data_4Z3A # _entry.id 4Z3A # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4Z3A pdb_00004z3a 10.2210/pdb4z3a/pdb WWPDB D_1000208472 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB . 4XEG unspecified PDB . 4Z47 unspecified PDB . 4Z7B unspecified PDB . 4Z7Z unspecified PDB . 5CYS unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 4Z3A _pdbx_database_status.recvd_initial_deposition_date 2015-03-31 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Pozharski, E.' 1 'Malik, S.S.' 2 'Drohat, A.C.' 3 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_id_ASTM NARHAD _citation.journal_id_CSD 0389 _citation.journal_id_ISSN 1362-4962 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 43 _citation.language ? _citation.page_first 9541 _citation.page_last 9552 _citation.title 'Thymine DNA glycosylase exhibits negligible affinity for nucleobases that it removes from DNA.' _citation.year 2015 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1093/nar/gkv890 _citation.pdbx_database_id_PubMed 26358812 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Malik, S.S.' 1 ? primary 'Coey, C.T.' 2 ? primary 'Varney, K.M.' 3 ? primary 'Pozharski, E.' 4 ? primary 'Drohat, A.C.' 5 ? # _cell.entry_id 4Z3A _cell.length_a 95.158 _cell.length_b 53.565 _cell.length_c 81.390 _cell.angle_alpha 90.00 _cell.angle_beta 95.06 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4Z3A _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'G/T mismatch-specific thymine DNA glycosylase' 23070.670 1 3.2.2.29 ? 'UNP residues 111-308' ? 2 polymer syn 'DNA (28-MER)' 8646.565 1 ? ? ? ? 3 polymer syn 'DNA (28-MER)' 8473.431 1 ? ? ? ? 4 water nat water 18.015 185 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Thymine-DNA glycosylase,hTDG' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GSHMASFNGVSEAELLTKTLPDILTFNLDIVIIGINPGLMAAYKGHHYPGPGNHFWKCLFMSGLSEVQLNHMDDHTLPGK YGIGFTNMVERTTPGSKDLSSKEFREGGRILVQKLQKYQPRIAVFNGKCIYEIFSKEVFGVKVKNLEFGLQPHKIPDTET LCYVMPSSSARCAQFPRAQDKVHYYIKLKDLRDQLKGIERNMDV ; ;GSHMASFNGVSEAELLTKTLPDILTFNLDIVIIGINPGLMAAYKGHHYPGPGNHFWKCLFMSGLSEVQLNHMDDHTLPGK YGIGFTNMVERTTPGSKDLSSKEFREGGRILVQKLQKYQPRIAVFNGKCIYEIFSKEVFGVKVKNLEFGLQPHKIPDTET LCYVMPSSSARCAQFPRAQDKVHYYIKLKDLRDQLKGIERNMDV ; A ? 2 polydeoxyribonucleotide no no ;(DC)(DA)(DG)(DC)(DT)(DC)(DT)(DG)(DT)(DA)(DC)(DG)(DT)(DG)(DA)(DG)(DC)(DG)(DA)(DT) (DG)(DG)(DA)(DC)(DA)(DG)(DC)(DT) ; CAGCTCTGTACGTGAGCGATGGACAGCT C ? 3 polydeoxyribonucleotide no yes ;(DA)(DG)(DC)(DT)(DG)(DT)(DC)(DC)(DA)(DT)(DC)(DG)(DC)(DT)(DC)(DA)(ORP)(DG)(DT) (DA)(DC)(DA)(DG)(DA)(DG)(DC)(DT)(DG) ; AGCTGTCCATCGCTCAXGTACAGAGCTG D ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 HIS n 1 4 MET n 1 5 ALA n 1 6 SER n 1 7 PHE n 1 8 ASN n 1 9 GLY n 1 10 VAL n 1 11 SER n 1 12 GLU n 1 13 ALA n 1 14 GLU n 1 15 LEU n 1 16 LEU n 1 17 THR n 1 18 LYS n 1 19 THR n 1 20 LEU n 1 21 PRO n 1 22 ASP n 1 23 ILE n 1 24 LEU n 1 25 THR n 1 26 PHE n 1 27 ASN n 1 28 LEU n 1 29 ASP n 1 30 ILE n 1 31 VAL n 1 32 ILE n 1 33 ILE n 1 34 GLY n 1 35 ILE n 1 36 ASN n 1 37 PRO n 1 38 GLY n 1 39 LEU n 1 40 MET n 1 41 ALA n 1 42 ALA n 1 43 TYR n 1 44 LYS n 1 45 GLY n 1 46 HIS n 1 47 HIS n 1 48 TYR n 1 49 PRO n 1 50 GLY n 1 51 PRO n 1 52 GLY n 1 53 ASN n 1 54 HIS n 1 55 PHE n 1 56 TRP n 1 57 LYS n 1 58 CYS n 1 59 LEU n 1 60 PHE n 1 61 MET n 1 62 SER n 1 63 GLY n 1 64 LEU n 1 65 SER n 1 66 GLU n 1 67 VAL n 1 68 GLN n 1 69 LEU n 1 70 ASN n 1 71 HIS n 1 72 MET n 1 73 ASP n 1 74 ASP n 1 75 HIS n 1 76 THR n 1 77 LEU n 1 78 PRO n 1 79 GLY n 1 80 LYS n 1 81 TYR n 1 82 GLY n 1 83 ILE n 1 84 GLY n 1 85 PHE n 1 86 THR n 1 87 ASN n 1 88 MET n 1 89 VAL n 1 90 GLU n 1 91 ARG n 1 92 THR n 1 93 THR n 1 94 PRO n 1 95 GLY n 1 96 SER n 1 97 LYS n 1 98 ASP n 1 99 LEU n 1 100 SER n 1 101 SER n 1 102 LYS n 1 103 GLU n 1 104 PHE n 1 105 ARG n 1 106 GLU n 1 107 GLY n 1 108 GLY n 1 109 ARG n 1 110 ILE n 1 111 LEU n 1 112 VAL n 1 113 GLN n 1 114 LYS n 1 115 LEU n 1 116 GLN n 1 117 LYS n 1 118 TYR n 1 119 GLN n 1 120 PRO n 1 121 ARG n 1 122 ILE n 1 123 ALA n 1 124 VAL n 1 125 PHE n 1 126 ASN n 1 127 GLY n 1 128 LYS n 1 129 CYS n 1 130 ILE n 1 131 TYR n 1 132 GLU n 1 133 ILE n 1 134 PHE n 1 135 SER n 1 136 LYS n 1 137 GLU n 1 138 VAL n 1 139 PHE n 1 140 GLY n 1 141 VAL n 1 142 LYS n 1 143 VAL n 1 144 LYS n 1 145 ASN n 1 146 LEU n 1 147 GLU n 1 148 PHE n 1 149 GLY n 1 150 LEU n 1 151 GLN n 1 152 PRO n 1 153 HIS n 1 154 LYS n 1 155 ILE n 1 156 PRO n 1 157 ASP n 1 158 THR n 1 159 GLU n 1 160 THR n 1 161 LEU n 1 162 CYS n 1 163 TYR n 1 164 VAL n 1 165 MET n 1 166 PRO n 1 167 SER n 1 168 SER n 1 169 SER n 1 170 ALA n 1 171 ARG n 1 172 CYS n 1 173 ALA n 1 174 GLN n 1 175 PHE n 1 176 PRO n 1 177 ARG n 1 178 ALA n 1 179 GLN n 1 180 ASP n 1 181 LYS n 1 182 VAL n 1 183 HIS n 1 184 TYR n 1 185 TYR n 1 186 ILE n 1 187 LYS n 1 188 LEU n 1 189 LYS n 1 190 ASP n 1 191 LEU n 1 192 ARG n 1 193 ASP n 1 194 GLN n 1 195 LEU n 1 196 LYS n 1 197 GLY n 1 198 ILE n 1 199 GLU n 1 200 ARG n 1 201 ASN n 1 202 MET n 1 203 ASP n 1 204 VAL n 2 1 DC n 2 2 DA n 2 3 DG n 2 4 DC n 2 5 DT n 2 6 DC n 2 7 DT n 2 8 DG n 2 9 DT n 2 10 DA n 2 11 DC n 2 12 DG n 2 13 DT n 2 14 DG n 2 15 DA n 2 16 DG n 2 17 DC n 2 18 DG n 2 19 DA n 2 20 DT n 2 21 DG n 2 22 DG n 2 23 DA n 2 24 DC n 2 25 DA n 2 26 DG n 2 27 DC n 2 28 DT n 3 1 DA n 3 2 DG n 3 3 DC n 3 4 DT n 3 5 DG n 3 6 DT n 3 7 DC n 3 8 DC n 3 9 DA n 3 10 DT n 3 11 DC n 3 12 DG n 3 13 DC n 3 14 DT n 3 15 DC n 3 16 DA n 3 17 ORP y 3 17 AAB y 3 18 DG n 3 19 DT n 3 20 DA n 3 21 DC n 3 22 DA n 3 23 DG n 3 24 DA n 3 25 DG n 3 26 DC n 3 27 DT n 3 28 DG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 204 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene TDG _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample 1 28 'synthetic construct' ? 32630 ? 3 1 sample 1 28 'synthetic construct' ? 32630 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP TDG_HUMAN Q13569 ? 1 ;FNGVSEAELLTKTLPDILTFNLDIVIIGINPGLMAAYKGHHYPGPGNHFWKCLFMSGLSEVQLNHMDDHTLPGKYGIGFT NMVERTTPGSKDLSSKEFREGGRILVQKLQKYQPRIAVFNGKCIYEIFSKEVFGVKVKNLEFGLQPHKIPDTETLCYVMP SSSARCAQFPRAQDKVHYYIKLKDLRDQLKGIERNMDV ; 111 2 PDB 4Z3A 4Z3A ? 2 ? 1 3 PDB 4Z3A 4Z3A ? 3 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4Z3A A 7 ? 204 ? Q13569 111 ? 308 ? 111 308 2 2 4Z3A C 1 ? 28 ? 4Z3A 1 ? 28 ? 1 28 3 3 4Z3A D 1 ? 28 ? 4Z3A 1 ? 28 ? 1 28 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4Z3A GLY A 1 ? UNP Q13569 ? ? 'expression tag' 105 1 1 4Z3A SER A 2 ? UNP Q13569 ? ? 'expression tag' 106 2 1 4Z3A HIS A 3 ? UNP Q13569 ? ? 'expression tag' 107 3 1 4Z3A MET A 4 ? UNP Q13569 ? ? 'expression tag' 108 4 1 4Z3A ALA A 5 ? UNP Q13569 ? ? 'expression tag' 109 5 1 4Z3A SER A 6 ? UNP Q13569 ? ? 'expression tag' 110 6 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight AAB 'DNA linking' . "2'-DEOXY-RIBOFURANOSE-5'-MONOPHOSPHATE" 'ABASIC DEOXYRIBOSE' 'C5 H11 O7 P' 214.110 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 ORP saccharide . 2-DEOXY-5-PHOSPHONO-RIBOSE ? 'C5 H11 O7 P' 214.110 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 4Z3A _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.57 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 52.17 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 6.0 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.2 M Ammonium chloride, 20% PEG 3350' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'PSI PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2015-01-24 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9795 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SSRL BEAMLINE BL12-2' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9795 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL12-2 _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4Z3A _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 32.240 _reflns.d_resolution_high 1.720 _reflns.number_obs 43547 _reflns.number_all ? _reflns.percent_possible_obs 97.7 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 6.6400 _reflns.B_iso_Wilson_estimate 31.54 _reflns.pdbx_redundancy 8.800 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.72 _reflns_shell.d_res_low 1.76 _reflns_shell.percent_possible_all 92.4 _reflns_shell.Rmerge_I_obs 0.04400 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 0.570 _reflns_shell.pdbx_redundancy 4.63 _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_all ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4Z3A _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 42189 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 32.24 _refine.ls_d_res_high 1.72 _refine.ls_percent_reflns_obs 96.9 _refine.ls_R_factor_obs 0.200 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.199 _refine.ls_R_factor_R_free 0.226 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.760 _refine.ls_number_reflns_R_free 1732 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.942 _refine.correlation_coeff_Fo_to_Fc_free 0.932 _refine.B_iso_mean 49.76 _refine.aniso_B[1][1] -10.61530 _refine.aniso_B[2][2] -0.05590 _refine.aniso_B[3][3] 10.67110 _refine.aniso_B[1][2] 0.00000 _refine.aniso_B[1][3] -0.03590 _refine.aniso_B[2][3] 0.00000 _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 4FNC _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI 0.106 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI 0.103 _refine.pdbx_overall_SU_R_Blow_DPI 0.113 _refine.pdbx_overall_SU_R_free_Blow_DPI 0.107 # _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_analyze.entry_id 4Z3A _refine_analyze.Luzzati_coordinate_error_obs 0.357 _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1550 _refine_hist.pdbx_number_atoms_nucleic_acid 1135 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 185 _refine_hist.number_atoms_total 2870 _refine_hist.d_res_high 1.72 _refine_hist.d_res_low 32.24 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function t_bond_d 0.010 ? 2.000 2949 'X-RAY DIFFRACTION' HARMONIC t_angle_deg 0.99 ? 2.000 4229 'X-RAY DIFFRACTION' HARMONIC t_dihedral_angle_d ? ? 2.000 861 'X-RAY DIFFRACTION' SINUSOIDAL t_incorr_chiral_ct ? ? ? ? 'X-RAY DIFFRACTION' ? t_pseud_angle ? ? ? ? 'X-RAY DIFFRACTION' ? t_trig_c_planes ? ? 2.000 34 'X-RAY DIFFRACTION' HARMONIC t_gen_planes ? ? 5.000 297 'X-RAY DIFFRACTION' HARMONIC t_it ? ? 20.000 2949 'X-RAY DIFFRACTION' HARMONIC t_nbd ? ? ? ? 'X-RAY DIFFRACTION' ? t_omega_torsion 3.31 ? ? ? 'X-RAY DIFFRACTION' ? t_other_torsion 21.40 ? ? ? 'X-RAY DIFFRACTION' ? t_improper_torsion ? ? ? ? 'X-RAY DIFFRACTION' ? t_chiral_improper_torsion ? ? 5.000 378 'X-RAY DIFFRACTION' SEMIHARMONIC t_sum_occupancies ? ? ? ? 'X-RAY DIFFRACTION' ? t_utility_distance ? ? ? ? 'X-RAY DIFFRACTION' ? t_utility_angle ? ? ? ? 'X-RAY DIFFRACTION' ? t_utility_torsion ? ? ? ? 'X-RAY DIFFRACTION' ? t_ideal_dist_contact ? ? 4.000 3136 'X-RAY DIFFRACTION' SEMIHARMONIC # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.d_res_high 1.72 _refine_ls_shell.d_res_low 1.76 _refine_ls_shell.number_reflns_R_work 2760 _refine_ls_shell.R_factor_R_work 0.2627 _refine_ls_shell.percent_reflns_obs 96.87 _refine_ls_shell.R_factor_R_free 0.2567 _refine_ls_shell.R_factor_R_free_error 0.022 _refine_ls_shell.percent_reflns_R_free 5.02 _refine_ls_shell.number_reflns_R_free 146 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.number_reflns_obs ? # _struct.entry_id 4Z3A _struct.title 'Acetate-free structure of the enzyme-product complex resulting from TDG action on a GU mismatch' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 4Z3A _struct_keywords.text 'protein-DNA complex, Hydrolase-DNA complex' _struct_keywords.pdbx_keywords Hydrolase/DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 HIS A 3 ? ASN A 8 ? HIS A 107 ASN A 112 5 ? 6 HELX_P HELX_P2 AA2 SER A 11 ? THR A 17 ? SER A 115 THR A 121 1 ? 7 HELX_P HELX_P3 AA3 GLY A 38 ? GLY A 45 ? GLY A 142 GLY A 149 1 ? 8 HELX_P HELX_P4 AA4 HIS A 54 ? SER A 62 ? HIS A 158 SER A 166 1 ? 9 HELX_P HELX_P5 AA5 ASN A 70 ? HIS A 75 ? ASN A 174 HIS A 179 5 ? 6 HELX_P HELX_P6 AA6 THR A 76 ? GLY A 82 ? THR A 180 GLY A 186 1 ? 7 HELX_P HELX_P7 AA7 GLY A 95 ? LEU A 99 ? GLY A 199 LEU A 203 5 ? 5 HELX_P HELX_P8 AA8 SER A 100 ? GLN A 119 ? SER A 204 GLN A 223 1 ? 20 HELX_P HELX_P9 AA9 GLY A 127 ? PHE A 139 ? GLY A 231 PHE A 243 1 ? 13 HELX_P HELX_P10 AB1 ARG A 177 ? LYS A 196 ? ARG A 281 LYS A 300 1 ? 20 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? C DA 16 "O3'" ? ? ? 1_555 C ORP 17 P A ? D DA 16 D ORP 17 1_555 ? ? ? ? ? ? ? 1.591 ? ? covale2 covale one ? C DA 16 "O3'" ? ? ? 1_555 C AAB 17 P B ? D DA 16 D AAB 17 1_555 ? ? ? ? ? ? ? 1.489 ? ? covale3 covale one ? C ORP 17 O3 A ? ? 1_555 C DG 18 P ? ? D ORP 17 D DG 18 1_555 ? ? ? ? ? ? ? 1.596 ? ? covale4 covale one ? C AAB 17 "O3'" B ? ? 1_555 C DG 18 P ? ? D AAB 17 D DG 18 1_555 ? ? ? ? ? ? ? 1.636 ? ? hydrog1 hydrog ? ? B DC 1 N3 ? ? ? 1_555 C DG 28 N1 ? ? C DC 1 D DG 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B DC 1 N4 ? ? ? 1_555 C DG 28 O6 ? ? C DC 1 D DG 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B DC 1 O2 ? ? ? 1_555 C DG 28 N2 ? ? C DC 1 D DG 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B DA 2 N1 ? ? ? 1_555 C DT 27 N3 ? ? C DA 2 D DT 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B DA 2 N6 ? ? ? 1_555 C DT 27 O4 ? ? C DA 2 D DT 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B DG 3 N1 ? ? ? 1_555 C DC 26 N3 ? ? C DG 3 D DC 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B DG 3 N2 ? ? ? 1_555 C DC 26 O2 ? ? C DG 3 D DC 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B DG 3 O6 ? ? ? 1_555 C DC 26 N4 ? ? C DG 3 D DC 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B DC 4 N3 ? ? ? 1_555 C DG 25 N1 ? ? C DC 4 D DG 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B DC 4 N4 ? ? ? 1_555 C DG 25 O6 ? ? C DC 4 D DG 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B DC 4 O2 ? ? ? 1_555 C DG 25 N2 ? ? C DC 4 D DG 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B DT 5 N3 ? ? ? 1_555 C DA 24 N1 ? ? C DT 5 D DA 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B DT 5 O4 ? ? ? 1_555 C DA 24 N6 ? ? C DT 5 D DA 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B DC 6 N3 ? ? ? 1_555 C DG 23 N1 ? ? C DC 6 D DG 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B DC 6 N4 ? ? ? 1_555 C DG 23 O6 ? ? C DC 6 D DG 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? B DC 6 O2 ? ? ? 1_555 C DG 23 N2 ? ? C DC 6 D DG 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B DT 7 N3 ? ? ? 1_555 C DA 22 N1 ? ? C DT 7 D DA 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B DT 7 O4 ? ? ? 1_555 C DA 22 N6 ? ? C DT 7 D DA 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B DG 8 N1 ? ? ? 1_555 C DC 21 N3 ? ? C DG 8 D DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? B DG 8 N2 ? ? ? 1_555 C DC 21 O2 ? ? C DG 8 D DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? B DG 8 O6 ? ? ? 1_555 C DC 21 N4 ? ? C DG 8 D DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? B DT 9 N3 ? ? ? 1_555 C DA 20 N1 ? ? C DT 9 D DA 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? B DT 9 O4 ? ? ? 1_555 C DA 20 N6 ? ? C DT 9 D DA 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? B DA 10 N1 ? ? ? 1_555 C DT 19 N3 ? ? C DA 10 D DT 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? B DA 10 N6 ? ? ? 1_555 C DT 19 O4 ? ? C DA 10 D DT 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? B DC 11 N3 ? ? ? 1_555 C DG 18 N1 ? ? C DC 11 D DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? B DC 11 N4 ? ? ? 1_555 C DG 18 O6 ? ? C DC 11 D DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? B DC 11 O2 ? ? ? 1_555 C DG 18 N2 ? ? C DC 11 D DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? B DT 13 N3 ? ? ? 1_555 C DA 16 N1 ? ? C DT 13 D DA 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? B DT 13 O4 ? ? ? 1_555 C DA 16 N6 ? ? C DT 13 D DA 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? B DG 14 N1 ? ? ? 1_555 C DC 15 N3 ? ? C DG 14 D DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? B DG 14 N2 ? ? ? 1_555 C DC 15 O2 ? ? C DG 14 D DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? B DG 14 O6 ? ? ? 1_555 C DC 15 N4 ? ? C DG 14 D DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? B DA 15 N1 ? ? ? 1_555 C DT 14 N3 ? ? C DA 15 D DT 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? B DA 15 N6 ? ? ? 1_555 C DT 14 O4 ? ? C DA 15 D DT 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? B DG 16 N1 ? ? ? 1_555 C DC 13 N3 ? ? C DG 16 D DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? B DG 16 N2 ? ? ? 1_555 C DC 13 O2 ? ? C DG 16 D DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? B DG 16 O6 ? ? ? 1_555 C DC 13 N4 ? ? C DG 16 D DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? B DC 17 N3 ? ? ? 1_555 C DG 12 N1 A ? C DC 17 D DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? B DC 17 N4 ? ? ? 1_555 C DG 12 O6 A ? C DC 17 D DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? B DC 17 O2 ? ? ? 1_555 C DG 12 N2 A ? C DC 17 D DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? B DG 18 N1 ? ? ? 1_555 C DC 11 N3 A ? C DG 18 D DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? B DG 18 N2 ? ? ? 1_555 C DC 11 O2 A ? C DG 18 D DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? B DG 18 O6 ? ? ? 1_555 C DC 11 N4 A ? C DG 18 D DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? B DA 19 N1 ? ? ? 1_555 C DT 10 N3 ? ? C DA 19 D DT 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? B DA 19 N6 ? ? ? 1_555 C DT 10 O4 ? ? C DA 19 D DT 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? B DT 20 N3 ? ? ? 1_555 C DA 9 N1 ? ? C DT 20 D DA 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? B DT 20 O4 ? ? ? 1_555 C DA 9 N6 ? ? C DT 20 D DA 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? B DG 21 N1 ? ? ? 1_555 C DC 8 N3 ? ? C DG 21 D DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? B DG 21 N2 ? ? ? 1_555 C DC 8 O2 ? ? C DG 21 D DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? B DG 21 O6 ? ? ? 1_555 C DC 8 N4 ? ? C DG 21 D DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? B DG 22 N1 ? ? ? 1_555 C DC 7 N3 ? ? C DG 22 D DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? B DG 22 N2 ? ? ? 1_555 C DC 7 O2 ? ? C DG 22 D DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? B DG 22 O6 ? ? ? 1_555 C DC 7 N4 ? ? C DG 22 D DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? B DA 23 N1 ? ? ? 1_555 C DT 6 N3 ? ? C DA 23 D DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? B DA 23 N6 ? ? ? 1_555 C DT 6 O4 ? ? C DA 23 D DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? B DC 24 N3 ? ? ? 1_555 C DG 5 N1 ? ? C DC 24 D DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? B DC 24 N4 ? ? ? 1_555 C DG 5 O6 ? ? C DC 24 D DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? B DC 24 O2 ? ? ? 1_555 C DG 5 N2 ? ? C DC 24 D DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? B DA 25 N1 ? ? ? 1_555 C DT 4 N3 ? ? C DA 25 D DT 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? B DA 25 N6 ? ? ? 1_555 C DT 4 O4 ? ? C DA 25 D DT 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? B DG 26 N1 ? ? ? 1_555 C DC 3 N3 ? ? C DG 26 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? B DG 26 N2 ? ? ? 1_555 C DC 3 O2 ? ? C DG 26 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? B DG 26 O6 ? ? ? 1_555 C DC 3 N4 ? ? C DG 26 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? B DC 27 N3 ? ? ? 1_555 C DG 2 N1 ? ? C DC 27 D DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? B DC 27 N4 ? ? ? 1_555 C DG 2 O6 ? ? C DC 27 D DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? B DC 27 O2 ? ? ? 1_555 C DG 2 N2 ? ? C DC 27 D DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? B DT 28 N3 ? ? ? 1_555 C DA 1 N1 ? ? C DT 28 D DA 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog69 hydrog ? ? B DT 28 O4 ? ? ? 1_555 C DA 1 N6 ? ? C DT 28 D DA 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? parallel AA1 2 3 ? parallel AA1 3 4 ? parallel AA1 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ILE A 83 ? ASN A 87 ? ILE A 187 ASN A 191 AA1 2 ILE A 30 ? GLY A 34 ? ILE A 134 GLY A 138 AA1 3 ILE A 122 ? ASN A 126 ? ILE A 226 ASN A 230 AA1 4 LEU A 161 ? MET A 165 ? LEU A 265 MET A 269 AA1 5 GLY A 149 ? LYS A 154 ? GLY A 253 LYS A 258 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O GLY A 84 ? O GLY A 188 N ILE A 32 ? N ILE A 136 AA1 2 3 N ILE A 33 ? N ILE A 137 O VAL A 124 ? O VAL A 228 AA1 3 4 N ALA A 123 ? N ALA A 227 O LEU A 161 ? O LEU A 265 AA1 4 5 O VAL A 164 ? O VAL A 268 N GLY A 149 ? N GLY A 253 # _atom_sites.entry_id 4Z3A _atom_sites.fract_transf_matrix[1][1] 0.010509 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000930 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018669 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012335 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 105 105 GLY GLY A . n A 1 2 SER 2 106 106 SER SER A . n A 1 3 HIS 3 107 107 HIS HIS A . n A 1 4 MET 4 108 108 MET MET A . n A 1 5 ALA 5 109 109 ALA ALA A . n A 1 6 SER 6 110 110 SER SER A . n A 1 7 PHE 7 111 111 PHE PHE A . n A 1 8 ASN 8 112 112 ASN ASN A . n A 1 9 GLY 9 113 113 GLY GLY A . n A 1 10 VAL 10 114 114 VAL VAL A . n A 1 11 SER 11 115 115 SER SER A . n A 1 12 GLU 12 116 116 GLU GLU A . n A 1 13 ALA 13 117 117 ALA ALA A . n A 1 14 GLU 14 118 118 GLU GLU A . n A 1 15 LEU 15 119 119 LEU LEU A . n A 1 16 LEU 16 120 120 LEU LEU A . n A 1 17 THR 17 121 121 THR THR A . n A 1 18 LYS 18 122 122 LYS LYS A . n A 1 19 THR 19 123 123 THR THR A . n A 1 20 LEU 20 124 124 LEU LEU A . n A 1 21 PRO 21 125 125 PRO PRO A . n A 1 22 ASP 22 126 126 ASP ASP A . n A 1 23 ILE 23 127 127 ILE ILE A . n A 1 24 LEU 24 128 128 LEU LEU A . n A 1 25 THR 25 129 129 THR THR A . n A 1 26 PHE 26 130 130 PHE PHE A . n A 1 27 ASN 27 131 131 ASN ASN A . n A 1 28 LEU 28 132 132 LEU LEU A . n A 1 29 ASP 29 133 133 ASP ASP A . n A 1 30 ILE 30 134 134 ILE ILE A . n A 1 31 VAL 31 135 135 VAL VAL A . n A 1 32 ILE 32 136 136 ILE ILE A . n A 1 33 ILE 33 137 137 ILE ILE A . n A 1 34 GLY 34 138 138 GLY GLY A . n A 1 35 ILE 35 139 139 ILE ILE A . n A 1 36 ASN 36 140 140 ASN ASN A . n A 1 37 PRO 37 141 141 PRO PRO A . n A 1 38 GLY 38 142 142 GLY GLY A . n A 1 39 LEU 39 143 143 LEU LEU A . n A 1 40 MET 40 144 144 MET MET A . n A 1 41 ALA 41 145 145 ALA ALA A . n A 1 42 ALA 42 146 146 ALA ALA A . n A 1 43 TYR 43 147 147 TYR TYR A . n A 1 44 LYS 44 148 148 LYS LYS A . n A 1 45 GLY 45 149 149 GLY GLY A . n A 1 46 HIS 46 150 150 HIS HIS A . n A 1 47 HIS 47 151 151 HIS HIS A . n A 1 48 TYR 48 152 152 TYR TYR A . n A 1 49 PRO 49 153 153 PRO PRO A . n A 1 50 GLY 50 154 154 GLY GLY A . n A 1 51 PRO 51 155 155 PRO PRO A . n A 1 52 GLY 52 156 156 GLY GLY A . n A 1 53 ASN 53 157 157 ASN ASN A . n A 1 54 HIS 54 158 158 HIS HIS A . n A 1 55 PHE 55 159 159 PHE PHE A . n A 1 56 TRP 56 160 160 TRP TRP A . n A 1 57 LYS 57 161 161 LYS LYS A . n A 1 58 CYS 58 162 162 CYS CYS A . n A 1 59 LEU 59 163 163 LEU LEU A . n A 1 60 PHE 60 164 164 PHE PHE A . n A 1 61 MET 61 165 165 MET MET A . n A 1 62 SER 62 166 166 SER SER A . n A 1 63 GLY 63 167 167 GLY GLY A . n A 1 64 LEU 64 168 168 LEU LEU A . n A 1 65 SER 65 169 169 SER SER A . n A 1 66 GLU 66 170 170 GLU GLU A . n A 1 67 VAL 67 171 171 VAL VAL A . n A 1 68 GLN 68 172 172 GLN GLN A . n A 1 69 LEU 69 173 173 LEU LEU A . n A 1 70 ASN 70 174 174 ASN ASN A . n A 1 71 HIS 71 175 175 HIS HIS A . n A 1 72 MET 72 176 176 MET MET A . n A 1 73 ASP 73 177 177 ASP ASP A . n A 1 74 ASP 74 178 178 ASP ASP A . n A 1 75 HIS 75 179 179 HIS HIS A . n A 1 76 THR 76 180 180 THR THR A . n A 1 77 LEU 77 181 181 LEU LEU A . n A 1 78 PRO 78 182 182 PRO PRO A . n A 1 79 GLY 79 183 183 GLY GLY A . n A 1 80 LYS 80 184 184 LYS LYS A . n A 1 81 TYR 81 185 185 TYR TYR A . n A 1 82 GLY 82 186 186 GLY GLY A . n A 1 83 ILE 83 187 187 ILE ILE A . n A 1 84 GLY 84 188 188 GLY GLY A . n A 1 85 PHE 85 189 189 PHE PHE A . n A 1 86 THR 86 190 190 THR THR A . n A 1 87 ASN 87 191 191 ASN ASN A . n A 1 88 MET 88 192 192 MET MET A . n A 1 89 VAL 89 193 193 VAL VAL A . n A 1 90 GLU 90 194 194 GLU GLU A . n A 1 91 ARG 91 195 195 ARG ARG A . n A 1 92 THR 92 196 196 THR THR A . n A 1 93 THR 93 197 197 THR THR A . n A 1 94 PRO 94 198 198 PRO PRO A . n A 1 95 GLY 95 199 199 GLY GLY A . n A 1 96 SER 96 200 200 SER SER A . n A 1 97 LYS 97 201 201 LYS LYS A . n A 1 98 ASP 98 202 202 ASP ASP A . n A 1 99 LEU 99 203 203 LEU LEU A . n A 1 100 SER 100 204 204 SER SER A . n A 1 101 SER 101 205 205 SER SER A . n A 1 102 LYS 102 206 206 LYS LYS A . n A 1 103 GLU 103 207 207 GLU GLU A . n A 1 104 PHE 104 208 208 PHE PHE A . n A 1 105 ARG 105 209 209 ARG ARG A . n A 1 106 GLU 106 210 210 GLU GLU A . n A 1 107 GLY 107 211 211 GLY GLY A . n A 1 108 GLY 108 212 212 GLY GLY A . n A 1 109 ARG 109 213 213 ARG ARG A . n A 1 110 ILE 110 214 214 ILE ILE A . n A 1 111 LEU 111 215 215 LEU LEU A . n A 1 112 VAL 112 216 216 VAL VAL A . n A 1 113 GLN 113 217 217 GLN GLN A . n A 1 114 LYS 114 218 218 LYS LYS A . n A 1 115 LEU 115 219 219 LEU LEU A . n A 1 116 GLN 116 220 220 GLN GLN A . n A 1 117 LYS 117 221 221 LYS LYS A . n A 1 118 TYR 118 222 222 TYR TYR A . n A 1 119 GLN 119 223 223 GLN GLN A . n A 1 120 PRO 120 224 224 PRO PRO A . n A 1 121 ARG 121 225 225 ARG ARG A . n A 1 122 ILE 122 226 226 ILE ILE A . n A 1 123 ALA 123 227 227 ALA ALA A . n A 1 124 VAL 124 228 228 VAL VAL A . n A 1 125 PHE 125 229 229 PHE PHE A . n A 1 126 ASN 126 230 230 ASN ASN A . n A 1 127 GLY 127 231 231 GLY GLY A . n A 1 128 LYS 128 232 232 LYS LYS A . n A 1 129 CYS 129 233 233 CYS CYS A . n A 1 130 ILE 130 234 234 ILE ILE A . n A 1 131 TYR 131 235 235 TYR TYR A . n A 1 132 GLU 132 236 236 GLU GLU A . n A 1 133 ILE 133 237 237 ILE ILE A . n A 1 134 PHE 134 238 238 PHE PHE A . n A 1 135 SER 135 239 239 SER SER A . n A 1 136 LYS 136 240 240 LYS LYS A . n A 1 137 GLU 137 241 241 GLU GLU A . n A 1 138 VAL 138 242 242 VAL VAL A . n A 1 139 PHE 139 243 243 PHE PHE A . n A 1 140 GLY 140 244 244 GLY GLY A . n A 1 141 VAL 141 245 245 VAL VAL A . n A 1 142 LYS 142 246 246 LYS LYS A . n A 1 143 VAL 143 247 247 VAL VAL A . n A 1 144 LYS 144 248 248 LYS LYS A . n A 1 145 ASN 145 249 249 ASN ASN A . n A 1 146 LEU 146 250 250 LEU LEU A . n A 1 147 GLU 147 251 251 GLU GLU A . n A 1 148 PHE 148 252 252 PHE PHE A . n A 1 149 GLY 149 253 253 GLY GLY A . n A 1 150 LEU 150 254 254 LEU LEU A . n A 1 151 GLN 151 255 255 GLN GLN A . n A 1 152 PRO 152 256 256 PRO PRO A . n A 1 153 HIS 153 257 257 HIS HIS A . n A 1 154 LYS 154 258 258 LYS LYS A . n A 1 155 ILE 155 259 259 ILE ILE A . n A 1 156 PRO 156 260 260 PRO PRO A . n A 1 157 ASP 157 261 261 ASP ASP A . n A 1 158 THR 158 262 262 THR THR A . n A 1 159 GLU 159 263 263 GLU GLU A . n A 1 160 THR 160 264 264 THR THR A . n A 1 161 LEU 161 265 265 LEU LEU A . n A 1 162 CYS 162 266 266 CYS CYS A . n A 1 163 TYR 163 267 267 TYR TYR A . n A 1 164 VAL 164 268 268 VAL VAL A . n A 1 165 MET 165 269 269 MET MET A . n A 1 166 PRO 166 270 270 PRO PRO A . n A 1 167 SER 167 271 271 SER SER A . n A 1 168 SER 168 272 272 SER SER A . n A 1 169 SER 169 273 273 SER SER A . n A 1 170 ALA 170 274 274 ALA ALA A . n A 1 171 ARG 171 275 275 ARG ARG A . n A 1 172 CYS 172 276 276 CYS CYS A . n A 1 173 ALA 173 277 277 ALA ALA A . n A 1 174 GLN 174 278 278 GLN GLN A . n A 1 175 PHE 175 279 279 PHE PHE A . n A 1 176 PRO 176 280 280 PRO PRO A . n A 1 177 ARG 177 281 281 ARG ARG A . n A 1 178 ALA 178 282 282 ALA ALA A . n A 1 179 GLN 179 283 283 GLN GLN A . n A 1 180 ASP 180 284 284 ASP ASP A . n A 1 181 LYS 181 285 285 LYS LYS A . n A 1 182 VAL 182 286 286 VAL VAL A . n A 1 183 HIS 183 287 287 HIS HIS A . n A 1 184 TYR 184 288 288 TYR TYR A . n A 1 185 TYR 185 289 289 TYR TYR A . n A 1 186 ILE 186 290 290 ILE ILE A . n A 1 187 LYS 187 291 291 LYS LYS A . n A 1 188 LEU 188 292 292 LEU LEU A . n A 1 189 LYS 189 293 293 LYS LYS A . n A 1 190 ASP 190 294 294 ASP ASP A . n A 1 191 LEU 191 295 295 LEU LEU A . n A 1 192 ARG 192 296 296 ARG ARG A . n A 1 193 ASP 193 297 297 ASP ASP A . n A 1 194 GLN 194 298 298 GLN GLN A . n A 1 195 LEU 195 299 299 LEU LEU A . n A 1 196 LYS 196 300 300 LYS LYS A . n A 1 197 GLY 197 301 301 GLY GLY A . n A 1 198 ILE 198 302 ? ? ? A . n A 1 199 GLU 199 303 ? ? ? A . n A 1 200 ARG 200 304 ? ? ? A . n A 1 201 ASN 201 305 ? ? ? A . n A 1 202 MET 202 306 ? ? ? A . n A 1 203 ASP 203 307 ? ? ? A . n A 1 204 VAL 204 308 ? ? ? A . n B 2 1 DC 1 1 1 DC DC C . n B 2 2 DA 2 2 2 DA DA C . n B 2 3 DG 3 3 3 DG DG C . n B 2 4 DC 4 4 4 DC DC C . n B 2 5 DT 5 5 5 DT DT C . n B 2 6 DC 6 6 6 DC DC C . n B 2 7 DT 7 7 7 DT DT C . n B 2 8 DG 8 8 8 DG DG C . n B 2 9 DT 9 9 9 DT DT C . n B 2 10 DA 10 10 10 DA DA C . n B 2 11 DC 11 11 11 DC DC C . n B 2 12 DG 12 12 12 DG DG C . n B 2 13 DT 13 13 13 DT DT C . n B 2 14 DG 14 14 14 DG DG C . n B 2 15 DA 15 15 15 DA DA C . n B 2 16 DG 16 16 16 DG DG C . n B 2 17 DC 17 17 17 DC DC C . n B 2 18 DG 18 18 18 DG DG C . n B 2 19 DA 19 19 19 DA DA C . n B 2 20 DT 20 20 20 DT DT C . n B 2 21 DG 21 21 21 DG DG C . n B 2 22 DG 22 22 22 DG DG C . n B 2 23 DA 23 23 23 DA DA C . n B 2 24 DC 24 24 24 DC DC C . n B 2 25 DA 25 25 25 DA DA C . n B 2 26 DG 26 26 26 DG DG C . n B 2 27 DC 27 27 27 DC DC C . n B 2 28 DT 28 28 28 DT DT C . n C 3 1 DA 1 1 1 DA DA D . n C 3 2 DG 2 2 2 DG DG D . n C 3 3 DC 3 3 3 DC DC D . n C 3 4 DT 4 4 4 DT DT D . n C 3 5 DG 5 5 5 DG DG D . n C 3 6 DT 6 6 6 DT DT D . n C 3 7 DC 7 7 7 DC DC D . n C 3 8 DC 8 8 8 DC DC D . n C 3 9 DA 9 9 9 DA DA D . n C 3 10 DT 10 10 10 DT DT D . n C 3 11 DC 11 11 11 DC DC D . n C 3 12 DG 12 12 12 DG DG D . n C 3 13 DC 13 13 13 DC DC D . n C 3 14 DT 14 14 14 DT DT D . n C 3 15 DC 15 15 15 DC DC D . n C 3 16 DA 16 16 16 DA DA D . n C 3 17 ORP 17 17 17 ORP ORP D . y C 3 17 AAB 17 17 17 AAB AAB D . y C 3 18 DG 18 18 18 DG DG D . n C 3 19 DT 19 19 19 DT DT D . n C 3 20 DA 20 20 20 DA DA D . n C 3 21 DC 21 21 21 DC DC D . n C 3 22 DA 22 22 22 DA DA D . n C 3 23 DG 23 23 23 DG DG D . n C 3 24 DA 24 24 24 DA DA D . n C 3 25 DG 25 25 25 DG DG D . n C 3 26 DC 26 26 26 DC DC D . n C 3 27 DT 27 27 27 DT DT D . n C 3 28 DG 28 28 28 DG DG D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 HOH 1 501 501 HOH HOH A . D 4 HOH 2 502 502 HOH HOH A . D 4 HOH 3 503 503 HOH HOH A . D 4 HOH 4 504 504 HOH HOH A . D 4 HOH 5 505 505 HOH HOH A . D 4 HOH 6 506 506 HOH HOH A . D 4 HOH 7 507 507 HOH HOH A . D 4 HOH 8 508 508 HOH HOH A . D 4 HOH 9 509 509 HOH HOH A . D 4 HOH 10 510 510 HOH HOH A . D 4 HOH 11 511 511 HOH HOH A . D 4 HOH 12 512 512 HOH HOH A . D 4 HOH 13 513 513 HOH HOH A . D 4 HOH 14 514 514 HOH HOH A . D 4 HOH 15 515 515 HOH HOH A . D 4 HOH 16 516 516 HOH HOH A . D 4 HOH 17 517 517 HOH HOH A . D 4 HOH 18 518 518 HOH HOH A . D 4 HOH 19 519 519 HOH HOH A . D 4 HOH 20 520 520 HOH HOH A . D 4 HOH 21 521 521 HOH HOH A . D 4 HOH 22 522 522 HOH HOH A . D 4 HOH 23 523 523 HOH HOH A . D 4 HOH 24 524 524 HOH HOH A . D 4 HOH 25 525 525 HOH HOH A . D 4 HOH 26 526 526 HOH HOH A . D 4 HOH 27 527 527 HOH HOH A . D 4 HOH 28 528 528 HOH HOH A . D 4 HOH 29 529 529 HOH HOH A . D 4 HOH 30 530 530 HOH HOH A . D 4 HOH 31 531 531 HOH HOH A . D 4 HOH 32 532 532 HOH HOH A . D 4 HOH 33 533 533 HOH HOH A . D 4 HOH 34 534 534 HOH HOH A . D 4 HOH 35 535 535 HOH HOH A . D 4 HOH 36 536 536 HOH HOH A . D 4 HOH 37 537 537 HOH HOH A . D 4 HOH 38 538 538 HOH HOH A . D 4 HOH 39 539 539 HOH HOH A . D 4 HOH 40 540 540 HOH HOH A . D 4 HOH 41 541 541 HOH HOH A . D 4 HOH 42 542 542 HOH HOH A . D 4 HOH 43 543 543 HOH HOH A . D 4 HOH 44 544 544 HOH HOH A . D 4 HOH 45 545 545 HOH HOH A . D 4 HOH 46 546 546 HOH HOH A . D 4 HOH 47 547 547 HOH HOH A . D 4 HOH 48 548 548 HOH HOH A . D 4 HOH 49 549 549 HOH HOH A . D 4 HOH 50 550 550 HOH HOH A . D 4 HOH 51 551 551 HOH HOH A . D 4 HOH 52 552 552 HOH HOH A . D 4 HOH 53 553 553 HOH HOH A . D 4 HOH 54 554 554 HOH HOH A . D 4 HOH 55 555 555 HOH HOH A . D 4 HOH 56 556 556 HOH HOH A . D 4 HOH 57 557 557 HOH HOH A . D 4 HOH 58 558 558 HOH HOH A . D 4 HOH 59 559 559 HOH HOH A . D 4 HOH 60 560 560 HOH HOH A . D 4 HOH 61 561 561 HOH HOH A . D 4 HOH 62 562 562 HOH HOH A . D 4 HOH 63 563 563 HOH HOH A . D 4 HOH 64 564 564 HOH HOH A . D 4 HOH 65 565 565 HOH HOH A . D 4 HOH 66 566 566 HOH HOH A . D 4 HOH 67 567 567 HOH HOH A . D 4 HOH 68 568 568 HOH HOH A . D 4 HOH 69 569 569 HOH HOH A . D 4 HOH 70 570 570 HOH HOH A . D 4 HOH 71 571 571 HOH HOH A . D 4 HOH 72 572 572 HOH HOH A . D 4 HOH 73 573 573 HOH HOH A . D 4 HOH 74 574 574 HOH HOH A . D 4 HOH 75 575 575 HOH HOH A . D 4 HOH 76 576 576 HOH HOH A . D 4 HOH 77 577 577 HOH HOH A . D 4 HOH 78 578 578 HOH HOH A . D 4 HOH 79 579 579 HOH HOH A . D 4 HOH 80 580 580 HOH HOH A . D 4 HOH 81 581 581 HOH HOH A . D 4 HOH 82 582 582 HOH HOH A . D 4 HOH 83 583 583 HOH HOH A . D 4 HOH 84 584 584 HOH HOH A . D 4 HOH 85 585 585 HOH HOH A . D 4 HOH 86 586 586 HOH HOH A . D 4 HOH 87 587 587 HOH HOH A . D 4 HOH 88 588 588 HOH HOH A . D 4 HOH 89 589 589 HOH HOH A . D 4 HOH 90 590 590 HOH HOH A . D 4 HOH 91 591 591 HOH HOH A . D 4 HOH 92 592 592 HOH HOH A . D 4 HOH 93 593 593 HOH HOH A . D 4 HOH 94 594 594 HOH HOH A . D 4 HOH 95 595 595 HOH HOH A . D 4 HOH 96 596 596 HOH HOH A . D 4 HOH 97 597 597 HOH HOH A . D 4 HOH 98 598 598 HOH HOH A . D 4 HOH 99 599 599 HOH HOH A . D 4 HOH 100 600 600 HOH HOH A . D 4 HOH 101 601 601 HOH HOH A . D 4 HOH 102 602 602 HOH HOH A . D 4 HOH 103 603 603 HOH HOH A . D 4 HOH 104 604 604 HOH HOH A . D 4 HOH 105 605 605 HOH HOH A . D 4 HOH 106 606 606 HOH HOH A . E 4 HOH 1 101 101 HOH HOH C . E 4 HOH 2 102 102 HOH HOH C . E 4 HOH 3 103 103 HOH HOH C . E 4 HOH 4 104 104 HOH HOH C . E 4 HOH 5 105 105 HOH HOH C . E 4 HOH 6 106 106 HOH HOH C . E 4 HOH 7 107 107 HOH HOH C . E 4 HOH 8 108 108 HOH HOH C . E 4 HOH 9 109 109 HOH HOH C . E 4 HOH 10 110 110 HOH HOH C . E 4 HOH 11 111 111 HOH HOH C . E 4 HOH 12 112 112 HOH HOH C . E 4 HOH 13 113 113 HOH HOH C . E 4 HOH 14 114 114 HOH HOH C . E 4 HOH 15 115 115 HOH HOH C . E 4 HOH 16 116 116 HOH HOH C . E 4 HOH 17 117 117 HOH HOH C . E 4 HOH 18 118 118 HOH HOH C . E 4 HOH 19 119 119 HOH HOH C . E 4 HOH 20 120 120 HOH HOH C . E 4 HOH 21 121 121 HOH HOH C . E 4 HOH 22 122 122 HOH HOH C . E 4 HOH 23 123 123 HOH HOH C . E 4 HOH 24 124 124 HOH HOH C . E 4 HOH 25 125 125 HOH HOH C . E 4 HOH 26 126 126 HOH HOH C . E 4 HOH 27 127 127 HOH HOH C . E 4 HOH 28 128 128 HOH HOH C . E 4 HOH 29 129 129 HOH HOH C . E 4 HOH 30 130 130 HOH HOH C . E 4 HOH 31 131 131 HOH HOH C . E 4 HOH 32 132 132 HOH HOH C . E 4 HOH 33 133 133 HOH HOH C . F 4 HOH 1 201 201 HOH HOH D . F 4 HOH 2 202 202 HOH HOH D . F 4 HOH 3 203 203 HOH HOH D . F 4 HOH 4 204 204 HOH HOH D . F 4 HOH 5 205 205 HOH HOH D . F 4 HOH 6 206 206 HOH HOH D . F 4 HOH 7 207 207 HOH HOH D . F 4 HOH 8 208 208 HOH HOH D . F 4 HOH 9 209 209 HOH HOH D . F 4 HOH 10 210 210 HOH HOH D . F 4 HOH 11 211 211 HOH HOH D . F 4 HOH 12 212 212 HOH HOH D . F 4 HOH 13 213 213 HOH HOH D . F 4 HOH 14 214 214 HOH HOH D . F 4 HOH 15 215 215 HOH HOH D . F 4 HOH 16 216 216 HOH HOH D . F 4 HOH 17 217 217 HOH HOH D . F 4 HOH 18 218 218 HOH HOH D . F 4 HOH 19 219 219 HOH HOH D . F 4 HOH 20 220 220 HOH HOH D . F 4 HOH 21 221 221 HOH HOH D . F 4 HOH 22 222 222 HOH HOH D . F 4 HOH 23 223 223 HOH HOH D . F 4 HOH 24 224 224 HOH HOH D . F 4 HOH 25 225 225 HOH HOH D . F 4 HOH 26 226 226 HOH HOH D . F 4 HOH 27 227 227 HOH HOH D . F 4 HOH 28 228 228 HOH HOH D . F 4 HOH 29 229 229 HOH HOH D . F 4 HOH 30 230 230 HOH HOH D . F 4 HOH 31 231 231 HOH HOH D . F 4 HOH 32 232 232 HOH HOH D . F 4 HOH 33 233 233 HOH HOH D . F 4 HOH 34 234 234 HOH HOH D . F 4 HOH 35 235 235 HOH HOH D . F 4 HOH 36 236 236 HOH HOH D . F 4 HOH 37 237 237 HOH HOH D . F 4 HOH 38 238 238 HOH HOH D . F 4 HOH 39 239 239 HOH HOH D . F 4 HOH 40 240 240 HOH HOH D . F 4 HOH 41 241 241 HOH HOH D . F 4 HOH 42 242 242 HOH HOH D . F 4 HOH 43 243 243 HOH HOH D . F 4 HOH 44 244 244 HOH HOH D . F 4 HOH 45 245 245 HOH HOH D . F 4 HOH 46 246 246 HOH HOH D . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 6140 ? 1 MORE -27 ? 1 'SSA (A^2)' 17500 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-09-16 2 'Structure model' 1 1 2015-09-30 3 'Structure model' 1 2 2015-11-11 4 'Structure model' 1 3 2017-09-13 5 'Structure model' 1 4 2019-12-25 6 'Structure model' 1 5 2023-09-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Author supporting evidence' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 5 'Structure model' 'Author supporting evidence' 7 6 'Structure model' 'Data collection' 8 6 'Structure model' 'Database references' 9 6 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' citation 2 4 'Structure model' pdbx_audit_support 3 4 'Structure model' pdbx_struct_oper_list 4 5 'Structure model' pdbx_audit_support 5 6 'Structure model' chem_comp_atom 6 6 'Structure model' chem_comp_bond 7 6 'Structure model' database_2 8 6 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_citation.journal_id_CSD' 2 4 'Structure model' '_pdbx_audit_support.funding_organization' 3 4 'Structure model' '_pdbx_struct_oper_list.symmetry_operation' 4 5 'Structure model' '_pdbx_audit_support.funding_organization' 5 6 'Structure model' '_database_2.pdbx_DOI' 6 6 'Structure model' '_database_2.pdbx_database_accession' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 28.6568 -12.4548 37.0737 0.4579 0.1910 0.2329 0.0305 -0.0390 0.1141 9.5868 3.4374 9.6659 3.5335 3.7274 9.4204 0.0213 0.4206 0.9440 -0.2345 0.2831 -0.1405 -0.7212 0.5797 -0.3044 'X-RAY DIFFRACTION' 2 ? refined 11.8307 -11.4054 24.3755 0.2578 0.0728 0.2062 -0.0312 -0.0192 -0.0418 3.7934 2.7974 4.0453 -0.0988 1.5269 -0.4402 0.2635 0.1214 -0.4288 0.0926 -0.2224 0.3649 0.4843 0.0646 -0.0411 'X-RAY DIFFRACTION' 3 ? refined 13.1978 -4.5254 34.0760 0.2523 0.0435 0.1092 -0.0212 0.0011 -0.0080 3.7940 5.7949 2.6263 -2.4354 0.7074 -0.9943 -0.1499 -0.1899 -0.0239 0.6854 0.0259 0.2829 0.0816 0.0139 0.1240 'X-RAY DIFFRACTION' 4 ? refined 6.9640 -5.8110 39.4347 0.3624 0.1528 0.1890 -0.0229 0.0959 0.0551 13.5469 6.3907 8.8057 -1.9185 -0.9909 2.7809 -0.2350 -0.6457 -0.3133 0.3691 0.1603 0.5712 0.4606 -0.2039 0.0747 'X-RAY DIFFRACTION' 5 ? refined 9.5899 -9.4531 26.9492 0.2853 0.0936 0.2281 -0.0483 0.0202 -0.0396 3.4249 2.9928 5.2321 -0.4663 -1.0411 -0.7462 -0.0529 0.0218 -0.1898 0.2667 -0.1335 0.5352 0.4251 -0.1890 0.1864 'X-RAY DIFFRACTION' 6 ? refined 19.4153 -7.3952 12.9549 0.3034 0.2203 0.0192 0.0476 -0.0141 -0.0102 10.8689 6.7444 4.4930 4.3669 0.7970 -0.5581 0.1768 0.0600 -0.3450 -0.4480 -0.4067 -0.3091 0.4901 0.7733 0.2299 'X-RAY DIFFRACTION' 7 ? refined 7.5010 0.5603 13.9443 0.2269 0.1060 0.1243 -0.0022 -0.1406 -0.0483 1.8872 5.5736 3.3207 -1.4484 0.2280 -0.3341 0.0447 0.2654 -0.0303 -0.5813 -0.2292 0.4998 -0.0208 -0.1588 0.1845 'X-RAY DIFFRACTION' 8 ? refined 8.6485 6.8646 28.3123 0.1483 -0.0031 0.1234 0.0353 -0.0366 -0.0667 3.6692 1.8399 2.7277 -1.7355 1.3728 -0.8636 -0.1505 -0.1318 -0.0676 0.2428 -0.0340 0.3877 -0.2658 -0.2412 0.1845 'X-RAY DIFFRACTION' 9 ? refined 28.1257 9.2292 19.4267 0.3864 0.3451 0.1496 -0.1541 -0.0701 0.1407 3.3620 3.4266 14.5585 1.3770 -2.9488 -4.1232 -0.3050 0.8210 0.3500 -0.7167 0.1943 -0.2702 0.2595 0.4740 0.1107 'X-RAY DIFFRACTION' 10 ? refined 35.5904 -5.7162 62.1753 0.4783 0.1646 0.1803 -0.0190 -0.2304 0.0243 1.1975 4.4745 15.0205 0.2974 3.0794 -2.8056 0.2534 -0.1284 -0.0933 0.7695 -0.1634 -0.3104 -0.9310 0.4086 -0.0900 'X-RAY DIFFRACTION' 11 ? refined 35.7086 -3.4182 57.5504 0.4899 0.1176 0.2172 -0.0179 -0.1579 0.0085 2.2761 3.5270 8.1248 0.2478 0.1455 -2.4809 0.2606 0.0462 0.0731 0.8483 -0.0945 -0.2829 -0.8591 0.5135 -0.1660 'X-RAY DIFFRACTION' 12 ? refined 28.6634 9.2171 12.2948 0.5966 0.4593 0.1876 -0.0875 0.0353 0.1632 1.9870 0.0958 11.0460 1.7257 -3.1768 -2.3664 0.1624 0.3417 0.2071 -0.9689 -0.1581 0.0580 -0.2930 1.2237 -0.0043 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? '{ A|105 - A|116 }' 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? '{ A|117 - A|142 }' 'X-RAY DIFFRACTION' 3 3 ? ? ? ? ? ? ? ? ? '{ A|143 - A|169 }' 'X-RAY DIFFRACTION' 4 4 ? ? ? ? ? ? ? ? ? '{ A|170 - A|176 }' 'X-RAY DIFFRACTION' 5 5 ? ? ? ? ? ? ? ? ? '{ A|177 - A|198 }' 'X-RAY DIFFRACTION' 6 6 ? ? ? ? ? ? ? ? ? '{ A|199 - A|216 }' 'X-RAY DIFFRACTION' 7 7 ? ? ? ? ? ? ? ? ? '{ A|217 - A|269 }' 'X-RAY DIFFRACTION' 8 8 ? ? ? ? ? ? ? ? ? '{ A|270 - A|300 }' 'X-RAY DIFFRACTION' 9 9 ? ? ? ? ? ? ? ? ? '{ C|1 - C|16 }' 'X-RAY DIFFRACTION' 10 10 ? ? ? ? ? ? ? ? ? '{ C|17 - C|28 }' 'X-RAY DIFFRACTION' 11 11 ? ? ? ? ? ? ? ? ? '{ D|1 - D|15 }' 'X-RAY DIFFRACTION' 12 12 ? ? ? ? ? ? ? ? ? '{ D|16 - D|28 }' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? BUSTER-TNT ? ? ? 2.10.2 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? 0.5.4 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.15 3 ? 'data collection' ? ? ? ? ? ? ? ? ? ? ? Blu-Ice ? ? ? . 4 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 5 ? 'model building' ? ? ? ? ? ? ? ? ? ? ? Coot ? ? ? . 6 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 7 # _pdbx_entry_details.compound_details ? _pdbx_entry_details.entry_id 4Z3A _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;Microheterogeneity at residues 17 in chain D, this structure contains both anomeric forms of the abasic nucleotide, ORP and AAB at 0.5 occupancy. ; _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 "O3'" C DG 16 ? ? "C3'" C DG 16 ? ? 1.378 1.419 -0.041 0.006 N 2 1 "O3'" D DC 8 ? ? "C3'" D DC 8 ? ? 1.368 1.419 -0.051 0.006 N 3 1 "O3'" D DA 16 ? ? P D AAB 17 ? B 1.489 1.607 -0.118 0.012 Y 4 1 "O3'" D DT 19 ? ? "C3'" D DT 19 ? ? 1.378 1.419 -0.041 0.006 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" C DG 3 ? ? "C1'" C DG 3 ? ? N9 C DG 3 ? ? 110.36 108.30 2.06 0.30 N 2 1 "O4'" C DC 4 ? ? "C1'" C DC 4 ? ? N1 C DC 4 ? ? 110.99 108.30 2.69 0.30 N 3 1 "O4'" C DT 28 ? ? "C1'" C DT 28 ? ? N1 C DT 28 ? ? 110.56 108.30 2.26 0.30 N 4 1 "O4'" D DC 13 ? ? "C1'" D DC 13 ? ? N1 D DC 13 ? ? 111.64 108.30 3.34 0.30 N 5 1 "O4'" D DC 15 ? ? "C1'" D DC 15 ? ? N1 D DC 15 ? ? 110.23 108.30 1.93 0.30 N 6 1 "C3'" D DA 16 ? ? "O3'" D DA 16 ? ? P D AAB 17 ? B 127.63 119.70 7.93 1.20 Y 7 1 "O4'" D DG 23 ? ? "C1'" D DG 23 ? ? N9 D DG 23 ? ? 110.75 108.30 2.45 0.30 N 8 1 "O4'" D DT 27 ? ? "C1'" D DT 27 ? ? N1 D DT 27 ? ? 110.16 108.30 1.86 0.30 N # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A MET 108 ? CG ? A MET 4 CG 2 1 Y 1 A MET 108 ? SD ? A MET 4 SD 3 1 Y 1 A MET 108 ? CE ? A MET 4 CE 4 1 Y 1 A LYS 248 ? CG ? A LYS 144 CG 5 1 Y 1 A LYS 248 ? CD ? A LYS 144 CD 6 1 Y 1 A LYS 248 ? CE ? A LYS 144 CE 7 1 Y 1 A LYS 248 ? NZ ? A LYS 144 NZ 8 1 Y 1 A ASN 249 ? CG ? A ASN 145 CG 9 1 Y 1 A ASN 249 ? OD1 ? A ASN 145 OD1 10 1 Y 1 A ASN 249 ? ND2 ? A ASN 145 ND2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ILE 302 ? A ILE 198 2 1 Y 1 A GLU 303 ? A GLU 199 3 1 Y 1 A ARG 304 ? A ARG 200 4 1 Y 1 A ASN 305 ? A ASN 201 5 1 Y 1 A MET 306 ? A MET 202 6 1 Y 1 A ASP 307 ? A ASP 203 7 1 Y 1 A VAL 308 ? A VAL 204 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal AAB P P N N 1 AAB O1P O N N 2 AAB O2P O N N 3 AAB O3P O N N 4 AAB "O5'" O N N 5 AAB "C5'" C N N 6 AAB "C4'" C N R 7 AAB "O4'" O N N 8 AAB "C1'" C N R 9 AAB "O1'" O N N 10 AAB "C2'" C N N 11 AAB "C3'" C N S 12 AAB "O3'" O N N 13 AAB H1P H N N 14 AAB H3P H N N 15 AAB "H5'1" H N N 16 AAB "H5'2" H N N 17 AAB "H4'" H N N 18 AAB "H1'" H N N 19 AAB "HO1'" H N N 20 AAB "H2'1" H N N 21 AAB "H2'2" H N N 22 AAB "H3'" H N N 23 AAB "HO3'" H N N 24 ALA N N N N 25 ALA CA C N S 26 ALA C C N N 27 ALA O O N N 28 ALA CB C N N 29 ALA OXT O N N 30 ALA H H N N 31 ALA H2 H N N 32 ALA HA H N N 33 ALA HB1 H N N 34 ALA HB2 H N N 35 ALA HB3 H N N 36 ALA HXT H N N 37 ARG N N N N 38 ARG CA C N S 39 ARG C C N N 40 ARG O O N N 41 ARG CB C N N 42 ARG CG C N N 43 ARG CD C N N 44 ARG NE N N N 45 ARG CZ C N N 46 ARG NH1 N N N 47 ARG NH2 N N N 48 ARG OXT O N N 49 ARG H H N N 50 ARG H2 H N N 51 ARG HA H N N 52 ARG HB2 H N N 53 ARG HB3 H N N 54 ARG HG2 H N N 55 ARG HG3 H N N 56 ARG HD2 H N N 57 ARG HD3 H N N 58 ARG HE H N N 59 ARG HH11 H N N 60 ARG HH12 H N N 61 ARG HH21 H N N 62 ARG HH22 H N N 63 ARG HXT H N N 64 ASN N N N N 65 ASN CA C N S 66 ASN C C N N 67 ASN O O N N 68 ASN CB C N N 69 ASN CG C N N 70 ASN OD1 O N N 71 ASN ND2 N N N 72 ASN OXT O N N 73 ASN H H N N 74 ASN H2 H N N 75 ASN HA H N N 76 ASN HB2 H N N 77 ASN HB3 H N N 78 ASN HD21 H N N 79 ASN HD22 H N N 80 ASN HXT H N N 81 ASP N N N N 82 ASP CA C N S 83 ASP C C N N 84 ASP O O N N 85 ASP CB C N N 86 ASP CG C N N 87 ASP OD1 O N N 88 ASP OD2 O N N 89 ASP OXT O N N 90 ASP H H N N 91 ASP H2 H N N 92 ASP HA H N N 93 ASP HB2 H N N 94 ASP HB3 H N N 95 ASP HD2 H N N 96 ASP HXT H N N 97 CYS N N N N 98 CYS CA C N R 99 CYS C C N N 100 CYS O O N N 101 CYS CB C N N 102 CYS SG S N N 103 CYS OXT O N N 104 CYS H H N N 105 CYS H2 H N N 106 CYS HA H N N 107 CYS HB2 H N N 108 CYS HB3 H N N 109 CYS HG H N N 110 CYS HXT H N N 111 DA OP3 O N N 112 DA P P N N 113 DA OP1 O N N 114 DA OP2 O N N 115 DA "O5'" O N N 116 DA "C5'" C N N 117 DA "C4'" C N R 118 DA "O4'" O N N 119 DA "C3'" C N S 120 DA "O3'" O N N 121 DA "C2'" C N N 122 DA "C1'" C N R 123 DA N9 N Y N 124 DA C8 C Y N 125 DA N7 N Y N 126 DA C5 C Y N 127 DA C6 C Y N 128 DA N6 N N N 129 DA N1 N Y N 130 DA C2 C Y N 131 DA N3 N Y N 132 DA C4 C Y N 133 DA HOP3 H N N 134 DA HOP2 H N N 135 DA "H5'" H N N 136 DA "H5''" H N N 137 DA "H4'" H N N 138 DA "H3'" H N N 139 DA "HO3'" H N N 140 DA "H2'" H N N 141 DA "H2''" H N N 142 DA "H1'" H N N 143 DA H8 H N N 144 DA H61 H N N 145 DA H62 H N N 146 DA H2 H N N 147 DC OP3 O N N 148 DC P P N N 149 DC OP1 O N N 150 DC OP2 O N N 151 DC "O5'" O N N 152 DC "C5'" C N N 153 DC "C4'" C N R 154 DC "O4'" O N N 155 DC "C3'" C N S 156 DC "O3'" O N N 157 DC "C2'" C N N 158 DC "C1'" C N R 159 DC N1 N N N 160 DC C2 C N N 161 DC O2 O N N 162 DC N3 N N N 163 DC C4 C N N 164 DC N4 N N N 165 DC C5 C N N 166 DC C6 C N N 167 DC HOP3 H N N 168 DC HOP2 H N N 169 DC "H5'" H N N 170 DC "H5''" H N N 171 DC "H4'" H N N 172 DC "H3'" H N N 173 DC "HO3'" H N N 174 DC "H2'" H N N 175 DC "H2''" H N N 176 DC "H1'" H N N 177 DC H41 H N N 178 DC H42 H N N 179 DC H5 H N N 180 DC H6 H N N 181 DG OP3 O N N 182 DG P P N N 183 DG OP1 O N N 184 DG OP2 O N N 185 DG "O5'" O N N 186 DG "C5'" C N N 187 DG "C4'" C N R 188 DG "O4'" O N N 189 DG "C3'" C N S 190 DG "O3'" O N N 191 DG "C2'" C N N 192 DG "C1'" C N R 193 DG N9 N Y N 194 DG C8 C Y N 195 DG N7 N Y N 196 DG C5 C Y N 197 DG C6 C N N 198 DG O6 O N N 199 DG N1 N N N 200 DG C2 C N N 201 DG N2 N N N 202 DG N3 N N N 203 DG C4 C Y N 204 DG HOP3 H N N 205 DG HOP2 H N N 206 DG "H5'" H N N 207 DG "H5''" H N N 208 DG "H4'" H N N 209 DG "H3'" H N N 210 DG "HO3'" H N N 211 DG "H2'" H N N 212 DG "H2''" H N N 213 DG "H1'" H N N 214 DG H8 H N N 215 DG H1 H N N 216 DG H21 H N N 217 DG H22 H N N 218 DT OP3 O N N 219 DT P P N N 220 DT OP1 O N N 221 DT OP2 O N N 222 DT "O5'" O N N 223 DT "C5'" C N N 224 DT "C4'" C N R 225 DT "O4'" O N N 226 DT "C3'" C N S 227 DT "O3'" O N N 228 DT "C2'" C N N 229 DT "C1'" C N R 230 DT N1 N N N 231 DT C2 C N N 232 DT O2 O N N 233 DT N3 N N N 234 DT C4 C N N 235 DT O4 O N N 236 DT C5 C N N 237 DT C7 C N N 238 DT C6 C N N 239 DT HOP3 H N N 240 DT HOP2 H N N 241 DT "H5'" H N N 242 DT "H5''" H N N 243 DT "H4'" H N N 244 DT "H3'" H N N 245 DT "HO3'" H N N 246 DT "H2'" H N N 247 DT "H2''" H N N 248 DT "H1'" H N N 249 DT H3 H N N 250 DT H71 H N N 251 DT H72 H N N 252 DT H73 H N N 253 DT H6 H N N 254 GLN N N N N 255 GLN CA C N S 256 GLN C C N N 257 GLN O O N N 258 GLN CB C N N 259 GLN CG C N N 260 GLN CD C N N 261 GLN OE1 O N N 262 GLN NE2 N N N 263 GLN OXT O N N 264 GLN H H N N 265 GLN H2 H N N 266 GLN HA H N N 267 GLN HB2 H N N 268 GLN HB3 H N N 269 GLN HG2 H N N 270 GLN HG3 H N N 271 GLN HE21 H N N 272 GLN HE22 H N N 273 GLN HXT H N N 274 GLU N N N N 275 GLU CA C N S 276 GLU C C N N 277 GLU O O N N 278 GLU CB C N N 279 GLU CG C N N 280 GLU CD C N N 281 GLU OE1 O N N 282 GLU OE2 O N N 283 GLU OXT O N N 284 GLU H H N N 285 GLU H2 H N N 286 GLU HA H N N 287 GLU HB2 H N N 288 GLU HB3 H N N 289 GLU HG2 H N N 290 GLU HG3 H N N 291 GLU HE2 H N N 292 GLU HXT H N N 293 GLY N N N N 294 GLY CA C N N 295 GLY C C N N 296 GLY O O N N 297 GLY OXT O N N 298 GLY H H N N 299 GLY H2 H N N 300 GLY HA2 H N N 301 GLY HA3 H N N 302 GLY HXT H N N 303 HIS N N N N 304 HIS CA C N S 305 HIS C C N N 306 HIS O O N N 307 HIS CB C N N 308 HIS CG C Y N 309 HIS ND1 N Y N 310 HIS CD2 C Y N 311 HIS CE1 C Y N 312 HIS NE2 N Y N 313 HIS OXT O N N 314 HIS H H N N 315 HIS H2 H N N 316 HIS HA H N N 317 HIS HB2 H N N 318 HIS HB3 H N N 319 HIS HD1 H N N 320 HIS HD2 H N N 321 HIS HE1 H N N 322 HIS HE2 H N N 323 HIS HXT H N N 324 HOH O O N N 325 HOH H1 H N N 326 HOH H2 H N N 327 ILE N N N N 328 ILE CA C N S 329 ILE C C N N 330 ILE O O N N 331 ILE CB C N S 332 ILE CG1 C N N 333 ILE CG2 C N N 334 ILE CD1 C N N 335 ILE OXT O N N 336 ILE H H N N 337 ILE H2 H N N 338 ILE HA H N N 339 ILE HB H N N 340 ILE HG12 H N N 341 ILE HG13 H N N 342 ILE HG21 H N N 343 ILE HG22 H N N 344 ILE HG23 H N N 345 ILE HD11 H N N 346 ILE HD12 H N N 347 ILE HD13 H N N 348 ILE HXT H N N 349 LEU N N N N 350 LEU CA C N S 351 LEU C C N N 352 LEU O O N N 353 LEU CB C N N 354 LEU CG C N N 355 LEU CD1 C N N 356 LEU CD2 C N N 357 LEU OXT O N N 358 LEU H H N N 359 LEU H2 H N N 360 LEU HA H N N 361 LEU HB2 H N N 362 LEU HB3 H N N 363 LEU HG H N N 364 LEU HD11 H N N 365 LEU HD12 H N N 366 LEU HD13 H N N 367 LEU HD21 H N N 368 LEU HD22 H N N 369 LEU HD23 H N N 370 LEU HXT H N N 371 LYS N N N N 372 LYS CA C N S 373 LYS C C N N 374 LYS O O N N 375 LYS CB C N N 376 LYS CG C N N 377 LYS CD C N N 378 LYS CE C N N 379 LYS NZ N N N 380 LYS OXT O N N 381 LYS H H N N 382 LYS H2 H N N 383 LYS HA H N N 384 LYS HB2 H N N 385 LYS HB3 H N N 386 LYS HG2 H N N 387 LYS HG3 H N N 388 LYS HD2 H N N 389 LYS HD3 H N N 390 LYS HE2 H N N 391 LYS HE3 H N N 392 LYS HZ1 H N N 393 LYS HZ2 H N N 394 LYS HZ3 H N N 395 LYS HXT H N N 396 MET N N N N 397 MET CA C N S 398 MET C C N N 399 MET O O N N 400 MET CB C N N 401 MET CG C N N 402 MET SD S N N 403 MET CE C N N 404 MET OXT O N N 405 MET H H N N 406 MET H2 H N N 407 MET HA H N N 408 MET HB2 H N N 409 MET HB3 H N N 410 MET HG2 H N N 411 MET HG3 H N N 412 MET HE1 H N N 413 MET HE2 H N N 414 MET HE3 H N N 415 MET HXT H N N 416 ORP C1 C N S 417 ORP O1 O N N 418 ORP C2 C N N 419 ORP C3 C N S 420 ORP O3 O N N 421 ORP C4 C N R 422 ORP O4 O N N 423 ORP C5 C N N 424 ORP O5 O N N 425 ORP P P N N 426 ORP O1P O N N 427 ORP O2P O N N 428 ORP O3P O N N 429 ORP H1 H N N 430 ORP HO1 H N N 431 ORP H21 H N N 432 ORP H22 H N N 433 ORP H3 H N N 434 ORP HO3 H N N 435 ORP H4 H N N 436 ORP H51 H N N 437 ORP H52 H N N 438 ORP HOP2 H N N 439 ORP HOP3 H N N 440 PHE N N N N 441 PHE CA C N S 442 PHE C C N N 443 PHE O O N N 444 PHE CB C N N 445 PHE CG C Y N 446 PHE CD1 C Y N 447 PHE CD2 C Y N 448 PHE CE1 C Y N 449 PHE CE2 C Y N 450 PHE CZ C Y N 451 PHE OXT O N N 452 PHE H H N N 453 PHE H2 H N N 454 PHE HA H N N 455 PHE HB2 H N N 456 PHE HB3 H N N 457 PHE HD1 H N N 458 PHE HD2 H N N 459 PHE HE1 H N N 460 PHE HE2 H N N 461 PHE HZ H N N 462 PHE HXT H N N 463 PRO N N N N 464 PRO CA C N S 465 PRO C C N N 466 PRO O O N N 467 PRO CB C N N 468 PRO CG C N N 469 PRO CD C N N 470 PRO OXT O N N 471 PRO H H N N 472 PRO HA H N N 473 PRO HB2 H N N 474 PRO HB3 H N N 475 PRO HG2 H N N 476 PRO HG3 H N N 477 PRO HD2 H N N 478 PRO HD3 H N N 479 PRO HXT H N N 480 SER N N N N 481 SER CA C N S 482 SER C C N N 483 SER O O N N 484 SER CB C N N 485 SER OG O N N 486 SER OXT O N N 487 SER H H N N 488 SER H2 H N N 489 SER HA H N N 490 SER HB2 H N N 491 SER HB3 H N N 492 SER HG H N N 493 SER HXT H N N 494 THR N N N N 495 THR CA C N S 496 THR C C N N 497 THR O O N N 498 THR CB C N R 499 THR OG1 O N N 500 THR CG2 C N N 501 THR OXT O N N 502 THR H H N N 503 THR H2 H N N 504 THR HA H N N 505 THR HB H N N 506 THR HG1 H N N 507 THR HG21 H N N 508 THR HG22 H N N 509 THR HG23 H N N 510 THR HXT H N N 511 TRP N N N N 512 TRP CA C N S 513 TRP C C N N 514 TRP O O N N 515 TRP CB C N N 516 TRP CG C Y N 517 TRP CD1 C Y N 518 TRP CD2 C Y N 519 TRP NE1 N Y N 520 TRP CE2 C Y N 521 TRP CE3 C Y N 522 TRP CZ2 C Y N 523 TRP CZ3 C Y N 524 TRP CH2 C Y N 525 TRP OXT O N N 526 TRP H H N N 527 TRP H2 H N N 528 TRP HA H N N 529 TRP HB2 H N N 530 TRP HB3 H N N 531 TRP HD1 H N N 532 TRP HE1 H N N 533 TRP HE3 H N N 534 TRP HZ2 H N N 535 TRP HZ3 H N N 536 TRP HH2 H N N 537 TRP HXT H N N 538 TYR N N N N 539 TYR CA C N S 540 TYR C C N N 541 TYR O O N N 542 TYR CB C N N 543 TYR CG C Y N 544 TYR CD1 C Y N 545 TYR CD2 C Y N 546 TYR CE1 C Y N 547 TYR CE2 C Y N 548 TYR CZ C Y N 549 TYR OH O N N 550 TYR OXT O N N 551 TYR H H N N 552 TYR H2 H N N 553 TYR HA H N N 554 TYR HB2 H N N 555 TYR HB3 H N N 556 TYR HD1 H N N 557 TYR HD2 H N N 558 TYR HE1 H N N 559 TYR HE2 H N N 560 TYR HH H N N 561 TYR HXT H N N 562 VAL N N N N 563 VAL CA C N S 564 VAL C C N N 565 VAL O O N N 566 VAL CB C N N 567 VAL CG1 C N N 568 VAL CG2 C N N 569 VAL OXT O N N 570 VAL H H N N 571 VAL H2 H N N 572 VAL HA H N N 573 VAL HB H N N 574 VAL HG11 H N N 575 VAL HG12 H N N 576 VAL HG13 H N N 577 VAL HG21 H N N 578 VAL HG22 H N N 579 VAL HG23 H N N 580 VAL HXT H N N 581 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal AAB P O1P sing N N 1 AAB P O2P doub N N 2 AAB P O3P sing N N 3 AAB P "O5'" sing N N 4 AAB O1P H1P sing N N 5 AAB O3P H3P sing N N 6 AAB "O5'" "C5'" sing N N 7 AAB "C5'" "C4'" sing N N 8 AAB "C5'" "H5'1" sing N N 9 AAB "C5'" "H5'2" sing N N 10 AAB "C4'" "O4'" sing N N 11 AAB "C4'" "C3'" sing N N 12 AAB "C4'" "H4'" sing N N 13 AAB "O4'" "C1'" sing N N 14 AAB "C1'" "O1'" sing N N 15 AAB "C1'" "C2'" sing N N 16 AAB "C1'" "H1'" sing N N 17 AAB "O1'" "HO1'" sing N N 18 AAB "C2'" "C3'" sing N N 19 AAB "C2'" "H2'1" sing N N 20 AAB "C2'" "H2'2" sing N N 21 AAB "C3'" "O3'" sing N N 22 AAB "C3'" "H3'" sing N N 23 AAB "O3'" "HO3'" sing N N 24 ALA N CA sing N N 25 ALA N H sing N N 26 ALA N H2 sing N N 27 ALA CA C sing N N 28 ALA CA CB sing N N 29 ALA CA HA sing N N 30 ALA C O doub N N 31 ALA C OXT sing N N 32 ALA CB HB1 sing N N 33 ALA CB HB2 sing N N 34 ALA CB HB3 sing N N 35 ALA OXT HXT sing N N 36 ARG N CA sing N N 37 ARG N H sing N N 38 ARG N H2 sing N N 39 ARG CA C sing N N 40 ARG CA CB sing N N 41 ARG CA HA sing N N 42 ARG C O doub N N 43 ARG C OXT sing N N 44 ARG CB CG sing N N 45 ARG CB HB2 sing N N 46 ARG CB HB3 sing N N 47 ARG CG CD sing N N 48 ARG CG HG2 sing N N 49 ARG CG HG3 sing N N 50 ARG CD NE sing N N 51 ARG CD HD2 sing N N 52 ARG CD HD3 sing N N 53 ARG NE CZ sing N N 54 ARG NE HE sing N N 55 ARG CZ NH1 sing N N 56 ARG CZ NH2 doub N N 57 ARG NH1 HH11 sing N N 58 ARG NH1 HH12 sing N N 59 ARG NH2 HH21 sing N N 60 ARG NH2 HH22 sing N N 61 ARG OXT HXT sing N N 62 ASN N CA sing N N 63 ASN N H sing N N 64 ASN N H2 sing N N 65 ASN CA C sing N N 66 ASN CA CB sing N N 67 ASN CA HA sing N N 68 ASN C O doub N N 69 ASN C OXT sing N N 70 ASN CB CG sing N N 71 ASN CB HB2 sing N N 72 ASN CB HB3 sing N N 73 ASN CG OD1 doub N N 74 ASN CG ND2 sing N N 75 ASN ND2 HD21 sing N N 76 ASN ND2 HD22 sing N N 77 ASN OXT HXT sing N N 78 ASP N CA sing N N 79 ASP N H sing N N 80 ASP N H2 sing N N 81 ASP CA C sing N N 82 ASP CA CB sing N N 83 ASP CA HA sing N N 84 ASP C O doub N N 85 ASP C OXT sing N N 86 ASP CB CG sing N N 87 ASP CB HB2 sing N N 88 ASP CB HB3 sing N N 89 ASP CG OD1 doub N N 90 ASP CG OD2 sing N N 91 ASP OD2 HD2 sing N N 92 ASP OXT HXT sing N N 93 CYS N CA sing N N 94 CYS N H sing N N 95 CYS N H2 sing N N 96 CYS CA C sing N N 97 CYS CA CB sing N N 98 CYS CA HA sing N N 99 CYS C O doub N N 100 CYS C OXT sing N N 101 CYS CB SG sing N N 102 CYS CB HB2 sing N N 103 CYS CB HB3 sing N N 104 CYS SG HG sing N N 105 CYS OXT HXT sing N N 106 DA OP3 P sing N N 107 DA OP3 HOP3 sing N N 108 DA P OP1 doub N N 109 DA P OP2 sing N N 110 DA P "O5'" sing N N 111 DA OP2 HOP2 sing N N 112 DA "O5'" "C5'" sing N N 113 DA "C5'" "C4'" sing N N 114 DA "C5'" "H5'" sing N N 115 DA "C5'" "H5''" sing N N 116 DA "C4'" "O4'" sing N N 117 DA "C4'" "C3'" sing N N 118 DA "C4'" "H4'" sing N N 119 DA "O4'" "C1'" sing N N 120 DA "C3'" "O3'" sing N N 121 DA "C3'" "C2'" sing N N 122 DA "C3'" "H3'" sing N N 123 DA "O3'" "HO3'" sing N N 124 DA "C2'" "C1'" sing N N 125 DA "C2'" "H2'" sing N N 126 DA "C2'" "H2''" sing N N 127 DA "C1'" N9 sing N N 128 DA "C1'" "H1'" sing N N 129 DA N9 C8 sing Y N 130 DA N9 C4 sing Y N 131 DA C8 N7 doub Y N 132 DA C8 H8 sing N N 133 DA N7 C5 sing Y N 134 DA C5 C6 sing Y N 135 DA C5 C4 doub Y N 136 DA C6 N6 sing N N 137 DA C6 N1 doub Y N 138 DA N6 H61 sing N N 139 DA N6 H62 sing N N 140 DA N1 C2 sing Y N 141 DA C2 N3 doub Y N 142 DA C2 H2 sing N N 143 DA N3 C4 sing Y N 144 DC OP3 P sing N N 145 DC OP3 HOP3 sing N N 146 DC P OP1 doub N N 147 DC P OP2 sing N N 148 DC P "O5'" sing N N 149 DC OP2 HOP2 sing N N 150 DC "O5'" "C5'" sing N N 151 DC "C5'" "C4'" sing N N 152 DC "C5'" "H5'" sing N N 153 DC "C5'" "H5''" sing N N 154 DC "C4'" "O4'" sing N N 155 DC "C4'" "C3'" sing N N 156 DC "C4'" "H4'" sing N N 157 DC "O4'" "C1'" sing N N 158 DC "C3'" "O3'" sing N N 159 DC "C3'" "C2'" sing N N 160 DC "C3'" "H3'" sing N N 161 DC "O3'" "HO3'" sing N N 162 DC "C2'" "C1'" sing N N 163 DC "C2'" "H2'" sing N N 164 DC "C2'" "H2''" sing N N 165 DC "C1'" N1 sing N N 166 DC "C1'" "H1'" sing N N 167 DC N1 C2 sing N N 168 DC N1 C6 sing N N 169 DC C2 O2 doub N N 170 DC C2 N3 sing N N 171 DC N3 C4 doub N N 172 DC C4 N4 sing N N 173 DC C4 C5 sing N N 174 DC N4 H41 sing N N 175 DC N4 H42 sing N N 176 DC C5 C6 doub N N 177 DC C5 H5 sing N N 178 DC C6 H6 sing N N 179 DG OP3 P sing N N 180 DG OP3 HOP3 sing N N 181 DG P OP1 doub N N 182 DG P OP2 sing N N 183 DG P "O5'" sing N N 184 DG OP2 HOP2 sing N N 185 DG "O5'" "C5'" sing N N 186 DG "C5'" "C4'" sing N N 187 DG "C5'" "H5'" sing N N 188 DG "C5'" "H5''" sing N N 189 DG "C4'" "O4'" sing N N 190 DG "C4'" "C3'" sing N N 191 DG "C4'" "H4'" sing N N 192 DG "O4'" "C1'" sing N N 193 DG "C3'" "O3'" sing N N 194 DG "C3'" "C2'" sing N N 195 DG "C3'" "H3'" sing N N 196 DG "O3'" "HO3'" sing N N 197 DG "C2'" "C1'" sing N N 198 DG "C2'" "H2'" sing N N 199 DG "C2'" "H2''" sing N N 200 DG "C1'" N9 sing N N 201 DG "C1'" "H1'" sing N N 202 DG N9 C8 sing Y N 203 DG N9 C4 sing Y N 204 DG C8 N7 doub Y N 205 DG C8 H8 sing N N 206 DG N7 C5 sing Y N 207 DG C5 C6 sing N N 208 DG C5 C4 doub Y N 209 DG C6 O6 doub N N 210 DG C6 N1 sing N N 211 DG N1 C2 sing N N 212 DG N1 H1 sing N N 213 DG C2 N2 sing N N 214 DG C2 N3 doub N N 215 DG N2 H21 sing N N 216 DG N2 H22 sing N N 217 DG N3 C4 sing N N 218 DT OP3 P sing N N 219 DT OP3 HOP3 sing N N 220 DT P OP1 doub N N 221 DT P OP2 sing N N 222 DT P "O5'" sing N N 223 DT OP2 HOP2 sing N N 224 DT "O5'" "C5'" sing N N 225 DT "C5'" "C4'" sing N N 226 DT "C5'" "H5'" sing N N 227 DT "C5'" "H5''" sing N N 228 DT "C4'" "O4'" sing N N 229 DT "C4'" "C3'" sing N N 230 DT "C4'" "H4'" sing N N 231 DT "O4'" "C1'" sing N N 232 DT "C3'" "O3'" sing N N 233 DT "C3'" "C2'" sing N N 234 DT "C3'" "H3'" sing N N 235 DT "O3'" "HO3'" sing N N 236 DT "C2'" "C1'" sing N N 237 DT "C2'" "H2'" sing N N 238 DT "C2'" "H2''" sing N N 239 DT "C1'" N1 sing N N 240 DT "C1'" "H1'" sing N N 241 DT N1 C2 sing N N 242 DT N1 C6 sing N N 243 DT C2 O2 doub N N 244 DT C2 N3 sing N N 245 DT N3 C4 sing N N 246 DT N3 H3 sing N N 247 DT C4 O4 doub N N 248 DT C4 C5 sing N N 249 DT C5 C7 sing N N 250 DT C5 C6 doub N N 251 DT C7 H71 sing N N 252 DT C7 H72 sing N N 253 DT C7 H73 sing N N 254 DT C6 H6 sing N N 255 GLN N CA sing N N 256 GLN N H sing N N 257 GLN N H2 sing N N 258 GLN CA C sing N N 259 GLN CA CB sing N N 260 GLN CA HA sing N N 261 GLN C O doub N N 262 GLN C OXT sing N N 263 GLN CB CG sing N N 264 GLN CB HB2 sing N N 265 GLN CB HB3 sing N N 266 GLN CG CD sing N N 267 GLN CG HG2 sing N N 268 GLN CG HG3 sing N N 269 GLN CD OE1 doub N N 270 GLN CD NE2 sing N N 271 GLN NE2 HE21 sing N N 272 GLN NE2 HE22 sing N N 273 GLN OXT HXT sing N N 274 GLU N CA sing N N 275 GLU N H sing N N 276 GLU N H2 sing N N 277 GLU CA C sing N N 278 GLU CA CB sing N N 279 GLU CA HA sing N N 280 GLU C O doub N N 281 GLU C OXT sing N N 282 GLU CB CG sing N N 283 GLU CB HB2 sing N N 284 GLU CB HB3 sing N N 285 GLU CG CD sing N N 286 GLU CG HG2 sing N N 287 GLU CG HG3 sing N N 288 GLU CD OE1 doub N N 289 GLU CD OE2 sing N N 290 GLU OE2 HE2 sing N N 291 GLU OXT HXT sing N N 292 GLY N CA sing N N 293 GLY N H sing N N 294 GLY N H2 sing N N 295 GLY CA C sing N N 296 GLY CA HA2 sing N N 297 GLY CA HA3 sing N N 298 GLY C O doub N N 299 GLY C OXT sing N N 300 GLY OXT HXT sing N N 301 HIS N CA sing N N 302 HIS N H sing N N 303 HIS N H2 sing N N 304 HIS CA C sing N N 305 HIS CA CB sing N N 306 HIS CA HA sing N N 307 HIS C O doub N N 308 HIS C OXT sing N N 309 HIS CB CG sing N N 310 HIS CB HB2 sing N N 311 HIS CB HB3 sing N N 312 HIS CG ND1 sing Y N 313 HIS CG CD2 doub Y N 314 HIS ND1 CE1 doub Y N 315 HIS ND1 HD1 sing N N 316 HIS CD2 NE2 sing Y N 317 HIS CD2 HD2 sing N N 318 HIS CE1 NE2 sing Y N 319 HIS CE1 HE1 sing N N 320 HIS NE2 HE2 sing N N 321 HIS OXT HXT sing N N 322 HOH O H1 sing N N 323 HOH O H2 sing N N 324 ILE N CA sing N N 325 ILE N H sing N N 326 ILE N H2 sing N N 327 ILE CA C sing N N 328 ILE CA CB sing N N 329 ILE CA HA sing N N 330 ILE C O doub N N 331 ILE C OXT sing N N 332 ILE CB CG1 sing N N 333 ILE CB CG2 sing N N 334 ILE CB HB sing N N 335 ILE CG1 CD1 sing N N 336 ILE CG1 HG12 sing N N 337 ILE CG1 HG13 sing N N 338 ILE CG2 HG21 sing N N 339 ILE CG2 HG22 sing N N 340 ILE CG2 HG23 sing N N 341 ILE CD1 HD11 sing N N 342 ILE CD1 HD12 sing N N 343 ILE CD1 HD13 sing N N 344 ILE OXT HXT sing N N 345 LEU N CA sing N N 346 LEU N H sing N N 347 LEU N H2 sing N N 348 LEU CA C sing N N 349 LEU CA CB sing N N 350 LEU CA HA sing N N 351 LEU C O doub N N 352 LEU C OXT sing N N 353 LEU CB CG sing N N 354 LEU CB HB2 sing N N 355 LEU CB HB3 sing N N 356 LEU CG CD1 sing N N 357 LEU CG CD2 sing N N 358 LEU CG HG sing N N 359 LEU CD1 HD11 sing N N 360 LEU CD1 HD12 sing N N 361 LEU CD1 HD13 sing N N 362 LEU CD2 HD21 sing N N 363 LEU CD2 HD22 sing N N 364 LEU CD2 HD23 sing N N 365 LEU OXT HXT sing N N 366 LYS N CA sing N N 367 LYS N H sing N N 368 LYS N H2 sing N N 369 LYS CA C sing N N 370 LYS CA CB sing N N 371 LYS CA HA sing N N 372 LYS C O doub N N 373 LYS C OXT sing N N 374 LYS CB CG sing N N 375 LYS CB HB2 sing N N 376 LYS CB HB3 sing N N 377 LYS CG CD sing N N 378 LYS CG HG2 sing N N 379 LYS CG HG3 sing N N 380 LYS CD CE sing N N 381 LYS CD HD2 sing N N 382 LYS CD HD3 sing N N 383 LYS CE NZ sing N N 384 LYS CE HE2 sing N N 385 LYS CE HE3 sing N N 386 LYS NZ HZ1 sing N N 387 LYS NZ HZ2 sing N N 388 LYS NZ HZ3 sing N N 389 LYS OXT HXT sing N N 390 MET N CA sing N N 391 MET N H sing N N 392 MET N H2 sing N N 393 MET CA C sing N N 394 MET CA CB sing N N 395 MET CA HA sing N N 396 MET C O doub N N 397 MET C OXT sing N N 398 MET CB CG sing N N 399 MET CB HB2 sing N N 400 MET CB HB3 sing N N 401 MET CG SD sing N N 402 MET CG HG2 sing N N 403 MET CG HG3 sing N N 404 MET SD CE sing N N 405 MET CE HE1 sing N N 406 MET CE HE2 sing N N 407 MET CE HE3 sing N N 408 MET OXT HXT sing N N 409 ORP C1 O1 sing N N 410 ORP C1 C2 sing N N 411 ORP C1 O4 sing N N 412 ORP C1 H1 sing N N 413 ORP O1 HO1 sing N N 414 ORP C2 C3 sing N N 415 ORP C2 H21 sing N N 416 ORP C2 H22 sing N N 417 ORP C3 O3 sing N N 418 ORP C3 C4 sing N N 419 ORP C3 H3 sing N N 420 ORP O3 HO3 sing N N 421 ORP C4 O4 sing N N 422 ORP C4 C5 sing N N 423 ORP C4 H4 sing N N 424 ORP C5 O5 sing N N 425 ORP C5 H51 sing N N 426 ORP C5 H52 sing N N 427 ORP O5 P sing N N 428 ORP P O1P doub N N 429 ORP P O2P sing N N 430 ORP P O3P sing N N 431 ORP O2P HOP2 sing N N 432 ORP O3P HOP3 sing N N 433 PHE N CA sing N N 434 PHE N H sing N N 435 PHE N H2 sing N N 436 PHE CA C sing N N 437 PHE CA CB sing N N 438 PHE CA HA sing N N 439 PHE C O doub N N 440 PHE C OXT sing N N 441 PHE CB CG sing N N 442 PHE CB HB2 sing N N 443 PHE CB HB3 sing N N 444 PHE CG CD1 doub Y N 445 PHE CG CD2 sing Y N 446 PHE CD1 CE1 sing Y N 447 PHE CD1 HD1 sing N N 448 PHE CD2 CE2 doub Y N 449 PHE CD2 HD2 sing N N 450 PHE CE1 CZ doub Y N 451 PHE CE1 HE1 sing N N 452 PHE CE2 CZ sing Y N 453 PHE CE2 HE2 sing N N 454 PHE CZ HZ sing N N 455 PHE OXT HXT sing N N 456 PRO N CA sing N N 457 PRO N CD sing N N 458 PRO N H sing N N 459 PRO CA C sing N N 460 PRO CA CB sing N N 461 PRO CA HA sing N N 462 PRO C O doub N N 463 PRO C OXT sing N N 464 PRO CB CG sing N N 465 PRO CB HB2 sing N N 466 PRO CB HB3 sing N N 467 PRO CG CD sing N N 468 PRO CG HG2 sing N N 469 PRO CG HG3 sing N N 470 PRO CD HD2 sing N N 471 PRO CD HD3 sing N N 472 PRO OXT HXT sing N N 473 SER N CA sing N N 474 SER N H sing N N 475 SER N H2 sing N N 476 SER CA C sing N N 477 SER CA CB sing N N 478 SER CA HA sing N N 479 SER C O doub N N 480 SER C OXT sing N N 481 SER CB OG sing N N 482 SER CB HB2 sing N N 483 SER CB HB3 sing N N 484 SER OG HG sing N N 485 SER OXT HXT sing N N 486 THR N CA sing N N 487 THR N H sing N N 488 THR N H2 sing N N 489 THR CA C sing N N 490 THR CA CB sing N N 491 THR CA HA sing N N 492 THR C O doub N N 493 THR C OXT sing N N 494 THR CB OG1 sing N N 495 THR CB CG2 sing N N 496 THR CB HB sing N N 497 THR OG1 HG1 sing N N 498 THR CG2 HG21 sing N N 499 THR CG2 HG22 sing N N 500 THR CG2 HG23 sing N N 501 THR OXT HXT sing N N 502 TRP N CA sing N N 503 TRP N H sing N N 504 TRP N H2 sing N N 505 TRP CA C sing N N 506 TRP CA CB sing N N 507 TRP CA HA sing N N 508 TRP C O doub N N 509 TRP C OXT sing N N 510 TRP CB CG sing N N 511 TRP CB HB2 sing N N 512 TRP CB HB3 sing N N 513 TRP CG CD1 doub Y N 514 TRP CG CD2 sing Y N 515 TRP CD1 NE1 sing Y N 516 TRP CD1 HD1 sing N N 517 TRP CD2 CE2 doub Y N 518 TRP CD2 CE3 sing Y N 519 TRP NE1 CE2 sing Y N 520 TRP NE1 HE1 sing N N 521 TRP CE2 CZ2 sing Y N 522 TRP CE3 CZ3 doub Y N 523 TRP CE3 HE3 sing N N 524 TRP CZ2 CH2 doub Y N 525 TRP CZ2 HZ2 sing N N 526 TRP CZ3 CH2 sing Y N 527 TRP CZ3 HZ3 sing N N 528 TRP CH2 HH2 sing N N 529 TRP OXT HXT sing N N 530 TYR N CA sing N N 531 TYR N H sing N N 532 TYR N H2 sing N N 533 TYR CA C sing N N 534 TYR CA CB sing N N 535 TYR CA HA sing N N 536 TYR C O doub N N 537 TYR C OXT sing N N 538 TYR CB CG sing N N 539 TYR CB HB2 sing N N 540 TYR CB HB3 sing N N 541 TYR CG CD1 doub Y N 542 TYR CG CD2 sing Y N 543 TYR CD1 CE1 sing Y N 544 TYR CD1 HD1 sing N N 545 TYR CD2 CE2 doub Y N 546 TYR CD2 HD2 sing N N 547 TYR CE1 CZ doub Y N 548 TYR CE1 HE1 sing N N 549 TYR CE2 CZ sing Y N 550 TYR CE2 HE2 sing N N 551 TYR CZ OH sing N N 552 TYR OH HH sing N N 553 TYR OXT HXT sing N N 554 VAL N CA sing N N 555 VAL N H sing N N 556 VAL N H2 sing N N 557 VAL CA C sing N N 558 VAL CA CB sing N N 559 VAL CA HA sing N N 560 VAL C O doub N N 561 VAL C OXT sing N N 562 VAL CB CG1 sing N N 563 VAL CB CG2 sing N N 564 VAL CB HB sing N N 565 VAL CG1 HG11 sing N N 566 VAL CG1 HG12 sing N N 567 VAL CG1 HG13 sing N N 568 VAL CG2 HG21 sing N N 569 VAL CG2 HG22 sing N N 570 VAL CG2 HG23 sing N N 571 VAL OXT HXT sing N N 572 # _ndb_struct_conf_na.entry_id 4Z3A _ndb_struct_conf_na.feature 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DC 1 1_555 C DG 28 1_555 0.046 -0.178 0.408 0.302 -6.969 -4.713 1 C_DC1:DG28_D C 1 ? D 28 ? 19 1 1 B DA 2 1_555 C DT 27 1_555 -0.059 -0.092 0.155 6.818 -7.551 5.076 2 C_DA2:DT27_D C 2 ? D 27 ? 20 1 1 B DG 3 1_555 C DC 26 1_555 -0.499 -0.193 0.224 10.537 -8.794 0.857 3 C_DG3:DC26_D C 3 ? D 26 ? 19 1 1 B DC 4 1_555 C DG 25 1_555 0.401 -0.267 0.275 -1.537 -15.402 0.931 4 C_DC4:DG25_D C 4 ? D 25 ? 19 1 1 B DT 5 1_555 C DA 24 1_555 0.213 -0.195 -0.115 -0.629 -15.055 -1.633 5 C_DT5:DA24_D C 5 ? D 24 ? 20 1 1 B DC 6 1_555 C DG 23 1_555 0.011 -0.249 0.182 -8.110 -8.770 -2.134 6 C_DC6:DG23_D C 6 ? D 23 ? 19 1 1 B DT 7 1_555 C DA 22 1_555 0.003 -0.197 -0.113 -3.133 -10.063 -3.681 7 C_DT7:DA22_D C 7 ? D 22 ? 20 1 1 B DG 8 1_555 C DC 21 1_555 -0.478 -0.256 -0.188 -8.437 -4.919 -1.370 8 C_DG8:DC21_D C 8 ? D 21 ? 19 1 1 B DT 9 1_555 C DA 20 1_555 -0.217 -0.137 -0.056 -0.339 -7.538 0.120 9 C_DT9:DA20_D C 9 ? D 20 ? 20 1 1 B DA 10 1_555 C DT 19 1_555 0.072 -0.064 0.137 6.635 -10.294 3.138 10 C_DA10:DT19_D C 10 ? D 19 ? 20 1 1 B DC 11 1_555 C DG 18 1_555 0.438 -0.180 -0.337 14.282 -13.578 0.040 11 C_DC11:DG18_D C 11 ? D 18 ? 19 1 1 B DT 13 1_555 C DA 16 1_555 -0.269 -0.033 -0.043 -13.003 -12.057 2.646 12 C_DT13:DA16_D C 13 ? D 16 ? 20 1 1 B DG 14 1_555 C DC 15 1_555 -0.242 -0.203 -0.291 -4.362 -5.036 -0.278 13 C_DG14:DC15_D C 14 ? D 15 ? 19 1 1 B DA 15 1_555 C DT 14 1_555 0.069 -0.210 -0.057 2.143 -8.477 1.379 14 C_DA15:DT14_D C 15 ? D 14 ? 20 1 1 B DG 16 1_555 C DC 13 1_555 -0.067 -0.058 0.252 9.081 -9.921 3.681 15 C_DG16:DC13_D C 16 ? D 13 ? 19 1 1 B DC 17 1_555 C DG 12 1_555 0.282 -0.300 0.055 0.397 -16.240 -0.290 16 C_DC17:DG12_D C 17 ? D 12 ? 19 1 1 B DG 18 1_555 C DC 11 1_555 -0.313 -0.217 -0.194 -1.600 -8.371 -2.152 17 C_DG18:DC11_D C 18 ? D 11 ? 19 1 1 B DA 19 1_555 C DT 10 1_555 0.016 -0.138 -0.068 -2.968 -12.439 2.450 18 C_DA19:DT10_D C 19 ? D 10 ? 20 1 1 B DT 20 1_555 C DA 9 1_555 -0.051 -0.145 0.013 -1.434 -12.865 1.429 19 C_DT20:DA9_D C 20 ? D 9 ? 20 1 1 B DG 21 1_555 C DC 8 1_555 -0.238 -0.270 0.037 -1.948 -7.528 -1.363 20 C_DG21:DC8_D C 21 ? D 8 ? 19 1 1 B DG 22 1_555 C DC 7 1_555 -0.257 -0.226 -0.156 -4.655 -11.330 -0.329 21 C_DG22:DC7_D C 22 ? D 7 ? 19 1 1 B DA 23 1_555 C DT 6 1_555 0.274 -0.156 0.069 -2.398 -7.292 -3.590 22 C_DA23:DT6_D C 23 ? D 6 ? 20 1 1 B DC 24 1_555 C DG 5 1_555 0.250 -0.272 -0.095 6.209 -5.506 -1.956 23 C_DC24:DG5_D C 24 ? D 5 ? 19 1 1 B DA 25 1_555 C DT 4 1_555 -0.210 -0.231 -0.023 6.277 -8.250 -3.890 24 C_DA25:DT4_D C 25 ? D 4 ? 20 1 1 B DG 26 1_555 C DC 3 1_555 -0.225 -0.154 0.110 6.525 -8.785 -0.470 25 C_DG26:DC3_D C 26 ? D 3 ? 19 1 1 B DC 27 1_555 C DG 2 1_555 0.417 -0.245 0.275 -0.059 -12.814 -2.669 26 C_DC27:DG2_D C 27 ? D 2 ? 19 1 1 B DT 28 1_555 C DA 1 1_555 -0.078 -0.291 0.347 -5.088 -18.018 3.065 27 C_DT28:DA1_D C 28 ? D 1 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DC 1 1_555 C DG 28 1_555 B DA 2 1_555 C DT 27 1_555 0.694 0.139 3.108 5.796 -0.353 39.163 0.245 -0.368 3.173 -0.524 -8.589 39.574 1 CC_DC1DA2:DT27DG28_DD C 1 ? D 28 ? C 2 ? D 27 ? 1 B DA 2 1_555 C DT 27 1_555 B DG 3 1_555 C DC 26 1_555 -0.109 -0.157 3.252 -2.475 4.315 26.839 -1.400 -0.380 3.185 9.197 5.274 27.287 2 CC_DA2DG3:DC26DT27_DD C 2 ? D 27 ? C 3 ? D 26 ? 1 B DG 3 1_555 C DC 26 1_555 B DC 4 1_555 C DG 25 1_555 0.025 -0.554 3.510 -0.779 -0.093 41.042 -0.779 -0.126 3.510 -0.132 1.110 41.049 3 CC_DG3DC4:DG25DC26_DD C 3 ? D 26 ? C 4 ? D 25 ? 1 B DC 4 1_555 C DG 25 1_555 B DT 5 1_555 C DA 24 1_555 -0.368 -0.352 3.188 4.672 6.141 34.022 -1.481 1.294 3.006 10.332 -7.860 34.861 4 CC_DC4DT5:DA24DG25_DD C 4 ? D 25 ? C 5 ? D 24 ? 1 B DT 5 1_555 C DA 24 1_555 B DC 6 1_555 C DG 23 1_555 0.351 0.042 3.405 -1.045 4.752 39.092 -0.524 -0.650 3.376 7.069 1.554 39.382 5 CC_DT5DC6:DG23DA24_DD C 5 ? D 24 ? C 6 ? D 23 ? 1 B DC 6 1_555 C DG 23 1_555 B DT 7 1_555 C DA 22 1_555 -0.366 0.091 3.144 2.246 3.179 30.355 -0.430 1.120 3.102 6.039 -4.268 30.597 6 CC_DC6DT7:DA22DG23_DD C 6 ? D 23 ? C 7 ? D 22 ? 1 B DT 7 1_555 C DA 22 1_555 B DG 8 1_555 C DC 21 1_555 0.487 0.655 3.427 -0.189 5.933 38.215 0.213 -0.761 3.483 8.996 0.287 38.657 7 CC_DT7DG8:DC21DA22_DD C 7 ? D 22 ? C 8 ? D 21 ? 1 B DG 8 1_555 C DC 21 1_555 B DT 9 1_555 C DA 20 1_555 -0.234 -0.216 3.120 -0.688 3.769 28.584 -1.232 0.325 3.072 7.591 1.385 28.834 8 CC_DG8DT9:DA20DC21_DD C 8 ? D 21 ? C 9 ? D 20 ? 1 B DT 9 1_555 C DA 20 1_555 B DA 10 1_555 C DT 19 1_555 -0.087 0.706 3.156 -2.243 3.673 39.461 0.622 -0.128 3.206 5.420 3.310 39.686 9 CC_DT9DA10:DT19DA20_DD C 9 ? D 20 ? C 10 ? D 19 ? 1 B DA 10 1_555 C DT 19 1_555 B DC 11 1_555 C DG 18 1_555 0.060 0.046 3.075 4.472 -3.224 32.982 0.581 0.591 3.039 -5.630 -7.809 33.427 10 CC_DA10DC11:DG18DT19_DD C 10 ? D 19 ? C 11 ? D 18 ? 1 B DT 13 1_555 C DA 16 1_555 B DG 14 1_555 C DC 15 1_555 0.747 1.545 3.184 1.298 5.122 37.099 1.728 -0.992 3.383 8.000 -2.028 37.460 11 CC_DT13DG14:DC15DA16_DD C 13 ? D 16 ? C 14 ? D 15 ? 1 B DG 14 1_555 C DC 15 1_555 B DA 15 1_555 C DT 14 1_555 -0.802 0.481 3.165 -4.997 5.500 35.394 0.002 0.590 3.280 8.925 8.109 36.141 12 CC_DG14DA15:DT14DC15_DD C 14 ? D 15 ? C 15 ? D 14 ? 1 B DA 15 1_555 C DT 14 1_555 B DG 16 1_555 C DC 13 1_555 0.585 -0.170 3.178 -2.673 4.377 31.902 -1.050 -1.508 3.070 7.899 4.825 32.301 13 CC_DA15DG16:DC13DT14_DD C 15 ? D 14 ? C 16 ? D 13 ? 1 B DG 16 1_555 C DC 13 1_555 B DC 17 1_555 C DG 12 1_555 -1.145 -0.188 3.352 -0.727 -0.528 37.605 -0.222 1.678 3.375 -0.819 1.128 37.615 14 CC_DG16DC17:DG12DC13_DD C 16 ? D 13 ? C 17 ? D 12 ? 1 B DC 17 1_555 C DG 12 1_555 B DG 18 1_555 C DC 11 1_555 -0.092 0.655 3.407 3.502 10.321 32.793 -0.612 0.737 3.424 17.683 -6.000 34.510 15 CC_DC17DG18:DC11DG12_DD C 17 ? D 12 ? C 18 ? D 11 ? 1 B DG 18 1_555 C DC 11 1_555 B DA 19 1_555 C DT 10 1_555 0.095 -0.085 3.231 -2.143 6.134 39.598 -0.814 -0.380 3.174 8.981 3.137 40.107 16 CC_DG18DA19:DT10DC11_DD C 18 ? D 11 ? C 19 ? D 10 ? 1 B DA 19 1_555 C DT 10 1_555 B DT 20 1_555 C DA 9 1_555 -0.292 -0.533 3.210 -0.412 -0.034 28.752 -1.066 0.497 3.214 -0.069 0.829 28.754 17 CC_DA19DT20:DA9DT10_DD C 19 ? D 10 ? C 20 ? D 9 ? 1 B DT 20 1_555 C DA 9 1_555 B DG 21 1_555 C DC 8 1_555 0.727 0.756 3.320 1.292 3.989 35.185 0.638 -0.999 3.407 6.569 -2.128 35.426 18 CC_DT20DG21:DC8DA9_DD C 20 ? D 9 ? C 21 ? D 8 ? 1 B DG 21 1_555 C DC 8 1_555 B DG 22 1_555 C DC 7 1_555 -0.922 0.595 3.346 -2.428 4.092 36.825 0.366 1.110 3.441 6.445 3.824 37.120 19 CC_DG21DG22:DC7DC8_DD C 21 ? D 8 ? C 22 ? D 7 ? 1 B DG 22 1_555 C DC 7 1_555 B DA 23 1_555 C DT 6 1_555 -0.408 0.018 3.233 -3.872 0.353 37.717 -0.017 0.135 3.257 0.545 5.969 37.909 20 CC_DG22DA23:DT6DC7_DD C 22 ? D 7 ? C 23 ? D 6 ? 1 B DA 23 1_555 C DT 6 1_555 B DC 24 1_555 C DG 5 1_555 0.877 -0.368 3.139 1.184 0.836 30.759 -0.851 -1.429 3.159 1.575 -2.231 30.793 21 CC_DA23DC24:DG5DT6_DD C 23 ? D 6 ? C 24 ? D 5 ? 1 B DC 24 1_555 C DG 5 1_555 B DA 25 1_555 C DT 4 1_555 -0.296 0.509 3.364 0.905 5.243 35.180 0.039 0.622 3.394 8.613 -1.487 35.567 22 CC_DC24DA25:DT4DG5_DD C 24 ? D 5 ? C 25 ? D 4 ? 1 B DA 25 1_555 C DT 4 1_555 B DG 26 1_555 C DC 3 1_555 -0.348 -0.212 3.307 -3.910 5.834 33.792 -1.274 -0.027 3.245 9.903 6.637 34.493 23 CC_DA25DG26:DC3DT4_DD C 25 ? D 4 ? C 26 ? D 3 ? 1 B DG 26 1_555 C DC 3 1_555 B DC 27 1_555 C DG 2 1_555 0.053 -0.506 3.440 -1.270 3.338 32.539 -1.500 -0.323 3.369 5.935 2.258 32.729 24 CC_DG26DC27:DG2DC3_DD C 26 ? D 3 ? C 27 ? D 2 ? 1 B DC 27 1_555 C DG 2 1_555 B DT 28 1_555 C DA 1 1_555 0.134 -0.420 3.377 2.140 5.026 33.585 -1.541 0.121 3.284 8.626 -3.673 34.013 25 CC_DC27DT28:DA1DG2_DD C 27 ? D 2 ? C 28 ? D 1 ? # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number R01-GM72711 _pdbx_audit_support.ordinal 1 # _pdbx_entity_nonpoly.entity_id 4 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 4FNC _pdbx_initial_refinement_model.details ? #