data_4Z1R # _entry.id 4Z1R # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4Z1R pdb_00004z1r 10.2210/pdb4z1r/pdb WWPDB D_1000208457 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-11-18 2 'Structure model' 1 1 2020-03-25 3 'Structure model' 1 2 2020-04-22 4 'Structure model' 1 3 2024-01-10 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' pdbx_related_exp_data_set 2 3 'Structure model' pdbx_related_exp_data_set 3 4 'Structure model' chem_comp_atom 4 4 'Structure model' chem_comp_bond 5 4 'Structure model' database_2 6 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 4Z1R _pdbx_database_status.recvd_initial_deposition_date 2015-03-27 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Plonska-Brzezinska, M.E.' 1 'Czyrko, J.' 2 'Brus, D.M.' 3 'Imierska, M.' 4 'Brzezinski, K.' 5 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Rsc Adv' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2046-2069 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 5 _citation.language ? _citation.page_first 95443 _citation.page_last 95453 _citation.title 'Triple helical collagen-like peptide interactions with selected polyphenolic compounds.' _citation.year 2015 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1039/c5ra15469c _citation.pdbx_database_id_PubMed ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Plonska-Brzezinska, M.E.' 1 ? primary 'Bobrowska, D.M.' 2 ? primary 'Sharma, A.' 3 ? primary 'Rodziewicz, P.' 4 ? primary 'Tomczyk, M.' 5 ? primary 'Czyrko, J.' 6 ? primary 'Brzezinski, K.' 7 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'Collagen-like peptide' 2704.854 3 ? ? ? ? 2 water nat water 18.015 188 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code 'P(HYP)GP(HYP)GP(HYP)GP(HYP)GP(HYP)AP(HYP)GP(HYP)GP(HYP)GP(HYP)GP(HYP)G' _entity_poly.pdbx_seq_one_letter_code_can PPGPPGPPGPPGPPAPPGPPGPPGPPGPPG _entity_poly.pdbx_strand_id A,B,C _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 PRO n 1 2 HYP n 1 3 GLY n 1 4 PRO n 1 5 HYP n 1 6 GLY n 1 7 PRO n 1 8 HYP n 1 9 GLY n 1 10 PRO n 1 11 HYP n 1 12 GLY n 1 13 PRO n 1 14 HYP n 1 15 ALA n 1 16 PRO n 1 17 HYP n 1 18 GLY n 1 19 PRO n 1 20 HYP n 1 21 GLY n 1 22 PRO n 1 23 HYP n 1 24 GLY n 1 25 PRO n 1 26 HYP n 1 27 GLY n 1 28 PRO n 1 29 HYP n 1 30 GLY n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 30 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 HYP 'L-peptide linking' n 4-HYDROXYPROLINE HYDROXYPROLINE 'C5 H9 N O3' 131.130 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 PRO 1 1 1 PRO PRO A . n A 1 2 HYP 2 2 2 HYP HYP A . n A 1 3 GLY 3 3 3 GLY GLY A . n A 1 4 PRO 4 4 4 PRO PRO A . n A 1 5 HYP 5 5 5 HYP HYP A . n A 1 6 GLY 6 6 6 GLY GLY A . n A 1 7 PRO 7 7 7 PRO PRO A . n A 1 8 HYP 8 8 8 HYP HYP A . n A 1 9 GLY 9 9 9 GLY GLY A . n A 1 10 PRO 10 10 10 PRO PRO A . n A 1 11 HYP 11 11 11 HYP HYP A . n A 1 12 GLY 12 12 12 GLY GLY A . n A 1 13 PRO 13 13 13 PRO PRO A . n A 1 14 HYP 14 14 14 HYP HYP A . n A 1 15 ALA 15 15 15 ALA ALA A . n A 1 16 PRO 16 16 16 PRO PRO A . n A 1 17 HYP 17 17 17 HYP HYP A . n A 1 18 GLY 18 18 18 GLY GLY A . n A 1 19 PRO 19 19 19 PRO PRO A . n A 1 20 HYP 20 20 20 HYP HYP A . n A 1 21 GLY 21 21 21 GLY GLY A . n A 1 22 PRO 22 22 22 PRO PRO A . n A 1 23 HYP 23 23 23 HYP HYP A . n A 1 24 GLY 24 24 24 GLY GLY A . n A 1 25 PRO 25 25 25 PRO PRO A . n A 1 26 HYP 26 26 26 HYP HYP A . n A 1 27 GLY 27 27 27 GLY GLY A . n A 1 28 PRO 28 28 ? ? ? A . n A 1 29 HYP 29 29 ? ? ? A . n A 1 30 GLY 30 30 ? ? ? A . n B 1 1 PRO 1 31 ? ? ? B . n B 1 2 HYP 2 32 ? ? ? B . n B 1 3 GLY 3 33 33 GLY GLY B . n B 1 4 PRO 4 34 34 PRO PRO B . n B 1 5 HYP 5 35 35 HYP HYP B . n B 1 6 GLY 6 36 36 GLY GLY B . n B 1 7 PRO 7 37 37 PRO PRO B . n B 1 8 HYP 8 38 38 HYP HYP B . n B 1 9 GLY 9 39 39 GLY GLY B . n B 1 10 PRO 10 40 40 PRO PRO B . n B 1 11 HYP 11 41 41 HYP HYP B . n B 1 12 GLY 12 42 42 GLY GLY B . n B 1 13 PRO 13 43 43 PRO PRO B . n B 1 14 HYP 14 44 44 HYP HYP B . n B 1 15 ALA 15 45 45 ALA ALA B . n B 1 16 PRO 16 46 46 PRO PRO B . n B 1 17 HYP 17 47 47 HYP HYP B . n B 1 18 GLY 18 48 48 GLY GLY B . n B 1 19 PRO 19 49 49 PRO PRO B . n B 1 20 HYP 20 50 50 HYP HYP B . n B 1 21 GLY 21 51 51 GLY GLY B . n B 1 22 PRO 22 52 52 PRO PRO B . n B 1 23 HYP 23 53 53 HYP HYP B . n B 1 24 GLY 24 54 54 GLY GLY B . n B 1 25 PRO 25 55 55 PRO PRO B . n B 1 26 HYP 26 56 56 HYP HYP B . n B 1 27 GLY 27 57 57 GLY GLY B . n B 1 28 PRO 28 58 58 PRO PRO B . n B 1 29 HYP 29 59 ? ? ? B . n B 1 30 GLY 30 60 ? ? ? B . n C 1 1 PRO 1 61 ? ? ? C . n C 1 2 HYP 2 62 ? ? ? C . n C 1 3 GLY 3 63 63 GLY GLY C . n C 1 4 PRO 4 64 64 PRO PRO C . n C 1 5 HYP 5 65 65 HYP HYP C . n C 1 6 GLY 6 66 66 GLY GLY C . n C 1 7 PRO 7 67 67 PRO PRO C . n C 1 8 HYP 8 68 68 HYP HYP C . n C 1 9 GLY 9 69 69 GLY GLY C . n C 1 10 PRO 10 70 70 PRO PRO C . n C 1 11 HYP 11 71 71 HYP HYP C . n C 1 12 GLY 12 72 72 GLY GLY C . n C 1 13 PRO 13 73 73 PRO PRO C . n C 1 14 HYP 14 74 74 HYP HYP C . n C 1 15 ALA 15 75 75 ALA ALA C . n C 1 16 PRO 16 76 76 PRO PRO C . n C 1 17 HYP 17 77 77 HYP HYP C . n C 1 18 GLY 18 78 78 GLY GLY C . n C 1 19 PRO 19 79 79 PRO PRO C . n C 1 20 HYP 20 80 80 HYP HYP C . n C 1 21 GLY 21 81 81 GLY GLY C . n C 1 22 PRO 22 82 82 PRO PRO C . n C 1 23 HYP 23 83 83 HYP HYP C . n C 1 24 GLY 24 84 84 GLY GLY C . n C 1 25 PRO 25 85 85 PRO PRO C . n C 1 26 HYP 26 86 86 HYP HYP C . n C 1 27 GLY 27 87 87 GLY GLY C . n C 1 28 PRO 28 88 ? ? ? C . n C 1 29 HYP 29 89 ? ? ? C . n C 1 30 GLY 30 90 ? ? ? C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 HOH 1 101 164 HOH HOH A . D 2 HOH 2 102 125 HOH HOH A . D 2 HOH 3 103 159 HOH HOH A . D 2 HOH 4 104 39 HOH HOH A . D 2 HOH 5 105 174 HOH HOH A . D 2 HOH 6 106 79 HOH HOH A . D 2 HOH 7 107 24 HOH HOH A . D 2 HOH 8 108 84 HOH HOH A . D 2 HOH 9 109 36 HOH HOH A . D 2 HOH 10 110 17 HOH HOH A . D 2 HOH 11 111 78 HOH HOH A . D 2 HOH 12 112 163 HOH HOH A . D 2 HOH 13 113 16 HOH HOH A . D 2 HOH 14 114 15 HOH HOH A . D 2 HOH 15 115 57 HOH HOH A . D 2 HOH 16 116 25 HOH HOH A . D 2 HOH 17 117 10 HOH HOH A . D 2 HOH 18 118 14 HOH HOH A . D 2 HOH 19 119 149 HOH HOH A . D 2 HOH 20 120 55 HOH HOH A . D 2 HOH 21 121 80 HOH HOH A . D 2 HOH 22 122 160 HOH HOH A . D 2 HOH 23 123 185 HOH HOH A . D 2 HOH 24 124 82 HOH HOH A . D 2 HOH 25 125 63 HOH HOH A . D 2 HOH 26 126 186 HOH HOH A . D 2 HOH 27 127 42 HOH HOH A . D 2 HOH 28 128 38 HOH HOH A . D 2 HOH 29 129 47 HOH HOH A . D 2 HOH 30 130 32 HOH HOH A . D 2 HOH 31 131 140 HOH HOH A . D 2 HOH 32 132 158 HOH HOH A . D 2 HOH 33 133 167 HOH HOH A . D 2 HOH 34 134 147 HOH HOH A . D 2 HOH 35 135 143 HOH HOH A . D 2 HOH 36 136 152 HOH HOH A . D 2 HOH 37 137 61 HOH HOH A . D 2 HOH 38 138 19 HOH HOH A . D 2 HOH 39 139 83 HOH HOH A . D 2 HOH 40 140 155 HOH HOH A . D 2 HOH 41 141 142 HOH HOH A . D 2 HOH 42 142 119 HOH HOH A . D 2 HOH 43 143 107 HOH HOH A . D 2 HOH 44 144 85 HOH HOH A . D 2 HOH 45 145 74 HOH HOH A . D 2 HOH 46 146 114 HOH HOH A . D 2 HOH 47 147 54 HOH HOH A . D 2 HOH 48 148 21 HOH HOH A . D 2 HOH 49 149 76 HOH HOH A . D 2 HOH 50 150 134 HOH HOH A . D 2 HOH 51 151 184 HOH HOH A . D 2 HOH 52 152 136 HOH HOH A . D 2 HOH 53 153 124 HOH HOH A . D 2 HOH 54 154 66 HOH HOH A . D 2 HOH 55 155 27 HOH HOH A . D 2 HOH 56 156 31 HOH HOH A . D 2 HOH 57 157 102 HOH HOH A . D 2 HOH 58 158 108 HOH HOH A . D 2 HOH 59 159 178 HOH HOH A . D 2 HOH 60 160 141 HOH HOH A . D 2 HOH 61 161 137 HOH HOH A . D 2 HOH 62 162 123 HOH HOH A . D 2 HOH 63 163 115 HOH HOH A . D 2 HOH 64 164 109 HOH HOH A . D 2 HOH 65 165 132 HOH HOH A . D 2 HOH 66 166 148 HOH HOH A . E 2 HOH 1 101 89 HOH HOH B . E 2 HOH 2 102 153 HOH HOH B . E 2 HOH 3 103 37 HOH HOH B . E 2 HOH 4 104 157 HOH HOH B . E 2 HOH 5 105 146 HOH HOH B . E 2 HOH 6 106 156 HOH HOH B . E 2 HOH 7 107 88 HOH HOH B . E 2 HOH 8 108 60 HOH HOH B . E 2 HOH 9 109 7 HOH HOH B . E 2 HOH 10 110 81 HOH HOH B . E 2 HOH 11 111 12 HOH HOH B . E 2 HOH 12 112 9 HOH HOH B . E 2 HOH 13 113 20 HOH HOH B . E 2 HOH 14 114 168 HOH HOH B . E 2 HOH 15 115 64 HOH HOH B . E 2 HOH 16 116 166 HOH HOH B . E 2 HOH 17 117 130 HOH HOH B . E 2 HOH 18 118 58 HOH HOH B . E 2 HOH 19 119 28 HOH HOH B . E 2 HOH 20 120 188 HOH HOH B . E 2 HOH 21 121 51 HOH HOH B . E 2 HOH 22 122 179 HOH HOH B . E 2 HOH 23 123 2 HOH HOH B . E 2 HOH 24 124 48 HOH HOH B . E 2 HOH 25 125 171 HOH HOH B . E 2 HOH 26 126 75 HOH HOH B . E 2 HOH 27 127 172 HOH HOH B . E 2 HOH 28 128 92 HOH HOH B . E 2 HOH 29 129 181 HOH HOH B . E 2 HOH 30 130 91 HOH HOH B . E 2 HOH 31 131 22 HOH HOH B . E 2 HOH 32 132 23 HOH HOH B . E 2 HOH 33 133 96 HOH HOH B . E 2 HOH 34 134 180 HOH HOH B . E 2 HOH 35 135 34 HOH HOH B . E 2 HOH 36 136 43 HOH HOH B . E 2 HOH 37 137 72 HOH HOH B . E 2 HOH 38 138 41 HOH HOH B . E 2 HOH 39 139 73 HOH HOH B . E 2 HOH 40 140 182 HOH HOH B . E 2 HOH 41 141 169 HOH HOH B . E 2 HOH 42 142 95 HOH HOH B . E 2 HOH 43 143 135 HOH HOH B . E 2 HOH 44 144 103 HOH HOH B . E 2 HOH 45 145 138 HOH HOH B . E 2 HOH 46 146 118 HOH HOH B . E 2 HOH 47 147 129 HOH HOH B . E 2 HOH 48 148 52 HOH HOH B . E 2 HOH 49 149 67 HOH HOH B . E 2 HOH 50 150 126 HOH HOH B . E 2 HOH 51 151 131 HOH HOH B . E 2 HOH 52 152 59 HOH HOH B . E 2 HOH 53 153 65 HOH HOH B . E 2 HOH 54 154 46 HOH HOH B . E 2 HOH 55 155 150 HOH HOH B . E 2 HOH 56 156 87 HOH HOH B . E 2 HOH 57 157 111 HOH HOH B . E 2 HOH 58 158 175 HOH HOH B . E 2 HOH 59 159 110 HOH HOH B . E 2 HOH 60 160 106 HOH HOH B . E 2 HOH 61 161 113 HOH HOH B . E 2 HOH 62 162 173 HOH HOH B . E 2 HOH 63 163 139 HOH HOH B . E 2 HOH 64 164 112 HOH HOH B . E 2 HOH 65 165 183 HOH HOH B . F 2 HOH 1 101 93 HOH HOH C . F 2 HOH 2 102 90 HOH HOH C . F 2 HOH 3 103 151 HOH HOH C . F 2 HOH 4 104 11 HOH HOH C . F 2 HOH 5 105 29 HOH HOH C . F 2 HOH 6 106 44 HOH HOH C . F 2 HOH 7 107 71 HOH HOH C . F 2 HOH 8 108 161 HOH HOH C . F 2 HOH 9 109 8 HOH HOH C . F 2 HOH 10 110 53 HOH HOH C . F 2 HOH 11 111 56 HOH HOH C . F 2 HOH 12 112 50 HOH HOH C . F 2 HOH 13 113 49 HOH HOH C . F 2 HOH 14 114 1 HOH HOH C . F 2 HOH 15 115 18 HOH HOH C . F 2 HOH 16 116 3 HOH HOH C . F 2 HOH 17 117 30 HOH HOH C . F 2 HOH 18 118 70 HOH HOH C . F 2 HOH 19 119 62 HOH HOH C . F 2 HOH 20 120 4 HOH HOH C . F 2 HOH 21 121 165 HOH HOH C . F 2 HOH 22 122 33 HOH HOH C . F 2 HOH 23 123 40 HOH HOH C . F 2 HOH 24 124 6 HOH HOH C . F 2 HOH 25 125 162 HOH HOH C . F 2 HOH 26 126 13 HOH HOH C . F 2 HOH 27 127 100 HOH HOH C . F 2 HOH 28 128 5 HOH HOH C . F 2 HOH 29 129 26 HOH HOH C . F 2 HOH 30 130 35 HOH HOH C . F 2 HOH 31 131 99 HOH HOH C . F 2 HOH 32 132 94 HOH HOH C . F 2 HOH 33 133 154 HOH HOH C . F 2 HOH 34 134 45 HOH HOH C . F 2 HOH 35 135 97 HOH HOH C . F 2 HOH 36 136 101 HOH HOH C . F 2 HOH 37 137 77 HOH HOH C . F 2 HOH 38 138 133 HOH HOH C . F 2 HOH 39 139 68 HOH HOH C . F 2 HOH 40 140 187 HOH HOH C . F 2 HOH 41 141 144 HOH HOH C . F 2 HOH 42 142 177 HOH HOH C . F 2 HOH 43 143 69 HOH HOH C . F 2 HOH 44 144 170 HOH HOH C . F 2 HOH 45 145 127 HOH HOH C . F 2 HOH 46 146 86 HOH HOH C . F 2 HOH 47 147 105 HOH HOH C . F 2 HOH 48 148 117 HOH HOH C . F 2 HOH 49 149 98 HOH HOH C . F 2 HOH 50 150 104 HOH HOH C . F 2 HOH 51 151 128 HOH HOH C . F 2 HOH 52 152 116 HOH HOH C . F 2 HOH 53 153 120 HOH HOH C . F 2 HOH 54 154 176 HOH HOH C . F 2 HOH 55 155 145 HOH HOH C . F 2 HOH 56 156 122 HOH HOH C . F 2 HOH 57 157 121 HOH HOH C . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLY 27 ? C ? A GLY 27 C 2 1 Y 1 A GLY 27 ? O ? A GLY 27 O # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0107 1 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.15 2 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 3 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? . 5 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 94.590 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 4Z1R _cell.details ? _cell.formula_units_Z ? _cell.length_a 171.573 _cell.length_a_esd ? _cell.length_b 13.939 _cell.length_b_esd ? _cell.length_c 24.981 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 12 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 4Z1R _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 4Z1R _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 1.83 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 32.96 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 292 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '20% PEG 400, 5% acetic acid' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'RAYONIX MX-225' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2013-11-13 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.91841 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'BESSY BEAMLINE 14.2' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.91841 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 14.2 _diffrn_source.pdbx_synchrotron_site BESSY # _reflns.B_iso_Wilson_estimate 11.523 _reflns.entry_id 4Z1R _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.270 _reflns.d_resolution_low 30.00 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 16057 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I -3.000 _reflns.percent_possible_obs 98.600 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs 0.998 _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 3.8 _reflns.pdbx_Rmerge_I_obs 0.052 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 17.150 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared 0.962 _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.060 _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all 60616 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_R_split 1.270 1.350 ? 8.010 ? 7627 2547 ? 2387 93.700 ? ? 0.971 ? 0.148 ? ? ? ? ? ? ? ? ? ? ? ? ? 0.179 ? 0 1 1 ? ? 1.350 1.440 ? 11.110 ? 9656 2464 ? 2458 99.800 ? ? 0.995 ? 0.113 ? ? ? ? ? ? ? ? ? ? ? ? ? 0.130 ? 0 2 1 ? ? 1.440 1.550 ? 12.630 ? 9009 2291 ? 2290 100.000 ? ? 0.991 ? 0.098 ? ? ? ? ? ? ? ? ? ? ? ? ? 0.113 ? 0 3 1 ? ? 1.550 1.700 ? 16.750 ? 8162 2078 ? 2072 99.700 ? ? 0.995 ? 0.070 ? ? ? ? ? ? ? ? ? ? ? ? ? 0.080 ? 0 4 1 ? ? 1.700 1.900 ? 19.420 ? 7582 1920 ? 1915 99.700 ? ? 0.997 ? 0.057 ? ? ? ? ? ? ? ? ? ? ? ? ? 0.065 ? 0 5 1 ? ? 1.900 2.200 ? 24.370 ? 6510 1689 ? 1687 99.900 ? ? 0.997 ? 0.045 ? ? ? ? ? ? ? ? ? ? ? ? ? 0.051 ? 0 6 1 ? ? 2.200 2.690 ? 25.930 ? 5518 1457 ? 1453 99.700 ? ? 0.998 ? 0.042 ? ? ? ? ? ? ? ? ? ? ? ? ? 0.048 ? 0 7 1 ? ? 2.690 3.790 ? 27.700 ? 4285 1142 ? 1132 99.100 ? ? 0.997 ? 0.039 ? ? ? ? ? ? ? ? ? ? ? ? ? 0.045 ? 0 8 1 ? ? 3.790 30.0 ? 27.220 ? 2267 696 ? 663 95.300 ? ? 0.997 ? 0.035 ? ? ? ? ? ? ? ? ? ? ? ? ? 0.041 ? 0 9 1 ? ? # _refine.aniso_B[1][1] 0.5000 _refine.aniso_B[1][2] -0.0000 _refine.aniso_B[1][3] 0.1700 _refine.aniso_B[2][2] -0.4300 _refine.aniso_B[2][3] 0.0000 _refine.aniso_B[3][3] -0.0900 _refine.B_iso_max 37.070 _refine.B_iso_mean 8.1710 _refine.B_iso_min 2.920 _refine.correlation_coeff_Fo_to_Fc 0.9690 _refine.correlation_coeff_Fo_to_Fc_free 0.9600 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : REFINED INDIVIDUALLY' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 4Z1R _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.2700 _refine.ls_d_res_low 28.5000 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 15012 _refine.ls_number_reflns_R_free 1044 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 98.5900 _refine.ls_percent_reflns_R_free 6.5000 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1396 _refine.ls_R_factor_R_free 0.1713 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1374 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 1CAG _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.0500 _refine.pdbx_overall_ESU_R_Free 0.0480 _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 1.4020 _refine.overall_SU_ML 0.0280 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 1.2700 _refine_hist.d_res_low 28.5000 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 188 _refine_hist.number_atoms_total 679 _refine_hist.pdbx_number_residues_total 78 _refine_hist.pdbx_B_iso_mean_solvent 12.94 _refine_hist.pdbx_number_atoms_protein 491 _refine_hist.pdbx_number_atoms_nucleic_acid 0 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.013 0.018 548 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.002 0.017 431 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 2.031 2.377 807 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 1.096 3.000 1069 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 5.881 5.000 77 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 0.085 0.200 80 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.011 0.032 516 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 1.105 0.641 312 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? 1.095 0.636 311 ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? 1.258 0.942 387 ? r_mcangle_it ? ? 'X-RAY DIFFRACTION' ? 1.326 3.000 979 ? r_rigid_bond_restr ? ? 'X-RAY DIFFRACTION' ? 27.855 5.000 8 ? r_sphericity_free ? ? 'X-RAY DIFFRACTION' ? 7.143 5.000 1109 ? r_sphericity_bonded ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 1.2690 _refine_ls_shell.d_res_low 1.3020 _refine_ls_shell.number_reflns_all 1045 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 68 _refine_ls_shell.number_reflns_R_work 977 _refine_ls_shell.percent_reflns_obs 89.0900 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.1860 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.1370 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 4Z1R _struct.title 'Crystal structure of collagen-like peptide at 1.27 Angstrom resolution' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 4Z1R _struct_keywords.text 'Collagen, triple helix, structural protein' _struct_keywords.pdbx_keywords 'STRUCTURAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 2 ? E N N 2 ? F N N 2 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 4Z1R _struct_ref.pdbx_db_accession 4Z1R _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4Z1R A 1 ? 30 ? 4Z1R 1 ? 30 ? 1 30 2 1 4Z1R B 1 ? 30 ? 4Z1R 31 ? 60 ? 31 60 3 1 4Z1R C 1 ? 30 ? 4Z1R 61 ? 90 ? 61 90 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4510 ? 1 MORE -24 ? 1 'SSA (A^2)' 4270 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A PRO 1 C ? ? ? 1_555 A HYP 2 N ? ? A PRO 1 A HYP 2 1_555 ? ? ? ? ? ? ? 1.343 ? ? covale2 covale both ? A HYP 2 C ? ? ? 1_555 A GLY 3 N ? ? A HYP 2 A GLY 3 1_555 ? ? ? ? ? ? ? 1.346 ? ? covale3 covale both ? A PRO 4 C ? ? ? 1_555 A HYP 5 N ? ? A PRO 4 A HYP 5 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale4 covale both ? A HYP 5 C ? ? ? 1_555 A GLY 6 N ? ? A HYP 5 A GLY 6 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale5 covale both ? A PRO 7 C ? ? ? 1_555 A HYP 8 N ? ? A PRO 7 A HYP 8 1_555 ? ? ? ? ? ? ? 1.323 ? ? covale6 covale both ? A HYP 8 C ? ? ? 1_555 A GLY 9 N ? ? A HYP 8 A GLY 9 1_555 ? ? ? ? ? ? ? 1.339 ? ? covale7 covale both ? A PRO 10 C ? ? ? 1_555 A HYP 11 N ? ? A PRO 10 A HYP 11 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale8 covale both ? A HYP 11 C ? ? ? 1_555 A GLY 12 N ? ? A HYP 11 A GLY 12 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale9 covale both ? A PRO 13 C ? ? ? 1_555 A HYP 14 N ? ? A PRO 13 A HYP 14 1_555 ? ? ? ? ? ? ? 1.317 ? ? covale10 covale both ? A HYP 14 C ? ? ? 1_555 A ALA 15 N ? ? A HYP 14 A ALA 15 1_555 ? ? ? ? ? ? ? 1.346 ? ? covale11 covale both ? A PRO 16 C ? ? ? 1_555 A HYP 17 N ? ? A PRO 16 A HYP 17 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale12 covale both ? A HYP 17 C ? ? ? 1_555 A GLY 18 N ? ? A HYP 17 A GLY 18 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale13 covale both ? A PRO 19 C A ? ? 1_555 A HYP 20 N ? ? A PRO 19 A HYP 20 1_555 ? ? ? ? ? ? ? 1.344 ? ? covale14 covale both ? A PRO 19 C B ? ? 1_555 A HYP 20 N ? ? A PRO 19 A HYP 20 1_555 ? ? ? ? ? ? ? 1.323 ? ? covale15 covale both ? A HYP 20 C ? ? ? 1_555 A GLY 21 N ? ? A HYP 20 A GLY 21 1_555 ? ? ? ? ? ? ? 1.342 ? ? covale16 covale both ? A PRO 22 C ? ? ? 1_555 A HYP 23 N ? ? A PRO 22 A HYP 23 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale17 covale both ? A HYP 23 C ? ? ? 1_555 A GLY 24 N ? ? A HYP 23 A GLY 24 1_555 ? ? ? ? ? ? ? 1.322 ? ? covale18 covale both ? A PRO 25 C ? ? ? 1_555 A HYP 26 N ? ? A PRO 25 A HYP 26 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale19 covale both ? A HYP 26 C ? ? ? 1_555 A GLY 27 N ? ? A HYP 26 A GLY 27 1_555 ? ? ? ? ? ? ? 1.340 ? ? covale20 covale both ? B PRO 4 C ? ? ? 1_555 B HYP 5 N ? ? B PRO 34 B HYP 35 1_555 ? ? ? ? ? ? ? 1.348 ? ? covale21 covale both ? B HYP 5 C ? ? ? 1_555 B GLY 6 N ? ? B HYP 35 B GLY 36 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale22 covale both ? B PRO 7 C ? ? ? 1_555 B HYP 8 N ? ? B PRO 37 B HYP 38 1_555 ? ? ? ? ? ? ? 1.322 ? ? covale23 covale both ? B HYP 8 C ? ? ? 1_555 B GLY 9 N ? ? B HYP 38 B GLY 39 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale24 covale both ? B PRO 10 C ? ? ? 1_555 B HYP 11 N ? ? B PRO 40 B HYP 41 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale25 covale both ? B HYP 11 C ? ? ? 1_555 B GLY 12 N ? ? B HYP 41 B GLY 42 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale26 covale both ? B PRO 13 C ? ? ? 1_555 B HYP 14 N ? ? B PRO 43 B HYP 44 1_555 ? ? ? ? ? ? ? 1.323 ? ? covale27 covale both ? B HYP 14 C ? ? ? 1_555 B ALA 15 N ? ? B HYP 44 B ALA 45 1_555 ? ? ? ? ? ? ? 1.339 ? ? covale28 covale both ? B PRO 16 C ? ? ? 1_555 B HYP 17 N ? ? B PRO 46 B HYP 47 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale29 covale both ? B HYP 17 C ? ? ? 1_555 B GLY 18 N ? ? B HYP 47 B GLY 48 1_555 ? ? ? ? ? ? ? 1.340 ? ? covale30 covale both ? B PRO 19 C ? ? ? 1_555 B HYP 20 N ? ? B PRO 49 B HYP 50 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale31 covale both ? B HYP 20 C ? ? ? 1_555 B GLY 21 N ? ? B HYP 50 B GLY 51 1_555 ? ? ? ? ? ? ? 1.320 ? ? covale32 covale both ? B PRO 22 C ? ? ? 1_555 B HYP 23 N ? ? B PRO 52 B HYP 53 1_555 ? ? ? ? ? ? ? 1.338 ? ? covale33 covale both ? B HYP 23 C ? ? ? 1_555 B GLY 24 N ? ? B HYP 53 B GLY 54 1_555 ? ? ? ? ? ? ? 1.348 ? ? covale34 covale both ? B PRO 25 C ? ? ? 1_555 B HYP 26 N ? ? B PRO 55 B HYP 56 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale35 covale both ? B HYP 26 C ? ? ? 1_555 B GLY 27 N ? ? B HYP 56 B GLY 57 1_555 ? ? ? ? ? ? ? 1.337 ? ? covale36 covale both ? C PRO 4 C ? ? ? 1_555 C HYP 5 N ? ? C PRO 64 C HYP 65 1_555 ? ? ? ? ? ? ? 1.339 ? ? covale37 covale both ? C HYP 5 C ? ? ? 1_555 C GLY 6 N ? ? C HYP 65 C GLY 66 1_555 ? ? ? ? ? ? ? 1.343 ? ? covale38 covale both ? C PRO 7 C ? ? ? 1_555 C HYP 8 N ? ? C PRO 67 C HYP 68 1_555 ? ? ? ? ? ? ? 1.318 ? ? covale39 covale both ? C HYP 8 C ? ? ? 1_555 C GLY 9 N ? ? C HYP 68 C GLY 69 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale40 covale both ? C PRO 10 C ? ? ? 1_555 C HYP 11 N ? ? C PRO 70 C HYP 71 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale41 covale both ? C HYP 11 C ? ? ? 1_555 C GLY 12 N ? ? C HYP 71 C GLY 72 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale42 covale both ? C PRO 13 C ? ? ? 1_555 C HYP 14 N ? ? C PRO 73 C HYP 74 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale43 covale both ? C HYP 14 C ? ? ? 1_555 C ALA 15 N ? ? C HYP 74 C ALA 75 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale44 covale both ? C PRO 16 C ? ? ? 1_555 C HYP 17 N ? ? C PRO 76 C HYP 77 1_555 ? ? ? ? ? ? ? 1.344 ? ? covale45 covale both ? C HYP 17 C ? ? ? 1_555 C GLY 18 N ? ? C HYP 77 C GLY 78 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale46 covale both ? C PRO 19 C ? ? ? 1_555 C HYP 20 N ? ? C PRO 79 C HYP 80 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale47 covale both ? C HYP 20 C ? ? ? 1_555 C GLY 21 N ? ? C HYP 80 C GLY 81 1_555 ? ? ? ? ? ? ? 1.344 ? ? covale48 covale both ? C PRO 22 C ? ? ? 1_555 C HYP 23 N ? ? C PRO 82 C HYP 83 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale49 covale both ? C HYP 23 C ? ? ? 1_555 C GLY 24 N ? ? C HYP 83 C GLY 84 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale50 covale both ? C PRO 25 C ? ? ? 1_555 C HYP 26 N ? ? C PRO 85 C HYP 86 1_555 ? ? ? ? ? ? ? 1.340 ? ? covale51 covale both ? C HYP 26 C ? ? ? 1_555 C GLY 27 N ? ? C HYP 86 C GLY 87 1_555 ? ? ? ? ? ? ? 1.350 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _diffrn_reflns.diffrn_id 1 _diffrn_reflns.pdbx_d_res_high 1.270 _diffrn_reflns.pdbx_d_res_low ? _diffrn_reflns.pdbx_number_obs 16057 _diffrn_reflns.pdbx_Rmerge_I_obs 0.052 _diffrn_reflns.pdbx_Rsym_value ? _diffrn_reflns.pdbx_chi_squared 0.96 _diffrn_reflns.pdbx_redundancy ? _diffrn_reflns.pdbx_rejects ? _diffrn_reflns.pdbx_percent_possible_obs 98.60 _diffrn_reflns.pdbx_observed_criterion ? _diffrn_reflns.number 60616 _diffrn_reflns.limit_h_max ? _diffrn_reflns.limit_h_min ? _diffrn_reflns.limit_k_max ? _diffrn_reflns.limit_k_min ? _diffrn_reflns.limit_l_max ? _diffrn_reflns.limit_l_min ? # loop_ _pdbx_diffrn_reflns_shell.diffrn_id _pdbx_diffrn_reflns_shell.d_res_high _pdbx_diffrn_reflns_shell.d_res_low _pdbx_diffrn_reflns_shell.number_obs _pdbx_diffrn_reflns_shell.rejects _pdbx_diffrn_reflns_shell.Rmerge_I_obs _pdbx_diffrn_reflns_shell.Rsym_value _pdbx_diffrn_reflns_shell.chi_squared _pdbx_diffrn_reflns_shell.redundancy _pdbx_diffrn_reflns_shell.percent_possible_obs 1 3.79 30.0 663 ? 0.035 ? ? ? ? 1 2.69 3.79 1132 ? 0.039 ? ? ? ? 1 2.20 2.69 1453 ? 0.042 ? ? ? ? 1 1.90 2.20 1687 ? 0.045 ? ? ? ? 1 1.70 1.90 1915 ? 0.057 ? ? ? ? 1 1.55 1.70 2072 ? 0.070 ? ? ? ? 1 1.44 1.55 2290 ? 0.098 ? ? ? ? 1 1.35 1.44 2458 ? 0.113 ? ? ? ? 1 1.27 1.35 2387 ? 0.148 ? ? ? ? # _pdbx_distant_solvent_atoms.id 1 _pdbx_distant_solvent_atoms.PDB_model_num 1 _pdbx_distant_solvent_atoms.auth_atom_id O _pdbx_distant_solvent_atoms.label_alt_id ? _pdbx_distant_solvent_atoms.auth_asym_id B _pdbx_distant_solvent_atoms.auth_comp_id HOH _pdbx_distant_solvent_atoms.auth_seq_id 165 _pdbx_distant_solvent_atoms.PDB_ins_code ? _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance 7.60 _pdbx_distant_solvent_atoms.neighbor_ligand_distance . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A PRO 28 ? A PRO 28 2 1 Y 1 A HYP 29 ? A HYP 29 3 1 Y 1 A GLY 30 ? A GLY 30 4 1 Y 1 B PRO 31 ? B PRO 1 5 1 Y 1 B HYP 32 ? B HYP 2 6 1 Y 1 B HYP 59 ? B HYP 29 7 1 Y 1 B GLY 60 ? B GLY 30 8 1 Y 1 C PRO 61 ? C PRO 1 9 1 Y 1 C HYP 62 ? C HYP 2 10 1 Y 1 C PRO 88 ? C PRO 28 11 1 Y 1 C HYP 89 ? C HYP 29 12 1 Y 1 C GLY 90 ? C GLY 30 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 GLY N N N N 14 GLY CA C N N 15 GLY C C N N 16 GLY O O N N 17 GLY OXT O N N 18 GLY H H N N 19 GLY H2 H N N 20 GLY HA2 H N N 21 GLY HA3 H N N 22 GLY HXT H N N 23 HOH O O N N 24 HOH H1 H N N 25 HOH H2 H N N 26 HYP N N N N 27 HYP CA C N S 28 HYP C C N N 29 HYP O O N N 30 HYP CB C N N 31 HYP CG C N R 32 HYP CD C N N 33 HYP OD1 O N N 34 HYP OXT O N N 35 HYP H H N N 36 HYP HA H N N 37 HYP HB2 H N N 38 HYP HB3 H N N 39 HYP HG H N N 40 HYP HD22 H N N 41 HYP HD23 H N N 42 HYP HD1 H N N 43 HYP HXT H N N 44 PRO N N N N 45 PRO CA C N S 46 PRO C C N N 47 PRO O O N N 48 PRO CB C N N 49 PRO CG C N N 50 PRO CD C N N 51 PRO OXT O N N 52 PRO H H N N 53 PRO HA H N N 54 PRO HB2 H N N 55 PRO HB3 H N N 56 PRO HG2 H N N 57 PRO HG3 H N N 58 PRO HD2 H N N 59 PRO HD3 H N N 60 PRO HXT H N N 61 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 GLY N CA sing N N 13 GLY N H sing N N 14 GLY N H2 sing N N 15 GLY CA C sing N N 16 GLY CA HA2 sing N N 17 GLY CA HA3 sing N N 18 GLY C O doub N N 19 GLY C OXT sing N N 20 GLY OXT HXT sing N N 21 HOH O H1 sing N N 22 HOH O H2 sing N N 23 HYP N CA sing N N 24 HYP N CD sing N N 25 HYP N H sing N N 26 HYP CA C sing N N 27 HYP CA CB sing N N 28 HYP CA HA sing N N 29 HYP C O doub N N 30 HYP C OXT sing N N 31 HYP CB CG sing N N 32 HYP CB HB2 sing N N 33 HYP CB HB3 sing N N 34 HYP CG CD sing N N 35 HYP CG OD1 sing N N 36 HYP CG HG sing N N 37 HYP CD HD22 sing N N 38 HYP CD HD23 sing N N 39 HYP OD1 HD1 sing N N 40 HYP OXT HXT sing N N 41 PRO N CA sing N N 42 PRO N CD sing N N 43 PRO N H sing N N 44 PRO CA C sing N N 45 PRO CA CB sing N N 46 PRO CA HA sing N N 47 PRO C O doub N N 48 PRO C OXT sing N N 49 PRO CB CG sing N N 50 PRO CB HB2 sing N N 51 PRO CB HB3 sing N N 52 PRO CG CD sing N N 53 PRO CG HG2 sing N N 54 PRO CG HG3 sing N N 55 PRO CD HD2 sing N N 56 PRO CD HD3 sing N N 57 PRO OXT HXT sing N N 58 # _pdbx_audit_support.funding_organization 'National Science Centre' _pdbx_audit_support.country Poland _pdbx_audit_support.grant_number 2011/01/B/ST5/06051 _pdbx_audit_support.ordinal 1 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1CAG _pdbx_initial_refinement_model.details ? # loop_ _pdbx_related_exp_data_set.data_reference _pdbx_related_exp_data_set.data_set_type _pdbx_related_exp_data_set.details _pdbx_related_exp_data_set.metadata_reference _pdbx_related_exp_data_set.ordinal 10.18430/m34z1r 'diffraction image data' ? ? 1 10.18430/m34z1r 'diffraction image data' ? ? 2 # _atom_sites.entry_id 4Z1R _atom_sites.fract_transf_matrix[1][1] 0.005828 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000468 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.071741 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.040159 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O # loop_