HEADER SUGAR BINDING PROTEIN 20-MAR-15 4YW6 TITLE STRUCTURAL INSIGHT INTO DIVALENT GALACTOSIDE BINDING TO PSEUDOMONAS TITLE 2 AERUGINOSA LECTIN LECA COMPND MOL_ID: 1; COMPND 2 MOLECULE: PA-I GALACTOPHILIC LECTIN; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: PA-IL,GALACTOSE-BINDING LECTIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; SOURCE 3 ORGANISM_TAXID: 287; SOURCE 4 GENE: LECA, PA1L, PA2570; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS GALACTOSIDES, LECTINS, SUGAR BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR R.VISINI,X.JIN,G.MICHAUD,M.BERGMANN,E.GILLON,A.IMBERTY,A.STOCKER, AUTHOR 2 T.DARBRE,R.PIETERS,J.-L.REYMOND REVDAT 3 10-JAN-24 4YW6 1 LINK REVDAT 2 02-DEC-15 4YW6 1 JRNL REVDAT 1 09-SEP-15 4YW6 0 JRNL AUTH R.VISINI,X.JIN,M.BERGMANN,G.MICHAUD,F.PERTICI,O.FU,A.PUKIN, JRNL AUTH 2 T.R.BRANSON,D.M.THIES-WEESIE,J.KEMMINK,E.GILLON,A.IMBERTY, JRNL AUTH 3 A.STOCKER,T.DARBRE,R.J.PIETERS,J.L.REYMOND JRNL TITL STRUCTURAL INSIGHT INTO MULTIVALENT GALACTOSIDE BINDING TO JRNL TITL 2 PSEUDOMONAS AERUGINOSA LECTIN LECA. JRNL REF ACS CHEM.BIOL. V. 10 2455 2015 JRNL REFN ESSN 1554-8937 JRNL PMID 26295304 JRNL DOI 10.1021/ACSCHEMBIO.5B00302 REMARK 2 REMARK 2 RESOLUTION. 1.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 23.93 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.960 REMARK 3 COMPLETENESS FOR RANGE (%) : 83.3 REMARK 3 NUMBER OF REFLECTIONS : 127114 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.186 REMARK 3 R VALUE (WORKING SET) : 0.186 REMARK 3 FREE R VALUE : 0.206 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 1.540 REMARK 3 FREE R VALUE TEST SET COUNT : 1961 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 23.9379 - 3.3713 0.90 9627 165 0.1614 0.1743 REMARK 3 2 3.3713 - 2.6770 0.98 10199 162 0.1726 0.2006 REMARK 3 3 2.6770 - 2.3390 0.97 10169 149 0.1768 0.1933 REMARK 3 4 2.3390 - 2.1253 0.81 8678 136 0.1864 0.2241 REMARK 3 5 2.1253 - 1.9730 0.78 8422 124 0.2037 0.2342 REMARK 3 6 1.9730 - 1.8567 0.52 5551 92 0.2252 0.2035 REMARK 3 7 1.8567 - 1.7638 0.96 10265 153 0.1542 0.1583 REMARK 3 8 1.7638 - 1.6870 0.95 10107 161 0.1649 0.1964 REMARK 3 9 1.6870 - 1.6221 0.95 10309 153 0.1446 0.1731 REMARK 3 10 1.6221 - 1.5661 0.95 10109 159 0.1623 0.2140 REMARK 3 11 1.5661 - 1.5172 0.71 7558 129 0.2791 0.2425 REMARK 3 12 1.5172 - 1.4738 0.67 7286 107 0.2830 0.3138 REMARK 3 13 1.4738 - 1.4350 0.67 7099 120 0.4110 0.4151 REMARK 3 14 1.4350 - 1.4000 0.91 9774 151 0.2134 0.2770 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.130 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.430 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 10.45 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 18.98 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 3847 REMARK 3 ANGLE : 1.379 5263 REMARK 3 CHIRALITY : 0.082 569 REMARK 3 PLANARITY : 0.007 690 REMARK 3 DIHEDRAL : 13.462 1311 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4YW6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 20-MAR-15. REMARK 100 THE DEPOSITION ID IS D_1000208179. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-OCT-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06DA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00003 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.21 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 129508 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.400 REMARK 200 RESOLUTION RANGE LOW (A) : 67.032 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 84.9 REMARK 200 DATA REDUNDANCY : 2.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.05800 REMARK 200 FOR THE DATA SET : 7.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.48 REMARK 200 COMPLETENESS FOR SHELL (%) : 81.1 REMARK 200 DATA REDUNDANCY IN SHELL : 2.90 REMARK 200 R MERGE FOR SHELL (I) : 0.26700 REMARK 200 R SYM FOR SHELL (I) : 0.26700 REMARK 200 FOR SHELL : 1.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1OKO REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 68.58 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.91 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.5M AMMONIUM SULFATE, PH 4.6, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6140 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20020 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -3.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLN A 120 NE2 GLN C 120 2.09 REMARK 500 O HOH C 1028 O HOH C 1070 2.10 REMARK 500 O HOH C 1030 O HOH C 1153 2.11 REMARK 500 O HOH C 1068 O HOH C 1140 2.14 REMARK 500 O HOH C 1140 O HOH D 1074 2.16 REMARK 500 O HOH C 1021 O HOH C 1022 2.17 REMARK 500 O HOH B 1029 O HOH B 1183 2.17 REMARK 500 O HOH D 1156 O HOH D 1220 2.18 REMARK 500 O HOH B 1103 O HOH B 1166 2.18 REMARK 500 O HOH A 1173 O HOH A 1213 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 1011 O HOH D 1023 1566 2.08 REMARK 500 O HOH A 1022 O HOH D 1029 1666 2.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 78 -130.84 57.70 REMARK 500 ASN B 78 -130.79 57.31 REMARK 500 ASN C 78 -133.05 58.87 REMARK 500 ASN D 78 -131.13 57.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1217 DISTANCE = 6.06 ANGSTROMS REMARK 525 HOH B1220 DISTANCE = 6.16 ANGSTROMS REMARK 525 HOH B1221 DISTANCE = 6.78 ANGSTROMS REMARK 525 HOH B1222 DISTANCE = 7.10 ANGSTROMS REMARK 525 HOH B1223 DISTANCE = 7.21 ANGSTROMS REMARK 525 HOH C1227 DISTANCE = 5.98 ANGSTROMS REMARK 525 HOH C1228 DISTANCE = 6.15 ANGSTROMS REMARK 525 HOH C1229 DISTANCE = 7.07 ANGSTROMS REMARK 525 HOH C1230 DISTANCE = 7.99 ANGSTROMS REMARK 525 HOH C1231 DISTANCE = 8.61 ANGSTROMS REMARK 525 HOH D1223 DISTANCE = 6.50 ANGSTROMS REMARK 525 HOH D1224 DISTANCE = 6.85 ANGSTROMS REMARK 525 HOH D1225 DISTANCE = 7.32 ANGSTROMS REMARK 525 HOH D1226 DISTANCE = 7.90 ANGSTROMS REMARK 525 HOH D1227 DISTANCE = 8.62 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 901 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TYR A 36 O REMARK 620 2 ASP A 100 OD2 104.5 REMARK 620 3 THR A 104 O 162.8 88.7 REMARK 620 4 ASN A 107 OD1 84.6 150.2 78.5 REMARK 620 5 ASN A 108 OD1 77.5 76.6 95.5 78.0 REMARK 620 6 G0P A 902 O41 79.6 75.0 115.0 134.8 137.3 REMARK 620 7 G0P A 902 O43 91.8 132.0 87.1 74.7 151.4 63.9 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 901 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TYR B 36 O REMARK 620 2 ASP B 100 OD2 104.8 REMARK 620 3 THR B 104 O 162.0 89.5 REMARK 620 4 ASN B 107 OD1 84.8 150.2 77.5 REMARK 620 5 ASN B 108 OD1 78.4 76.7 94.7 77.8 REMARK 620 6 G0P B 902 O43 92.4 131.0 86.1 75.4 152.3 REMARK 620 7 G0P B 902 O41 79.6 74.7 115.3 135.1 137.7 63.7 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA C 901 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TYR C 36 O REMARK 620 2 ASP C 100 OD2 105.0 REMARK 620 3 THR C 104 O 163.6 87.9 REMARK 620 4 ASN C 107 OD1 84.8 149.6 79.0 REMARK 620 5 ASN C 108 OD1 78.7 75.9 95.1 78.0 REMARK 620 6 G0P C 902 O41 79.0 74.3 114.9 136.2 136.3 REMARK 620 7 G0P C 902 O43 91.6 130.8 87.3 76.3 153.2 63.8 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA D 901 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TYR D 36 O REMARK 620 2 ASP D 100 OD2 104.8 REMARK 620 3 THR D 104 O 163.7 88.0 REMARK 620 4 ASN D 107 OD1 84.6 150.5 79.4 REMARK 620 5 ASN D 108 OD1 78.4 76.6 95.4 78.2 REMARK 620 6 G0P D 902 O41 79.3 74.4 114.3 135.1 137.1 REMARK 620 7 G0P D 902 O43 91.8 130.4 87.1 75.8 153.0 63.2 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 901 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue G0P A 902 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA B 901 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue G0P B 902 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA C 901 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue G0P C 902 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA D 901 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue G0P D 902 DBREF 4YW6 A 1 121 UNP Q05097 PA1L_PSEAE 2 122 DBREF 4YW6 B 1 121 UNP Q05097 PA1L_PSEAE 2 122 DBREF 4YW6 C 1 121 UNP Q05097 PA1L_PSEAE 2 122 DBREF 4YW6 D 1 121 UNP Q05097 PA1L_PSEAE 2 122 SEQRES 1 A 121 ALA TRP LYS GLY GLU VAL LEU ALA ASN ASN GLU ALA GLY SEQRES 2 A 121 GLN VAL THR SER ILE ILE TYR ASN PRO GLY ASP VAL ILE SEQRES 3 A 121 THR ILE VAL ALA ALA GLY TRP ALA SER TYR GLY PRO THR SEQRES 4 A 121 GLN LYS TRP GLY PRO GLN GLY ASP ARG GLU HIS PRO ASP SEQRES 5 A 121 GLN GLY LEU ILE CYS HIS ASP ALA PHE CYS GLY ALA LEU SEQRES 6 A 121 VAL MET LYS ILE GLY ASN SER GLY THR ILE PRO VAL ASN SEQRES 7 A 121 THR GLY LEU PHE ARG TRP VAL ALA PRO ASN ASN VAL GLN SEQRES 8 A 121 GLY ALA ILE THR LEU ILE TYR ASN ASP VAL PRO GLY THR SEQRES 9 A 121 TYR GLY ASN ASN SER GLY SER PHE SER VAL ASN ILE GLY SEQRES 10 A 121 LYS ASP GLN SER SEQRES 1 B 121 ALA TRP LYS GLY GLU VAL LEU ALA ASN ASN GLU ALA GLY SEQRES 2 B 121 GLN VAL THR SER ILE ILE TYR ASN PRO GLY ASP VAL ILE SEQRES 3 B 121 THR ILE VAL ALA ALA GLY TRP ALA SER TYR GLY PRO THR SEQRES 4 B 121 GLN LYS TRP GLY PRO GLN GLY ASP ARG GLU HIS PRO ASP SEQRES 5 B 121 GLN GLY LEU ILE CYS HIS ASP ALA PHE CYS GLY ALA LEU SEQRES 6 B 121 VAL MET LYS ILE GLY ASN SER GLY THR ILE PRO VAL ASN SEQRES 7 B 121 THR GLY LEU PHE ARG TRP VAL ALA PRO ASN ASN VAL GLN SEQRES 8 B 121 GLY ALA ILE THR LEU ILE TYR ASN ASP VAL PRO GLY THR SEQRES 9 B 121 TYR GLY ASN ASN SER GLY SER PHE SER VAL ASN ILE GLY SEQRES 10 B 121 LYS ASP GLN SER SEQRES 1 C 121 ALA TRP LYS GLY GLU VAL LEU ALA ASN ASN GLU ALA GLY SEQRES 2 C 121 GLN VAL THR SER ILE ILE TYR ASN PRO GLY ASP VAL ILE SEQRES 3 C 121 THR ILE VAL ALA ALA GLY TRP ALA SER TYR GLY PRO THR SEQRES 4 C 121 GLN LYS TRP GLY PRO GLN GLY ASP ARG GLU HIS PRO ASP SEQRES 5 C 121 GLN GLY LEU ILE CYS HIS ASP ALA PHE CYS GLY ALA LEU SEQRES 6 C 121 VAL MET LYS ILE GLY ASN SER GLY THR ILE PRO VAL ASN SEQRES 7 C 121 THR GLY LEU PHE ARG TRP VAL ALA PRO ASN ASN VAL GLN SEQRES 8 C 121 GLY ALA ILE THR LEU ILE TYR ASN ASP VAL PRO GLY THR SEQRES 9 C 121 TYR GLY ASN ASN SER GLY SER PHE SER VAL ASN ILE GLY SEQRES 10 C 121 LYS ASP GLN SER SEQRES 1 D 121 ALA TRP LYS GLY GLU VAL LEU ALA ASN ASN GLU ALA GLY SEQRES 2 D 121 GLN VAL THR SER ILE ILE TYR ASN PRO GLY ASP VAL ILE SEQRES 3 D 121 THR ILE VAL ALA ALA GLY TRP ALA SER TYR GLY PRO THR SEQRES 4 D 121 GLN LYS TRP GLY PRO GLN GLY ASP ARG GLU HIS PRO ASP SEQRES 5 D 121 GLN GLY LEU ILE CYS HIS ASP ALA PHE CYS GLY ALA LEU SEQRES 6 D 121 VAL MET LYS ILE GLY ASN SER GLY THR ILE PRO VAL ASN SEQRES 7 D 121 THR GLY LEU PHE ARG TRP VAL ALA PRO ASN ASN VAL GLN SEQRES 8 D 121 GLY ALA ILE THR LEU ILE TYR ASN ASP VAL PRO GLY THR SEQRES 9 D 121 TYR GLY ASN ASN SER GLY SER PHE SER VAL ASN ILE GLY SEQRES 10 D 121 LYS ASP GLN SER HET CA A 901 1 HET G0P A 902 69 HET CA B 901 1 HET G0P B 902 69 HET CA C 901 1 HET G0P C 902 69 HET CA D 901 1 HET G0P D 902 69 HETNAM CA CALCIUM ION HETNAM G0P N-[(2S)-6-AMINO-1-OXO-1-(PYRROLIDIN-1-YL)HEXAN-2-YL]-4- HETNAM 2 G0P (BETA-D-GALACTOPYRANOSYLOXY)BENZAMIDE FORMUL 5 CA 4(CA 2+) FORMUL 6 G0P 4(C23 H35 N3 O8) FORMUL 13 HOH *898(H2 O) HELIX 1 AA1 THR A 104 ASN A 108 5 5 HELIX 2 AA2 THR B 104 ASN B 108 5 5 HELIX 3 AA3 THR C 104 ASN C 108 5 5 HELIX 4 AA4 THR D 104 ASN D 108 5 5 SHEET 1 AA1 4 TRP A 2 LEU A 7 0 SHEET 2 AA1 4 SER A 109 LYS A 118 -1 O VAL A 114 N GLY A 4 SHEET 3 AA1 4 ILE A 26 SER A 35 -1 N SER A 35 O SER A 109 SHEET 4 AA1 4 GLY A 80 TRP A 84 -1 O TRP A 84 N ILE A 26 SHEET 1 AA2 4 GLN A 14 TYR A 20 0 SHEET 2 AA2 4 GLY A 92 TYR A 98 -1 O LEU A 96 N GLN A 14 SHEET 3 AA2 4 LEU A 65 ILE A 69 -1 N VAL A 66 O ILE A 97 SHEET 4 AA2 4 ILE A 75 PRO A 76 -1 O ILE A 75 N MET A 67 SHEET 1 AA3 4 TRP B 2 LEU B 7 0 SHEET 2 AA3 4 SER B 109 ASP B 119 -1 O VAL B 114 N GLY B 4 SHEET 3 AA3 4 VAL B 25 SER B 35 -1 N VAL B 25 O ASP B 119 SHEET 4 AA3 4 GLY B 80 TRP B 84 -1 O TRP B 84 N ILE B 26 SHEET 1 AA4 4 GLN B 14 TYR B 20 0 SHEET 2 AA4 4 GLY B 92 TYR B 98 -1 O LEU B 96 N GLN B 14 SHEET 3 AA4 4 LEU B 65 ILE B 69 -1 N VAL B 66 O ILE B 97 SHEET 4 AA4 4 ILE B 75 PRO B 76 -1 O ILE B 75 N MET B 67 SHEET 1 AA5 4 TRP C 2 LEU C 7 0 SHEET 2 AA5 4 SER C 109 LYS C 118 -1 O VAL C 114 N GLY C 4 SHEET 3 AA5 4 ILE C 26 SER C 35 -1 N ALA C 31 O SER C 113 SHEET 4 AA5 4 GLY C 80 TRP C 84 -1 O TRP C 84 N ILE C 26 SHEET 1 AA6 4 GLN C 14 TYR C 20 0 SHEET 2 AA6 4 GLY C 92 TYR C 98 -1 O LEU C 96 N GLN C 14 SHEET 3 AA6 4 LEU C 65 ILE C 69 -1 N VAL C 66 O ILE C 97 SHEET 4 AA6 4 ILE C 75 PRO C 76 -1 O ILE C 75 N MET C 67 SHEET 1 AA7 4 TRP D 2 LEU D 7 0 SHEET 2 AA7 4 SER D 109 LYS D 118 -1 O VAL D 114 N GLY D 4 SHEET 3 AA7 4 ILE D 26 SER D 35 -1 N ALA D 31 O SER D 113 SHEET 4 AA7 4 GLY D 80 TRP D 84 -1 O TRP D 84 N ILE D 26 SHEET 1 AA8 4 GLN D 14 TYR D 20 0 SHEET 2 AA8 4 GLY D 92 TYR D 98 -1 O LEU D 96 N GLN D 14 SHEET 3 AA8 4 LEU D 65 ILE D 69 -1 N VAL D 66 O ILE D 97 SHEET 4 AA8 4 ILE D 75 PRO D 76 -1 O ILE D 75 N MET D 67 LINK O TYR A 36 CA CA A 901 1555 1555 2.32 LINK OD2 ASP A 100 CA CA A 901 1555 1555 2.48 LINK O THR A 104 CA CA A 901 1555 1555 2.30 LINK OD1 ASN A 107 CA CA A 901 1555 1555 2.45 LINK OD1 ASN A 108 CA CA A 901 1555 1555 2.35 LINK CA CA A 901 O41 G0P A 902 1555 1555 2.48 LINK CA CA A 901 O43 G0P A 902 1555 1555 2.46 LINK O TYR B 36 CA CA B 901 1555 1555 2.33 LINK OD2 ASP B 100 CA CA B 901 1555 1555 2.50 LINK O THR B 104 CA CA B 901 1555 1555 2.34 LINK OD1 ASN B 107 CA CA B 901 1555 1555 2.46 LINK OD1 ASN B 108 CA CA B 901 1555 1555 2.32 LINK CA CA B 901 O43 G0P B 902 1555 1555 2.43 LINK CA CA B 901 O41 G0P B 902 1555 1555 2.45 LINK O TYR C 36 CA CA C 901 1555 1555 2.32 LINK OD2 ASP C 100 CA CA C 901 1555 1555 2.49 LINK O THR C 104 CA CA C 901 1555 1555 2.31 LINK OD1 ASN C 107 CA CA C 901 1555 1555 2.44 LINK OD1 ASN C 108 CA CA C 901 1555 1555 2.37 LINK CA CA C 901 O41 G0P C 902 1555 1555 2.46 LINK CA CA C 901 O43 G0P C 902 1555 1555 2.42 LINK O TYR D 36 CA CA D 901 1555 1555 2.32 LINK OD2 ASP D 100 CA CA D 901 1555 1555 2.48 LINK O THR D 104 CA CA D 901 1555 1555 2.29 LINK OD1 ASN D 107 CA CA D 901 1555 1555 2.44 LINK OD1 ASN D 108 CA CA D 901 1555 1555 2.36 LINK CA CA D 901 O41 G0P D 902 1555 1555 2.50 LINK CA CA D 901 O43 G0P D 902 1555 1555 2.44 SITE 1 AC1 6 TYR A 36 ASP A 100 THR A 104 ASN A 107 SITE 2 AC1 6 ASN A 108 G0P A 902 SITE 1 AC2 12 TYR A 36 HIS A 50 GLN A 53 ASP A 100 SITE 2 AC2 12 THR A 104 ASN A 107 CA A 901 HOH A1045 SITE 3 AC2 12 HOH A1048 HOH A1054 HOH A1060 HOH A1069 SITE 1 AC3 6 TYR B 36 ASP B 100 THR B 104 ASN B 107 SITE 2 AC3 6 ASN B 108 G0P B 902 SITE 1 AC4 13 TYR B 36 HIS B 50 GLN B 53 ASP B 100 SITE 2 AC4 13 THR B 104 ASN B 107 CA B 901 HOH B1035 SITE 3 AC4 13 HOH B1053 HOH B1066 HOH B1070 HOH B1072 SITE 4 AC4 13 HOH B1086 SITE 1 AC5 6 TYR C 36 ASP C 100 THR C 104 ASN C 107 SITE 2 AC5 6 ASN C 108 G0P C 902 SITE 1 AC6 13 TYR C 36 HIS C 50 GLN C 53 ASP C 100 SITE 2 AC6 13 THR C 104 ASN C 107 CA C 901 HOH C1032 SITE 3 AC6 13 HOH C1062 HOH C1071 HOH C1077 HOH C1078 SITE 4 AC6 13 HOH C1097 SITE 1 AC7 6 TYR D 36 ASP D 100 THR D 104 ASN D 107 SITE 2 AC7 6 ASN D 108 G0P D 902 SITE 1 AC8 13 TYR D 36 HIS D 50 GLN D 53 ASP D 100 SITE 2 AC8 13 THR D 104 ASN D 107 CA D 901 HOH D1032 SITE 3 AC8 13 HOH D1046 HOH D1061 HOH D1077 HOH D1079 SITE 4 AC8 13 HOH D1081 CRYST1 40.870 72.980 79.020 117.52 104.99 90.00 P 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024468 0.000000 0.007460 0.00000 SCALE2 0.000000 0.013702 0.007464 0.00000 SCALE3 0.000000 0.000000 0.014918 0.00000