CA C N S 248 HIS C C N N 249 HIS O O N N 250 HIS CB C N N 251 HIS CG C Y N 252 HIS ND1 N Y N 253 HIS CD2 C Y N 254 HIS CE1 C Y N 255 HIS NE2 N Y N 256 HIS OXT O N N 257 HIS H H N N 258 HIS H2 H N N 259 HIS HA H N N 260 HIS HB2 H N N 261 HIS HB3 H N N 262 HIS HD1 H N N 263 HIS HD2 H N N 264 HIS HE1 H N N 265 HIS HE2 H N N 266 HIS HXT H N N 267 ILE N N N N 268 ILE CA C N S 269 ILE C C N N 270 ILE O O N N 271 ILE CB C N S 272 ILE CG1 C N N 273 ILE CG2 C N N 274 ILE CD1 C N N 275 ILE OXT O N N 276 ILE H H N N 277 ILE H2 H N N 278 ILE HA H N N 279 ILE HB H N N 280 ILE HG12 H N N 281 ILE HG13 H N N 282 ILE HG21 H N N 283 ILE HG22 H N N 284 ILE HG23 H N N 285 ILE HD11 H N N 286 ILE HD12 H N N 287 ILE HD13 H N N 288 ILE HXT H N N 289 LEU N N N N 290 LEU CA C N S 291 LEU C C N N 292 LEU O O N N 293 LEU CB C N N 294 LEU CG C N N 295 LEU CD1 C N N 296 LEU CD2 C N N 297 LEU OXT O N N 298 LEU H H N N 299 LEU H2 H N N 300 LEU HA H N N 301 LEU HB2 H N N 302 LEU HB3 H N N 303 LEU HG H N N 304 LEU HD11 H N N 305 LEU HD12 H N N 306 LEU HD13 H N N 307 LEU HD21 H N N 308 LEU HD22 H N N 309 LEU HD23 H N N 310 LEU HXT H N N 311 LYS N N N N 312 LYS CA C N S 313 LYS C C N N 314 LYS O O N N 315 LYS CB C N N 316 LYS CG C N N 317 LYS CD C N N 318 LYS CE C N N 319 LYS NZ N N N 320 LYS OXT O N N 321 LYS H H N N 322 LYS H2 H N N 323 LYS HA H N N 324 LYS HB2 H N N 325 LYS HB3 H N N 326 LYS HG2 H N N 327 LYS HG3 H N N 328 LYS HD2 H N N 329 LYS HD3 H N N 330 LYS HE2 H N N 331 LYS HE3 H N N 332 LYS HZ1 H N N 333 LYS HZ2 H N N 334 LYS HZ3 H N N 335 LYS HXT H N N 336 MET N N N N 337 MET CA C N S 338 MET C C N N 339 MET O O N N 340 MET CB C N N 341 MET CG C N N 342 MET SD S N N 343 MET CE C N N 344 MET OXT O N N 345 MET H H N N 346 MET H2 H N N 347 MET HA H N N 348 MET HB2 H N N 349 MET HB3 H N N 350 MET HG2 H N N 351 MET HG3 H N N 352 MET HE1 H N N 353 MET HE2 H N N 354 MET HE3 H N N 355 MET HXT H N N 356 PHE N N N N 357 PHE CA C N S 358 PHE C C N N 359 PHE O O N N 360 PHE CB C N N 361 PHE CG C Y N 362 PHE CD1 C Y N 363 PHE CD2 C Y N 364 PHE CE1 C Y N 365 PHE CE2 C Y N 366 PHE CZ C Y N 367 PHE OXT O N N 368 PHE H H N N 369 PHE H2 H N N 370 PHE HA H N N 371 PHE HB2 H N N 372 PHE HB3 H N N 373 PHE HD1 H N N 374 PHE HD2 H N N 375 PHE HE1 H N N 376 PHE HE2 H N N 377 PHE HZ H N N 378 PHE HXT H N N 379 PRO N N N N 380 PRO CA C N S 381 PRO C C N N 382 PRO O O N N 383 PRO CB C N N 384 PRO CG C N N 385 PRO CD C N N 386 PRO OXT O N N 387 PRO H H N N 388 PRO HA H N N 389 PRO HB2 H N N 390 PRO HB3 H N N 391 PRO HG2 H N N 392 PRO HG3 H N N 393 PRO HD2 H N N 394 PRO HD3 H N N 395 PRO HXT H N N 396 SER N N N N 397 SER CA C N S 398 SER C C N N 399 SER O O N N 400 SER CB C N N 401 SER OG O N N 402 SER OXT O N N 403 SER H H N N 404 SER H2 H N N 405 SER HA H N N 406 SER HB2 H N N 407 SER HB3 H N N 408 SER HG H N N 409 SER HXT H N N 410 SFG N N N N 411 SFG CA C N S 412 SFG C C N N 413 SFG O O N N 414 SFG OXT O N N 415 SFG CB C N N 416 SFG CG C N N 417 SFG CD C N S 418 SFG NE N N N 419 SFG "C5'" C N N 420 SFG "C4'" C N R 421 SFG "O4'" O N N 422 SFG "C3'" C N S 423 SFG "O3'" O N N 424 SFG "C2'" C N R 425 SFG "O2'" O N N 426 SFG "C1'" C N R 427 SFG N9 N Y N 428 SFG C8 C Y N 429 SFG N7 N Y N 430 SFG C5 C Y N 431 SFG C6 C Y N 432 SFG N6 N N N 433 SFG N1 N Y N 434 SFG C2 C Y N 435 SFG N3 N Y N 436 SFG C4 C Y N 437 SFG HN1 H N N 438 SFG HN2 H N N 439 SFG HA H N N 440 SFG HXT H N N 441 SFG HB1 H N N 442 SFG HB2 H N N 443 SFG HG1 H N N 444 SFG HG2 H N N 445 SFG HD H N N 446 SFG HNE1 H N N 447 SFG HNE2 H N N 448 SFG "H5'1" H N N 449 SFG "H5'2" H N N 450 SFG "H4'" H N N 451 SFG "H3'" H N N 452 SFG "HO3'" H N N 453 SFG "H2'" H N N 454 SFG "HO2'" H N N 455 SFG "H1'" H N N 456 SFG H8 H N N 457 SFG HN61 H N N 458 SFG HN62 H N N 459 SFG H2 H N N 460 THR N N N N 461 THR CA C N S 462 THR C C N N 463 THR O O N N 464 THR CB C N R 465 THR OG1 O N N 466 THR CG2 C N N 467 THR OXT O N N 468 THR H H N N 469 THR H2 H N N 470 THR HA H N N 471 THR HB H N N 472 THR HG1 H N N 473 THR HG21 H N N 474 THR HG22 H N N 475 THR HG23 H N N 476 THR HXT H N N 477 TRP N N N N 478 TRP CA C N S 479 TRP C C N N 480 TRP O O N N 481 TRP CB C N N 482 TRP CG C Y N 483 TRP CD1 C Y N 484 TRP CD2 C Y N 485 TRP NE1 N Y N 486 TRP CE2 C Y N 487 TRP CE3 C Y N 488 TRP CZ2 C Y N 489 TRP CZ3 C Y N 490 TRP CH2 C Y N 491 TRP OXT O N N 492 TRP H H N N 493 TRP H2 H N N 494 TRP HA H N N 495 TRP HB2 H N N 496 TRP HB3 H N N 497 TRP HD1 H N N 498 TRP HE1 H N N 499 TRP HE3 H N N 500 TRP HZ2 H N N 501 TRP HZ3 H N N 502 TRP HH2 H N N 503 TRP HXT H N N 504 TYR N N N N 505 TYR CA C N S 506 TYR C C N N 507 TYR O O N N 508 TYR CB C N N 509 TYR CG C Y N 510 TYR CD1 C Y N 511 TYR CD2 C Y N 512 TYR CE1 C Y N 513 TYR CE2 C Y N 514 TYR CZ C Y N 515 TYR OH O N N 516 TYR OXT O N N 517 TYR H H N N 518 TYR H2 H N N 519 TYR HA H N N 520 TYR HB2 H N N 521 TYR HB3 H N N 522 TYR HD1 H N N 523 TYR HD2 H N N 524 TYR HE1 H N N 525 TYR HE2 H N N 526 TYR HH H N N 527 TYR HXT H N N 528 U OP3 O N N 529 U P P N N 530 U OP1 O N N 531 U OP2 O N N 532 U "O5'" O N N 533 U "C5'" C N N 534 U "C4'" C N R 535 U "O4'" O N N 536 U "C3'" C N S 537 U "O3'" O N N 538 U "C2'" C N R 539 U "O2'" O N N 540 U "C1'" C N R 541 U N1 N N N 542 U C2 C N N 543 U O2 O N N 544 U N3 N N N 545 U C4 C N N 546 U O4 O N N 547 U C5 C N N 548 U C6 C N N 549 U HOP3 H N N 550 U HOP2 H N N 551 U "H5'" H N N 552 U "H5''" H N N 553 U "H4'" H N N 554 U "H3'" H N N 555 U "HO3'" H N N 556 U "H2'" H N N 557 U "HO2'" H N N 558 U "H1'" H N N 559 U H3 H N N 560 U H5 H N N 561 U H6 H N N 562 VAL N N N N 563 VAL CA C N S 564 VAL C C N N 565 VAL O O N N 566 VAL CB C N N 567 VAL CG1 C N N 568 VAL CG2 C N N 569 VAL OXT O N N 570 VAL H H N N 571 VAL H2 H N N 572 VAL HA H N N 573 VAL HB H N N 574 VAL HG11 H N N 575 VAL HG12 H N N 576 VAL HG13 H N N 577 VAL HG21 H N N 578 VAL HG22 H N N 579 VAL HG23 H N N 580 VAL HXT H N N 581 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 ALA N CA sing N N 40 ALA N H sing N N 41 ALA N H2 sing N N 42 ALA CA C sing N N 43 ALA CA CB sing N N 44 ALA CA HA sing N N 45 ALA C O doub N N 46 ALA C OXT sing N N 47 ALA CB HB1 sing N N 48 ALA CB HB2 sing N N 49 ALA CB HB3 sing N N 50 ALA OXT HXT sing N N 51 ARG N CA sing N N 52 ARG N H sing N N 53 ARG N H2 sing N N 54 ARG CA C sing N N 55 ARG CA CB sing N N 56 ARG CA HA sing N N 57 ARG C O doub N N 58 ARG C OXT sing N N 59 ARG CB CG sing N N 60 ARG CB HB2 sing N N 61 ARG CB HB3 sing N N 62 ARG CG CD sing N N 63 ARG CG HG2 sing N N 64 ARG CG HG3 sing N N 65 ARG CD NE sing N N 66 ARG CD HD2 sing N N 67 ARG CD HD3 sing N N 68 ARG NE CZ sing N N 69 ARG NE HE sing N N 70 ARG CZ NH1 sing N N 71 ARG CZ NH2 doub N N 72 ARG NH1 HH11 sing N N 73 ARG NH1 HH12 sing N N 74 ARG NH2 HH21 sing N N 75 ARG NH2 HH22 sing N N 76 ARG OXT HXT sing N N 77 ASN N CA sing N N 78 ASN N H sing N N 79 ASN N H2 sing N N 80 ASN CA C sing N N 81 ASN CA CB sing N N 82 ASN CA HA sing N N 83 ASN C O doub N N 84 ASN C OXT sing N N 85 ASN CB CG sing N N 86 ASN CB HB2 sing N N 87 ASN CB HB3 sing N N 88 ASN CG OD1 doub N N 89 ASN CG ND2 sing N N 90 ASN ND2 HD21 sing N N 91 ASN ND2 HD22 sing N N 92 ASN OXT HXT sing N N 93 ASP N CA sing N N 94 ASP N H sing N N 95 ASP N H2 sing N N 96 ASP CA C sing N N 97 ASP CA CB sing N N 98 ASP CA HA sing N N 99 ASP C O doub N N 100 ASP C OXT sing N N 101 ASP CB CG sing N N 102 ASP CB HB2 sing N N 103 ASP CB HB3 sing N N 104 ASP CG OD1 doub N N 105 ASP CG OD2 sing N N 106 ASP OD2 HD2 sing N N 107 ASP OXT HXT sing N N 108 C OP3 P sing N N 109 C OP3 HOP3 sing N N 110 C P OP1 doub N N 111 C P OP2 sing N N 112 C P "O5'" sing N N 113 C OP2 HOP2 sing N N 114 C "O5'" "C5'" sing N N 115 C "C5'" "C4'" sing N N 116 C "C5'" "H5'" sing N N 117 C "C5'" "H5''" sing N N 118 C "C4'" "O4'" sing N N 119 C "C4'" "C3'" sing N N 120 C "C4'" "H4'" sing N N 121 C "O4'" "C1'" sing N N 122 C "C3'" "O3'" sing N N 123 C "C3'" "C2'" sing N N 124 C "C3'" "H3'" sing N N 125 C "O3'" "HO3'" sing N N 126 C "C2'" "O2'" sing N N 127 C "C2'" "C1'" sing N N 128 C "C2'" "H2'" sing N N 129 C "O2'" "HO2'" sing N N 130 C "C1'" N1 sing N N 131 C "C1'" "H1'" sing N N 132 C N1 C2 sing N N 133 C N1 C6 sing N N 134 C C2 O2 doub N N 135 C C2 N3 sing N N 136 C N3 C4 doub N N 137 C C4 N4 sing N N 138 C C4 C5 sing N N 139 C N4 H41 sing N N 140 C N4 H42 sing N N 141 C C5 C6 doub N N 142 C C5 H5 sing N N 143 C C6 H6 sing N N 144 CYS N CA sing N N 145 CYS N H sing N N 146 CYS N H2 sing N N 147 CYS CA C sing N N 148 CYS CA CB sing N N 149 CYS CA HA sing N N 150 CYS C O doub N N 151 CYS C OXT sing N N 152 CYS CB SG sing N N 153 CYS CB HB2 sing N N 154 CYS CB HB3 sing N N 155 CYS SG HG sing N N 156 CYS OXT HXT sing N N 157 G OP3 P sing N N 158 G OP3 HOP3 sing N N 159 G P OP1 doub N N 160 G P OP2 sing N N 161 G P "O5'" sing N N 162 G OP2 HOP2 sing N N 163 G "O5'" "C5'" sing N N 164 G "C5'" "C4'" sing N N 165 G "C5'" "H5'" sing N N 166 G "C5'" "H5''" sing N N 167 G "C4'" "O4'" sing N N 168 G "C4'" "C3'" sing N N 169 G "C4'" "H4'" sing N N 170 G "O4'" "C1'" sing N N 171 G "C3'" "O3'" sing N N 172 G "C3'" "C2'" sing N N 173 G "C3'" "H3'" sing N N 174 G "O3'" "HO3'" sing N N 175 G "C2'" "O2'" sing N N 176 G "C2'" "C1'" sing N N 177 G "C2'" "H2'" sing N N 178 G "O2'" "HO2'" sing N N 179 G "C1'" N9 sing N N 180 G "C1'" "H1'" sing N N 181 G N9 C8 sing Y N 182 G N9 C4 sing Y N 183 G C8 N7 doub Y N 184 G C8 H8 sing N N 185 G N7 C5 sing Y N 186 G C5 C6 sing N N 187 G C5 C4 doub Y N 188 G C6 O6 doub N N 189 G C6 N1 sing N N 190 G N1 C2 sing N N 191 G N1 H1 sing N N 192 G C2 N2 sing N N 193 G C2 N3 doub N N 194 G N2 H21 sing N N 195 G N2 H22 sing N N 196 G N3 C4 sing N N 197 GLN N CA sing N N 198 GLN N H sing N N 199 GLN N H2 sing N N 200 GLN CA C sing N N 201 GLN CA CB sing N N 202 GLN CA HA sing N N 203 GLN C O doub N N 204 GLN C OXT sing N N 205 GLN CB CG sing N N 206 GLN CB HB2 sing N N 207 GLN CB HB3 sing N N 208 GLN CG CD sing N N 209 GLN CG HG2 sing N N 210 GLN CG HG3 sing N N 211 GLN CD OE1 doub N N 212 GLN CD NE2 sing N N 213 GLN NE2 HE21 sing N N 214 GLN NE2 HE22 sing N N 215 GLN OXT HXT sing N N 216 GLU N CA sing N N 217 GLU N H sing N N 218 GLU N H2 sing N N 219 GLU CA C sing N N 220 GLU CA CB sing N N 221 GLU CA HA sing N N 222 GLU C O doub N N 223 GLU C OXT sing N N 224 GLU CB CG sing N N 225 GLU CB HB2 sing N N 226 GLU CB HB3 sing N N 227 GLU CG CD sing N N 228 GLU CG HG2 sing N N 229 GLU CG HG3 sing N N 230 GLU CD OE1 doub N N 231 GLU CD OE2 sing N N 232 GLU OE2 HE2 sing N N 233 GLU OXT HXT sing N N 234 GLY N CA sing N N 235 GLY N H sing N N 236 GLY N H2 sing N N 237 GLY CA C sing N N 238 GLY CA HA2 sing N N 239 GLY CA HA3 sing N N 240 GLY C O doub N N 241 GLY C OXT sing N N 242 GLY OXT HXT sing N N 243 HIS N CA sing N N 244 HIS N H sing N N 245 HIS N H2 sing N N 246 HIS CA C sing N N 247 HIS CA CB sing N N 248 HIS CA HA sing N N 249 HIS C O doub N N 250 HIS C OXT sing N N 251 HIS CB CG sing N N 252 HIS CB HB2 sing N N 253 HIS CB HB3 sing N N 254 HIS CG ND1 sing Y N 255 HIS CG CD2 doub Y N 256 HIS ND1 CE1 doub Y N 257 HIS ND1 HD1 sing N N 258 HIS CD2 NE2 sing Y N 259 HIS CD2 HD2 sing N N 260 HIS CE1 NE2 sing Y N 261 HIS CE1 HE1 sing N N 262 HIS NE2 HE2 sing N N 263 HIS OXT HXT sing N N 264 ILE N CA sing N N 265 ILE N H sing N N 266 ILE N H2 sing N N 267 ILE CA C sing N N 268 ILE CA CB sing N N 269 ILE CA HA sing N N 270 ILE C O doub N N 271 ILE C OXT sing N N 272 ILE CB CG1 sing N N 273 ILE CB CG2 sing N N 274 ILE CB HB sing N N 275 ILE CG1 CD1 sing N N 276 ILE CG1 HG12 sing N N 277 ILE CG1 HG13 sing N N 278 ILE CG2 HG21 sing N N 279 ILE CG2 HG22 sing N N 280 ILE CG2 HG23 sing N N 281 ILE CD1 HD11 sing N N 282 ILE CD1 HD12 sing N N 283 ILE CD1 HD13 sing N N 284 ILE OXT HXT sing N N 285 LEU N CA sing N N 286 LEU N H sing N N 287 LEU N H2 sing N N 288 LEU CA C sing N N 289 LEU CA CB sing N N 290 LEU CA HA sing N N 291 LEU C O doub N N 292 LEU C OXT sing N N 293 LEU CB CG sing N N 294 LEU CB HB2 sing N N 295 LEU CB HB3 sing N N 296 LEU CG CD1 sing N N 297 LEU CG CD2 sing N N 298 LEU CG HG sing N N 299 LEU CD1 HD11 sing N N 300 LEU CD1 HD12 sing N N 301 LEU CD1 HD13 sing N N 302 LEU CD2 HD21 sing N N 303 LEU CD2 HD22 sing N N 304 LEU CD2 HD23 sing N N 305 LEU OXT HXT sing N N 306 LYS N CA sing N N 307 LYS N H sing N N 308 LYS N H2 sing N N 309 LYS CA C sing N N 310 LYS CA CB sing N N 311 LYS CA HA sing N N 312 LYS C O doub N N 313 LYS C OXT sing N N 314 LYS CB CG sing N N 315 LYS CB HB2 sing N N 316 LYS CB HB3 sing N N 317 LYS CG CD sing N N 318 LYS CG HG2 sing N N 319 LYS CG HG3 sing N N 320 LYS CD CE sing N N 321 LYS CD HD2 sing N N 322 LYS CD HD3 sing N N 323 LYS CE NZ sing N N 324 LYS CE HE2 sing N N 325 LYS CE HE3 sing N N 326 LYS NZ HZ1 sing N N 327 LYS NZ HZ2 sing N N 328 LYS NZ HZ3 sing N N 329 LYS OXT HXT sing N N 330 MET N CA sing N N 331 MET N H sing N N 332 MET N H2 sing N N 333 MET CA C sing N N 334 MET CA CB sing N N 335 MET CA HA sing N N 336 MET C O doub N N 337 MET C OXT sing N N 338 MET CB CG sing N N 339 MET CB HB2 sing N N 340 MET CB HB3 sing N N 341 MET CG SD sing N N 342 MET CG HG2 sing N N 343 MET CG HG3 sing N N 344 MET SD CE sing N N 345 MET CE HE1 sing N N 346 MET CE HE2 sing N N 347 MET CE HE3 sing N N 348 MET OXT HXT sing N N 349 PHE N CA sing N N 350 PHE N H sing N N 351 PHE N H2 sing N N 352 PHE CA C sing N N 353 PHE CA CB sing N N 354 PHE CA HA sing N N 355 PHE C O doub N N 356 PHE C OXT sing N N 357 PHE CB CG sing N N 358 PHE CB HB2 sing N N 359 PHE CB HB3 sing N N 360 PHE CG CD1 doub Y N 361 PHE CG CD2 sing Y N 362 PHE CD1 CE1 sing Y N 363 PHE CD1 HD1 sing N N 364 PHE CD2 CE2 doub Y N 365 PHE CD2 HD2 sing N N 366 PHE CE1 CZ doub Y N 367 PHE CE1 HE1 sing N N 368 PHE CE2 CZ sing Y N 369 PHE CE2 HE2 sing N N 370 PHE CZ HZ sing N N 371 PHE OXT HXT sing N N 372 PRO N CA sing N N 373 PRO N CD sing N N 374 PRO N H sing N N 375 PRO CA C sing N N 376 PRO CA CB sing N N 377 PRO CA HA sing N N 378 PRO C O doub N N 379 PRO C OXT sing N N 380 PRO CB CG sing N N 381 PRO CB HB2 sing N N 382 PRO CB HB3 sing N N 383 PRO CG CD sing N N 384 PRO CG HG2 sing N N 385 PRO CG HG3 sing N N 386 PRO CD HD2 sing N N 387 PRO CD HD3 sing N N 388 PRO OXT HXT sing N N 389 SER N CA sing N N 390 SER N H sing N N 391 SER N H2 sing N N 392 SER CA C sing N N 393 SER CA CB sing N N 394 SER CA HA sing N N 395 SER C O doub N N 396 SER C OXT sing N N 397 SER CB OG sing N N 398 SER CB HB2 sing N N 399 SER CB HB3 sing N N 400 SER OG HG sing N N 401 SER OXT HXT sing N N 402 SFG N CA sing N N 403 SFG N HN1 sing N N 404 SFG N HN2 sing N N 405 SFG CA C sing N N 406 SFG CA CB sing N N 407 SFG CA HA sing N N 408 SFG C O doub N N 409 SFG C OXT sing N N 410 SFG OXT HXT sing N N 411 SFG CB CG sing N N 412 SFG CB HB1 sing N N 413 SFG CB HB2 sing N N 414 SFG CG CD sing N N 415 SFG CG HG1 sing N N 416 SFG CG HG2 sing N N 417 SFG CD NE sing N N 418 SFG CD "C5'" sing N N 419 SFG CD HD sing N N 420 SFG NE HNE1 sing N N 421 SFG NE HNE2 sing N N 422 SFG "C5'" "C4'" sing N N 423 SFG "C5'" "H5'1" sing N N 424 SFG "C5'" "H5'2" sing N N 425 SFG "C4'" "O4'" sing N N 426 SFG "C4'" "C3'" sing N N 427 SFG "C4'" "H4'" sing N N 428 SFG "O4'" "C1'" sing N N 429 SFG "C3'" "O3'" sing N N 430 SFG "C3'" "C2'" sing N N 431 SFG "C3'" "H3'" sing N N 432 SFG "O3'" "HO3'" sing N N 433 SFG "C2'" "O2'" sing N N 434 SFG "C2'" "C1'" sing N N 435 SFG "C2'" "H2'" sing N N 436 SFG "O2'" "HO2'" sing N N 437 SFG "C1'" N9 sing N N 438 SFG "C1'" "H1'" sing N N 439 SFG N9 C8 sing Y N 440 SFG N9 C4 sing Y N 441 SFG C8 N7 doub Y N 442 SFG C8 H8 sing N N 443 SFG N7 C5 sing Y N 444 SFG C5 C6 sing Y N 445 SFG C5 C4 doub Y N 446 SFG C6 N6 sing N N 447 SFG C6 N1 doub Y N 448 SFG N6 HN61 sing N N 449 SFG N6 HN62 sing N N 450 SFG N1 C2 sing Y N 451 SFG C2 N3 doub Y N 452 SFG C2 H2 sing N N 453 SFG N3 C4 sing Y N 454 THR N CA sing N N 455 THR N H sing N N 456 THR N H2 sing N N 457 THR CA C sing N N 458 THR CA CB sing N N 459 THR CA HA sing N N 460 THR C O doub N N 461 THR C OXT sing N N 462 THR CB OG1 sing N N 463 THR CB CG2 sing N N 464 THR CB HB sing N N 465 THR OG1 HG1 sing N N 466 THR CG2 HG21 sing N N 467 THR CG2 HG22 sing N N 468 THR CG2 HG23 sing N N 469 THR OXT HXT sing N N 470 TRP N CA sing N N 471 TRP N H sing N N 472 TRP N H2 sing N N 473 TRP CA C sing N N 474 TRP CA CB sing N N 475 TRP CA HA sing N N 476 TRP C O doub N N 477 TRP C OXT sing N N 478 TRP CB CG sing N N 479 TRP CB HB2 sing N N 480 TRP CB HB3 sing N N 481 TRP CG CD1 doub Y N 482 TRP CG CD2 sing Y N 483 TRP CD1 NE1 sing Y N 484 TRP CD1 HD1 sing N N 485 TRP CD2 CE2 doub Y N 486 TRP CD2 CE3 sing Y N 487 TRP NE1 CE2 sing Y N 488 TRP NE1 HE1 sing N N 489 TRP CE2 CZ2 sing Y N 490 TRP CE3 CZ3 doub Y N 491 TRP CE3 HE3 sing N N 492 TRP CZ2 CH2 doub Y N 493 TRP CZ2 HZ2 sing N N 494 TRP CZ3 CH2 sing Y N 495 TRP CZ3 HZ3 sing N N 496 TRP CH2 HH2 sing N N 497 TRP OXT HXT sing N N 498 TYR N CA sing N N 499 TYR N H sing N N 500 TYR N H2 sing N N 501 TYR CA C sing N N 502 TYR CA CB sing N N 503 TYR CA HA sing N N 504 TYR C O doub N N 505 TYR C OXT sing N N 506 TYR CB CG sing N N 507 TYR CB HB2 sing N N 508 TYR CB HB3 sing N N 509 TYR CG CD1 doub Y N 510 TYR CG CD2 sing Y N 511 TYR CD1 CE1 sing Y N 512 TYR CD1 HD1 sing N N 513 TYR CD2 CE2 doub Y N 514 TYR CD2 HD2 sing N N 515 TYR CE1 CZ doub Y N 516 TYR CE1 HE1 sing N N 517 TYR CE2 CZ sing Y N 518 TYR CE2 HE2 sing N N 519 TYR CZ OH sing N N 520 TYR OH HH sing N N 521 TYR OXT HXT sing N N 522 U OP3 P sing N N 523 U OP3 HOP3 sing N N 524 U P OP1 doub N N 525 U P OP2 sing N N 526 U P "O5'" sing N N 527 U OP2 HOP2 sing N N 528 U "O5'" "C5'" sing N N 529 U "C5'" "C4'" sing N N 530 U "C5'" "H5'" sing N N 531 U "C5'" "H5''" sing N N 532 U "C4'" "O4'" sing N N 533 U "C4'" "C3'" sing N N 534 U "C4'" "H4'" sing N N 535 U "O4'" "C1'" sing N N 536 U "C3'" "O3'" sing N N 537 U "C3'" "C2'" sing N N 538 U "C3'" "H3'" sing N N 539 U "O3'" "HO3'" sing N N 540 U "C2'" "O2'" sing N N 541 U "C2'" "C1'" sing N N 542 U "C2'" "H2'" sing N N 543 U "O2'" "HO2'" sing N N 544 U "C1'" N1 sing N N 545 U "C1'" "H1'" sing N N 546 U N1 C2 sing N N 547 U N1 C6 sing N N 548 U C2 O2 doub N N 549 U C2 N3 sing N N 550 U N3 C4 sing N N 551 U N3 H3 sing N N 552 U C4 O4 doub N N 553 U C4 C5 sing N N 554 U C5 C6 doub N N 555 U C5 H5 sing N N 556 U C6 H6 sing N N 557 VAL N CA sing N N 558 VAL N H sing N N 559 VAL N H2 sing N N 560 VAL CA C sing N N 561 VAL CA CB sing N N 562 VAL CA HA sing N N 563 VAL C O doub N N 564 VAL C OXT sing N N 565 VAL CB CG1 sing N N 566 VAL CB CG2 sing N N 567 VAL CB HB sing N N 568 VAL CG1 HG11 sing N N 569 VAL CG1 HG12 sing N N 570 VAL CG1 HG13 sing N N 571 VAL CG2 HG21 sing N N 572 VAL CG2 HG22 sing N N 573 VAL CG2 HG23 sing N N 574 VAL OXT HXT sing N N 575 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 4YVJ 'double helix' 4YVJ 'a-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 C G 2 1_555 C C 69 1_555 0.033 -0.705 -1.950 -4.514 37.736 -9.207 1 C_G2:C71_C C 2 ? C 71 ? 22 1 1 C G 3 1_555 C C 68 1_555 -0.207 -0.089 0.032 -8.664 -16.750 -1.286 2 C_G3:C70_C C 3 ? C 70 ? 19 1 1 C G 4 1_555 C C 67 1_555 -0.204 -0.125 -0.438 -19.382 -9.677 -7.584 3 C_G4:C69_C C 4 ? C 69 ? 19 1 1 C A 5 1_555 C U 66 1_555 0.182 0.030 0.206 0.107 -8.815 6.384 4 C_A5:U68_C C 5 ? C 68 ? 20 1 1 C G 6 1_555 C C 65 1_555 -0.145 -0.131 0.470 -6.903 -19.046 2.295 5 C_G6:C67_C C 6 ? C 67 ? 19 1 1 C G 7 1_555 C C 64 1_555 -0.268 -0.145 0.695 -4.321 -15.197 3.707 6 C_G7:C66_C C 7 ? C 66 ? 19 1 1 C G 47 1_555 C C 63 1_555 -0.638 0.052 -0.223 -8.537 -4.663 6.899 7 C_G49:C65_C C 49 ? C 65 ? 19 1 1 C G 48 1_555 C C 62 1_555 -0.514 -0.219 -0.387 -9.082 -5.132 2.984 8 C_G50:C64_C C 50 ? C 64 ? 19 1 1 C A 49 1_555 C U 61 1_555 0.146 -0.279 -0.392 -6.801 -13.142 0.972 9 C_A51:U63_C C 51 ? C 63 ? 20 1 1 C G 50 1_555 C C 60 1_555 -0.515 -0.318 0.006 -3.560 -10.783 -1.970 10 C_G52:C62_C C 52 ? C 62 ? 19 1 1 C G 51 1_555 C C 59 1_555 0.050 -0.051 0.014 -8.798 -10.994 2.646 11 C_G53:C61_C C 53 ? C 61 ? 19 1 1 C U 52 1_555 C A 56 1_555 4.167 -1.704 0.343 -8.097 7.374 -101.877 12 C_U54:A58_C C 54 ? C 58 ? 24 4 1 C U 53 1_555 C G 17 1_555 0.458 -5.604 0.086 24.642 4.142 -92.751 13 C_U55:G18_C C 55 ? C 18 ? ? 2 1 C A 37 1_555 C C 31 1_555 -2.072 -0.753 0.656 6.773 -13.693 -17.072 14 C_A38:C32_C C 38 ? C 32 ? ? 1 1 C U 38 1_555 C A 30 1_555 -0.515 0.063 0.058 0.000 -20.636 -10.092 15 C_U39:A31_C C 39 ? C 31 ? 20 1 1 C C 39 1_555 C G 29 1_555 -0.031 0.007 0.391 6.913 -10.203 -5.217 16 C_C40:G30_C C 40 ? C 30 ? 19 1 1 C C 40 1_555 C G 28 1_555 0.253 -0.039 -0.048 1.943 -8.064 0.512 17 C_C41:G29_C C 41 ? C 29 ? 19 1 1 C G 41 1_555 C C 27 1_555 -0.285 -0.185 0.293 1.119 -13.080 0.902 18 C_G42:C28_C C 42 ? C 28 ? 19 1 1 C C 42 1_555 C G 26 1_555 0.050 -0.102 0.678 -8.275 -19.603 0.783 19 C_C43:G27_C C 43 ? C 27 ? 19 1 1 C U 43 1_555 C G 25 1_555 2.446 -0.514 0.327 -21.683 -21.405 -12.919 20 C_U44:G26_C C 44 ? C 26 ? 28 1 1 C G 10 1_555 C C 24 1_555 -0.346 -0.079 -0.513 -11.940 -12.409 7.508 21 C_G10:C25_C C 10 ? C 25 ? 19 1 1 C U 11 1_555 C A 23 1_555 -0.082 0.021 0.186 -7.093 -18.426 1.736 22 C_U11:A24_C C 11 ? C 24 ? 20 1 1 C C 12 1_555 C G 22 1_555 0.248 -0.298 -0.300 -1.889 -9.108 2.479 23 C_C12:G23_C C 12 ? C 23 ? 19 1 1 C U 13 1_555 C G 21 1_555 2.302 -0.518 -0.457 5.693 -6.945 5.130 24 C_U13:G22_C C 13 ? C 22 ? 28 1 1 C A 14 1_555 C U 8 1_555 -4.300 -1.888 0.652 7.680 20.435 -96.383 25 C_A14:U8_C C 14 ? C 8 ? 24 4 1 C A 15 1_555 C U 46 1_555 0.067 1.056 -0.416 1.308 -0.750 173.139 26 C_A15:U48_C C 15 ? C 48 ? 21 2 1 C G 18 1_555 C C 54 1_555 -0.018 -0.142 0.116 -19.963 -23.421 -2.630 27 C_G19:C56_C C 19 ? C 56 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 C G 2 1_555 C C 69 1_555 C G 3 1_555 C C 68 1_555 -0.845 -1.897 4.446 -8.559 -16.264 36.913 -0.027 -0.204 4.905 -23.953 12.606 41.093 1 CC_G2G3:C70C71_CC C 2 ? C 71 ? C 3 ? C 70 ? 1 C G 3 1_555 C C 68 1_555 C G 4 1_555 C C 67 1_555 -0.407 -1.866 3.573 3.456 4.280 32.502 -4.054 1.335 3.249 7.580 -6.120 32.951 2 CC_G3G4:C69C70_CC C 3 ? C 70 ? C 4 ? C 69 ? 1 C G 4 1_555 C C 67 1_555 C A 5 1_555 C U 66 1_555 1.276 -1.837 2.750 0.933 -3.845 35.302 -2.519 -1.973 2.959 -6.316 -1.533 35.516 3 CC_G4A5:U68C69_CC C 4 ? C 69 ? C 5 ? C 68 ? 1 C A 5 1_555 C U 66 1_555 C G 6 1_555 C C 65 1_555 0.312 -2.104 3.294 4.960 7.458 24.899 -6.435 0.539 2.579 16.625 -11.057 26.437 4 CC_A5G6:C67U68_CC C 5 ? C 68 ? C 6 ? C 67 ? 1 C G 6 1_555 C C 65 1_555 C G 7 1_555 C C 64 1_555 -0.136 -1.334 3.061 0.675 5.155 36.011 -2.789 0.303 2.846 8.285 -1.086 36.372 5 CC_G6G7:C66C67_CC C 6 ? C 67 ? C 7 ? C 66 ? 1 C G 7 1_555 C C 64 1_555 C G 47 1_555 C C 63 1_555 -1.450 -1.583 3.026 0.611 8.312 42.272 -2.877 2.029 2.662 11.392 -0.838 43.049 6 CC_G7G49:C65C66_CC C 7 ? C 66 ? C 49 ? C 65 ? 1 C G 47 1_555 C C 63 1_555 C G 48 1_555 C C 62 1_555 -0.360 -1.993 3.268 0.525 3.693 31.710 -4.270 0.746 3.016 6.728 -0.957 31.923 7 CC_G49G50:C64C65_CC C 49 ? C 65 ? C 50 ? C 64 ? 1 C G 48 1_555 C C 62 1_555 C A 49 1_555 C U 61 1_555 -0.283 -1.420 3.296 2.168 4.921 33.710 -3.180 0.818 3.041 8.419 -3.709 34.124 8 CC_G50A51:U63C64_CC C 50 ? C 64 ? C 51 ? C 63 ? 1 C A 49 1_555 C U 61 1_555 C G 50 1_555 C C 60 1_555 0.671 -1.752 3.090 -2.193 6.659 25.781 -5.303 -1.950 2.501 14.584 4.804 26.701 9 CC_A51G52:C62U63_CC C 51 ? C 63 ? C 52 ? C 62 ? 1 C G 50 1_555 C C 60 1_555 C G 51 1_555 C C 59 1_555 1.268 -1.945 3.261 5.700 6.209 35.801 -3.913 -1.250 3.052 9.931 -9.117 36.748 10 CC_G52G53:C61C62_CC C 52 ? C 62 ? C 53 ? C 61 ? 1 C G 51 1_555 C C 59 1_555 C U 52 1_555 C A 56 1_555 -2.472 -2.273 3.223 2.638 0.791 88.053 -1.651 1.833 3.147 0.569 -1.897 88.087 11 CC_G53U54:A58C61_CC C 53 ? C 61 ? C 54 ? C 58 ? 1 C U 52 1_555 C A 56 1_555 C U 53 1_555 C G 17 1_555 2.364 -2.037 3.047 9.999 3.598 43.944 -2.971 -2.196 3.313 4.727 -13.134 45.149 12 CC_U54U55:G18A58_CC C 54 ? C 58 ? C 55 ? C 18 ? 1 C A 37 1_555 C C 31 1_555 C U 38 1_555 C A 30 1_555 -0.169 -2.119 3.690 3.416 2.266 29.008 -4.729 1.146 3.476 4.496 -6.776 29.290 13 CC_A38U39:A31C32_CC C 38 ? C 32 ? C 39 ? C 31 ? 1 C U 38 1_555 C A 30 1_555 C C 39 1_555 C G 29 1_555 0.192 -2.374 3.191 -7.632 -0.913 32.718 -3.962 -1.557 3.132 -1.594 13.319 33.585 14 CC_U39C40:G30A31_CC C 39 ? C 31 ? C 40 ? C 30 ? 1 C C 39 1_555 C G 29 1_555 C C 40 1_555 C G 28 1_555 -0.047 -2.289 3.323 0.688 0.296 31.109 -4.325 0.221 3.300 0.551 -1.282 31.118 15 CC_C40C41:G29G30_CC C 40 ? C 30 ? C 41 ? C 29 ? 1 C C 40 1_555 C G 28 1_555 C G 41 1_555 C C 27 1_555 -0.607 -1.811 3.164 -2.783 6.833 25.613 -5.554 0.657 2.650 15.020 6.118 26.637 16 CC_C41G42:C28G29_CC C 41 ? C 29 ? C 42 ? C 28 ? 1 C G 41 1_555 C C 27 1_555 C C 42 1_555 C G 26 1_555 0.136 -1.545 3.424 -0.957 -0.672 38.691 -2.244 -0.328 3.445 -1.015 1.444 38.708 17 CC_G42C43:G27C28_CC C 42 ? C 28 ? C 43 ? C 27 ? 1 C C 42 1_555 C G 26 1_555 C U 43 1_555 C G 25 1_555 -0.357 -1.247 3.518 9.764 7.475 50.468 -1.951 1.093 3.199 8.621 -11.260 51.849 18 CC_C43U44:G26G27_CC C 43 ? C 27 ? C 44 ? C 26 ? 1 C U 43 1_555 C G 25 1_555 C G 10 1_555 C C 24 1_555 -3.050 -2.027 3.036 19.340 14.813 50.524 -2.767 4.044 1.281 16.314 -21.300 55.741 19 CC_U44G10:C25G26_CC C 44 ? C 26 ? C 10 ? C 25 ? 1 C G 10 1_555 C C 24 1_555 C U 11 1_555 C A 23 1_555 -0.915 -1.510 3.118 -8.682 4.934 31.868 -3.415 0.213 2.996 8.723 15.347 33.357 20 CC_G10U11:A24C25_CC C 10 ? C 25 ? C 11 ? C 24 ? 1 C U 11 1_555 C A 23 1_555 C C 12 1_555 C G 22 1_555 -0.158 -1.211 3.119 4.017 1.180 35.257 -2.150 0.815 3.042 1.940 -6.602 35.497 21 CC_U11C12:G23A24_CC C 11 ? C 24 ? C 12 ? C 23 ? 1 C C 12 1_555 C G 22 1_555 C U 13 1_555 C G 21 1_555 0.890 -1.498 3.134 4.491 5.703 36.490 -3.063 -0.833 2.960 8.998 -7.086 37.181 22 CC_C12U13:G22G23_CC C 12 ? C 23 ? C 13 ? C 22 ? 1 C U 13 1_555 C G 21 1_555 C A 14 1_555 C U 8 1_555 -0.611 -1.256 3.250 1.745 4.204 54.693 -1.608 0.765 3.134 4.567 -1.896 54.868 23 CC_U13A14:U8G22_CC C 13 ? C 22 ? C 14 ? C 8 ? 1 C A 14 1_555 C U 8 1_555 C A 15 1_555 C U 46 1_555 1.604 -2.859 3.591 -1.644 15.051 -78.364 1.759 1.201 4.027 -11.809 -1.290 -79.582 24 CC_A14A15:U48U8_CC C 14 ? C 8 ? C 15 ? C 48 ? # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name SINEFUNGIN _pdbx_entity_nonpoly.comp_id SFG # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 4YVI _pdbx_initial_refinement_model.details ? #